Members
First name: Bénédicte Last name: Condamine Function: Bioinformatician Position: Engineer Email: benedicte.condamine aphp.fr |
Research interest
Escherichia coli, antibiotic resistance, virulence
Education
Degree
2013 Master Bioinformatique (University of Rouen)
2011 Licence Biochimie & Biologie Moléculaire (University of Rouen)
2011 Licence Biochimie & Biologie Moléculaire (University of Rouen)
Academic positions
2018-present : Bioinformatic Engineer at IAME, EVRest
2015-2017 : Bioinformatic Engineer at Hybrigenics
2013-2014 : Bioinformatic Engineer at Biogemma
2011-2013 : Sandwich course at Genoscreen
2015-2017 : Bioinformatic Engineer at Hybrigenics
2013-2014 : Bioinformatic Engineer at Biogemma
2011-2013 : Sandwich course at Genoscreen
List of the main publications
Jacquier H, Assao B, Chau F, Guindo O, Condamine B, Magnan M, Bridier-Nahmias A, Sayingoza-Makombe N, Moumouni A, Page AL, Langendorf C, Coldiron ME, Denamur E, de Lastours V
Faecal carriage of extended-spectrum β-lactamase-producing Escherichia coli in a remote region of Niger.
The Journal of Infection 2023, 87, 199-209.
Burgaya J, Marin J, Royer G, Condamine B, Gachet B, Clermont O, Jaureguy F, Burdet C, Lefort A, de Lastours V, Denamur E, Galardini M, Blanquart F, Colibafi/Septicoli & Coliville groups
The bacterial genetic determinants of Escherichia coli capacity to cause bloodstream infections in humans.
PLoS genetics 2023, 19, e1010842.
Petitjean M, Condamine B, Burdet C, Denamur E, Ruppé E
Phylum barrier and Escherichia coli intra-species phylogeny drive the acquisition of antibiotic-resistance genes.
Microbial Genomics 2021
Clermont O, Condamine B, Dion S, Gordon DM, Denamur E
The E phylogroup of Escherichia coli is highly diverse and mimics the whole E. coli species population structure.
Environmental Microbiology 2021, 23, 7139-7151.
Clermont O, Dixit OVA, Vangchhia B, Condamine B, Dion S, Bridier-Nahmias A, Denamur E, Gordon D
Characterization and rapid identification of phylogroup G in Escherichia coli, a lineage with high virulence and antibiotic resistance potential.
Environmental Microbiology 2019, 21, 3107-3117.
Faecal carriage of extended-spectrum β-lactamase-producing Escherichia coli in a remote region of Niger.
The Journal of Infection 2023, 87, 199-209.
Burgaya J, Marin J, Royer G, Condamine B, Gachet B, Clermont O, Jaureguy F, Burdet C, Lefort A, de Lastours V, Denamur E, Galardini M, Blanquart F, Colibafi/Septicoli & Coliville groups
The bacterial genetic determinants of Escherichia coli capacity to cause bloodstream infections in humans.
PLoS genetics 2023, 19, e1010842.
Petitjean M, Condamine B, Burdet C, Denamur E, Ruppé E
Phylum barrier and Escherichia coli intra-species phylogeny drive the acquisition of antibiotic-resistance genes.
Microbial Genomics 2021
Clermont O, Condamine B, Dion S, Gordon DM, Denamur E
The E phylogroup of Escherichia coli is highly diverse and mimics the whole E. coli species population structure.
Environmental Microbiology 2021, 23, 7139-7151.
Clermont O, Dixit OVA, Vangchhia B, Condamine B, Dion S, Bridier-Nahmias A, Denamur E, Gordon D
Characterization and rapid identification of phylogroup G in Escherichia coli, a lineage with high virulence and antibiotic resistance potential.
Environmental Microbiology 2019, 21, 3107-3117.
Exhaustive list of publications
2024
Sokal A, Royer G, Esposito-Farese M, Clermont O, Condamine B, Laouénan C, Lefort A, Denamur E, de Lastours V, Colibafi, Septicoli and Coliville Groups
Clinical and bacteriological specificities of Escherichia coli bloodstream infections from biliary portal of entries.
The Journal of Infectious Diseases 2024, jiad586.
d'Humières C, Delavy M, Alla L, Ichou F, Gauliard E, Ghozlane A, Levenez F, Galleron N, Quinquis B, Pons N, Mullaert J, Bridier-Nahmias A, Condamine B, Touchon M, Rainteau D, Lamazière A, Lesnik P, Ponnaiah M, Lhomme M, Sertour N, Devente S, Docquier JD, Bougnoux ME, Tenaillon O, Magnan M, Ruppé E, Grall N, Duval X, Ehrlich D, Mentré F, Denamur E, Rocha EPC, Le Chatelier E, Burdet C, PrediRes study group
Perturbation and resilience of the gut microbiome up to 3 months after β-lactams exposure in healthy volunteers suggest an important role of microbial β-lactamases.
Microbiome 2024, 12, 50.
2023
Jacquier H, Assao B, Chau F, Guindo O, Condamine B, Magnan M, Bridier-Nahmias A, Sayingoza-Makombe N, Moumouni A, Page AL, Langendorf C, Coldiron ME, Denamur E, de Lastours V
Faecal carriage of extended-spectrum β-lactamase-producing Escherichia coli in a remote region of Niger.
The Journal of Infection 2023, 87, 199-209.
Royer G, Clermont O, Marin J, Condamine B, Dion S, Blanquart F, Galardini M, Denamur E
Epistatic interactions between the high pathogenicity island and other iron uptake systems shape Escherichia coli extra-intestinal virulence.
Nature Communications 2023, 14, 3667.
Allain M, Mahérault AC, Gachet B, Martinez C, Condamine B, Magnan M, Kempf I, Denamur E, Landraud L
Dissemination of IncI plasmid encoding bla CTX-M-1 is not hampered by its fitness cost in the pig's gut.
Antimicrobial Agents and Chemotherapy 2023, 67, e0011123.
Burgaya J, Marin J, Royer G, Condamine B, Gachet B, Clermont O, Jaureguy F, Burdet C, Lefort A, de Lastours V, Denamur E, Galardini M, Blanquart F, Colibafi/Septicoli & Coliville groups
The bacterial genetic determinants of Escherichia coli capacity to cause bloodstream infections in humans.
PLoS genetics 2023, 19, e1010842.
2022
Royer G, Clermont O, Condamine B, Mercier-Darty M, Laouénan C, Lefort A, Denamur E, de Lastours V, COLIBAFI and SEPTICOLI Groups
O-Antigen Targeted Vaccines Against Escherichia coli May Be Useful in Reducing Morbidity, Mortality, and Antimicrobial Resistance.
Clinical Infectious Diseases: An Official Publication of the Infectious Diseases Society of America 2022, 74, 364-366.
Su WL, Bredèche MF, Dion S, Dauverd J, Condamine B, Gutierrez A, Denamur E, Matic I
TisB Protein Protects Escherichia coli Cells Suffering Massive DNA Damage from Environmental Toxic Compounds.
mBio 2022, 13, e0038522.
Denamur E, Condamine B, Esposito-Farèse M, Royer G, Clermont O, Laouenan C, Lefort A, de Lastours V, Galardini M, COLIBAFI, SEPTICOLI groups
Genome wide association study of Escherichia coli bloodstream infection isolates identifies genetic determinants for the portal of entry but not fatal outcome.
PLoS genetics 2022, 18, e1010112.
2021
Petitjean M, Condamine B, Burdet C, Denamur E, Ruppé E
Phylum barrier and Escherichia coli intra-species phylogeny drive the acquisition of antibiotic-resistance genes.
Microbial Genomics 2021
Clermont O, Condamine B, Dion S, Gordon DM, Denamur E
The E phylogroup of Escherichia coli is highly diverse and mimics the whole E. coli species population structure.
Environmental Microbiology 2021, 23, 7139-7151.
Massot M, Châtre P, Condamine B, Métayer V, Clermont O, Madec JY, Denamur E, Haenni M
Interplay between Bacterial Clones and Plasmids in the Spread of Antibiotic Resistance Genes in the Gut: Lessons from a Temporal Study in Veal Calves.
Applied and Environmental Microbiology 2021, 87, e0135821.
Royer G, Darty MM, Clermont O, Condamine B, Laouenan C, Decousser JW, Vallenet D, Lefort A, de Lastours V, Denamur E, COLIBAFI and SEPTICOLI groups
Phylogroup stability contrasts with high within sequence type complex dynamics of Escherichia coli bloodstream infection isolates over a 12-year period.
Genome Medicine 2021, 13, 77.
2019
Clermont O, Dixit OVA, Vangchhia B, Condamine B, Dion S, Bridier-Nahmias A, Denamur E, Gordon D
Characterization and rapid identification of phylogroup G in Escherichia coli, a lineage with high virulence and antibiotic resistance potential.
Environmental Microbiology 2019, 21, 3107-3117.
Billard-Pomares T, Clermont O, Castellanos M, Magdoud F, Royer G, Condamine B, Fouteau S, Barbe V, Roche D, Cruveiller S, Médigue C, Pognard D, Glodt J, Dion S, Rigal O, Picard B, Denamur E, Branger C
The Arginine Deiminase Operon Is Responsible for a Fitness Trade-Off in Extended-Spectrum-β-Lactamase-Producing Strains of Escherichia coli.
Antimicrobial Agents and Chemotherapy 2019, 63,