EVRest main publications


Ruppé E, Ghozlane A, Tap J, Pons N, Alvarez AS, Maziers N, Cuesta T, Hernando-Amado S, Clares I, Martínez JL, Coque TM, Baquero F, Lanza VF, Máiz L, Goulenok T, de Lastours V, Amor N, Fantin B, Wieder I, Andremont A, van Schaik W, Rogers M, Zhang X, Willems RJL, de Brevern AG, Batto JM, Blottière HM, Léonard P, Léjard V, Letur A, Levenez F, Weiszer K, Haimet F, Doré J, Kennedy SP, Ehrlich SD
Prediction of the intestinal resistome by a three-dimensional structure-based method.
Nature Microbiology 2019, 4, 112-123.

Branger C, Ledda A, Billard-Pomares T, Doublet B, Barbe V, Roche D, Médigue C, Arlet G, Denamur E
Specialization of small non-conjugative plasmids in Escherichia coli according to their family types.
Microbial Genomics 2019

de Gunzburg J, Ghozlane A, Ducher A, Le Chatelier E, Duval X, Ruppé E, Armand-Lefevre L, Sablier-Gallis F, Burdet C, Alavoine L, Chachaty E, Augustin V, Varastet M, Levenez F, Kennedy S, Pons N, Mentré F, Andremont A
Protection of the Human Gut Microbiome From Antibiotics.
The Journal of Infectious Diseases 2018, 217, 628-636.

Berleur M, Guérin F, Massias L, Chau F, Poujade J, Cattoir V, Fantin B, de Lastours V
Activity of fosfomycin alone or combined with temocillin in vitro and in a murine model of peritonitis due to KPC-3- or OXA-48-producing Escherichia coli.
The Journal of Antimicrobial Chemotherapy 2018, 73, 3074-3080.

Dufour N, Delattre R, Ricard JD, Debarbieux L
The Lysis of Pathogenic Escherichia coli by Bacteriophages Releases Less Endotoxin Than by β-Lactams.
Clinical Infectious Diseases: An Official Publication of the Infectious Diseases Society of America 2017, 64, 1582-1588.

Birgy A, Delecourt M, Geslain G, Desselas E, Caseris M, Magnan M, Mariani-Kurkdjian P, Bidet P, Bonacorsi S
A combination of mecillinam and amoxicillin/clavulanate can restore susceptibility of high-level TEM-1-producing Escherichia coli to mecillinam.
The Journal of Antimicrobial Chemotherapy 2017, 72, 1911-1914.

Skurnik D, Clermont O, Guillard T, Launay A, Danilchanka O, Pons S, Diancourt L, Lebreton F, Kadlec K, Roux D, Jiang D, Dion S, Ashard H, Denamur M, Cywes-Bentley C, Schwarz S, Tenaillon O, Andremont A, Picard B, Mekalanos J, Brisse S, Denamur E
Emergence of Antimicrobial-Resistant Escherichia coli of Animal Origin Spreading in Humans.
Molecular Biology and Evolution 2016, 33, 898.

Soysal N, Mariani-Kurkdjian P, Smail Y, Liguori S, Gouali M, Loukiadis E, Fach P, Bruyand M, Blanco J, Bidet P, Bonacorsi S
Enterohemorrhagic Escherichia coli Hybrid Pathotype O80:H2 as a New Therapeutic Challenge.
Emerging Infectious Diseases 2016, 22, 1604-1612.

Ruppé E, Armand-Lefèvre L, Estellat C, Consigny PH, El Mniai A, Boussadia Y, Goujon C, Ralaimazava P, Campa P, Girard PM, Wyplosz B, Vittecoq D, Bouchaud O, Le Loup G, Pialoux G, Perrier M, Wieder I, Moussa N, Esposito-Farèse M, Hoffmann I, Coignard B, Lucet JC, Andremont A, Matheron S
High Rate of Acquisition but Short Duration of Carriage of Multidrug-Resistant Enterobacteriaceae After Travel to the Tropics.
Clinical Infectious Diseases: An Official Publication of the Infectious Diseases Society of America 2015, 61, 593-600.

Roux D, Danilchanka O, Guillard T, Cattoir V, Aschard H, Fu Y, Angoulvant Y, Messika J, Ricard J, Mekalanos J, Lory S, Pier G, Skurnik D
Fitness cost of antibiotic susceptibility during bacterial infection.
Science Translational Medecine 2015, 22, 297.

de Lastours V, Bleibtreu A, Chau F, Burdet C, Duval X, Denamur E, Fantin B
Quinolone-resistant Escherichia coli from the faecal microbiota of healthy volunteers after ciprofloxacin exposure are highly adapted to a commensal lifestyle.
The Journal of Antimicrobial Chemotherapy 2014, 69, 761-768.

Bleibtreu A, Clermont O, Darlu P, Glodt J, Branger C, Picard B, Denamur E
The rpoS gene is predominantly inactivated during laboratory storage and undergoes source-sink evolution in Escherichia coli species.
Journal of Bacteriology 2014, 196, 4276-4284.

EVRest exhaustive list of publications


(click to expand or collapse)

 2020                                                                            

Birgand G, Schouten J, Ruppé E
Less contact isolation is more in the ICU: con.
Intensive Care Medicine 2020

Timsit JF, Ruppé E, Barbier F, Tabah A, Bassetti M
Bloodstream infections in critically ill patients: an expert statement.
Intensive Care Medicine 2020, 46, 266-284.

Sonneville R, Mazighi M, Bresson D, Crassard I, Crozier S, de Montmollin E, Degos V, Faugeras F, Gayat E, Josse L, Lamy C, Magalhaes E, Maldjian A, Ruckly S, Servan J, Vassel P, Vigué B, Timsit JF, Woimant F, Si
Outcomes of Acute Stroke Patients Requiring Mechanical Ventilation: Study Protocol for the SPICE Multicenter Prospective Observational Study.
Neurocritical Care 2020

Peiffer-Smadja N, Dellière S, Rodriguez C, Birgand G, Lescure FX, Fourati S, Ruppé E
Machine learning in the clinical microbiology laboratory: has the time come for routine practice?.
Clinical Microbiology and Infection: The Official Publication of the European Society of Clinical Microbiology and Infectious Diseases 2020

Kohlhauer M, Boissady E, Lidouren F, de Rochefort L, Nadeau M, Rambaud J, Hutin A, Dubuisson RM, Guillot G, Pey P, Bruneval P, Fortin-Pellerin E, Sage M, Walti H, Cariou A, Ricard JD, Berdeaux A, Mongardon N, Ghaleh B, Micheau P, Tissier R
A new paradigm for lung-conservative total liquid ventilation.
EBioMedicine 2020, 52, 102365.

Mizrahi A, Delerue T, Morel H, Le Monnier A, Carbonnelle E, Pilmis B, Zahar JR, obtSJSG
Infections caused by naturally AmpC-producing Enterobacteriaceae: Can we use third-generation cephalosporins? A narrative review.
International Journal of Antimicrobial Agents 2020, 55, 105834.

Benchetrit L, Mathy V, Armand-Lefevre L, Bouadma L, Timsit JF
Successful treatment of septic shock due to NDM-1-producing Klebsiella pneumoniae using ceftazidime/avibactam combined with aztreonam in solid organ transplant recipients: report of two cases.
International Journal of Antimicrobial Agents 2020, 55, 105842.

Bonnin RA, Bernabeu S, Jaureguy F, Naas T, Dortet L
MCR-8 mediated colistin resistance in a carbapenem-resistant Klebsiella pneumoniae isolated from a repatriated patient from Morocco.
International Journal of Antimicrobial Agents 2020, 105920.

Royer G, Fourreau F, Boulanger B, Mercier-Darty M, Ducellier D, Cizeau F, Potron A, Podglajen I, Mongardon N, Decousser JW
Local outbreak of extended-spectrum β-lactamase SHV2a-producing Pseudomonas aeruginosa reveals the emergence of a new specific sub-lineage of the international ST235 high-risk clone.
The Journal of Hospital Infection 2020, 104, 33-39.

Coppry M, Leroyer C, Saly M, Venier AG, Slekovec C, Bertrand X, Parer S, Alfandari S, Cambau E, Megarbane B, Lawrence C, Clair B, Lepape A, Cassier P, Trivier D, Boyer A, Boulestreau H, Asselineau J, Dubois V, Thiébaut R, Rogues AM
Exogenous acquisition of Pseudomonas aeruginosa in intensive care units: a prospective multi-centre study (DYNAPYO study).
The Journal of Hospital Infection 2020, 104, 40-45.

Jolivet S, Lolom I, Bailly S, Bouadma L, Lortat-Jacob B, Montravers P, Armand-Lefevre L, Timsit JF, Lucet JC
Impact of colonisation pressure on acquisition of extended-spectrum β-lactamase-producing Enterobacteriaceae and meticillin-resistant Staphylococcus aureus in two intensive care units: a 19-year retrospective surveillance.
The Journal of Hospital Infection 2020

de Lastours V, Poirel L, Huttner B, Harbarth S, Denamur E, Nordmann P
Emergence of colistin-resistant Gram-negative Enterobacterales in the gut of patients receiving oral colistin and neomycin decontamination.
The Journal of Infection 2020

Lopes A, Mougari F, Chopin D, Pogliaghi M, Munier AL, Delcey V, Simoneau G, Raskine L, Evans J, Mouly S, Cambau E, Bergmann JF, Sellier P
Prospective study comparing the conventional and same-day strategies to diagnose pulmonary tuberculosis.
Medecine Et Maladies Infectieuses 2020, 50, 36-42.

Lampros A, Montardi C, Journeau L, Georgin-Lavialle S, Hanslik T, Dhôte R, Goujard C, Le Jeunne C, Mahe I, Papo T, Godeau B, Bourgarit A, Fain O, Fantin B, Dzierzynski N, Leblanc J, Nevoret C, Steichen O
[Association between psychiatric comorbidities and hospital length of stay in post-emergency internal medicine patients].
La Revue De Medecine Interne 2020

Vodovar D, Ricard JD, Zafrani L, Weiss E, Desrentes E, Roux D
[Assessment of a newly-implemented blended teaching of intensive care and emergency medicine at Paris-Diderot University].
La Revue De Medecine Interne 2020

Hobson CA, Bonacorsi S, Hocquet D, Baruchel A, Fahd M, Storme T, Tang R, Doit C, Tenaillon O, Birgy A
Impact of anticancer chemotherapy on the extension of beta-lactamase spectrum: an example with KPC-type carbapenemase activity towards ceftazidime-avibactam.
Scientific Reports 2020, 10, 589.

Jacquier H, Vironneau P, Dang H, Verillaud B, Lamers G, Herman P, Vicaut E, Tessier N, Bidet P, Varon E, Van Den Abbeele T, Cambau E, Bercot B, Kania R
Bacterial biofilm in adenoids of children with chronic otitis media. Part II: a case-control study of nasopharyngeal microbiota, virulence, and resistance of biofilms in adenoids.
Acta Oto-Laryngologica 2020, 1-5.

Messika J, Boussard N, Guérin C, Michel F, Nseir S, Yonis H, Barbier CM, Rouzé A, Fouilloux V, Gaudry S, Ricard JD, Silverman H, Dreyfuss D
Strengths of the French end-of-life Law as Well as its Shortcomings in Handling Intractable Disputes Between Physicians and Families.
The New Bioethics: A Multidisciplinary Journal of Biotechnology and the Body 2020, 1-22.

Woerther PL, Royer G, Decousser JW, Fihman V, Lepeule R
Emergence of Resistance to Carbapenems Should not be considered as the only Marker of Good Practices in Antibiotic Stewardship.
Clinical Infectious Diseases: An Official Publication of the Infectious Diseases Society of America 2020

Levy C, Varon E, Ouldali N, Béchet S, Bonacorsi S, Cohen R
Changes in Invasive Pneumococcal Disease Spectrum After 13-Valent Pneumococcal Conjugate Vaccine Implementation.
Clinical Infectious Diseases: An Official Publication of the Infectious Diseases Society of America 2020, 70, 446-454.

Chilton CH, Crowther GS, Miossec C, de Gunzburg J, Andremont A, Wilcox MH
Investigation of the effect of the adsorbent DAV131A on the propensity of moxifloxacin to induce simulated Clostridioides (Clostridium) difficile infection (CDI) in an in vitro human gut model.
The Journal of Antimicrobial Chemotherapy 2020

Birgy A, Madhi F, Jung C, Levy C, Cointe A, Bidet P, Hobson CA, Bechet S, Sobral E, Vuthien H, Ferroni A, Aberrane S, Cuzon G, Beraud L, Gajdos V, Launay E, Pinquier D, Haas H, Desmarest M, Dommergues MA, Cohen R, Bonacorsi S, GotNOoUtIdtEpEic
Diversity and trends in population structure of ESBL-producing Enterobacteriaceae in febrile urinary tract infections in children in France from 2014 to 2017.
The Journal of Antimicrobial Chemotherapy 2020, 75, 96-105.

Tanaka S, Genève C, Zappella N, Yong-Sang J, Planesse C, Louedec L, Viranaïcken W, Bringart M, Montravers P, Denamur E, Duranteau J, Couret D, Meilhac O
Reconstituted High-density Lipoprotein Therapy Improves Survival in Mouse Models of Sepsis.
Anesthesiology 2020

Chaudhuri D, Granton D, Wang DX, Einav S, Helviz Y, Mauri T, Ricard JD, Mancebo J, Frat JP, Jog S, Hernandez G, Maggiore SM, Hodgson C, Jaber S, Brochard L, Burns KEA, Rochwerg B
Moderate Certainty Evidence Suggests the Use of High-Flow Nasal Cannula Does Not Decrease Hypoxia When Compared With Conventional Oxygen Therapy in the Peri-Intubation Period: Results of a Systematic Review and Meta-Analysis.
Critical Care Medicine 2020

Gits-Muselli M, Villiers S, Hamane S, Berçot B, Donay JL, Denis B, Guigue N, Alanio A, Bretagne S
Time to and differential time to blood culture positivity for assessing catheter-related yeast fungaemia: A longitudinal, 7-year study in a single university hospital.
Mycoses 2020, 63, 95-103.

Herrou J, De Lastours V
Predictive factors of pneumocystis pneumonia in patients with rheumatic diseases exposed to prolonged high-dose glucocorticoids.
Annals of the Rheumatic Diseases 2020, 79, e23.

Lafaurie M, d'Anglejan E, Donay JL, Glotz D, Sarfati E, Mimoun M, Legrand M, Oksenhendler E, Bagot M, Valade S, Bercot B, Molina JM
Utility of anaerobic bottles for the diagnosis of bloodstream infections.
BMC infectious diseases 2020, 20, 142.

Dubert M, Visseaux B, Birgy A, Mordant P, Metivier AC, Dauriat G, Fidouh N, Yazdanpanah Y, Grall N, Castier Y, Mal H, Thabut G, Lescure FX
Late viral or bacterial respiratory infections in lung transplanted patients: impact on respiratory function.
BMC infectious diseases 2020, 20, 176.

Contou D, Coudroy R, Colin G, Tadié JM, Cour M, Sonneville R, Mekontso Dessap A, de Prost N, HSG
Pneumococcal purpura fulminans in asplenic or hyposplenic patients: a French multicenter exposed-unexposed retrospective cohort study.
Critical Care (London, England) 2020, 24, 68.

Blet A, de Roquetaillade C, Hartmann O, Struck J, Mebazaa A, Chousterman BG, A1si
Added value of serial bio-adrenomedullin measurement in addition to lactate for the prognosis of septic patients admitted to ICU.
Critical Care (London, England) 2020, 24, 69.

Lecronier M, Tashk P, Tamzali Y, Tenaillon O, Denamur E, Barrou B, Aron-Wisnewsky J, Tourret J
Gut microbiota composition alterations are associated with the onset of diabetes in kidney transplant recipients.
PloS One 2020, 15, e0227373.

Nguyen Y, Stirnemann J, Lautredoux F, Cador B, Bengherbia M, Yousfi K, Hamroun D, Astudillo L, Billette de Villemeur T, Brassier A, Camou F, Dalbies F, Dobbelaere D, Gaches F, Leguy-Seguin V, Masseau A, Pers YM, Pichard S, Serratrice C, Berger MG, Fantin B, Belmatoug N, On Behalf Of The French Evaluation Of Gaucher Disease Treatment Committee n
Immunoglobulin Abnormalities in Gaucher Disease: an Analysis of 278 Patients Included in the French Gaucher Disease Registry.
International Journal of Molecular Sciences 2020, 21,

Joseph A, Cointe A, Mariani Kurkdjian P, Rafat C, Hertig A
Shiga Toxin-Associated Hemolytic Uremic Syndrome: A Narrative Review.
Toxins 2020, 12,

Lerolle N, Laanani M, Galicier L, Rivière S, Meynard JL, Azoulay E, Jeblaoui A, Lalande V, Mougari F, Fardet L, Coppo P, Goujard C, Molina JM, Lambotte O
Factors associated with tuberculosis-associated haemophagocytic syndrome: a multicentre case-control study.
The International Journal of Tuberculosis and Lung Disease: The Official Journal of the International Union Against Tuberculosis and Lung Disease 2020, 24, 124-130.

 2019                                                                            

Timsit JF, Bassetti M, Cremer O, Daikos G, de Waele J, Kallil A, Kipnis E, Kollef M, Laupland K, Paiva JA, Rodríguez-Baño J, Ruppé É, Salluh J, Taccone FS, Weiss E, Barbier F
Rationalizing antimicrobial therapy in the ICU: a narrative review.
Intensive Care Medicine 2019, 45, 172-189.

Levy M, Bonacorsi S, Naudin J, Caseris M, Thebault E, Mariani-Kurkdjian P, Chomton M, Sommet J, Dauger S, Doit C
Multidrug-resistant bacterial carriage and related healthcare-associated infections in a pediatric intensive care unit: a 6-year prospective study.
Intensive Care Medicine 2019, 45, 1037-1039.

Ricard JD, Gregoretti C
Nasal high-flow preoxygenation for endotracheal intubation in the critically ill patient? Pro.
Intensive Care Medicine 2019, 45, 529-531.

Martin-Loeches I, Torres A, Povoa P, Zampieri FG, Salluh J, Nseir S, Ferrer M, Rodriguez A, TsG
The association of cardiovascular failure with treatment for ventilator-associated lower respiratory tract infection.
Intensive Care Medicine 2019, 45, 1753-1762.

Miailhe AF, Mercier E, Maamar A, Lacherade JC, Le Thuaut A, Gaultier A, Asfar P, Argaud L, Ausseur A, Ben Salah A, Botoc V, Chaoui K, Charpentier J, Cracco C, De Prost N, Eustache ML, Ferré A, Gauvin E, Goursaud S, Grall M, Guiot P, Jonas M, Lambiotte F, Landais M, Lemarié J, Lesieur O, Lhommet C, Michel P, Monseau Y, Moschietto S, Nseir S, Osman D, Pillot J, Piton G, Sedillot N, Sirodot M, Thevenin D, Zafrani L, Zerbib Y, Bourhy P, Lascarrou JB, Reignier J, L
Severe leptospirosis in non-tropical areas: a nationwide, multicentre, retrospective study in French ICUs.
Intensive Care Medicine 2019, 45, 1763-1773.

Blot S, Antonelli M, Arvaniti K, Blot K, Creagh-Brown B, de Lange D, De Waele J, Deschepper M, Dikmen Y, Dimopoulos G, Eckmann C, Francois G, Girardis M, Koulenti D, Labeau S, Lipman J, Lipovestky F, Maseda E, Montravers P, Mikstacki A, Paiva JA, Pereyra C, Rello J, Timsit JF, Vogelaers D, ASS(gobotTGotESoICM
Epidemiology of intra-abdominal infection and sepsis in critically ill patients: "AbSeS", a multinational observational cohort study and ESICM Trials Group Project.
Intensive Care Medicine 2019, 45, 1703-1717.

Nicolas-Chanoine MH, Vigan M, Laouénan C, Robert J, “cSG
Risk factors for carbapenem-resistant Enterobacteriaceae infections: a French case-control-control study.
European Journal of Clinical Microbiology & Infectious Diseases: Official Publication of the European Society of Clinical Microbiology 2019, 38, 383-393.

Ong DSY, Zapf TC, Cevik M, Palacios-Baena ZR, Barać A, Cimen C, Maraolo AE, Rönnberg C, Cambau E, Poljak M, TAotESoCMaID(
Current mentorship practices in the training of the next generation of clinical microbiology and infectious disease specialists: an international cross-sectional survey.
European Journal of Clinical Microbiology & Infectious Diseases: Official Publication of the European Society of Clinical Microbiology 2019, 38, 659-665.

Delerue T, Cordel H, Delerue T, Figoni J, Dziri S, Billard-Pomares T, Bouchaud O, Carbonnelle E, Zahar JR
Prediction of methicillin-resistant Staphylococcus aureus bloodstream infection: do we need rapid diagnostic tests?.
European Journal of Clinical Microbiology & Infectious Diseases: Official Publication of the European Society of Clinical Microbiology 2019, 38, 1319-1326.

Frerot A, Baud O, Colella M, Taibi L, Bonacorsi S, Alberti C, Mohamed D, Biran V
Cord blood procalcitonin level and early-onset sepsis in extremely preterm infants.
European Journal of Clinical Microbiology & Infectious Diseases: Official Publication of the European Society of Clinical Microbiology 2019, 38, 1651-1657.

Cointe A, de Ponfilly GP, Munier AL, Bachir M, Benmansour H, Crémieux AC, Forien M, Frazier A, Krief E, Cambau E, Jacquier H
Native joint septic arthritis due to Clostridium tarantellae.
Anaerobe 2019, 56, 46-48.

Atallah S, Berçot B, Laurence V, Hoffmann C
Association of Mycoplasma Hominis and head and neck cancer with unknown primary.
European Annals of Otorhinolaryngology, Head and Neck Diseases 2019

Carrie C, Walewski V, Levy C, Alexandre C, Baleine J, Charreton C, Coche-Monier B, Caeymaex L, Lageix F, Lorrot M, Klosowski S, Hess L, Zafer O, Gaudelus J, Pinquier D, Carbonnelle E, Cohen R, de Pontual L
Klebsiella pneumoniae and Klebsiella oxytoca meningitis in infants. Epidemiological and clinical features.
Archives De Pediatrie: Organe Officiel De La Societe Francaise De Pediatrie 2019, 26, 12-15.

de Tymowski C, Heming N, Correia MDT, Abbad L, Chavarot N, Le Stang MB, Flament H, Bex J, Boedec E, Bounaix C, Soler-Torronteras R, Denamur E, Galicier L, Oksenhendler E, Fehling HJ, Pinheiro da Silva F, Benhamou M, Monteiro RC, Ben Mkaddem S
CD89 Is a Potent Innate Receptor for Bacteria and Mediates Host Protection from Sepsis.
Cell Reports 2019, 27, 762-775.e5.

Maataoui N, Mayet A, Duron S, Delacour H, Mentré F, Laouenan C, Desvillechabrol D, Cokelaer T, Meynard JB, Ducher A, Andremont A, Armand-Lefèvre L, Mérens A
High acquisition rate of extended-spectrum β-lactamase-producing Enterobacteriaceae among French military personnel on mission abroad, without evidence of inter-individual transmission.
Clinical Microbiology and Infection: The Official Publication of the European Society of Clinical Microbiology and Infectious Diseases 2019, 25, 631.e1-631.e9.

Basmaci R, Deschamps K, Levy C, Mathy V, Corrard F, Thollot F, Béchet S, Sobral E, Bidet P, Cohen R, Bonacorsi S
Prevalence of Kingella kingae oropharyngeal carriage and predominance of type a and type b polysaccharide capsules among French young children.
Clinical Microbiology and Infection: The Official Publication of the European Society of Clinical Microbiology and Infectious Diseases 2019, 25, 114-116.

Huttner BD, de Lastours V, Wassenberg M, Maharshak N, Mauris A, Galperine T, Zanichelli V, Kapel N, Bellanger A, Olearo F, Duval X, Armand-Lefevre L, Carmeli Y, Bonten M, Fantin B, Harbarth S, RGWsg
A 5-day course of oral antibiotics followed by faecal transplantation to eradicate carriage of multidrug-resistant Enterobacteriaceae: a randomized clinical trial.
Clinical Microbiology and Infection: The Official Publication of the European Society of Clinical Microbiology and Infectious Diseases 2019, 25, 830-838.

Amarsy R, Guéret D, Benmansour H, Flicoteaux R, Berçot B, Meunier F, Mougari F, Jacquier H, Pean de Ponfilly G, Clermont O, Denamur E, Teixeira A, Cambau E
Determination of Escherichia coli phylogroups in elderly patients with urinary tract infection or asymptomatic bacteriuria.
Clinical Microbiology and Infection: The Official Publication of the European Society of Clinical Microbiology and Infectious Diseases 2019, 25, 839-844.

Royer G, Melloul E, Roisin L, Courbin V, Jacquier H, Lepeule R, Coutte L, Darty M, Fihman V, Lim P, Decousser JW, Rodriguez C, Woerther PL
Complete genome sequencing of Enterococcus faecalis strains suggests role of Ebp deletion in infective endocarditis relapse.
Clinical Microbiology and Infection: The Official Publication of the European Society of Clinical Microbiology and Infectious Diseases 2019, 25, 1565-1567.

Fantin B, Poujade J, Grégoire N, Chau F, Roujansky A, Kieffer N, Berleur M, Couet W, Nordmann P
The inoculum effect of Escherichia coli expressing mcr-1 or not on colistin activity in a murine model of peritonitis.
Clinical Microbiology and Infection: The Official Publication of the European Society of Clinical Microbiology and Infectious Diseases 2019, 25, 1563.e5-1563.e8.

Ruppé E, Cherkaoui A, Charretier Y, Girard M, Schicklin S, Lazarevic V, Schrenzel J
From genotype to antibiotic susceptibility phenotype in the order Enterobacterales: a clinical perspective.
Clinical Microbiology and Infection: The Official Publication of the European Society of Clinical Microbiology and Infectious Diseases 2019

Cambau E, Poljak M
Sniffing animals as a diagnostic tool in infectious diseases.
Clinical Microbiology and Infection: The Official Publication of the European Society of Clinical Microbiology and Infectious Diseases 2019

Berbescu S, Matt M, Dinh A, Simeon S, Noussair L, Armand-Lefevre L, Davido B
Successful treatment of meningococcal bacteremia using oral doxycycline: a case report.
International journal of infectious diseases: IJID: official publication of the International Society for Infectious Diseases 2019

Mauri T, Carlesso E, Spinelli E, Turrini C, Corte FD, Russo R, Ricard JD, Pesenti A, Roca O, Grasselli G
Increasing support by nasal high flow acutely modifies the ROX index in hypoxemic patients: A physiologic study.
Journal of Critical Care 2019, 53, 183-185.

Bouziane F, Allem R, Sebaihia M, Kumanski S, Mougari F, Sougakoff W, Raskine L, Yala D, Cambau E, CM
First genetic characterisation of multidrug-resistant Mycobacterium tuberculosis isolates from Algeria.
Journal of Global Antimicrobial Resistance 2019, 19, 301-307.

Saliba R, Neulier C, Seytre D, Fiacre A, Faibis F, Leduc P, Amara M, Jauréguy F, Carbonnelle E, Zahar JR, Marty L
Can real-time polymerase chain reaction allow a faster recovery of hospital activity in cases of an incidental discovery of carbapenemase-producing Enterobacteriaceae and vancomycin-resistant Enterococci carriers?.
Journal of Hospital Infection 2019, 103, 115-120.

Pilmis B, Billard-Pomares T, Martin M, Clarempuy C, Lemezo C, Saint-Marc C, Bourlon N, Seytre D, Carbonnelle E, Zahar JR
Can we explain environmental contamination by particular traits associated with patients?.
The Journal of Hospital Infection 2019

Sokal A, Sauvanet A, Fantin B, de Lastours V
Acute cholangitis: Diagnosis and management.
Journal of Visceral Surgery 2019

Ville S, Ydee A, Garandeau C, Canet E, Tissot A, Cantarovich D, Frémeaux-Bacchi V, Mariani-Kurkdjian P, Provôt F, Fakhouri F
Shiga toxin-producing Escherichia coli-associated hemolytic uremic syndrome in solid organ transplant recipients.
Kidney International 2019, 96, 1423-1424.

Hoen B, Varon E, de Debroucker T, Fantin B, Grimprel E, Wolff M, Duval X, earg
Management of acute community-acquired bacterial meningitis (excluding newborns). Long version with arguments.
Medecine Et Maladies Infectieuses 2019, 49, 405-441.

Gocko X, Lenormand C, Lemogne C, Bouiller K, Gehanno JF, Rabaud C, Perrot S, Eldin C, de Broucker T, Roblot F, Toubiana J, Sellal F, Vuillemet F, Sordet C, Fantin B, Lina G, Sobas C, Jaulhac B, Figoni J, Chirouze C, Hansmann Y, Hentgen V, Caumes E, Dieudonné M, Picone O, Bodaghi B, Gangneux JP, Degeilh B, Partouche H, Saunier A, Sotto A, Raffetin A, Monsuez JJ, Michel C, Boulanger N, Cathebras P, Tattevin P, ebtfss
Lyme borreliosis and other tick-borne diseases. Guidelines from the French scientific societies.
Medecine Et Maladies Infectieuses 2019, 49, 296-317.

Delchier JC, Bastuji-Garin S, Raymond J, Megraud F, Amiot A, Cambau E, Burucoa C, HSG
Efficacy of a tailored PCR-guided triple therapy in the treatment of Helicobacter pylori infection.
Medecine Et Maladies Infectieuses 2019

Ruppé E, Schrenzel J
Messages from the third International Conference on Clinical Metagenomics (ICCMg3).
Microbes and Infection 2019

De Stefano C, Akodad H, Gauducheau H, Reuter PG, Ricard JD, Petrovic T, Adnet F, Truchot J, Lapostolle F
Role of Student Nurse in the Prehospital Medical Teams Responding to the Scene of A Terrorist Attack in France.
Nursing Outlook 2019, 67, 441-449.

Philippon A, Jacquier H, Ruppé E, Labia R
Structure-based classification of class A beta-lactamases, an update.
Current Research in Translational Medicine 2019, 67, 115-122.

Pistone T, Ouattara E, Gabillard D, Lele N, Duvignaud A, Cordel H, Malvy D, Bouchaud O, Abgrall S, AVSG
Travel-related health events and their risk factors in HIV-infected sub-Saharan migrants living in France and visiting their native country: The ANRS VIHVO cohort study.
Travel Medicine and Infectious Disease 2019, 29, 40-47.

Billard-Pomares T, Bleibtreu A, Walewski V, Dziri S, Barbat A, Zahar JR, Cruaud P, Carbonnelle E
Proposition of a safe Mycobacterium tuberculosis complex denaturation method that does not compromise the integrity of DNA for whole-genome sequencing.
Tuberculosis 2019, 117, 62-64.

Frat JP, Ricard JD, Quenot JP, Pichon N, Demoule A, Forel JM, Mira JP, Coudroy R, Berquier G, Voisin B, Colin G, Pons B, Danin PE, Devaquet J, Prat G, Clere-Jehl R, Petitpas F, Vivier E, Razazi K, Nay MA, Souday V, Dellamonica J, Argaud L, Ehrmann S, Gibelin A, Girault C, Andreu P, Vignon P, Dangers L, Ragot S, Thille AW, F2sg, Rn
Non-invasive ventilation versus high-flow nasal cannula oxygen therapy with apnoeic oxygenation for preoxygenation before intubation of patients with acute hypoxaemic respiratory failure: a randomised, multicentre, open-label trial.
The Lancet. Respiratory Medicine 2019, 7, 303-312.

Vincent A, Bonacorsi S, Varon E, Dauger S, Levy M
Serotype 14 pneumococcal bacteremia: From one neonate to another in a pediatric intensive care unit.
Infection Control and Hospital Epidemiology 2019, 40, 952-953.

Kingston C, Wallace MA, Allentoff AJ, deGruyter JN, Chen JS, Gong SX, Bonacorsi S, Baran PS
Direct Carbon Isotope Exchange through Decarboxylative Carboxylation.
Journal of the American Chemical Society 2019, 141, 774-779.

Ruppé E, Ghozlane A, Tap J, Pons N, Alvarez AS, Maziers N, Cuesta T, Hernando-Amado S, Clares I, Martínez JL, Coque TM, Baquero F, Lanza VF, Máiz L, Goulenok T, de Lastours V, Amor N, Fantin B, Wieder I, Andremont A, van Schaik W, Rogers M, Zhang X, Willems RJL, de Brevern AG, Batto JM, Blottière HM, Léonard P, Léjard V, Letur A, Levenez F, Weiszer K, Haimet F, Doré J, Kennedy SP, Ehrlich SD
Prediction of the intestinal resistome by a three-dimensional structure-based method.
Nature Microbiology 2019, 4, 112-123.

d'Humières C, Touchon M, Dion S, Cury J, Ghozlane A, Garcia-Garcera M, Bouchier C, Ma L, Denamur E, P C Rocha E
A simple, reproducible and cost-effective procedure to analyse gut phageome: from phage isolation to bioinformatic approach.
Scientific Reports 2019, 9, 11331.

Kania R, Vironneau P, Dang H, Bercot B, Cambau E, Verillaud B, Camous D, Lamers G, Herman P, Vicaut E, Tessier N, Van Den Abbeele T
Bacterial biofilm in adenoids of children with chronic otitis media. Part I: a case control study of prevalence of biofilms in adenoids, risk factors and middle ear biofilms.
Acta Oto-Laryngologica 2019, 139, 345-350.

Leo S, Lazarevic V, Gaïa N, Estellat C, Girard M, Matheron S, Armand-Lefèvre L, Andremont A, Schrenzel J, Ruppé E
The intestinal microbiota predisposes to traveler's diarrhea and to the carriage of multidrug-resistant Enterobacteriaceae after traveling to tropical regions.
Gut Microbes 2019, 10, 631-641.

Gardette M, Le Hello S, Mariani-Kurkdjian P, Fabre L, Gravey F, Garrivier A, Loukiadis E, Jubelin G
Identification and prevalence of in vivo-induced genes in enterohaemorrhagic Escherichia coli.
Virulence 2019, 10, 180-193.

Canouï E, Zarrouk V, Canouï-Poitrine F, Desmoulin U, Leflon V, Allaham W, de Lastours V, Guigui P, Fantin B
Surgery is safe and effective when indicated in the acute phase of hematogenous pyogenic vertebral osteomyelitis.
Infectious Diseases (London, England) 2019, 51, 268-276.

Pourbaix A, Zarrouk V, Allaham W, Leflon V, Rousseau MA, Goutagny S, Guigui P, Fantin B
More complications in cervical than in non-cervical spine tuberculosis.
Infectious Diseases (London, England) 2019, 1-7.

Mansour W, Grami R, Jaidane N, Messaoudi A, Charfi K, Ben Romdhane L, Bel Haj Khalifa A, Khedher M, Boujaafar N, Bouallègue O, Mammeri H
Epidemiology and Whole-Genome Analysis of NDM-1-Producing Klebsiella pneumoniae KP3771 from Tunisia.
Microbial Drug Resistance (Larchmont, N.Y.) 2019, 25, 644-651.

Logre E, Denamur E, Mammeri H
Contribution to Carbapenem Resistance and Fitness Cost of DcuS/DcuR, RcsC/RcsB, and YehU/YehT Two-Component Systems in CTX-M-15-Producing Escherichia coli.
Microbial Drug Resistance (Larchmont, N.Y.) 2019

Augustin P, Tanaka S, Tran-Dinh A, Ribeiro LP, Arapis K, Grall N, Qarni AA, Montravers P
Outcome and Adequacy of Empirical Antibiotherapy in Post-Operative Peritonitis: A Retrospective Study.
Surgical Infections 2019

Royer G, Fourreau F, Gomart C, Maurand A, Hacquin B, Ducellier D, Cizeau F, Lo S, Cordonnier-Jourdin C, Mercier-Darty M, Decousser JW
Outbreak of an uncommon rifampicin resistant blaNDM-1Citrobacter amalonaticus strain in a digestive rehabilitation center: the putative role of rifaximin.
Clinical Infectious Diseases: An Official Publication of the Infectious Diseases Society of America 2019

Dinh A, Hallouin-Bernard MC, Davido B, Lemaignen A, Bouchand F, Duran C, Even A, Denys P, Perrouin-Verbe B, Sotto A, Lavigne JP, Bruyère F, Grall N, Tavernier E, Bernard L
Weekly sequential antibioprophylaxis for recurrent UTI among patients with neurogenic bladder: a randomized controlled trial.
Clinical Infectious Diseases: An Official Publication of the Infectious Diseases Society of America 2019

Alexandre K, Soares A, Chau F, Fantin B, Caron F, Etienne M
Temocillin breakpoints in pyelonephritis: evaluation in a murine model due to ESBL-producing Escherichia coli clinical isolates.
The Journal of Antimicrobial Chemotherapy 2019, 74, 1323-1326.

Bourrel AS, Poirel L, Royer G, Darty M, Vuillemin X, Kieffer N, Clermont O, Denamur E, Nordmann P, Decousser JW, IRG
Colistin resistance in Parisian inpatient faecal Escherichia coli as the result of two distinct evolutionary pathways.
The Journal of Antimicrobial Chemotherapy 2019, 74, 1521-1530.

Ouldali N, Cohen R, Levy C, Gelbert-Baudino N, Seror E, Corrard F, Vie Le Sage F, Michot AS, Romain O, Bechet S, Bonacorsi S, Angoulvant F, Varon E
Pneumococcal susceptibility to antibiotics in carriage: a 17 year time series analysis of the adaptive evolution of non-vaccine emerging serotypes to a new selective pressure environment.
The Journal of Antimicrobial Chemotherapy 2019, 74, 3077-3086.

Melo LC, Haenni M, Saras E, Duprilot M, Nicolas-Chanoine MH, Madec JY
Emergence of the C1-M27 cluster in ST131 Escherichia coli from companion animals in France.
The Journal of Antimicrobial Chemotherapy 2019, 74, 3111-3113.

Peiffer-Smadja N, Guillotel E, Luque-Paz D, Maataoui N, Lescure FX, Cattoir V
In vitro bactericidal activity of amoxicillin combined with different cephalosporins against endocarditis-associated Enterococcus faecalis clinical isolates.
The Journal of Antimicrobial Chemotherapy 2019, 74, 3511-3514.

Cointe A, Birgy A, Bridier-Nahmias A, Mariani-Kurkdjian P, Walewski V, Lévy C, Cohen R, Fach P, Delannoy S, Bidet P, Bonacorsi S
Escherichia coli O80 hybrid pathotype strains producing Shiga toxin and ESBL: molecular characterization and potential therapeutic options.
The Journal of Antimicrobial Chemotherapy 2019

Maataoui N, Langendorf C, Berthe F, Bayjanov JR, van Schaik W, Isanaka S, Grais RF, Clermont O, Andremont A, Armand-Lefèvre L, Woerther PL
Increased risk of acquisition and transmission of ESBL-producing Enterobacteriaceae in malnourished children exposed to amoxicillin.
The Journal of Antimicrobial Chemotherapy 2019

Jung C, Amhis J, Levy C, Salabi V, Nacera B, Samia R, Bidet P, Aberrane S, Bonacorsi S, Cohen R
Group A Streptococcal Paronychia and Blistering Distal Dactylitis in Children: Diagnostic Accuracy of a Rapid Diagnostic Test and Efficacy of Antibiotic Treatment.
Journal of the Pediatric Infectious Diseases Society 2019

Toubiana J, Azarnoush S, Bouchez V, Landier A, Guillot S, Matczak S, Bonacorsi S, Brisse S
Bordetella parapertussis Bacteremia: Clinical Expression and Bacterial Genomics.
Open Forum Infectious Diseases 2019, 6, ofz122.

Pham T, Serpa Neto A, Pelosi P, Laffey JG, De Haro C, Lorente JA, Bellani G, Fan E, Brochard LJ, Pesenti A, Schultz MJ, Artigas A, LSIatESoICMTG
Outcomes of Patients Presenting with Mild Acute Respiratory Distress Syndrome: Insights from the LUNG SAFE Study.
Anesthesiology 2019, 130, 263-283.

La Combe B, Ricard JD
Chlorhexidine Inefficacy in Ventilated Patients: Reply.
Anesthesiology 2019, 131, 939-940.

Cantier M, Sabben C, Adle-Biassette H, Louedec L, Delbosc S, Desilles JP, Journé C, Diallo D, Ou P, Klein I, Chau F, Lefort A, Iung B, Duval X, Olivot JM, Ho-Tin-Noe B, Michel JB, Sonneville R, Mazighi M
Neurologic Complications of Infective Endocarditis: A Joint Model for a Septic Thromboembolism and Inflammatory Small Vessel Disease.
Critical Care Medicine 2019, 47, e685-e692.

Chosidow A, Bonacorsi S, Moissenet D, Bidet P, Schnuriger A, Grimprel E, Vialle R, Lorrot M
Recurrent Acute Septic Arthritis Caused by Kingella kingae in a 16-Month-Old Boy.
The Pediatric Infectious Disease Journal 2019, 38, e270-e271.

Branger C, Ledda A, Billard-Pomares T, Doublet B, Barbe V, Roche D, Médigue C, Arlet G, Denamur E
Specialization of small non-conjugative plasmids in Escherichia coli according to their family types.
Microbial Genomics 2019

Clermont O, Dixit OVA, Vangchhia B, Condamine B, Dion S, Bridier-Nahmias A, Denamur E, Gordon D
Characterization and rapid identification of phylogroup G in Escherichia coli, a lineage with high virulence and antibiotic resistance potential.
Environmental Microbiology 2019, 21, 3107-3117.

Mediamolle N, Mallet C, Aupiais C, Doit C, Ntika S, Vialle R, Grimprel E, Pejin Z, Bonacorsi S, Lorrot M
Bone and joint infections in infants under three months of age.
Acta Paediatrica (Oslo, Norway: 1992) 2019, 108, 933-939.

Dufour N, Delattre R, Chevallereau A, Ricard JD, Debarbieux L
Phage Therapy of Pneumonia Is Not Associated with an Overstimulation of the Inflammatory Response Compared to Antibiotic Treatment in Mice.
Antimicrobial Agents and Chemotherapy 2019, 63,

Birgy A, Levy C, Nicolas-Chanoine MH, Cointe A, Hobson CA, Magnan M, Bechet S, Bidet P, Cohen R, Bonacorsi S
Independent Host Factors and Bacterial Genetic Determinants of the Emergence and Dominance of Escherichia coli Sequence Type 131 CTX-M-27 in a Community Pediatric Cohort Study.
Antimicrobial Agents and Chemotherapy 2019, 63,

Billard-Pomares T, Clermont O, Castellanos M, Magdoud F, Royer G, Condamine B, Fouteau S, Barbe V, Roche D, Cruveiller S, Médigue C, Pognard D, Glodt J, Dion S, Rigal O, Picard B, Denamur E, Branger C
The Arginine Deiminase Operon Is Responsible for a Fitness Trade-Off in Extended-Spectrum-β-Lactamase-Producing Strains of Escherichia coli.
Antimicrobial Agents and Chemotherapy 2019, 63,

Burdet C, Nguyen TT, Duval X, Ferreira S, Andremont A, Guedj J, Mentré F, DC1SG
Impact of Antibiotic Gut Exposure on the Temporal Changes in Microbiome Diversity.
Antimicrobial Agents and Chemotherapy 2019, 63,

Pourbaix A, Guérin F, Burdet C, Massias L, Chau F, Cattoir V, Fantin B
Unexpected Activity of Oral Fosfomycin against Resistant Strains of Escherichia coli in Murine Pyelonephritis.
Antimicrobial Agents and Chemotherapy 2019, 63,

Kieffer N, Royer G, Decousser JW, Bourrel AS, Palmieri M, Ortiz De La Rosa JM, Jacquier H, Denamur E, Nordmann P, Poirel L
mcr-9, an Inducible Gene Encoding an Acquired Phosphoethanolamine Transferase in Escherichia coli, and Its Origin.
Antimicrobial Agents and Chemotherapy 2019, 63,

Mahérault AC, Kemble H, Magnan M, Gachet B, Roche D, Le Nagard H, Tenaillon O, Denamur E, Branger C, Landraud L
Advantage of the F2:A1:B- IncF Pandemic Plasmid over IncC Plasmids in In Vitro Acquisition and Evolution of blaCTX-M Gene-Bearing Plasmids in Escherichia coli.
Antimicrobial Agents and Chemotherapy 2019, 63,

Saint-Lu N, Burdet C, Sablier-Gallis F, Corbel T, Nevière A, Sayah-Jeanne S, Pulse M, Weiss W, Ferreira S, Andremont A, Mentré F, de Gunzburg J
DAV131A Protects Hamsters from Lethal Clostridioides difficile Infection Induced by Fluoroquinolones.
Antimicrobial Agents and Chemotherapy 2019, 64,

Burdet C, Grall N, Linard M, Bridier-Nahmias A, Benhayoun M, Bourabha K, Magnan M, Clermont O, d'Humières C, Tenaillon O, Denamur E, Massias L, Tubiana S, Alavoine L, Andremont A, Mentré F, Duval X, CG
Ceftriaxone and Cefotaxime Have Similar Effects on the Intestinal Microbiota in Human Volunteers Treated by Standard-Dose Regimens.
Antimicrobial Agents and Chemotherapy 2019, 63,

Nowrouzian FL, Clermont O, Edin M, Östblom A, Denamur E, Wold AE, Adlerberth I
Escherichia coli B2 Phylogenetic Subgroups in the Infant Gut Microbiota: Predominance of Uropathogenic Lineages in Swedish Infants and Enteropathogenic Lineages in Pakistani Infants.
Applied and Environmental Microbiology 2019, 85,

Caméléna F, Birgy A, Smail Y, Courroux C, Mariani-Kurkdjian P, Le Hello S, Bonacorsi S, Bidet P
Rapid and Simple Universal Escherichia coli Genotyping Method Based on Multiple-Locus Variable-Number Tandem-Repeat Analysis Using Single-Tube Multiplex PCR and Standard Gel Electrophoresis.
Applied and Environmental Microbiology 2019, 85,

Pouletty M, De Pontual L, Lopez M, Morin L, Poilane I, Pham LL, Carbonnelle E, Titomanlio L, Faye A, Bonacorsi S
Multiplex PCR reveals a high prevalence of multiple pathogens in traveller's diarrhoea in children.
Archives of Disease in Childhood 2019, 104, 141-146.

Garnier M, Gallah S, Vimont S, Benzerara Y, Labbe V, Constant AL, Siami S, Guerot E, Compain F, Mainardi JL, Montil M, Quesnel C, BCsg
Multicentre randomised controlled trial to investigate usefulness of the rapid diagnostic βLACTA test performed directly on bacterial cell pellets from respiratory, urinary or blood samples for the early de-escalation of carbapenems in septic intensive care unit patients: the BLUE-CarbA protocol.
BMJ open 2019, 9, e024561.

Vuillard C, Dib F, Achamlal J, Gaudry S, Roux D, Chemouny M, Javaud N, Dreyfuss D, Ricard JD, Messika J
Longer symptom onset to aspiration time predicts success of needle aspiration in primary spontaneous pneumothorax.
Thorax 2019, 74, 780-786.

Roca O, Caralt B, Messika J, Samper M, Sztrymf B, Hernández G, García-de-Acilu M, Frat JP, Masclans JR, Ricard JD
An Index Combining Respiratory Rate and Oxygenation to Predict Outcome of Nasal High-Flow Therapy.
American Journal of Respiratory and Critical Care Medicine 2019, 199, 1368-1376.

Gaudry S, Quenot JP, Hertig A, Barbar SD, Hajage D, Ricard JD, Dreyfuss D
Timing of Renal Replacement Therapy for Severe Acute Kidney Injury in Critically Ill Patients.
American Journal of Respiratory and Critical Care Medicine 2019, 199, 1066-1075.

Roca O, Caralt B, Ricard JD
Reply to Tatkov, to Karim and Esquinas, and to Tulaimat.
American Journal of Respiratory and Critical Care Medicine 2019, 200, 117-119.

Guimarães-Costa R, Niérat MC, Rivals I, Morélot-Panzini C, Romero NB, Menegaux F, Salachas F, Gonzalez-Bermejo J, Similowski T, Bruneteau G, Rt
Implanted Phrenic Stimulation Impairs Local Diaphragm Myofiber Reinnervation in Amyotrophic Lateral Sclerosis.
American Journal of Respiratory and Critical Care Medicine 2019, 200, 1183-1187.

Gaudry S, Quenot JP, Hertig A, Barbar SD, Hajage D, Ricard JD, Dreyfuss D
Reply to Chousterman et al.: Delaying Renal Replacement Therapy Could Be Harmful in Patients with Acute Brain Injury.
American Journal of Respiratory and Critical Care Medicine 2019, 200, 646-647.

Guimarães-Costa R, Similowski T, Rivals I, Morélot-Panzini C, Nierat MC, Bui MT, Akbar D, Straus C, Romero NB, Michel PP, Menegaux F, Salachas F, Gonzalez-Bermejo J, Bruneteau G, Rt, cttRsw
Human diaphragm atrophy in amyotrophic lateral sclerosis is not predicted by routine respiratory measures.
The European Respiratory Journal 2019, 53,

Messika J, Martin Y, Maquigneau N, Puechberty C, Henry-Lagarrigue M, Stoclin A, Panneckouke N, Villard S, Dechanet A, Lafourcade A, Dreyfuss D, Hajage D, Ricard JD, MIt, MII
A musical intervention for respiratory comfort during noninvasive ventilation in the ICU.
The European Respiratory Journal 2019, 53,

Geslain G, Birgy A, Adiba S, Magnan M, Courroux C, Levy C, Cohen R, Bidet P, Bonacorsi S
Genome sequencing of strains of the most prevalent clonal group of O1:K1:H7 Escherichia coli that causes neonatal meningitis in France.
BMC microbiology 2019, 19, 17.

Genuini M, Bidet P, Benoist JF, Schlemmer D, Lemaitre C, Birgy A, Bonacorsi S
ShiF acts as an auxiliary factor of aerobactin secretion in meningitis Escherichia coli strain S88.
BMC microbiology 2019, 19, 298.

Vermee Q, Cohen R, Hays C, Varon E, Bonacorsi S, Bechet S, Thollot F, Corrard F, Poyart C, Levy C, Raymond J
Biofilm production by Haemophilus influenzae and Streptococcus pneumoniae isolated from the nasopharynx of children with acute otitis media.
BMC infectious diseases 2019, 19, 44.

Arangalage D, Abtan J, Gaschignard J, Ceccaldi PF, Remini SA, Etienne I, Ruszniewski P, Plaisance P, De Lastours V, Lefort A, Faye A
Implementation of a large-scale simulation-based cardiovascular clinical examination course for undergraduate medical students - a pilot study.
BMC medical education 2019, 19, 361.

Lascarrou JB, Dumas F, Bougouin W, Chocron R, Beganton F, Legriel S, Aissaoui N, Deye N, Lamhaut L, Jost D, Vieillard-Baron A, Marijon E, Jouven X, Cariou A, S
Temporal trends in the use of targeted temperature management after cardiac arrest and association with outcome: insights from the Paris Sudden Death Expertise Centre.
Critical Care (London, England) 2019, 23, 391.

Gaudry S, Hajage D, Martin-Lefevre L, Louis G, Moschietto S, Titeca-Beauport D, La Combe B, Pons B, de Prost N, Besset S, Combes A, Robine A, Beuzelin M, Badie J, Chevrel G, Reignier J, Bohé J, Coupez E, Chudeau N, Barbar S, Vinsonneau C, Forel JM, Thevenin D, Boulet E, Lakhal K, Aissaoui N, Grange S, Leone M, Lacave G, Nseir S, Poirson F, Mayaux J, Asehnoune K, Geri G, Klouche K, Thiery G, Argaud L, Ricard JD, Quenot JP, Dreyfuss D
The Artificial Kidney Initiation in Kidney Injury 2 (AKIKI2): study protocol for a randomized controlled trial.
Trials 2019, 20, 726.

Papazian L, Aubron C, Brochard L, Chiche JD, Combes A, Dreyfuss D, Forel JM, Guérin C, Jaber S, Mekontso-Dessap A, Mercat A, Richard JC, Roux D, Vieillard-Baron A, Faure H
Formal guidelines: management of acute respiratory distress syndrome.
Annals of Intensive Care 2019, 9, 69.

Tanaka S, Diallo D, Delbosc S, Genève C, Zappella N, Yong-Sang J, Patche J, Harrois A, Hamada S, Denamur E, Montravers P, Duranteau J, Meilhac O
High-density lipoprotein (HDL) particle size and concentration changes in septic shock patients.
Annals of Intensive Care 2019, 9, 68.

Balmier A, Dib F, Serret-Larmande A, De Montmollin E, Pouyet V, Sztrymf B, Megarbane B, Thiagarajah A, Dreyfuss D, Ricard JD, Roux D
Initial management of diabetic ketoacidosis and prognosis according to diabetes type: a French multicentre observational retrospective study.
Annals of Intensive Care 2019, 9, 91.

Zingg W, Storr J, Park BJ, Ahmad R, Tarrant C, Castro-Sanchez E, Tomczyk S, Kilpatrick C, Allegranzi B, Cardo D, Pittet D, 2GITT
Implementation research for the prevention of antimicrobial resistance and healthcare-associated infections; 2017 Geneva infection prevention and control (IPC)-think tank (part 1).
Antimicrobial Resistance and Infection Control 2019, 8, 87.

Zingg W, Storr J, Park BJ, Jernigan JA, Harbarth S, Grayson ML, Tacconelli E, Allegranzi B, Cardo D, Pittet D, 2GITT
Broadening the infection prevention and control network globally; 2017 Geneva IPC-think tank (part 3).
Antimicrobial Resistance and Infection Control 2019, 8, 74.

Zingg W, Park BJ, Storr J, Ahmad R, Tarrant C, Castro-Sanchez E, Perencevich E, Widmer A, Krause KH, Kilpatrick C, Tomczyk S, Allegranzi B, Cardo D, Pittet D, 2GITT
Technology for the prevention of antimicrobial resistance and healthcare-associated infections; 2017 Geneva IPC-Think Tank (Part 2).
Antimicrobial Resistance and Infection Control 2019, 8, 83.

Levy C, Varon E, Ouldali N, Wollner A, Thollot F, Corrard F, Werner A, Béchet S, Bonacorsi S, Cohen R
Bacterial causes of otitis media with spontaneous perforation of the tympanic membrane in the era of 13 valent pneumococcal conjugate vaccine.
PloS One 2019, 14, e0211712.

Kolenda C, Monteix A, Houhamdi L, Preynat-Boucher P, Giannoli JM, Escuret V, Laurent F, Morfin F
Do liquid wastes from automated instruments in medical laboratories have their proper microbicide effect?.
Annales De Biologie Clinique 2019, 77, 295-305.

Jones G, Lefèvre S, Donguy MP, Nisavanh A, Terpant G, Fougère E, Vaissière E, Guinard A, Mailles A, de Valk H, Fila M, Tanné C, Le Borgne C, Weill FX, Bonacorsi S, Jourdan-Da Silva N, Mariani-Kurkdjian P
Outbreak of Shiga toxin-producing Escherichia coli (STEC) O26 paediatric haemolytic uraemic syndrome (HUS) cases associated with the consumption of soft raw cow's milk cheeses, France, March to May 2019.
Euro Surveillance: Bulletin Europeen Sur Les Maladies Transmissibles = European Communicable Disease Bulletin 2019, 24,

Poncin T, Merimeche M, Braille A, Mainardis M, Bebear C, Jacquier H, Berçot B
Two cases of multidrug-resistant Neisseria gonorrhoeae related to travel in south-eastern Asia, France, June 2019.
Euro Surveillance: Bulletin Europeen Sur Les Maladies Transmissibles = European Communicable Disease Bulletin 2019, 24,

Ndeikoundam Ngangro N, Viriot D, Fournet N, Pioche C, De Barbeyrac B, Goubard A, Dupin N, Berçot B, Fouéré S, Alcaraz I, Ohayon M, Spenatto N, Vernay-Vaisse C, Pillonel J, Lot F, RftrootFnpha
Bacterial sexually transmitted infections in France: recent trends and patients' characteristics in 2016.
Euro Surveillance: Bulletin Europeen Sur Les Maladies Transmissibles = European Communicable Disease Bulletin 2019, 24,

Bruyand M, Mariani-Kurkdjian P, Le Hello S, King LA, Van Cauteren D, Lefevre S, Gouali M, Jourdan-da Silva N, Mailles A, Donguy MP, Loukiadis E, Sergentet-Thevenot D, Loirat C, Bonacorsi S, Weill FX, De Valk H, RFHdSdSP
Paediatric haemolytic uraemic syndrome related to Shiga toxin-producing Escherichia coli, an overview of 10 years of surveillance in France, 2007 to 2016.
Euro Surveillance: Bulletin Europeen Sur Les Maladies Transmissibles = European Communicable Disease Bulletin 2019, 24,

Jannic A, Mammeri H, Larcher L, Descamps V, Tosini W, Phung B, Yazdanpanah Y, Bouscarat F
Orogenital Transmission of Neisseria meningitidis Causing Acute Urethritis in Men Who Have Sex with Men.
Emerging Infectious Diseases 2019, 25, 175-176.

La Combe B, Clermont O, Messika J, Eveillard M, Kouatchet A, Lasocki S, Corvec S, Lakhal K, Billard-Pomares T, Fernandes R, Armand-Lefevre L, Bourdon S, Reignier J, Fihman V, de Prost N, Bador J, Goret J, Wallet F, Denamur E, Ricard JD, Cg, CG
Pneumonia-Specific Escherichia coli with Distinct Phylogenetic and Virulence Profiles, France, 2012-2014.
Emerging Infectious Diseases 2019, 25, 710-718.

Decalonne M, Lecorche E, Hau E, Petiteau A, Moreau C, Milan O, Lanotte P, Mereghetti L, Cambau E, van der Mee-Marquet N
Cause Analysis of an Infection in Facelift Surgery Due to Mycobacterium chelonae.
Frontiers in Medicine 2019, 6, 243.

Flament-Simon SC, Duprilot M, Mayer N, García V, Alonso MP, Blanco J, Nicolas-Chanoine MH
Association Between Kinetics of Early Biofilm Formation and Clonal Lineage in Escherichia coli.
Frontiers in Microbiology 2019, 10, 1183.

Dupouy V, Abdelli M, Moyano G, Arpaillange N, Bibbal D, Cadiergues MC, Lopez-Pulin D, Sayah-Jeanne S, de Gunzburg J, Saint-Lu N, Gonzalez-Zorn B, Andremont A, Bousquet-Mélou A
Prevalence of Beta-Lactam and Quinolone/Fluoroquinolone Resistance in Enterobacteriaceae From Dogs in France and Spain-Characterization of ESBL/pAmpC Isolates, Genes, and Conjugative Plasmids.
Frontiers in Veterinary Science 2019, 6, 279.

Messika J, Ricard JD
High-Flow Nasal Oxygen Therapy Outside the Intensive Care Setting: How Safe Is Safe Enough?.
Respiratory Care 2019, 64, 1447-1449.

 2018                                                                            

Guérin C, Beuret P, Constantin JM, Bellani G, Garcia-Olivares P, Roca O, Meertens JH, Maia PA, Becher T, Peterson J, Larsson A, Gurjar M, Hajjej Z, Kovari F, Assiri AH, Mainas E, Hasan MS, Morocho-Tutillo DR, Baboi L, Chrétien JM, François G, Ayzac L, Chen L, Brochard L, Mercat A, iotASGtRNtRrdlSFdR(ratETG
A prospective international observational prevalence study on prone positioning of ARDS patients: the APRONET (ARDS Prone Position Network) study.
Intensive Care Medicine 2018, 44, 22-37.

Messika J, Kalfon P, Ricard JD
Adjuvant therapies in critical care: music therapy.
Intensive Care Medicine 2018, 44, 1929-1931.

La Combe B, Bleibtreu A, Messika J, Fernandes R, Clermont O, Branger C, Billard-Pomares T, Barnaud G, Magdoud F, Eveillard M, Kouatchet A, Lasocki S, Asfar P, Corvec S, Lakhal K, Armand-Lefevre L, Wolff M, Timsit JF, Bourdon S, Reignier J, Martin S, Fihman V, de Prost N, Bador J, Charles PE, Goret J, Boyer A, Wallet F, Jaillette E, Nseir S, Landraud L, Ruimy R, Danin PE, Dellamonica J, Cremniter J, Frat JP, Jauréguy F, Clec'h C, Decré D, Maury E, Dreyfuss D, Denamur E, Ricard JD
Decreased susceptibility to chlorhexidine affects a quarter of Escherichia coli isolates responsible for pneumonia in ICU patients.
Intensive Care Medicine 2018, 44, 531-533.

Gaudry S, Verney C, Hajage D, Ricard JD, Dreyfuss D
Hypothesis: early renal replacement therapy increases mortality in critically ill patients with acute on chronic renal failure. A post hoc analysis of the AKIKI trial.
Intensive Care Medicine 2018, 44, 1360-1361.

Ricard JD, Lisboa T
Caution for chlorhexidine gluconate use for oral care: insufficient data.
Intensive Care Medicine 2018, 44, 1162-1164.

Ruppé É, Lisboa T, Barbier F
The gut microbiota of critically ill patients: first steps in an unexplored world.
Intensive Care Medicine 2018, 44, 1561-1564.

Timsit JF, Ruppe E, Ferrer R
Focus on sepsis: new concepts and findings in sepsis care.
Intensive Care Medicine 2018, 44, 1997-1999.

Mallet C, Caseris M, Doit C, Simon AL, Michelet D, Madre C, Mazda K, Bonacorsi S, Ilharreborde B
Does Staphylococcus aureus nasal decontamination affect the rate of early surgical site infection in adolescent idiopathic scoliosis surgery?.
European Spine Journal: Official Publication of the European Spine Society, the European Spinal Deformity Society, and the European Section of the Cervical Spine Research Society 2018, 27, 2543-2549.

Plainvert C, El Alaoui F, Tazi A, Joubrel C, Anselem O, Ballon M, Frigo A, Branger C, Mandelbrot L, Goffinet F, Poyart C
Intrapartum group B Streptococcus screening in the labor ward by Xpert® GBS real-time PCR.
European Journal of Clinical Microbiology & Infectious Diseases: Official Publication of the European Society of Clinical Microbiology 2018, 37, 265-270.

de Lastours V, Goulenok T, Guérin F, Jacquier H, Eyma C, Chau F, Cattoir V, Fantin B
Ceftriaxone promotes the emergence of AmpC-overproducing Enterobacteriaceae in gut microbiota from hospitalized patients.
European Journal of Clinical Microbiology & Infectious Diseases: Official Publication of the European Society of Clinical Microbiology 2018, 37, 417-421.

Cherkaoui A, Gaïa N, Baud D, Leo S, Fischer A, Ruppe E, François P, Schrenzel J
Molecular characterization of fluoroquinolones, macrolides, and imipenem resistance in Haemophilus influenzae: analysis of the mutations in QRDRs and assessment of the extent of the AcrAB-TolC-mediated resistance.
European Journal of Clinical Microbiology & Infectious Diseases: Official Publication of the European Society of Clinical Microbiology 2018, 37, 2201-2210.

Morel F, Jacquier H, Desroches M, Fihman V, Kumanski S, Cambau E, Decousser JW, Berçot B
Use of Andromas and Bruker MALDI-TOF MS in the identification of Neisseria.
European Journal of Clinical Microbiology & Infectious Diseases: Official Publication of the European Society of Clinical Microbiology 2018, 37, 2273-2277.

Saba G, Andrade LF, Gaillat J, Bonnin P, Chidiac C, Illes HG, Laurichesse H, Messika J, Ricard JD, Detournay B, Petitpretz P, de Pouvourville G
Costs associated with community acquired pneumonia in France.
The European journal of health economics: HEPAC: health economics in prevention and care 2018, 19, 533-544.

Suzan-Monti M, Celse M, Vilotitch A, Demoulin B, Dray-Spira R, Yéni P, Lert F, Spire B, AVsg
Assessement of Awareness of, Concerns and Attitudes Towards HIV-Related Court-Case Sentences in France in a Representative Sample of People Living with HIV (ANRS VESPA2 Survey).
AIDS and behavior 2018, 22, 3264-3272.

Desnos-Ollivier M, Bórmida V, Poirier P, Nourrisson C, Pan D, Bretagne S, Puime A, Dromer F, FMSG, UIFIN
Population Structure of Candida parapsilosis: No Genetic Difference Between French and Uruguayan Isolates Using Microsatellite Length Polymorphism.
Mycopathologia 2018, 183, 381-390.

Alexandre K, Fantin B
Pharmacokinetics and Pharmacodynamics of Temocillin.
Clinical Pharmacokinetics 2018, 57, 287-296.

Froissart A, Rossi B, Ranque B, Jarrin I, Bergmann JF, Beaune S, Dautheville S, Breau N, Dauvergne A, Deluche L, Robert T, Gault N, Roy C, Zarrouk V, Steichen O, Fantin B, Sg
Effect of a Red Blood Cell Transfusion on Biological Markers Used to Determine the Cause of Anemia: A Prospective Study.
The American Journal of Medicine 2018, 131, 319-322.

Kaddour K, Lemasson J, Haettich-Pialoux B, Guedj N, Belmatoug N, Treton X, Becheur H, Fantin B, Descamps V, Le Bozec P
[The value of fecal calprotectin assay in chronic panniculitis of unknown etiology].
Annales De Dermatologie Et De Venereologie 2018, 145, 702-705.

Leblanc J, Hejblum G, Costagliola D, Durand-Zaleski I, Lert F, de Truchis P, Verbeke G, Rousseau A, Piquet H, Simon F, Pateron D, Simon T, Crémieux AC, DV(ICdVG
Targeted HIV Screening in Eight Emergency Departments: The DICI-VIH Cluster-Randomized Two-Period Crossover Trial.
Annals of Emergency Medicine 2018, 72, 41-53.e9.

Ploton MC, Caseris M, Jost C, Picard Y, Gaschignard J, Pierron C, Canivez S, Le Dalour R, Bendavid M, Carol A, Bidet P, Bonacorsi S
Likely False-Positive Pneumococcal Antigen Test BinaxNOW Due to Parvimonas micra: A Four-Case Series.
Chest 2018, 153, e71-e73.

Loubet P, Burdet C, Vindrios W, Grall N, Wolff M, Yazdanpanah Y, Andremont A, Duval X, Lescure FX
Cefazolin versus anti-staphylococcal penicillins for treatment of methicillin-susceptible Staphylococcus aureus bacteraemia: a narrative review.
Clinical Microbiology and Infection: The Official Publication of the European Society of Clinical Microbiology and Infectious Diseases 2018, 24, 125-132.

Lecorche E, Haenn S, Mougari F, Kumanski S, Veziris N, Benmansour H, Raskine L, Moulin L, Cambau E, CM
Comparison of methods available for identification of Mycobacterium chimaera.
Clinical Microbiology and Infection: The Official Publication of the European Society of Clinical Microbiology and Infectious Diseases 2018, 24, 409-413.

Ruppé E, Burdet C, Grall N, de Lastours V, Lescure FX, Andremont A, Armand-Lefèvre L
Impact of antibiotics on the intestinal microbiota needs to be re-defined to optimize antibiotic usage.
Clinical Microbiology and Infection: The Official Publication of the European Society of Clinical Microbiology and Infectious Diseases 2018, 24, 3-5.

Tran Quang V, Bidet P, Birgy A, Caseris M, Basmaci R, Bonacorsi S
Susceptibility testing of Kingella kingae to cefazolin.
Clinical Microbiology and Infection: The Official Publication of the European Society of Clinical Microbiology and Infectious Diseases 2018, 24, 312-313.

Cambau E, Saunderson P, Matsuoka M, Cole ST, Kai M, Suffys P, Rosa PS, Williams D, Gupta UD, Lavania M, Cardona-Castro N, Miyamoto Y, Hagge D, Srikantam A, Hongseng W, Indropo A, Vissa V, Johnson RC, Cauchoix B, Pannikar VK, Cooreman EaWD, Pemmaraju VRR, Gillini L, Wsnoaril
Antimicrobial resistance in leprosy: results of the first prospective open survey conducted by a WHO surveillance network for the period 2009-15.
Clinical Microbiology and Infection: The Official Publication of the European Society of Clinical Microbiology and Infectious Diseases 2018, 24, 1305-1310.

Peiffer-Smadja N, Abbara S, Rizk N, Pogliaghi M, Rondinaud E, Tesmoingt C, Massias L, Lucet JC, Alkhoder S, Armand-Lefèvre L, Lescure FX
High-dose daptomycin in patients with infective endocarditis or sternal wound infections.
Clinical Microbiology and Infection: The Official Publication of the European Society of Clinical Microbiology and Infectious Diseases 2018, 24, 1106-1108.

Ruppé E, Martin-Loeches I, Rouzé A, Levast B, Ferry T, Timsit JF
What's new in restoring the gut microbiota in ICU patients? Potential role of faecal microbiota transplantation.
Clinical Microbiology and Infection: The Official Publication of the European Society of Clinical Microbiology and Infectious Diseases 2018, 24, 803-805.

Chauffour A, Lecorche E, Reibel F, Mougari F, Raskine L, Aubry A, Jarlier V, Cambau E, CM
Prospective study on antimicrobial resistance in leprosy cases diagnosed in France from 2001 to 2015.
Clinical Microbiology and Infection: The Official Publication of the European Society of Clinical Microbiology and Infectious Diseases 2018, 24, 1213.e5-1213.e8.

Poirel L, Larpin Y, Dobias J, Stephan R, Decousser JW, Madec JY, Nordmann P
Rapid Polymyxin NP test for the detection of polymyxin resistance mediated by the mcr-1/mcr-2 genes.
Diagnostic Microbiology and Infectious Disease 2018, 90, 7-10.

Larsson DGJ, Andremont A, Bengtsson-Palme J, Brandt KK, de Roda Husman AM, Fagerstedt P, Fick J, Flach CF, Gaze WH, Kuroda M, Kvint K, Laxminarayan R, Manaia CM, Nielsen KM, Plant L, Ploy MC, Segovia C, Simonet P, Smalla K, Snape J, Topp E, van Hengel AJ, Verner-Jeffreys DW, Virta MPJ, Wellington EM, Wernersson AS
Critical knowledge gaps and research needs related to the environmental dimensions of antibiotic resistance.
Environment International 2018, 117, 132-138.

Macaux L, Ndoye O, Cordel H, Pomares TB, Seytre D, Bouchaud O, Cohen Y, Zahar JR, Carbonnelle E
Extensively-drug-resistant bacteria carriers among overseas travellers: one-third had not been hospitalized previously.
International Journal of Antimicrobial Agents 2018, 52, 385-389.

Woerther PL, Lepeule R, Burdet C, Decousser JW, Ruppé É, Barbier F
Carbapenems and alternative β-lactams for the treatment of infections due to extended-spectrum β-lactamase-producing Enterobacteriaceae: What impact on intestinal colonisation resistance?.
International Journal of Antimicrobial Agents 2018, 52, 762-770.

Phillips-Houlbracq M, Ricard JD, Foucrier A, Yoder-Himes D, Gaudry S, Bex J, Messika J, Margetis D, Chatel J, Dobrindt U, Denamur E, Roux D
Pathophysiology of Escherichia coli pneumonia: Respective contribution of pathogenicity islands to virulence.
International journal of medical microbiology: IJMM 2018, 308, 290-296.

Berger M, Berger P, Denamur E, Mellmann A, Dobrindt U
Core elements of the vegetative replication control of the Inc1 plasmid pO104_90 of Escherichia coli O104:H4 also regulate its transfer frequency.
International journal of medical microbiology: IJMM 2018, 308, 962-968.

Bougouin W, Dumas F, Karam N, Maupain C, Marijon E, Lamhaut L, Jost D, Geri G, Beganton F, Varenne O, Spaulding C, Jouven X, Cariou A, SDEC
Should We Perform an Immediate Coronary Angiogram in All Patients After Cardiac Arrest?: Insights From a Large French Registry.
JACC. Cardiovascular interventions 2018, 11, 249-256.

Jannic A, Maillet J, Rossi B, Guedj N, Descamps V, Fantin B, Le Bozec P
Flagellate erythema in systemic sclerosis: A case report.
JAAD case reports 2018, 4, 239-241.

Jauréguy F, Mansour H, Bigot J, Walewski V, Billard-Pomares T, Rahajamanana L, Picard B, Carbonnelle E
Use of the Xpert CarbaR assay for direct detection of carbapenemase genes from blood cultures and urine samples.
The Journal of Hospital Infection 2018, 98, 245-246.

Cheminet G, Kapel N, Bleibtreu A, Sadou-Yaye H, Bellanger A, Duval X, Joly F, Fantin B, de Lastours V, FGfFMT(
Faecal microbiota transplantation with frozen capsules for relapsing Clostridium difficile infections: the first experience from 15 consecutive patients in France.
The Journal of Hospital Infection 2018, 100, 148-151.

Garinet S, Fihman V, Jacquier H, Corvec S, Le Monnier A, Guillard T, Cattoir V, Zahar JR, Woerther PL, Carbonnelle E, Wargnier A, Kernéis S, Morand PC, G
Elective distribution of resistance to beta-lactams among Enterobacter cloacae genetic clusters.
The Journal of Infection 2018, 77, 178-182.

Droz N, Enouf V, Bidet P, Mohamed D, Behillil S, Simon AL, Bachy M, Caseris M, Bonacorsi S, Basmaci R
Temporal Association Between Rhinovirus Activity and Kingella kingae Osteoarticular Infections.
The Journal of Pediatrics 2018, 192, 234-239.e2.

Bruyand M, Mariani-Kurkdjian P, Gouali M, de Valk H, King LA, Le Hello S, Bonacorsi S, Loirat C
Hemolytic uremic syndrome due to Shiga toxin-producing Escherichia coli infection.
Medecine Et Maladies Infectieuses 2018, 48, 167-174.

Lepelletier D, Bonnet R, Plésiat P, Nicolas-Chanoine MH, Berger-Carbonne A, Chidiac C, Grandbastien B, nwgftFHCoPH
Emergence of plasmid-mediated colistin resistance (mcr-1) among Enterobacteriaceae strains: Laboratory detection of resistance and measures to control its dissemination.
Medecine Et Maladies Infectieuses 2018, 48, 250-255.

Armand-Lefèvre L, Andremont A, Ruppé E
Travel and acquisition of multidrug-resistant Enterobacteriaceae.
Medecine Et Maladies Infectieuses 2018, 48, 431-441.

Caron F, Galperine T, Flateau C, Azria R, Bonacorsi S, Bruyère F, Cariou G, Clouqueur E, Cohen R, Doco-Lecompte T, Elefant E, Faure K, Gauzit R, Gavazzi G, Lemaitre L, Raymond J, Senneville E, Sotto A, Subtil D, Trivalle C, Merens A, Etienne M
Practice guidelines for the management of adult community-acquired urinary tract infections.
Medecine Et Maladies Infectieuses 2018, 48, 327-358.

Gautier G, Guillard T, Podac B, Bercot B, Vernet-Garnier V, de Champs C
Detection of different classes of carbapenemases: Adaptation and assessment of a phenotypic method applied to Enterobacteriaceae, Pseudomonas aeruginosa and Acinetobacter baumannii, and proposal of a new algorithm.
Journal of Microbiological Methods 2018, 147, 26-35.

Ruppé E, Cherkaoui A, Wagner N, La Scala GC, Beaulieu JY, Girard M, Frey J, Lazarevic V, Schrenzel J
In vivo selection of a multidrug-resistant Aeromonas salmonicida during medicinal leech therapy.
New Microbes and New Infections 2018, 21, 23-27.

de Lastours V
[Should doses of antibiotics be adjusted?].
La Revue De Medecine Interne 2018, 39, 171-177.

Goulenok T, Chopin D, De Lastours V, Zarrouk V, Lepeule R, Fantin B, Lefort A
[Influenzae and pneumococcal vaccination rate in an internal medicine ward].
La Revue De Medecine Interne 2018, 39, 386-392.

Voiriot G, Chalumeau M, Messika J, Basille D, Philippe B, Ricard JD, Andrejak C, Jounieaux V, Sanchez O, Fartoukh M
[Risks associated with the use of non-steroidal anti-inflammatory drugs during pneumonia].
Revue Des Maladies Respiratoires 2018, 35, 430-440.

Ruppé E, Andremont A, Armand-Lefèvre L
Digestive tract colonization by multidrug-resistant Enterobacteriaceae in travellers: An update.
Travel Medicine and Infectious Disease 2018, 21, 28-35.

Reignier J, Boisramé-Helms J, Brisard L, Lascarrou JB, Ait Hssain A, Anguel N, Argaud L, Asehnoune K, Asfar P, Bellec F, Botoc V, Bretagnol A, Bui HN, Canet E, Da Silva D, Darmon M, Das V, Devaquet J, Djibre M, Ganster F, Garrouste-Orgeas M, Gaudry S, Gontier O, Guérin C, Guidet B, Guitton C, Herbrecht JE, Lacherade JC, Letocart P, Martino F, Maxime V, Mercier E, Mira JP, Nseir S, Piton G, Quenot JP, Richecoeur J, Rigaud JP, Robert R, Rolin N, Schwebel C, Sirodot M, Tinturier F, Thévenin D, Giraudeau B, Le Gouge A, N2TI, CRiICaS(g
Enteral versus parenteral early nutrition in ventilated adults with shock: a randomised, controlled, multicentre, open-label, parallel-group study (NUTRIREA-2).
Lancet (London, England) 2018, 391, 133-143.

Molina JM, Charreau I, Chidiac C, Pialoux G, Cua E, Delaugerre C, Capitant C, Rojas-Castro D, Fonsart J, Bercot B, Bébéar C, Cotte L, Robineau O, Raffi F, Charbonneau P, Aslan A, Chas J, Niedbalski L, Spire B, Sagaon-Teyssier L, Carette D, Mestre SL, Doré V, Meyer L, AISG
Post-exposure prophylaxis with doxycycline to prevent sexually transmitted infections in men who have sex with men: an open-label randomised substudy of the ANRS IPERGAY trial.
The Lancet. Infectious Diseases 2018, 18, 308-317.

Harris SR, Cole MJ, Spiteri G, Sánchez-Busó L, Golparian D, Jacobsson S, Goater R, Abudahab K, Yeats CA, Bercot B, Borrego MJ, Crowley B, Stefanelli P, Tripodo F, Abad R, Aanensen DM, Unemo M, EGsg
Public health surveillance of multidrug-resistant clones of Neisseria gonorrhoeae in Europe: a genomic survey.
The Lancet. Infectious Diseases 2018, 18, 758-768.

Lafolie J, Labbé A, L'Honneur AS, Madhi F, Pereira B, Decobert M, Adam MN, Gouraud F, Faibis F, Arditty F, Marque-Juillet S, Guitteny MA, Lagathu G, Verdan M, Rozenberg F, Mirand A, Peigue-Lafeuille H, Henquell C, Bailly JL, Archimbaud C, BEDI(ippst
Assessment of blood enterovirus PCR testing in paediatric populations with fever without source, sepsis-like disease, or suspected meningitis: a prospective, multicentre, observational cohort study.
The Lancet. Infectious Diseases 2018, 18, 1385-1396.

Niemeijer AN, Leung D, Huisman MC, Bahce I, Hoekstra OS, van Dongen GaMS, Boellaard R, Du S, Hayes W, Smith R, Windhorst AD, Hendrikse NH, Poot A, Vugts DJ, Thunnissen E, Morin P, Lipovsek D, Donnelly DJ, Bonacorsi SJ, Velasquez LM, de Gruijl TD, Smit EF, de Langen AJ
Whole body PD-1 and PD-L1 positron emission tomography in patients with non-small-cell lung cancer.
Nature Communications 2018, 9, 4664.

Munk P, Knudsen BE, Lukjancenko O, Duarte ASR, Van Gompel L, Luiken REC, Smit LAM, Schmitt H, Garcia AD, Hansen RB, Petersen TN, Bossers A, Ruppé E, EG, Lund O, Hald T, Pamp SJ, Vigre H, Heederik D, Wagenaar JA, Mevius D, Aarestrup FM
Abundance and diversity of the faecal resistome in slaughter pigs and broilers in nine European countries.
Nature Microbiology 2018, 3, 898-908.

Munk P, Knudsen BE, Lukjancenko O, Duarte ASR, Van Gompel L, Luiken REC, Smit LAM, Schmitt H, Garcia AD, Hansen RB, Petersen TN, Bossers A, Ruppé E, Lund O, Hald T, Pamp SJ, Vigre H, Heederik D, Wagenaar JA, Mevius D, Aarestrup FM, EG
Author Correction: Abundance and diversity of the faecal resistome in slaughter pigs and broilers in nine European countries.
Nature Microbiology 2018, 3, 1186.

Combes A, Hajage D, Capellier G, Demoule A, Lavoué S, Guervilly C, Da Silva D, Zafrani L, Tirot P, Veber B, Maury E, Levy B, Cohen Y, Richard C, Kalfon P, Bouadma L, Mehdaoui H, Beduneau G, Lebreton G, Brochard L, Ferguson ND, Fan E, Slutsky AS, Brodie D, Mercat A, ETGRaE
Extracorporeal Membrane Oxygenation for Severe Acute Respiratory Distress Syndrome.
The New England Journal of Medicine 2018, 378, 1965-1975.

Zarrouk V, Gras J, Dubée V, de Lastours V, Lopes A, Leflon V, Allaham W, Guigui P, Fantin B
Increased mortality in patients aged 75 years or over with pyogenic vertebral osteomyelitis.
Infectious Diseases (London, England) 2018, 50, 783-787.

Guery R, Habibi A, Arlet JB, Lionnet F, de Lastours V, Decousser JW, Mainardi JL, Razazi K, Baranes L, Bartolucci P, Godeau B, Galacteros F, Michel M, Mahevas M
Severe, non specific symptoms in non-typhoidal Salmonella infections in adult patients with sickle cell disease: a retrospective multicentre study.
Infectious Diseases (London, England) 2018, 50, 822-830.

Unal G, Alessandri-Gradt E, Leoz M, Pavie J, Lefèvre C, Panjo H, Charpentier C, Descamps D, Barin F, Simon F, Meyer L, Plantier JC, OS
Human Immunodeficiency Virus Type 1 Group O Infection in France: Clinical Features and Immunovirological Response to Antiretrovirals.
Clinical Infectious Diseases: An Official Publication of the Infectious Diseases Society of America 2018, 66, 1785-1793.

Andremont A
Too Early to Recommend Early Fecal Microbiota Transplantation in Patients With Severe Clostridium difficile Infection, or Not Too Early?.
Clinical Infectious Diseases: An Official Publication of the Infectious Diseases Society of America 2018, 66, 651-652.

Argy N, Le Gal S, Coppée R, Song Z, Vindrios W, Massias L, Kao WC, Hunte C, Yazdanpanah Y, Lucet JC, Houzé S, Clain J, Nevez G
Pneumocystis Cytochrome b Mutants Associated With Atovaquone Prophylaxis Failure as the Cause of Pneumocystis Infection Outbreak Among Heart Transplant Recipients.
Clinical Infectious Diseases: An Official Publication of the Infectious Diseases Society of America 2018, 67, 913-919.

Pérez-Brocal V, Andremont A, Moya A
Isolation in small populations of Wayampi Amerindians promotes endemicity and homogenisation of their faecal virome, but its distribution is not entirely random.
FEMS microbiology ecology 2018, 94,

de Gunzburg J, Ghozlane A, Ducher A, Le Chatelier E, Duval X, Ruppé E, Armand-Lefevre L, Sablier-Gallis F, Burdet C, Alavoine L, Chachaty E, Augustin V, Varastet M, Levenez F, Kennedy S, Pons N, Mentré F, Andremont A
Protection of the Human Gut Microbiome From Antibiotics.
The Journal of Infectious Diseases 2018, 217, 628-636.

Heinrichs MT, Vashakidze S, Nikolaishvili K, Sabulua I, Tukvadze N, Bablishvili N, Gogishvili S, Little BP, Bernheim A, Guarner J, Peloquin CA, Blumberg HM, Derendorf H, Kempker RR
Moxifloxacin target site concentrations in patients with pulmonary TB utilizing microdialysis: a clinical pharmacokinetic study.
The Journal of Antimicrobial Chemotherapy 2018, 73, 477-483.

Le Meur L, Tantet C, Lê MP, Desselas E, Bonnal C, Lillo-Le-Louet A, Sonneville R, Massias L, Giraud J, Descamps D, Yazdanpanah Y, Lariven S, Peytavin G
Serious neuropsychiatric adverse effects related to interaction between itraconazole and darunavir/ritonavir in an HIV-infected patient with cerebral histoplasmosis.
The Journal of Antimicrobial Chemotherapy 2018, 73, 1108-1110.

Pressiat C, Hirt D, Treluyer JM, Zheng Y, Morlat P, Naqvi A, Tran L, Viard JP, Avettand-Fenoel V, Rouzioux C, Meyer L, Cheret A, OSG
Decreased darunavir concentrations during once-daily co-administration with maraviroc and raltegravir: OPTIPRIM-ANRS 147 trial.
The Journal of Antimicrobial Chemotherapy 2018, 73, 1020-1024.

Reissier S, Saleh-Mghir A, Guerin F, Massias L, Ghout I, Sinel C, Cattoir V, Cremieux AC
In vivo daptomycin efficacy against experimental vancomycin-resistant Enterococcus faecium endocarditis.
The Journal of Antimicrobial Chemotherapy 2018, 73, 981-986.

Berleur M, Guérin F, Massias L, Chau F, Poujade J, Cattoir V, Fantin B, de Lastours V
Activity of fosfomycin alone or combined with temocillin in vitro and in a murine model of peritonitis due to KPC-3- or OXA-48-producing Escherichia coli.
The Journal of Antimicrobial Chemotherapy 2018, 73, 3074-3080.

Pommelet V, Mariani P, Basmaci R, Tourdjman M, Morin L, Gaschignard J, de Lauzanne A, Lemaitre C, Bonacorsi S, Faye A
Enteric fever among children: 50 cases in a French tertiary care centre.
Journal of Travel Medicine 2018, 25,

La Combe B, Mahérault AC, Messika J, Billard-Pomares T, Branger C, Landraud L, Dreyfuss D, Dib F, Massias L, Ricard JD
Oropharyngeal Bacterial Colonization after Chlorhexidine Mouthwash in Mechanically Ventilated Critically Ill Patients.
Anesthesiology 2018, 129, 1140-1148.

Messika J, Schmidt M, Aubry A, Combes A, Ricard JD
Extracorporeal Membrane Oxygenation-Associated Infections: Carefully Consider Cannula Infections!.
Critical Care Medicine 2018, 46, e171-e172.

Frat JP, Ragot S, Coudroy R, Constantin JM, Girault C, Prat G, Boulain T, Demoule A, Ricard JD, Razazi K, Lascarrou JB, Devaquet J, Mira JP, Argaud L, Chakarian JC, Fartoukh M, Nseir S, Mercat A, Brochard L, Robert R, Thille AW, Rn
Predictors of Intubation in Patients With Acute Hypoxemic Respiratory Failure Treated With a Noninvasive Oxygenation Strategy.
Critical Care Medicine 2018, 46, 208-215.

Rybak A, Levy C, Bonacorsi S, Béchet S, Vié le Sage F, Elbez A, Varon E, Cohen R
Antibiotic Resistance of Potential Otopathogens Isolated From Nasopharyngeal Flora of Children With Acute Otitis Media Before, During and After Pneumococcal Conjugate Vaccines Implementation.
The Pediatric Infectious Disease Journal 2018, 37, e72-e78.

Gaschignard J, Hassani N, El Sissy C, Bonacorsi S, Dauger S, Chomton M, Taha MK, Levy M
Delayed Generalized Necrotic Purpuric Rash in a C6-deficient 12-year-old Girl Treated for Group W Meningococcal Disease.
The Pediatric Infectious Disease Journal 2018, 37, 1014-1015.

Prat D, Messika J, Millereux M, Gouezel C, Hamzaoui O, Demars N, Jacobs F, Trouiller P, Ricard JD, Sztrymf B
Constipation in critical care patients: both timing and duration matter.
European Journal of Gastroenterology & Hepatology 2018, 30, 1003-1008.

Rafat C, Messika J, Barnaud G, Dufour N, Magdoud F, Billard-Pomarès T, Gaudry S, Dreyfuss D, Branger C, Decré D, Ricard JD
Hypervirulent Klebsiella pneumoniae, a 5-year study in a French ICU.
Journal of Medical Microbiology 2018, 67, 1083-1089.

Branger C, Ledda A, Billard-Pomares T, Doublet B, Fouteau S, Barbe V, Roche D, Cruveiller S, Médigue C, Castellanos M, Decré D, Drieux-Rouze L, Clermont O, Glodt J, Tenaillon O, Cloeckaert A, Arlet G, Denamur E
Extended-spectrum β-lactamase-encoding genes are spreading on a wide range of Escherichia coli plasmids existing prior to the use of third-generation cephalosporins.
Microbial Genomics 2018

Royer G, Decousser JW, Branger C, Dubois M, Médigue C, Denamur E, Vallenet D
PlaScope: a targeted approach to assess the plasmidome from genome assemblies at the species level.
Microbial Genomics 2018

Landau LA, Cornfeld E, Sela E
Charge Fractionalization in the Two-Channel Kondo Effect.
Physical Review Letters 2018, 120, 186801.

Sellier PO, Maylin S, Brichler S, Berçot B, Lopes A, Chopin D, Pogliaghi M, Munier AL, Delcey V, Simoneau G, Evans J, Gordien E, Simon F, Bergmann JF
Hepatitis B Virus-Hepatitis D Virus mother-to-child co-transmission: A retrospective study in a developed country.
Liver International: Official Journal of the International Association for the Study of the Liver 2018, 38, 611-618.

Desroches M, Clermont O, Lafeuillade B, Rodriguez C, Darty M, Royer G, Bouvet O, Ounnoughene N, Noizat-Pirenne F, Denamur E, Decousser JW
Genotypic and phenotypic characteristics of Escherichia coli involved in transfusion-transmitted bacterial infections: implications for preventive strategies.
Transfusion 2018, 58, 1940-1950.

Birgy A, Madhi F, Hogan J, Doit C, Gaschignard J, Caseris M, Bidet P, Cohen R, Bonacorsi S
CTX-M-55-, MCR-1-, and FosA-Producing Multidrug-Resistant Escherichia coli Infection in a Child in France.
Antimicrobial Agents and Chemotherapy 2018, 62,

Burdet C, Sayah-Jeanne S, Nguyen TT, Hugon P, Sablier-Gallis F, Saint-Lu N, Corbel T, Ferreira S, Pulse M, Weiss W, Andremont A, Mentré F, de Gunzburg J
Antibiotic-Induced Dysbiosis Predicts Mortality in an Animal Model of Clostridium difficile Infection.
Antimicrobial Agents and Chemotherapy 2018, 62,

Cointe A, Bonacorsi S, Truong J, Hobson C, Doit C, Monjault A, Bidet P, Birgy A
Detection of Carbapenemase-Producing Enterobacteriaceae in Positive Blood Culture Using an Immunochromatographic RESIST-4 O.K.N.V. Assay.
Antimicrobial Agents and Chemotherapy 2018, 62,

Ghalayini M, Launay A, Bridier-Nahmias A, Clermont O, Denamur E, Lescat M, Tenaillon O
Evolution of a Dominant Natural Isolate of Escherichia coli in the Human Gut over the Course of a Year Suggests a Neutral Evolution with Reduced Effective Population Size.
Applied and Environmental Microbiology 2018, 84,

Caméléna F, Cointe A, Mathy V, Hobson C, Doit C, Bercot B, Decré D, Podglajen I, Dortet L, Monjault A, Bidet P, Bonacorsi S, Birgy A
Within-a-Day Detection and Rapid Characterization of Carbapenemase by Use of a New Carbapenem Inactivation Method-Based Test, CIMplus.
Journal of Clinical Microbiology 2018, 56,

Basmaci R, Bidet P, Mallet C, Vialle R, Bonacorsi S
Distribution of Kingella kingae Capsular Serotypes in France Assessed by a Multiplex PCR Assay on Osteoarticular Samples.
Journal of Clinical Microbiology 2018, 56,

Desroches M, Royer G, Roche D, Mercier-Darty M, Vallenet D, Médigue C, Bastard K, Rodriguez C, Clermont O, Denamur E, Decousser JW
The Odyssey of the Ancestral Escherich Strain through Culture Collections: an Example of Allopatric Diversification.
mSphere 2018

Ricard JD, Dib F, Esposito-Farese M, Messika J, Girault C, Rn
Comparison of high flow nasal cannula oxygen and conventional oxygen therapy on ventilatory support duration during acute-on-chronic respiratory failure: study protocol of a multicentre, randomised, controlled trial. The 'HIGH-FLOW ACRF' study.
BMJ open 2018, 8, e022983.

Burdet C, Loubet P, Le Moing V, Vindrios W, Esposito-Farèse M, Linard M, Ferry T, Massias L, Tattevin P, Wolff M, Vandenesch F, Grall N, Quintin C, Mentré F, Duval X, Lescure FX, Csg
Efficacy of cloxacillin versus cefazolin for methicillin-susceptible Staphylococcus aureus bacteraemia (CloCeBa): study protocol for a randomised, controlled, non-inferiority trial.
BMJ open 2018, 8, e023151.

Thille AW, Muller G, Gacouin A, Coudroy R, Demoule A, Sonneville R, Beloncle F, Girault C, Dangers L, Lautrette A, Cabasson S, Rouzé A, Vivier E, Le Meur A, Ricard JD, Razazi K, Barberet G, Lebert C, Ehrmann S, Picard W, Bourenne J, Pradel G, Bailly P, Terzi N, Buscot M, Lacave G, Danin PE, Nanadoumgar H, Gibelin A, Zanre L, Deye N, Ragot S, Frat JP, Rrn
High-flow nasal cannula oxygen therapy alone or with non-invasive ventilation during the weaning period after extubation in ICU: the prospective randomised controlled HIGH-WEAN protocol.
BMJ open 2018, 8, e023772.

Messika J, Gaudry S, Tubach F, Guillo S, Dreyfuss D, Hajage D, Ricard JD
Underreporting of End-of-Life Decisions in Critical Care Trials: A Call to Modify the Consolidated Standards of Reporting Trials Statement.
American Journal of Respiratory and Critical Care Medicine 2018, 197, 263-266.

Gaudry S, Hajage D, Schortgen F, Martin-Lefevre L, Verney C, Pons B, Boulet E, Boyer A, Chevrel G, Lerolle N, Carpentier D, de Prost N, Lautrette A, Bretagnol A, Mayaux J, Nseir S, Megarbane B, Thirion M, Forel JM, Maizel J, Yonis H, Markowicz P, Thiery G, Tubach F, Ricard JD, Dreyfuss D
Timing of Renal Support and Outcome of Septic Shock and Acute Respiratory Distress Syndrome. A Post Hoc Analysis of the AKIKI Randomized Clinical Trial.
American Journal of Respiratory and Critical Care Medicine 2018, 198, 58-66.

van Ingen J, Aksamit T, Andrejak C, Böttger EC, Cambau E, Daley CL, Griffith DE, Guglielmetti L, Holland SM, Huitt GA, Koh WJ, Lange C, Leitman P, Marras TK, Morimoto K, Olivier KN, Santin M, Stout JE, Thomson R, Tortoli E, Wallace RJ, Winthrop KL, Wagner D, fNN
Treatment outcome definitions in nontuberculous mycobacterial pulmonary disease: an NTM-NET consensus statement.
The European Respiratory Journal 2018, 51,

Kempker RR, Heinrichs MT, Nikolaishvili K, Sabulua I, Bablishvili N, Gogishvili S, Avaliani Z, Little BP, Bernheim A, Derendorf H, Blumberg HM, Vashakidze S, Peloquin CA
A comparison of linezolid lung tissue concentrations among patients with drug-resistant tuberculosis.
The European Respiratory Journal 2018, 51,

Mieras LF, Taal AT, van Brakel WH, Cambau E, Saunderson PR, Smith WCS, Prakoeswa CRS, Astari L, Scollard DM, do Nascimento DC, Grosset J, Kar HK, Izumi S, Gillini L, Virmond MCL, Sturkenboom MGG
An enhanced regimen as post-exposure chemoprophylaxis for leprosy: PEP+.
BMC infectious diseases 2018, 18, 506.

Day MJ, Spiteri G, Jacobsson S, Woodford N, Amato-Gauci AJ, Cole MJ, Unemo M, EGn
Stably high azithromycin resistance and decreasing ceftriaxone susceptibility in Neisseria gonorrhoeae in 25 European countries, 2016.
BMC infectious diseases 2018, 18, 609.

Andrade LF, Saba G, Ricard JD, Messika J, Gaillat J, Bonnin P, Chidiac C, Illes HG, Laurichesse H, Detournay B, Petitpretz P, de Pouvourville G
Health related quality of life in patients with community-acquired pneumococcal pneumonia in France.
Health and Quality of Life Outcomes 2018, 16, 28.

Abe T, Madotto F, Pham T, Nagata I, Uchida M, Tamiya N, Kurahashi K, Bellani G, Laffey JG, LSIatETG
Epidemiology and patterns of tracheostomy practice in patients with acute respiratory distress syndrome in ICUs across 50 countries.
Critical Care (London, England) 2018, 22, 195.

Mebazaa A, Geven C, Hollinger A, Wittebole X, Chousterman BG, Blet A, Gayat E, Hartmann O, Scigalla P, Struck J, Bergmann A, Antonelli M, Beishuizen A, Constantin JM, Damoisel C, Deye N, Di Somma S, Dugernier T, François B, Gaudry S, Huberlant V, Lascarrou JB, Marx G, Mercier E, Oueslati H, Pickkers P, Sonneville R, Legrand M, Laterre PF, A1si
Circulating adrenomedullin estimates survival and reversibility of organ failure in sepsis: the prospective observational multinational Adrenomedullin and Outcome in Sepsis and Septic Shock-1 (AdrenOSS-1) study.
Critical Care (London, England) 2018, 22, 354.

Rambaud J, Lidouren F, Sage M, Kohlhauer M, Nadeau M, Fortin-Pellerin É, Micheau P, Zilberstein L, Mongardon N, Ricard JD, Terada M, Bruneval P, Berdeaux A, Ghaleh B, Walti H, Tissier R
Hypothermic total liquid ventilation after experimental aspiration-associated acute respiratory distress syndrome.
Annals of Intensive Care 2018, 8, 57.

Jean-Baptiste S, Messika J, Hajage D, Gaudry S, Barbieri J, Duboc H, Dreyfuss D, Coffin B, Ricard JD
Clinical impact of upper gastrointestinal endoscopy in critically ill patients with suspected bleeding.
Annals of Intensive Care 2018, 8, 75.

STG
Impact of oversedation prevention in ventilated critically ill patients: a randomized trial-the AWARE study.
Annals of Intensive Care 2018, 8, 93.

Lanza VF, Baquero F, Martínez JL, Ramos-Ruíz R, González-Zorn B, Andremont A, Sánchez-Valenzuela A, Ehrlich SD, Kennedy S, Ruppé E, van Schaik W, Willems RJ, de la Cruz F, Coque TM
In-depth resistome analysis by targeted metagenomics.
Microbiome 2018, 6, 11.

Angers-Loustau A, Petrillo M, Bengtsson-Palme J, Berendonk T, Blais B, Chan KG, Coque TM, Hammer P, Heß S, Kagkli DM, Krumbiegel C, Lanza VF, Madec JY, Naas T, O'Grady J, Paracchini V, Rossen JWA, Ruppé E, Vamathevan J, Venturi V, Van den Eede G
The challenges of designing a benchmark strategy for bioinformatics pipelines in the identification of antimicrobial resistance determinants using next generation sequencing technologies.
F1000Research 2018

Coldiron ME, Assao B, Page AL, Hitchings MDT, Alcoba G, Ciglenecki I, Langendorf C, Mambula C, Adehossi E, Sidikou F, Tassiou EI, De Lastours V, Grais RF
Single-dose oral ciprofloxacin prophylaxis as a response to a meningococcal meningitis epidemic in the African meningitis belt: A 3-arm, open-label, cluster-randomized trial.
PLoS medicine 2018, 15, e1002593.

Roux D, Schaefers M, Clark BS, Weatherholt M, Renaud D, Scott D, LiPuma JJ, Priebe G, Gerard C, Yoder-Himes DR
A putative lateral flagella of the cystic fibrosis pathogen Burkholderia dolosa regulates swimming motility and host cytokine production.
PloS One 2018, 13, e0189810.

Madhi F, Jung C, Timsit S, Levy C, Biscardi S, Lorrot M, Grimprel E, Hees L, Craiu I, Galerne A, Dubos F, Cixous E, Hentgen V, Béchet S, UtIdtESBlEiCG, Bonacorsi S, Cohen R
Febrile urinary-tract infection due to extended-spectrum beta-lactamase-producing Enterobacteriaceae in children: A French prospective multicenter study.
PloS One 2018, 13, e0190910.

Sanneh B, Kebbeh A, Jallow HS, Camara Y, Mwamakamba LW, Ceesay IF, Barrow E, Sowe FO, Sambou SM, Baldeh I, Jallow A, Jorge Raul MA, Andremont A
Prevalence and risk factors for faecal carriage of Extended Spectrum β-lactamase producing Enterobacteriaceae among food handlers in lower basic schools in West Coast Region of The Gambia.
PloS One 2018, 13, e0200894.

Lorme F, Maataoui N, Rondinaud E, Esposito-Farèse M, Clermont O, Ruppe E, Arlet G, Genel N, VRsg, Matheron S, Andremont A, Armand-Lefevre L
Acquisition of plasmid-mediated cephalosporinase producing Enterobacteriaceae after a travel to the tropics.
PloS One 2018, 13, e0206909.

Ingelbeen B, Bruyand M, Mariani-Kurkjian P, Le Hello S, Danis K, Sommen C, Bonacorsi S, de Valk H
Emerging Shiga-toxin-producing Escherichia coli serogroup O80 associated hemolytic and uremic syndrome in France, 2013-2016: Differences with other serogroups.
PloS One 2018, 13, e0207492.

Messika J, La Combe B, Ricard JD
Oropharyngeal colonization: epidemiology, treatment and ventilator-associated pneumonia prevention.
Annals of Translational Medicine 2018, 6, 426.

Poncin T, Fouere S, Braille A, Camelena F, Agsous M, Bebear C, Kumanski S, Lot F, Mercier-Delarue S, Ngangro NN, Salmona M, Schnepf N, Timsit J, Unemo M, Bercot B
Multidrug-resistant Neisseria gonorrhoeae failing treatment with ceftriaxone and doxycycline in France, November 2017.
Euro Surveillance: Bulletin Europeen Sur Les Maladies Transmissibles = European Communicable Disease Bulletin 2018, 23,

Golparian D, Rose L, Lynam A, Mohamed A, Bercot B, Ohnishi M, Crowley B, Unemo M
Multidrug-resistant Neisseria gonorrhoeae isolate, belonging to the internationally spreading Japanese FC428 clone, with ceftriaxone resistance and intermediate resistance to azithromycin, Ireland, August 2018.
Euro Surveillance: Bulletin Europeen Sur Les Maladies Transmissibles = European Communicable Disease Bulletin 2018, 23,

Fournier S, Desenfant L, Monteil C, Nion-Huang M, Richard C, Jarlier V, TAHOCG
Efficiency of different control measures for preventing carbapenemase-producing enterobacteria and glycopeptide-resistant Enterococcus faecium outbreaks: a 6-year prospective study in a French multihospital institution, January 2010 to December 2015.
Euro Surveillance: Bulletin Europeen Sur Les Maladies Transmissibles = European Communicable Disease Bulletin 2018, 23,

Gallezot JD, Nabulsi NB, Holden D, Lin SF, Labaree D, Ropchan J, Najafzadeh S, Donnelly DJ, Cao K, Bonacorsi S, Seiders J, Roppe J, Hayes W, Huang Y, Du S, Carson RE
Evaluation of the Lysophosphatidic Acid Receptor Type 1 Radioligand 11C-BMT-136088 for Lung Imaging in Rhesus Monkeys.
Journal of Nuclear Medicine: Official Publication, Society of Nuclear Medicine 2018, 59, 327-333.

Donnelly DJ, Smith RA, Morin P, Lipovšek D, Gokemeijer J, Cohen D, Lafont V, Tran T, Cole EL, Wright M, Kim J, Pena A, Kukral D, Dischino DD, Chow P, Gan J, Adelakun O, Wang XT, Cao K, Leung D, Bonacorsi SJ, Hayes W
Synthesis and Biologic Evaluation of a Novel 18F-Labeled Adnectin as a PET Radioligand for Imaging PD-L1 Expression.
Journal of Nuclear Medicine: Official Publication, Society of Nuclear Medicine 2018, 59, 529-535.

Rossi B, Gasperini ML, Leflon-Guibout V, Gioanni A, de Lastours V, Rossi G, Dokmak S, Ronot M, Roux O, Nicolas-Chanoine MH, Fantin B, Lefort A
Hypervirulent Klebsiella pneumoniae in Cryptogenic Liver Abscesses, Paris, France.
Emerging Infectious Diseases 2018, 24, 221-229.

Cointe A, Birgy A, Mariani-Kurkdjian P, Liguori S, Courroux C, Blanco J, Delannoy S, Fach P, Loukiadis E, Bidet P, Bonacorsi S
Emerging Multidrug-Resistant Hybrid Pathotype Shiga Toxin-Producing Escherichia coli O80 and Related Strains of Clonal Complex 165, Europe.
Emerging Infectious Diseases 2018, 24, 2262-2269.

Rasigade JP, Leclère A, Alla F, Tessier A, Bes M, Lechiche C, Vernet-Garnier V, Laouénan C, Vandenesch F, Leport C, ASG
Staphylococcus aureus CC30 Lineage and Absence of sed,j,r-Harboring Plasmid Predict Embolism in Infective Endocarditis.
Frontiers in Cellular and Infection Microbiology 2018, 8, 187.

Nicolas-Chanoine MH, Mayer N, Guyot K, Dumont E, Pagès JM
Interplay Between Membrane Permeability and Enzymatic Barrier Leads to Antibiotic-Dependent Resistance in Klebsiella Pneumoniae.
Frontiers in Microbiology 2018, 9, 1422.

Lazarevic V, Gaïa N, Girard M, Leo S, Cherkaoui A, Renzi G, Emonet S, Jamme S, Ruppé E, Vijgen S, Rubbia-Brandt L, Toso C, Schrenzel J
When Bacterial Culture Fails, Metagenomics Can Help: A Case of Chronic Hepatic Brucelloma Assessed by Next-Generation Sequencing.
Frontiers in Microbiology 2018, 9, 1566.

Machado D, Lecorche E, Mougari F, Cambau E, Viveiros M
Insights on Mycobacterium leprae Efflux Pumps and Their Implications in Drug Resistance and Virulence.
Frontiers in Microbiology 2018, 9, 3072.

Santockyte R, Kandoussi H, Chen W, Zheng N, Venkatarangan L, Gan J, Shen H, Bonacorsi SJ, Easter J, Burrell R, Zhang YJ, Zeng J
LC-MS/MS bioanalysis of plasma 1, 14-tetradecanedioic acid and 1, 16-hexadecanedioic acid as candidate biomarkers for organic anion-transporting polypeptide mediated drug-drug interactions.
Bioanalysis 2018, 10, 1473-1485.

 2017                                                                            

Lascarrou JB, Boisrame-Helms J, Bailly A, Le Thuaut A, Kamel T, Mercier E, Ricard JD, Lemiale V, Colin G, Mira JP, Meziani F, Messika J, Dequin PF, Boulain T, Azoulay E, Champigneulle B, Reignier J, CRiICaS(G
Video Laryngoscopy vs Direct Laryngoscopy on Successful First-Pass Orotracheal Intubation Among ICU Patients: A Randomized Clinical Trial.
JAMA 2017, 317, 483-493.

Hadjaj Y, Roux D, Justet A, Berquier G
Intra-alveolar hemorrhages due to left heart dysfunction and calcified constrictive pericarditis.
Intensive Care Medicine 2017, 43, 929.

Dreyfuss D, Gaudry S, Madotto F, Laffey JG
Some remaining important questions after LUNG SAFE : Discussion of "Potentially modifiable factors contributing to outcome from acute respiratory distress syndrome: the LUNG SAFE study".
Intensive Care Medicine 2017, 43, 598-599.

Cambau E, Durand-Zaleski I, Bretagne S, Brun-Buisson C, Cordonnier C, Duval X, Herwegh S, Pottecher J, Courcol R, Bastuji-Garin S, Est
Performance and economic evaluation of the molecular detection of pathogens for patients with severe infections: the EVAMICA open-label, cluster-randomised, interventional crossover trial.
Intensive Care Medicine 2017, 43, 1613-1625.

Gaudry S, Hajage D, Dreyfuss D, Joannidis M, Perner A
Optimal timing of renal replacement therapy in patients with acute kidney injury in the context of sepsis : Discussion on "Sepsis: frontiers in supportive care, organisation and research".
Intensive Care Medicine 2017, 43, 1546-1547.

Bassetti M, Poulakou G, Ruppe E, Bouza E, Van Hal SJ, Brink A
Antimicrobial resistance in the next 30 years, humankind, bugs and drugs: a visionary approach.
Intensive Care Medicine 2017, 43, 1464-1475.

Rasoanandrasana S, Decousser JW, Cattoir V, Berçot B, Domrane C, Fihman V, Grillon A, Lesenne A, Raskine L, Cambau E, Jacquier H
Use of ESwab in the Xpert® vanA/vanB PCR assay.
European Journal of Clinical Microbiology & Infectious Diseases: Official Publication of the European Society of Clinical Microbiology 2017, 36, 755-756.

Righi L, Amarsy R, Picat MQ, Thuillier M, Cambau E, Raskine L, Chevret S, Flicoteaux R
Monitoring antimicrobial resistance (AMR) using CUSUM control charts.
European Journal of Clinical Microbiology & Infectious Diseases: Official Publication of the European Society of Clinical Microbiology 2017, 36, 1519-1525.

Cole EL, Kim J, Donnelly DJ, Smith RA, Cohen D, Lafont V, Morin PE, Huang RYC, Chow PL, Hayes W, Bonacorsi S
Radiosynthesis and preclinical PET evaluation of 89Zr-nivolumab (BMS-936558) in healthy non-human primates.
Bioorganic & Medicinal Chemistry 2017, 25, 5407-5414.

Kollef MH, Ricard JD, Roux D, Francois B, Ischaki E, Rozgonyi Z, Boulain T, Ivanyi Z, János G, Garot D, Koura F, Zakynthinos E, Dimopoulos G, Torres A, Danker W, Montgomery AB
A Randomized Trial of the Amikacin Fosfomycin Inhalation System for the Adjunctive Therapy of Gram-Negative Ventilator-Associated Pneumonia: IASIS Trial.
Chest 2017, 151, 1239-1246.

Allerberger F, Cambau E, Lange C
Joint efforts urgently needed at times of emerging tuberculosis drug resistance.
Clinical Microbiology and Infection: The Official Publication of the European Society of Clinical Microbiology and Infectious Diseases 2017, 23, 129-130.

Andre E, Goeminne L, Cabibbe A, Beckert P, Kabamba Mukadi B, Mathys V, Gagneux S, Niemann S, Van Ingen J, Cambau E
Consensus numbering system for the rifampicin resistance-associated rpoB gene mutations in pathogenic mycobacteria.
Clinical Microbiology and Infection: The Official Publication of the European Society of Clinical Microbiology and Infectious Diseases 2017, 23, 167-172.

Pereyre S, Laurier Nadalié C, Bébéar C, ig
Mycoplasma genitalium and Trichomonas vaginalis in France: a point prevalence study in people screened for sexually transmitted diseases.
Clinical Microbiology and Infection: The Official Publication of the European Society of Clinical Microbiology and Infectious Diseases 2017, 23, 122.e1-122.e7.

Ruppé E, Olearo F, Pires D, Baud D, Renzi G, Cherkaoui A, Goldenberger D, Huttner A, François P, Harbarth S, Schrenzel J
Clonal or not clonal? Investigating hospital outbreaks of KPC-producing Klebsiella pneumoniae with whole-genome sequencing.
Clinical Microbiology and Infection: The Official Publication of the European Society of Clinical Microbiology and Infectious Diseases 2017, 23, 470-475.

Parize P, Muth E, Richaud C, Gratigny M, Pilmis B, Lamamy A, Mainardi JL, Cheval J, de Visser L, Jagorel F, Ben Yahia L, Bamba G, Dubois M, Join-Lambert O, Leruez-Ville M, Nassif X, Lefort A, Lanternier F, Suarez F, Lortholary O, Lecuit M, Eloit M
Untargeted next-generation sequencing-based first-line diagnosis of infection in immunocompromised adults: a multicentre, blinded, prospective study.
Clinical Microbiology and Infection: The Official Publication of the European Society of Clinical Microbiology and Infectious Diseases 2017, 23, 574.e1-574.e6.

Micaëlo M, Goubard A, La Ruche G, Denamur E, Tenaillon O, Cambau E, Jacquier H, Bercot B
Molecular epidemiology of penicillinase-producing Neisseria gonorrhoeae isolates in France.
Clinical Microbiology and Infection: The Official Publication of the European Society of Clinical Microbiology and Infectious Diseases 2017, 23, 968-973.

Hakima N, Bidet P, Lopez M, Rioualen S, Carol A, Bonacorsi S
First case of neonatal bacteremia due to Dyella genus.
Diagnostic Microbiology and Infectious Disease 2017, 87, 199-201.

Morel F, Decousser JW, Kumanski S, Cambau E, Denamur E, Berçot B
Association of the 16S rRNA methylase gene rmtB with a novel insertion sequence element belonging to the ISL3 family.
International Journal of Antimicrobial Agents 2017, 49, 117-118.

Pulcini C, Tebano G, Mutters NT, Tacconelli E, Cambau E, Kahlmeter G, Jarlier V, EEESRWG
Selective reporting of antibiotic susceptibility test results in European countries: an ESCMID cross-sectional survey.
International Journal of Antimicrobial Agents 2017, 49, 162-166.

Zahar JR, Lesprit P, Ruckly S, Eden A, Hikombo H, Bernard L, Harbarth S, Timsit JF, Brun-Buisson C, BSG
Erratum to 'Predominance of healthcare-associated cases among episodes of community-onset bacteraemia due to extended-spectrum β-lactamase-producing Enterobacteriaceae' [International Journal of Antimicrobial Agents 49/1 67-73].
International Journal of Antimicrobial Agents 2017, 49, 480-481.

Grall N, Lazarevic V, Gaïa N, Couffignal C, Laouénan C, Ilic-Habensus E, Wieder I, Plesiat P, Angebault C, Bougnoux ME, Armand-Lefevre L, Andremont A, Duval X, Schrenzel J
Unexpected persistence of extended-spectrum β-lactamase-producing Enterobacteriaceae in the faecal microbiota of hospitalised patients treated with imipenem.
International Journal of Antimicrobial Agents 2017, 50, 81-87.

Corlouer C, Lamy B, Desroches M, Ramos-Vivas J, Mehiri-Zghal E, Lemenand O, Delarbre JM, Decousser JW, CdBVHdHdF
Stenotrophomonas maltophilia healthcare-associated infections: identification of two main pathogenic genetic backgrounds.
The Journal of Hospital Infection 2017, 96, 183-188.

Geraud de Galassus A, Cizeau F, Agathine A, Domrane C, Ducellier D, Fihman V, Decousser JW
Contribution and limits of clinical specimens for the screening of intestinal multi-drug-resistant bacteria in view of laboratory automation.
The Journal of Hospital Infection 2017, 97, 59-63.

Wyplosz B, Mougari F, Al Rawi M, Baillon C, Marigot-Outtandy D, Le Dû D, Jachym M, Hervé V, Raskine L, Cambau E
Visualizing viable Mycobacterium tuberculosis in sputum to monitor isolation measures.
The Journal of Infection 2017, 74, 207-210.

Maitre T, Aubry A, Jarlier V, Robert J, Veziris N, CM
Multidrug and extensively drug-resistant tuberculosis.
Medecine Et Maladies Infectieuses 2017, 47, 3-10.

Stahl JP, Azouvi P, Bruneel F, De Broucker T, Duval X, Fantin B, Girard N, Herrmann JL, Honnorat J, Lecuit M, Mailles A, Martinez-Almoyna L, Morand P, Piroth L, Tattevin P, rg
Guidelines on the management of infectious encephalitis in adults.
Medecine Et Maladies Infectieuses 2017, 47, 179-194.

Goulenok T, Buzelé R, Duval X, Bruneel F, Stahl JP, Fantin B
Management of adult infectious encephalitis in metropolitan France.
Medecine Et Maladies Infectieuses 2017, 47, 206-220.

Brossier F, Sougakoff W, FNRCfM
Molecular detection methods of resistance to antituberculosis drugs in Mycobacterium tuberculosis.
Medecine Et Maladies Infectieuses 2017, 47, 340-348.

Perrineau S, Cazals-Hatem D, Zarrouk V, Fantin B, de Lastours V
Cytomegalovirus-associated protein-losing enteropathy in a healthy man.
Medecine Et Maladies Infectieuses 2017, 47, 562-565.

Fossé Q, Flateau C, Gomart C, Decousser JW, Gallien S
Severe community-acquired Capnocytophaga leadbetteri pneumonia in a HIV-infected patient.
Medecine Et Maladies Infectieuses 2017

Ruppé E, Greub G, Schrenzel J
Messages from the first International Conference on Clinical Metagenomics (ICCMg).
Microbes and Infection 2017, 19, 223-228.

Charfi K, Grami R, Ben Jeddou A, Messaoudi A, Mani Y, Bouallegue O, Boujaafar N, Aouni M, Mammeri H, Mansour W
Extended-spectrum β-lactamases and plasmid-mediated quinolone resistance in enterobacterial clinical isolates from neonates in Tunisia.
Microbial Pathogenesis 2017, 110, 184-188.

Atchade E, Jean-Baptiste S, Houzé S, Chabut C, Massias L, Castier Y, Brugière O, Mal H, Montravers P
Fatal invasive aspergillosis caused by Aspergillus niger after bilateral lung transplantation.
Medical Mycology Case Reports 2017, 17, 4-7.

Tashk P, Lecronier M, Clermont O, Renvoisé A, Aubry A, Barrou B, Hertig A, Lescat M, Tenaillon O, Denamur E, Tourret J
[Molecular epidemiology and kinetics of early Escherichia coli urinary tract infections in kidney transplant recipients].
Nephrologie & Therapeutique 2017, 13, 236-244.

Gaudry S, Chaïbi K, Bénichou N, Verney C, Hajage D, Dreyfuss D
[Renal replacement therapy for acute kidney injury in the intensive care unit].
Nephrologie & Therapeutique 2017, 13 Suppl 1, S13-S21.

Tammaro P, Richard N, Andre B, Andremont A, Mammeri H
First report of human infection due to Streptococcus devriesei.
New Microbes and New Infections 2017, 15, 72-73.

Messika J, Nahmani Y, Aouad P, Berquier G, Roux D, Delahousse M
[Renal abnormalities].
La Revue De Medecine Interne 2017

Abbara S, Georgin-Lavialle S, Bachmeyer C, Hermine O, Launay JM, de Lastours V
[Chronic asthenia and abdominal pain in a 26-year-old woman].
La Revue De Medecine Interne 2017, 38, 850-852.

Doré J, Multon MC, Béhier JM, poGXRTN
The human gut microbiome as source of innovation for health: Which physiological and therapeutic outcomes could we expect?.
Therapie 2017, 72, 21-38.

Armand-Lefevre L, Ruppé E, Andremont A
ESBL-producing Enterobacteriaceae in travellers: doctors beware.
The Lancet. Infectious Diseases 2017, 17, 8-9.

Charlier C, Perrodeau É, Leclercq A, Cazenave B, Pilmis B, Henry B, Lopes A, Maury MM, Moura A, Goffinet F, Dieye HB, Thouvenot P, Ungeheuer MN, Tourdjman M, Goulet V, de Valk H, Lortholary O, Ravaud P, Lecuit M, Msg
Clinical features and prognostic factors of listeriosis: the MONALISA national prospective cohort study.
The Lancet. Infectious Diseases 2017, 17, 510-519.

Decousser JW
Prevention of paediatric nosocomial infections: adapting before acting.
The Lancet. Infectious Diseases 2017, 17, 350-351.

Asfar P, Schortgen F, Boisramé-Helms J, Charpentier J, Guérot E, Megarbane B, Grimaldi D, Grelon F, Anguel N, Lasocki S, Henry-Lagarrigue M, Gonzalez F, Legay F, Guitton C, Schenck M, Doise JM, Devaquet J, Van Der Linden T, Chatellier D, Rigaud JP, Dellamonica J, Tamion F, Meziani F, Mercat A, Dreyfuss D, Seegers V, Radermacher P, HI, Rrn
Hyperoxia and hypertonic saline in patients with septic shock (HYPERS2S): a two-by-two factorial, multicentre, randomised, clinical trial.
The Lancet. Respiratory Medicine 2017, 5, 180-190.

Laffey JG, Madotto F, Bellani G, Pham T, Fan E, Brochard L, Amin P, Arabi Y, Bajwa EK, Bruhn A, Cerny V, Clarkson K, Heunks L, Kurahashi K, Laake JH, Lorente JA, McNamee L, Nin N, Palo JE, Piquilloud L, Qiu H, Jiménez JIS, Esteban A, McAuley DF, van Haren F, Ranieri M, Rubenfeld G, Wrigge H, Slutsky AS, Pesenti A, LSI, ETG
Geo-economic variations in epidemiology, patterns of care, and outcomes in patients with acute respiratory distress syndrome: insights from the LUNG SAFE prospective cohort study.
The Lancet. Respiratory Medicine 2017, 5, 627-638.

Leblanc S, Blein C, Andremont A, Bandinelli PA, Galvain T
Burden of Clostridium difficile Infections in French Hospitals in 2014 From the National Health Insurance Perspective.
Infection Control and Hospital Epidemiology 2017, 38, 906-911.

Clermont O, Couffignal C, Blanco J, Mentré F, Picard B, Denamur E, CaCg
Two levels of specialization in bacteraemic Escherichia coli strains revealed by their comparison with commensal strains.
Epidemiology and Infection 2017, 145, 872-882.

Bernheim A, Calvo-Villamañán A, Basier C, Cui L, Rocha EPC, Touchon M, Bikard D
Inhibition of NHEJ repair by type II-A CRISPR-Cas systems in bacteria.
Nature Communications 2017, 8, 2094.

Bialek-Davenet S, Mayer N, Vergalli J, Duprilot M, Brisse S, Pagès JM, Nicolas-Chanoine MH
In-vivo loss of carbapenem resistance by extensively drug-resistant Klebsiella pneumoniae during treatment via porin expression modification.
Scientific Reports 2017, 7, 6722.

Ruppé E, Lazarevic V, Girard M, Mouton W, Ferry T, Laurent F, Schrenzel J
Clinical metagenomics of bone and joint infections: a proof of concept study.
Scientific Reports 2017, 7, 7718.

Delafont V, Samba-Louaka A, Cambau E, Bouchon D, Moulin L, Héchard Y
Mycobacterium llatzerense, a waterborne Mycobacterium, that resists phagocytosis by Acanthamoeba castellanii.
Scientific Reports 2017, 7, 46270.

Dreyfuss D, Hajage D, Gaudry S
Why ELAIN and AKIKI Should Not Be Compared: Resolving Discordant Studies.
American Journal of Kidney Diseases: The Official Journal of the National Kidney Foundation 2017, 69, 864.

Decousser JW, Poirel L, Nordmann P
Recent advances in biochemical and molecular diagnostics for the rapid detection of antibiotic-resistant Enterobacteriaceae: a focus on ß-lactam resistance.
Expert Review of Molecular Diagnostics 2017, 17, 327-350.

Dufour N, Delattre R, Ricard JD, Debarbieux L
The Lysis of Pathogenic Escherichia coli by Bacteriophages Releases Less Endotoxin Than by β-Lactams.
Clinical Infectious Diseases: An Official Publication of the Infectious Diseases Society of America 2017, 64, 1582-1588.

Duval X, Millot S, Chirouze C, Selton-Suty C, Moby V, Tattevin P, Strady C, Euvrard E, Agrinier N, Thomas D, Hoen B, Alla F, EdAplelPdlI(SG
Oral Streptococcal Endocarditis, Oral Hygiene Habits, and Recent Dental Procedures: A Case-Control Study.
Clinical Infectious Diseases: An Official Publication of the Infectious Diseases Society of America 2017, 64, 1678-1685.

Rivoisy C, Vena A, Schaeffer L, Charlier C, Fontanet A, Delahaye F, Bouza E, Lortholary O, Munoz P, Lefort A, FMSG&GdAaMdlEe(
Prosthetic valve Candida spp. endocarditis: new insights into long term prognosis - the ESCAPE study.
Clinical Infectious Diseases: An Official Publication of the Infectious Diseases Society of America 2017

Straker L, Mountain J, Jacques A, White S, Smith A, Landau L, Stanley F, Newnham J, Pennell C, Eastwood P
Cohort Profile: The Western Australian Pregnancy Cohort (Raine) Study-Generation 2.
International Journal of Epidemiology 2017, 46, 1384-1385j.

Duprilot M, Decre D, Genel N, Drieux L, Sougakoff W, Arlet G
Diversity and functionality of plasmid-borne VagCD toxin-antitoxin systems of Klebsiella pneumoniae.
The Journal of Antimicrobial Chemotherapy 2017

Cecchini J, Tuffet S, Sonneville R, Fartoukh M, Mayaux J, Roux D, Kouatchet A, Boissier F, Tchir M, Thyrault M, Maury E, Jochmans S, Mekontso Dessap A, Brun-Buisson C, de Prost N
Antimicrobial strategy for severe community-acquired legionnaires' disease: a multicentre retrospective observational study.
The Journal of Antimicrobial Chemotherapy 2017, 72, 1502-1509.

Mougari F, Loiseau J, Veziris N, Bernard C, Bercot B, Sougakoff W, Jarlier V, Raskine L, Cambau E, FNRCfM
Evaluation of the new GenoType NTM-DR kit for the molecular detection of antimicrobial resistance in non-tuberculous mycobacteria.
The Journal of Antimicrobial Chemotherapy 2017, 72, 1669-1677.

de Lastours V, Maugy E, Mathy V, Chau F, Rossi B, Guérin F, Cattoir V, Fantin B, CSG
Ecological impact of ciprofloxacin on commensal enterococci in healthy volunteers.
The Journal of Antimicrobial Chemotherapy 2017, 72, 1574-1580.

Birgy A, Delecourt M, Geslain G, Desselas E, Caseris M, Magnan M, Mariani-Kurkdjian P, Bidet P, Bonacorsi S
A combination of mecillinam and amoxicillin/clavulanate can restore susceptibility of high-level TEM-1-producing Escherichia coli to mecillinam.
The Journal of Antimicrobial Chemotherapy 2017, 72, 1911-1914.

Mani Y, Mansour W, Mammeri H, Denamur E, Saras E, Boujâafar N, Bouallègue O, Madec JY, Haenni M
KPC-3-producing ST167 Escherichia coli from mussels bought at a retail market in Tunisia.
The Journal of Antimicrobial Chemotherapy 2017, 72, 2403-2404.

Robin C, Lê MP, Melica G, Massias L, Redjoul R, Khoudour N, Leclerc M, Beckerich F, Maury S, Hulin A, Cordonnier C
Plasma concentrations of atovaquone given to immunocompromised patients to prevent Pneumocystis jirovecii.
The Journal of Antimicrobial Chemotherapy 2017, 72, 2602-2606.

Ruppé E, Chappuis F
What and how should we tell travellers about antimicrobial resistance?.
Journal of Travel Medicine 2017, 24,

Woerther PL, Andremont A, Kantele A
Travel-acquired ESBL-producing Enterobacteriaceae: impact of colonization at individual and community level.
Journal of Travel Medicine 2017, 24, S29-S34.

Billard-Pomares T, Rouyer C, Walewski V, Badell-Ocando E, Dumas M, Zumelzu C, Jaureguy F, Brisse S, Caux F, Bouchaud O, Carbonnelle E
Diagnosis in France of a Non-Toxigenic tox Gene-Bearing Strain of Corynebacterium diphtheriae in a Young Male Back From Senegal.
Open Forum Infectious Diseases 2017, 4, ofw271.

Dres M, Roux D, Pham T, Beurton A, Ricard JD, Fartoukh M, Demoule A
Prevalence and Impact on Weaning of Pleural Effusion at the Time of Liberation from Mechanical Ventilation: A Multicenter Prospective Observational Study.
Anesthesiology 2017, 126, 1107-1115.

Dreyfuss D, Saumon G
What Is the Role of Cytokines during Ventilator-induced Lung Injury?.
Anesthesiology 2017, 127, 1041-1042.

Roca O, García-de-Acilu M, Ricard JD
High-Flow Nasal Cannula Meta-Analysis: Do Not Mix Apples and Oranges!.
Critical Care Medicine 2017, 45, e244.

Prat D, Messika J, Ricard JD, Sztrymf B
Meta-Analysis of Bowel Protocols in Critical Care Patients: A Word of Caution.
Critical Care Medicine 2017, 45, e990.

Richaud C, De Lastours V, Panhard X, Petrover D, Bruno F, Lefort A
Candida vertebral osteomyelitis (CVO) 28 cases from a 10-year retrospective study in France.
Medicine 2017, 96, e7525.

Sellier PO, Maylin S, Berçot B, Chopin D, Lopes A, Simoneau G, Evans J, Delcey V, Bénifla JL, Simon F, Bergmann JF
Prospective interventional study of tenofovir in pregnancy to prevent vertical transmission of hepatitis B in highly viremic women.
European Journal of Gastroenterology & Hepatology 2017, 29, 259-263.

Messika J, Goutorbe P, Hajage D, Ricard JD
Severe pulmonary embolism managed with high-flow nasal cannula oxygen therapy.
European Journal of Emergency Medicine: Official Journal of the European Society for Emergency Medicine 2017, 24, 230-232.

Messika J, Clermont O, Landraud L, Schmidt M, Aubry A, Sougakoff W, Fernandes R, Combes A, Denamur E, Ricard JD
Extra-corporeal membrane oxygenation-associated infections: implication of extra-intestinal pathogenic Escherichia coli clones.
Journal of Medical Microbiology 2017, 66, 1189-1195.

Bouvet O, Bourdelier E, Glodt J, Clermont O, Denamur E
Diversity of the auxotrophic requirements in natural isolates of Escherichia coli.
Microbiology (Reading, England) 2017, 163, 891-899.

Bouvet O, Bourdelier E, Glodt J, Clermont O, Denamur E
Erratum: Diversity of the auxotrophic requirements in natural isolates of Escherichia coli.
Microbiology (Reading, England) 2017, 163, 1260-1261.

Arfi A, Cohen R, Varon E, Béchet S, Bonacorsi S, Levy C
Case-control study shows that neonatal pneumococcal meningitis cannot be distinguished from group B Streptococcus cases.
Acta Paediatrica (Oslo, Norway: 1992) 2017, 106, 1915-1918.

de Risi-Pugliese T, Servy A, Decousser JW, Nebbad B, Desroches M, Wolkenstein P, de Prost N, Chosidow O
Skin biopsy polymerase chain reaction for rapid microbiological diagnosis in patients with purpura fulminans.
The British Journal of Dermatology 2017, 177, e154-e155.

Audureau E, Hua C, de Prost N, Hemery F, Decousser JW, Bosc R, Lepeule R, Chosidow O, Sbidian E, HMHNFg
Mortality of necrotizing fasciitis: relative influence of individual and hospital-level factors, a nationwide multilevel study, France, 2007-12.
The British Journal of Dermatology 2017, 177, 1575-1582.

Feuillet P, Lert F, Tron L, Aubriere C, Spire B, Dray-Spira R, ANdRslSelHV(VEslpa(SG
Prevalence of and factors associated with depression among people living with HIV in France.
HIV medicine 2017, 18, 383-394.

Ploton MC, Gaschignard J, Lemaitre C, Cadennes A, Germanaud D, Poncelet G, Bidet P, Faye A, Basmaci R
Salmonella Typhimurium bacteraemia complicated by meningitis and brain abscess in a 3-month-old boy.
Journal of Paediatrics and Child Health 2017, 53, 204-205.

Chomton M, Emeriaud G, Bidet P, Rallu F, Ovetchkine P, Gaschignard J
Group A streptococcal primary peritonitis in a healthy girl.
Journal of Paediatrics and Child Health 2017, 53, 615-616.

Lescat M, Launay A, Ghalayini M, Magnan M, Glodt J, Pintard C, Dion S, Denamur E, Tenaillon O
Using long-term experimental evolution to uncover the patterns and determinants of molecular evolution of an Escherichia coli natural isolate in the streptomycin-treated mouse gut.
Molecular Ecology 2017, 26, 1802-1817.

Dupont H, Choinier P, Roche D, Adiba S, Sookdeb M, Branger C, Denamur E, Mammeri H
Structural Alteration of OmpR as a Source of Ertapenem Resistance in a CTX-M-15-Producing Escherichia coli O25b:H4 Sequence Type 131 Clinical Isolate.
Antimicrobial Agents and Chemotherapy 2017, 61,

Burdet C, Sayah-Jeanne S, Nguyen TT, Miossec C, Saint-Lu N, Pulse M, Weiss W, Andremont A, Mentré F, de Gunzburg J
Protection of Hamsters from Mortality by Reducing Fecal Moxifloxacin Concentration with DAV131A in a Model of Moxifloxacin-Induced Clostridium difficile Colitis.
Antimicrobial Agents and Chemotherapy 2017, 61,

Mougari F, Bouziane F, Crockett F, Nessar R, Chau F, Veziris N, Sapriel G, Raskine L, Cambau E
Selection of Resistance to Clarithromycin in Mycobacterium abscessus Subspecies.
Antimicrobial Agents and Chemotherapy 2017, 61,

Robin F, Beyrouthy R, Bonacorsi S, Aissa N, Bret L, Brieu N, Cattoir V, Chapuis A, Chardon H, Degand N, Doucet-Populaire F, Dubois V, Fortineau N, Grillon A, Lanotte P, Leyssene D, Patry I, Podglajen I, Recule C, Ros A, Colomb-Cotinat M, Ponties V, Ploy MC, Bonnet R
Inventory of Extended-Spectrum-β-Lactamase-Producing Enterobacteriaceae in France as Assessed by a Multicenter Study.
Antimicrobial Agents and Chemotherapy 2017, 61,

Massot M, Couffignal C, Clermont O, D'Humières C, Chatel J, Plault N, Andremont A, Caron A, Mentré F, Denamur E
Day-to-Day Dynamics of Commensal Escherichia coli in Zimbabwean Cows Evidence Temporal Fluctuations within a Host-Specific Population Structure.
Applied and Environmental Microbiology 2017, 83,

Roux D, Weatherholt M, Clark B, Gadjeva M, Renaud D, Scott D, Skurnik D, Priebe GP, Pier G, Gerard C, Yoder-Himes DR
Immune Recognition of the Epidemic Cystic Fibrosis Pathogen Burkholderia dolosa.
Infection and Immunity 2017, 85,

Leyer C, Gregorowicz G, Mougari F, Raskine L, Cambau E, de Briel D
Comparison of Saramis 4.12 and IVD 3.0 Vitek MS Matrix-Assisted Laser Desorption Ionization-Time of Flight Mass Spectrometry for Identification of Mycobacteria from Solid and Liquid Culture Media.
Journal of Clinical Microbiology 2017, 55, 2045-2054.

Dupieux C, Bouchiat C, Larsen AR, Pichon B, Holmes M, Teale C, Edwards G, Hill R, Decousser JW, Trouillet-Assant S, Petersen A, Skov R, Kearns A, Laurent F
Detection of mecC-Positive Staphylococcus aureus: What To Expect from Immunological Tests Targeting PBP2a?.
Journal of Clinical Microbiology 2017, 55, 1961-1963.

Bidet P, Tran Quang V, Yagusky P, Birgy A, Bonacorsi S, Basmaci R
Investigation of Kingella kingae Invasive Infection Outbreaks in Day Care Facilities: Assessment of a Rapid Genotyping Tool Targeting the DNA Uptake Sequence.
Journal of Clinical Microbiology 2017, 55, 2422-2430.

El Houmami N, Bzdrenga J, Durand GA, Minodier P, Seligmann H, Prudent E, Bakour S, Bonacorsi S, Raoult D, Yagupsky P, Fournier PE
Molecular Tests That Target the RTX Locus Do Not Distinguish between Kingella kingae and the Recently Described Kingella negevensis Species.
Journal of Clinical Microbiology 2017, 55, 3113-3122.

Kolenda C, Dupieux C, Decousser JW, Larsen AR, Pichon B, Holmes M, Bès M, Teale C, Dickson E, Hill R, Skov R, Kearns A, Laurent F
Comparison of Automated Antimicrobial Susceptibility Testing Systems To DetectmecC-Positive Methicillin-Resistant Staphylococcus aureus.
Journal of Clinical Microbiology 2017, 55, 3554-3556.

Aubry A, Mougari F, Reibel F, Cambau E
Mycobacterium marinum.
Microbiology Spectrum 2017

Gordon DM, Geyik S, Clermont O, O'Brien CL, Huang S, Abayasekara C, Rajesh A, Kennedy K, Collignon P, Pavli P, Rodriguez C, Johnston BD, Johnson JR, Decousser JW, Denamur E
Fine-Scale Structure Analysis Shows Epidemic Patterns of Clonal Complex 95, a Cosmopolitan Escherichia coli Lineage Responsible for Extraintestinal Infection.
mSphere 2017

Aupiais C, Basmaci R, Ilharreborde B, Blachier A, Desmarest M, Job-Deslandre C, Faye A, Bonacorsi S, Alberti C, Lorrot M
Arthritis in children: comparison of clinical and biological characteristics of septic arthritis and juvenile idiopathic arthritis.
Archives of Disease in Childhood 2017, 102, 316-322.

Kardaś-Słoma L, Lucet JC, Perozziello A, Pelat C, Birgand G, Ruppé E, Boëlle PY, Andremont A, Yazdanpanah Y
Universal or targeted approach to prevent the transmission of extended-spectrum beta-lactamase-producing Enterobacteriaceae in intensive care units: a cost-effectiveness analysis.
BMJ open 2017, 7, e017402.

Frat JP, Ricard JD, Coudroy R, Robert R, Ragot S, Thille AW, oboRn
Preoxygenation with non-invasive ventilation versus high-flow nasal cannula oxygen therapy for intubation of patients with acute hypoxaemic respiratory failure in ICU: the prospective randomised controlled FLORALI-2 study protocol.
BMJ open 2017, 7, e018611.

Gatti G, Perrotti A, Obadia JF, Duval X, Iung B, Alla F, Chirouze C, Selton-Suty C, Hoen B, Sinagra G, Delahaye F, Tattevin P, Le Moing V, Pappalardo A, Chocron S, AftSaPoIESGplelPdlI(
Simple Scoring System to Predict In-Hospital Mortality After Surgery for Infective Endocarditis.
Journal of the American Heart Association 2017

Bellani G, Laffey JG, Pham T, Madotto F, Fan E, Brochard L, Esteban A, Gattinoni L, Bumbasirevic V, Piquilloud L, van Haren F, Larsson A, McAuley DF, Bauer PR, Arabi YM, Ranieri M, Antonelli M, Rubenfeld GD, Thompson BT, Wrigge H, Slutsky AS, Pesenti A, LSI, ETG
Noninvasive Ventilation of Patients with Acute Respiratory Distress Syndrome. Insights from the LUNG SAFE Study.
American Journal of Respiratory and Critical Care Medicine 2017, 195, 67-77.

Emonet S, Lazarevic V, Pugin J, Schrenzel J, Ruppé E
Clinical Metagenomics for the Diagnosis of Hospital-acquired Infections: Promises and Hurdles.
American Journal of Respiratory and Critical Care Medicine 2017, 196, 1617-1618.

Vieillard-Baron A, Dreyfuss D
Ventilator-induced Lung Injury: Follow the Right Direction! Another Piece of the Puzzle in the Ventilator-induced Lung Injury Epic.
American Journal of Respiratory and Critical Care Medicine 2017, 196, 1366-1368.

Dreyfuss D, Gaudry S
Might High-frequency Oscillatory Ventilation Improve Prognosis of More Severe Acute Respiratory Distress Syndrome? Not So Sure.
American Journal of Respiratory and Critical Care Medicine 2017

Veziris N, Bernard C, Guglielmetti L, Le Du D, Marigot-Outtandy D, Jaspard M, Caumes E, Lerat I, Rioux C, Yazdanpanah Y, Tiotiu A, Lemaitre N, Brossier F, Jarlier V, Robert J, Sougakoff W, Aubry A, CMatTCotCM, CMaTCotCM
Rapid emergence of Mycobacterium tuberculosis bedaquiline resistance: lessons to avoid repeating past errors.
The European Respiratory Journal 2017, 49,

Nicolas-Chanoine MH, Petitjean M, Mora A, Mayer N, Lavigne JP, Boulet O, Leflon-Guibout V, Blanco J, Hocquet D
The ST131 Escherichia coli H22 subclone from human intestinal microbiota: Comparison of genomic and phenotypic traits with those of the globally successful H30 subclone.
BMC microbiology 2017, 17, 71.

El Houmami N, Bzdrenga J, Pons JC, Minodier P, Durand GA, Oubraham A, Ceroni D, Yagupsky P, Raoult D, Bidet P, Fournier PE
A modified multilocus sequence typing protocol to genotype Kingella kingae from oropharyngeal swabs without bacterial isolation.
BMC microbiology 2017, 17, 200.

Robert J, Pantel A, Merens A, Meiller E, Lavigne JP, Nicolas-Chanoine MH, Ocrsg
Development of an algorithm for phenotypic screening of carbapenemase-producing Enterobacteriaceae in the routine laboratory.
BMC infectious diseases 2017, 17, 78.

Gaschignard J, Geslain G, Mallet C, Lorrot M, Blot N, Alison M, Bonacorsi S
Spondylodiscitis in a healthy 12-year-old girl with Extraintestinal pathogenic Escherichia coli (ExPEC) bacteraemia.
BMC infectious diseases 2017, 17, 380.

Gaudry S, Sztrymf B, Sonneville R, Megarbane B, Van Der Meersch G, Vodovar D, Cohen Y, Ricard JD, Hajage D, Salomon L, Dreyfuss D
Loxapine to control agitation during weaning from mechanical ventilation.
Critical Care (London, England) 2017, 21, 235.

Gaudry S, Tuffet S, Lukaszewicz AC, Laplace C, Zucman N, Pocard M, Costaglioli B, Msika S, Duranteau J, Payen D, Dreyfuss D, Hajage D, Ricard JD
Prone positioning in acute respiratory distress syndrome after abdominal surgery: a multicenter retrospective study : SAPRONADONF (Study of Ards and PRONe position After abDOmiNal surgery in France).
Annals of Intensive Care 2017, 7, 21.

Carbonne H, Le Dorze M, Bourrel AS, Poupet H, Poyart C, Cambau E, Mira JP, Charpentier J, Amarsy R
Relation between presence of extended-spectrum β-lactamase-producing Enterobacteriaceae in systematic rectal swabs and respiratory tract specimens in ICU patients.
Annals of Intensive Care 2017, 7, 13.

Gaudry S, Messika J, Ricard JD, Guillo S, Pasquet B, Dubief E, Boukertouta T, Dreyfuss D, Tubach F
Patient-important outcomes in randomized controlled trials in critically ill patients: a systematic review.
Annals of Intensive Care 2017, 7, 28.

Razazi K, Mekontso Dessap A, Carteaux G, Jansen C, Decousser JW, de Prost N, Brun-Buisson C
Frequency, associated factors and outcome of multi-drug-resistant intensive care unit-acquired pneumonia among patients colonized with extended-spectrum β-lactamase-producing Enterobacteriaceae.
Annals of Intensive Care 2017, 7, 61.

Delerue T, de Pontual L, Carbonnelle E, Zahar JR
The potential role of microbiota for controlling the spread of extended-spectrum beta-lactamase-producing Enterobacteriaceae (ESBL-PE) in neonatal population.
F1000Research 2017, 6, 1217.

Sangare SA, Rondinaud E, Maataoui N, Maiga AI, Guindo I, Maiga A, Camara N, Dicko OA, Dao S, Diallo S, Bougoudogo F, Andremont A, Maiga II, Armand-Lefevre L
Very high prevalence of extended-spectrum beta-lactamase-producing Enterobacteriaceae in bacteriemic patients hospitalized in teaching hospitals in Bamako, Mali.
PloS One 2017, 12, e0172652.

Cohen JF, Cohen R, Bidet P, Elbez A, Levy C, Bossuyt PM, Chalumeau M
Efficiency of a clinical prediction model for selective rapid testing in children with pharyngitis: A prospective, multicenter study.
PloS One 2017, 12, e0172871.

Guilhem A, Fargeton AE, Simon AC, Duffau P, Harle JR, Lavigne C, Carette MF, Bletry O, Kaminsky P, Leguy V, Lerolle N, Roux D, Lambert M, Chinet T, Bonnet D, Dupuis-Girod S, Rivière S
Intra-venous bevacizumab in hereditary hemorrhagic telangiectasia (HHT): A retrospective study of 46 patients.
PloS One 2017, 12, e0188943.

Schaefers MM, Liao TL, Boisvert NM, Roux D, Yoder-Himes D, Priebe GP
An Oxygen-Sensing Two-Component System in the Burkholderia cepacia Complex Regulates Biofilm, Intracellular Invasion, and Pathogenicity.
PLoS pathogens 2017, 13, e1006116.

Basmaci R, Bonacorsi S
Kingella kingae: From carriage to infection.
CMAJ: Canadian Medical Association journal = journal de l'Association medicale canadienne 2017, 189, E1105-E1106.

Sangaré SA, Maïga AI, Maïga A, Diallo S, Camara N, Savadogo S, Guindo I, Bougoudogo F, Armand-Lefèvre L, Andremont A, Maïga II
Prevalence of extended-spectrum beta-lactamase phenotypes in enterobacteria isolated from blood cultures of patients at admission to the University Hospital of Bamako.
Medecine Et Sante Tropicales 2017, 27, 170-175.

Roux D, van Oort PM, Ricard JD, Bos LDJ
Airway microbiome research: a modern perspective on surveillance cultures?.
Annals of Translational Medicine 2017, 5, 445.

Wuijts S, van den Berg HHJL, Miller J, Abebe L, Sobsey M, Andremont A, Medlicott KO, van Passel MWJ, de Roda Husman AM
Towards a research agenda for water, sanitation and antimicrobial resistance.
Journal of Water and Health 2017, 15, 175-184.

Lotte R, Hérissé AL, Berrouane Y, Lotte L, Casagrande F, Landraud L, Herbin S, Ramarao N, Boyer L, Ruimy R
Virulence Analysis of Bacillus cereus Isolated after Death of Preterm Neonates, Nice, France, 2013.
Emerging Infectious Diseases 2017, 23, 845-848.

Birgy A, Bidet P, Levy C, Sobral E, Cohen R, Bonacorsi S
CTX-M-27-Producing Escherichia coli of Sequence Type 131 and Clade C1-M27, France.
Emerging Infectious Diseases 2017, 23, 885.

Nguyen Y, Rossi B, Argy N, Baker C, Nickel B, Marti H, Zarrouk V, Houzé S, Fantin B, Lefort A
Autochthonous Case of Eosinophilic Meningitis Caused by Angiostrongylus cantonensis, France, 2016.
Emerging Infectious Diseases 2017, 23, 1045-1046.

Delannoy S, Beutin L, Mariani-Kurkdjian P, Fleiss A, Bonacorsi S, Fach P
The Escherichia coli Serogroup O1 and O2 Lipopolysaccharides Are Encoded by Multiple O-antigen Gene Clusters.
Frontiers in Cellular and Infection Microbiology 2017, 7, 30.

Petit F, Clermont O, Delannoy S, Servais P, Gourmelon M, Fach P, Oberlé K, Fournier M, Denamur E, Berthe T
Change in the Structure of Escherichia coli Population and the Pattern of Virulence Genes along a Rural Aquatic Continuum.
Frontiers in Microbiology 2017, 8, 609.

El Houmami N, Ceroni D, Codjo Seignon K, Pons JC, Lambert C, Durand GA, Minodier P, Lamah L, Bidet P, Schrenzel J, Raoult D, Fournier PE
Acute Septic Arthritis of the Knee Caused by Kingella kingae in a 5-Year-Old Cameroonian Boy.
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Ruppé E, Cherkaoui A, Lazarevic V, Emonet S, Schrenzel J
Establishing Genotype-to-Phenotype Relationships in Bacteria Causing Hospital-Acquired Pneumonia: A Prelude to the Application of Clinical Metagenomics.
Antibiotics (Basel, Switzerland) 2017

Leo S, Gaïa N, Ruppé E, Emonet S, Girard M, Lazarevic V, Schrenzel J
Detection of Bacterial Pathogens from Broncho-Alveolar Lavage by Next-Generation Sequencing.
International Journal of Molecular Sciences 2017, 18,

Galardini M, Koumoutsi A, Herrera-Dominguez L, Cordero Varela JA, Telzerow A, Wagih O, Wartel M, Clermont O, Denamur E, Typas A, Beltrao P
Phenotype inference in an Escherichia coli strain panel.
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Faisy C, Meziani F, Planquette B, Clavel M, Gacouin A, Bornstain C, Schneider F, Duguet A, Gibot S, Lerolle N, Ricard JD, Sanchez O, Djibre M, Ricome JL, Rabbat A, Heming N, Urien S, Esvan M, Katsahian S, DI
Effect of Acetazolamide vs Placebo on Duration of Invasive Mechanical Ventilation Among Patients With Chronic Obstructive Pulmonary Disease: A Randomized Clinical Trial.
JAMA 2016, 315, 480-488.

Bellani G, Laffey JG, Pham T, Fan E, Brochard L, Esteban A, Gattinoni L, van Haren F, Larsson A, McAuley DF, Ranieri M, Rubenfeld G, Thompson BT, Wrigge H, Slutsky AS, Pesenti A, LSI, ETG
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JAMA 2016, 315, 788-800.

Guillard T, Pons S, Roux D, Pier GB, Skurnik D
Antibiotic resistance and virulence: Understanding the link and its consequences for prophylaxis and therapy.
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Do Vale J, Mezhari I, Oker N, Roux D
Keep an ear to the ground, the answer's behind.
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Deniau B, Ricard JD, Messika J, Dreyfuss D, Gaudry S
Use of extracorporeal carbon dioxide removal (ECCO2R) in 239 intensive care units: results from a French national survey.
Intensive Care Medicine 2016, 42, 624-625.

Papazian L, Corley A, Hess D, Fraser JF, Frat JP, Guitton C, Jaber S, Maggiore SM, Nava S, Rello J, Ricard JD, Stephan F, Trisolini R, Azoulay E
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Intensive Care Medicine 2016, 42, 1336-1349.

Laupland KB, Ruppé E, Harbarth S
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Lepelletier D, Pinaud V, Le Conte P, Bourigault C, Asseray N, Ballereau F, Caillon J, Ferron C, Righini C, Batard E, Potel G, FPSG
Peritonsillar abscess (PTA): clinical characteristics, microbiology, drug exposures and outcomes of a large multicenter cohort survey of 412 patients hospitalized in 13 French university hospitals.
European Journal of Clinical Microbiology & Infectious Diseases: Official Publication of the European Society of Clinical Microbiology 2016, 35, 867-873.

Verriere B, Sabatier B, Carbonnelle E, Mainardi JL, Prognon P, Whitaker I, Lantieri L, Hivelin M
Medicinal leech therapy and Aeromonas spp. infection.
European Journal of Clinical Microbiology & Infectious Diseases: Official Publication of the European Society of Clinical Microbiology 2016, 35, 1001-1006.

Lepelletier D, Pinaud V, Le Conte P, Bourigault C, Asseray N, Ballereau F, Caillon J, Ferron C, Righini C, Batard E, Potel G, FPSG
Is there an association between prior anti-inflammatory drug exposure and occurrence of peritonsillar abscess (PTA)? A national multicenter prospective observational case-control study.
European Journal of Clinical Microbiology & Infectious Diseases: Official Publication of the European Society of Clinical Microbiology 2016

Lepere V, Messika J, La Combe B, Ricard JD
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Salmona M, Jolivet S, Duprilot M, Akpabie AC, Fourati S, Decousser JW
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Marinosci A, Doit C, Koehl B, Belhacel K, Mariani Kurkdjian P, Melki I, Renaud A, Lemaitre C, Ammar Khodja N, Blachier A, Bonacorsi S, Faye A, Lorrot M
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Bernard J, Armand-Lefèvre L, Luce E, El Mniai A, Chau F, Casalino E, Andremont A, Ruppé E
Impact of a short exposure to levofloxacin on faecal densities and relative abundance of total and quinolone-resistant Enterobacteriaceae.
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de Rougemont A, Kaplon J, Fremy C, Legrand-Guillien MC, Minoui-Tran A, Payan C, Vabret A, Mendes-Martins L, Chouchane M, Maudinas R, Huet F, Dubos F, Hober D, Lazrek M, Bouquignaud C, Decoster A, Alain S, Languepin J, Gillet Y, Lina B, Mekki Y, Morfin-Sherpa F, Guigon A, Guinard J, Foulongne V, Rodiere M, Avettand-Fenoel V, Bonacorsi S, Garbarg-Chenon A, Gendrel D, Lebon P, Lorrot M, Mariani P, Meritet JF, Schnuriger A, Agius G, Beby-Defaux A, Oriot D, Colimon R, Lagathu G, Mory O, Pillet S, Pozzetto B, Stephan JL, Aho S, Pothier P, FNRN
Clinical severity and molecular characteristics of circulating and emerging rotaviruses in young children attending hospital emergency departments in France.
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Plainvert C, Doloy A, Joubrel C, Maataoui N, Dmytruk N, Touak G, Collobert G, Fouet A, Poyart C, Loubinoux J
Characterization of Streptococcus pyogenes isolates responsible for adult meningitis in France from 2003 to 2013.
Diagnostic Microbiology and Infectious Disease 2016, 84, 350-352.

Jauréguy F, Chariot P, Vessières A, Picard B
Prevalence of Chlamydia trachomatis and Neisseria gonorrhoeae infections detected by real-time PCR among individuals reporting sexual assaults in the Paris, France area.
Forensic Science International 2016, 266, 130-133.

Sauget M, Cholley P, Vannier A, Thouverez M, Nicolas-Chanoine MH, Hocquet D, Bertrand X
Trends of extended-spectrum β-lactamase-producing Escherichia coli sequence type 131 and its H30 subclone in a French hospital over a 15-year period.
International Journal of Antimicrobial Agents 2016, 48, 744-747.

Messika J, Ricard JD
Evaluation of risk factors for high flow nasal oxygen failure: a means to avoid disillusion.
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Roca O, Messika J, Caralt B, García-de-Acilu M, Sztrymf B, Ricard JD, Masclans JR
Predicting success of high-flow nasal cannula in pneumonia patients with hypoxemic respiratory failure: The utility of the ROX index.
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Fernández J, Bert F, Nicolas-Chanoine MH
The challenges of multi-drug-resistance in hepatology.
Journal of Hepatology 2016, 65, 1043-1054.

Jolivet S, Fines-Guyon M, Nebbad B, Merle JC, Le Pluart D, Brun-Buisson C, Decousser JW, Cattoir V
First nosocomial outbreak of vanA-type vancomycin-resistant Enterococcus raffinosus in France.
The Journal of Hospital Infection 2016, 94, 346-350.

Lepelletier C, Salmona M, Berçot B, Maylin S, Sellier PO
First description of past Hepatitis B Virus infection acute reactivation occurring in a Human Immunodeficiency Virus infected patient as manifestation of immune reconstitution inflammatory syndrome.
Journal of Infection and Chemotherapy: Official Journal of the Japan Society of Chemotherapy 2016

Le Bourgeois F, Germanaud D, Bendavid M, Bonnefoy R, Desnous B, Beyler C, Blauwblomme T, Elmaleh M, Pierron C, Lorrot M, Bonacorsi S, Basmaci R
Kingella kingae Sequence Type 25 Causing Endocarditis with Multiple and Severe Cerebral Complications.
The Journal of Pediatrics 2016, 169, 326-326.e1.

Buzelé R, Barbier L, Sauvanet A, Fantin B
Medical complications following splenectomy.
Journal of Visceral Surgery 2016, 153, 277-286.

Jolly D, Ambrosi P, Chaffanjon P, Dreyfuss D, Le Jeunne C, Lorette G, Obert L, Palombi O, Romanet JP
[Results of the 2015 national ranking in France].
Presse Medicale (Paris, France: 1983) 2016, 45, 133-142.

Briand C, Levy C, Baumie F, Joao L, Béchet S, Carbonnelle E, Grimprel E, Cohen R, Gaudelus J, de Pontual L
Outcomes of bacterial meningitis in children.
Médecine Et Maladies Infectieuses 2016, 46, 177-187.

Poirier C, Dinh A, Salomon J, Grall N, Andremont A, Bernard L
Prevention of urinary tract infections by antibiotic cycling in spinal cord injury patients and low emergence of multidrug resistant bacteria.
Médecine Et Maladies Infectieuses 2016, 46, 294-299.

Isnard-Bagnis C, Aloy B, Deray G, Tourret J
[Tenofovir nephrotoxicity].
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Tourret J, Hertig A
[The inner life of Lactobacillus].
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Walewski V, Méchaï F, Billard-Pomares T, Juguet W, Jauréguy F, Picard B, Tandjaoui-Lambiotte Y, Carbonnelle E, Bouchaud O
MALDI-TOF MS contribution to diagnosis of melioidosis in a nonendemic country in three French travellers.
New Microbes and New Infections 2016, 12, 31-34.

Collarino R, Vergeylen U, Emeraud C, Latournèrie G, Grall N, Mammeri H, Messika-Zeitoun D, Vallois D, Yazdanpanah Y, Lescure FX, Bleibtreu A
Mitral endocarditis due to Rothia aeria with cerebral haemorrhage and femoral mycotic aneurysms, first French description.
New Microbes and New Infections 2016, 13, 40-42.

de Lastours V, Fantin B
[Pyogenic brain abscesses in adults].
La Revue De Medecine Interne / Fondee ... Par La Societe Nationale Francaise De Medecine Interne 2016

Roux D, Meyer G, Cymbalista F, Bouaziz JD, Falgarone G, Tesniere A, Gervais J, Cariou A, Peffault de Latour R, Marat M, Moenaert E, Guebli T, Rodriguez O, Lefort A, Dreyfuss D, Hajage D, Ricard JD
[Computerized ranking test in three French universities: Staff experience and students' feedback].
La Revue De Médecine Interne / Fondée ... Par La Société Nationale Francaise De Médecine Interne 2016, 37, 166-172.

Rossi G, Lafont E, Gasperini L, Dokmak S, Ronot M, Rossi B, Zarrouk V, Fantin B, Lefort A
[Liver abscess].
La Revue De Medecine Interne 2016, 37, 827-833.

Florea AM, Iordache TV, Branger C, Ghiurea M, Avramescu S, Hubca G, Sârbu A
An innovative approach to prepare hypericin molecularly imprinted pearls using a "phyto-template".
Talanta 2016, 148, 37-45.

Brossier F, Cambau E, Tessier E, Jarlier V, Sougakoff W
The in vitro mechanisms of isoniazid and ethionamide resistance poorly reflect those in vivo in Mycobacterium tuberculosis.
Tuberculosis (Edinburgh, Scotland) 2016, 101, 144-145.

Cohen R, Varon E, Béchet S, Bonacorsi S, Levy C
Comparative impact of pneumococcal conjugate vaccines on pneumococcal meningitis according to underlying conditions.
Vaccine 2016

Ruppé E, Chatelier EL, Pons N, Andremont A, Ehrlich SD
Dissemination of the mcr-1 colistin resistance gene.
The Lancet. Infectious Diseases 2016, 16, 290-291.

Frat JP, Ragot S, Girault C, Perbet S, Prat G, Boulain T, Demoule A, Ricard JD, Coudroy R, Robert R, Mercat A, Brochard L, Thille AW, Rn
Effect of non-invasive oxygenation strategies in immunocompromised patients with severe acute respiratory failure: a post-hoc analysis of a randomised trial.
The Lancet. Respiratory Medicine 2016, 4, 646-652.

Pelat C, Kardaś-Słoma L, Birgand G, Ruppé E, Schwarzinger M, Andremont A, Lucet JC, Yazdanpanah Y
Hand Hygiene, Cohorting, or Antibiotic Restriction to Control Outbreaks of Multidrug-Resistant Enterobacteriaceae.
Infection Control and Hospital Epidemiology 2016, 37, 272-280.

DE Lastours V, Malosh R, Ramadugu K, Srinivasan U, Dawid S, Ohmit S, Foxman B
Co-colonization by Streptococcus pneumoniae and Staphylococcus aureus in the throat during acute respiratory illnesses.
Epidemiology and Infection 2016, 1-13.

Njamkepo E, Fawal N, Tran-Dien A, Hawkey J, Strockbine N, Jenkins C, Talukder KA, Bercion R, Kuleshov K, Kolínská R, Russell JE, Kaftyreva L, Accou-Demartin M, Karas A, Vandenberg O, Mather AE, Mason CJ, Page AJ, Ramamurthy T, Bizet C, Gamian A, Carle I, Sow AG, Bouchier C, Wester AL, Lejay-Collin M, Fonkoua MC, Hello SL, Blaser MJ, Jernberg C, Ruckly C, Mérens A, Page AL, Aslett M, Roggentin P, Fruth A, Denamur E, Venkatesan M, Bercovier H, Bodhidatta L, Chiou CS, Clermont D, Colonna B, Egorova S, Pazhani GP, Ezernitchi AV, Guigon G, Harris SR, Izumiya H, Korzeniowska-Kowal A, Lutyńska A, Gouali M, Grimont F, Langendorf C, Marejková M, Peterson LAM, Perez-Perez G, Ngandjio A, Podkolzin A, Souche E, Makarova M, Shipulin GA, Ye C, Žemličková H, Herpay M, Grimont PAD, Parkhill J, Sansonetti P, Holt KE, Brisse S, Thomson NR, Weill FX
Global phylogeography and evolutionary history of Shigella dysenteriae type 1.
Nature Microbiology 2016, 1, 16027.

Gaudry S, Hajage D, Dreyfuss D
Initiation of Renal-Replacement Therapy in the Intensive Care Unit.
The New England Journal of Medicine 2016, 375, 1901-1902.

Gaudry S, Hajage D, Schortgen F, Martin-Lefevre L, Pons B, Boulet E, Boyer A, Chevrel G, Lerolle N, Carpentier D, de Prost N, Lautrette A, Bretagnol A, Mayaux J, Nseir S, Megarbane B, Thirion M, Forel JM, Maizel J, Yonis H, Markowicz P, Thiery G, Tubach F, Ricard JD, Dreyfuss D, ASG
Initiation Strategies for Renal-Replacement Therapy in the Intensive Care Unit.
The New England Journal of Medicine 2016, 375, 122-133.

Mougari F, Guglielmetti L, Raskine L, Sermet-Gaudelus I, Veziris N, Cambau E
Infections caused by Mycobacterium abscessus: epidemiology, diagnostic tools and treatment.
Expert Review of Anti-Infective Therapy 2016, 14, 1139-1154.

Galy A, Decousser JW, El-Anbassi S, Nebbad B, Belzunce C, Cochennec F, Deforges L, Lepeule R
Psoas abscess and chronic Q fever: a contiguous or hematogenous complication? A case report and literature review.
Infectious Diseases (London, England) 2016, 48, 626-631.

Coussement J, Lebeaux D, van Delden C, Guillot H, Freund R, Marbus S, Melica G, Van Wijngaerden E, Douvry B, Van Laecke S, Vuotto F, Tricot L, Fernández-Ruiz M, Dantal J, Hirzel C, Jais JP, Rodriguez-Nava V, Lortholary O, Jacobs F, ESGfNiSOT
Nocardia Infection in Solid Organ Transplant Recipients: A Multicenter European Case-control Study.
Clinical Infectious Diseases: An Official Publication of the Infectious Diseases Society of America 2016, 63, 338-345.

Collignon PC, Conly JM, Andremont A, McEwen SA, Aidara-Kane A, WHOAGBMoISoAR(A, Agerso Y, Andremont A, Collignon P, Conly J, Dang Ninh T, Donado-Godoy P, Fedorka-Cray P, Fernandez H, Galas M, Irwin R, Karp B, Matar G, McDermott P, McEwen S, Mitema E, Reid-Smith R, Scott HM, Singh R, DeWaal CS, Stelling J, Toleman M, Watanabe H, Woo GJ
World Health Organization Ranking of Antimicrobials According to Their Importance in Human Medicine: A Critical Step for Developing Risk Management Strategies to Control Antimicrobial Resistance From Food Animal Production.
Clinical Infectious Diseases: An Official Publication of the Infectious Diseases Society of America 2016, 63, 1087-1093.

Iung B, Doco-Lecompte T, Chocron S, Strady C, Delahaye F, Le Moing V, Poyart C, Alla F, Cambau E, Tattevin P, Chirouze C, Obadia JF, Duval X, Hoen B, ASG
Cardiac surgery during the acute phase of infective endocarditis: discrepancies between European Society of Cardiology guidelines and practices.
European Heart Journal 2016, 37, 840-848.

Jayol A, Janvier F, Guillard T, Chau F, Mérens A, Robert J, Fantin B, Berçot B, Cambau E
qnrA6 genetic environment and quinolone resistance conferred on Proteus mirabilis.
The Journal of Antimicrobial Chemotherapy 2016, 71, 903-908.

Skurnik D, Roux D, Pons S, Guillard T, Lu X, Cywes-Bentley C, Pier GB
Extended-spectrum antibodies protective against carbapenemase-producing Enterobacteriaceae.
The Journal of Antimicrobial Chemotherapy 2016

Jost C, Bidet P, Carrère T, Mariani-Kurkdjian P, Bonacorsi S
Susceptibility of enterohaemorrhagic Escherichia coli to azithromycin in France and analysis of resistance mechanisms.
The Journal of Antimicrobial Chemotherapy 2016, 71, 1183-1187.

Alexandre K, Chau F, Guérin F, Massias L, Lefort A, Cattoir V, Fantin B
Activity of temocillin in a lethal murine model of infection of intra-abdominal origin due to KPC-producing Escherichia coli.
The Journal of Antimicrobial Chemotherapy 2016

Mougari F, Amarsy R, Veziris N, Bastian S, Brossier F, Berçot B, Raskine L, Cambau E
Standardized interpretation of antibiotic susceptibility testing and resistance genotyping for Mycobacterium abscessus with regard to subspecies and erm41 sequevar.
The Journal of Antimicrobial Chemotherapy 2016, 71, 2208-2212.

Belkacem A, Jacquier H, Goubard A, Mougari F, La Ruche G, Patey O, Micaëlo M, Semaille C, Cambau E, Bercot B
Molecular epidemiology and mechanisms of resistance of azithromycin-resistant Neisseria gonorrhoeae isolated in France during 2013-14.
The Journal of Antimicrobial Chemotherapy 2016, 71, 2471-2478.

Birgy A, Levy C, Bidet P, Thollot F, Derkx V, Béchet S, Mariani-Kurkdjian P, Cohen R, Bonacorsi S
ESBL-producing Escherichia coli ST131 versus non-ST131: evolution and risk factors of carriage among French children in the community between 2010 and 2015.
The Journal of Antimicrobial Chemotherapy 2016, 71, 2949-2956.

Dufour N, Clermont O, La Combe B, Messika J, Dion S, Khanna V, Denamur E, Ricard J, Debarbieux L, ColoColi group
Bacteriophage LM33_P1, a fast-acting weapon against the pandemic ST131-O25b:H4 Escherichia coli clonal complex..
Journal of Antimicrobial Chemotherapy 2016, 71, 3072.

Skurnik D, Clermont O, Guillard T, Launay A, Danilchanka O, Pons S, Diancourt L, Lebreton F, Kadlec K, Roux D, Jiang D, Dion S, Ashard H, Denamur M, Cywes-Bentley C, Schwarz S, Tenaillon O, Andremont A, Picard B, Mekalanos J, Brisse S, Denamur E
Emergence of Antimicrobial-Resistant Escherichia coli of Animal Origin Spreading in Humans.
Molecular Biology and Evolution 2016, 33, 898.

Feugeas JP, Tourret J, Launay A, Bouvet O, Hoede C, Denamur E, Tenaillon O
Links between Transcription, Environmental Adaptation and Gene Variability in Escherichia coli: Correlations between Gene Expression and Gene Variability Reflect Growth Efficiencies.
Molecular Biology and Evolution 2016

Guégan S, Garcia-Hermoso D, Sitbon K, Ahmed S, Moguelet P, Dromer F, Lortholary O, FMSG
Ten-Year Experience of Cutaneous and/or Subcutaneous Infections Due to Coelomycetes in France.
Open Forum Infectious Diseases 2016, 3, ofw106.

Roux D, Pons S, Guillard T, Ricard JD, Pier GB, Skurnik D
Impact of Drug Resistance on Virulence and Fitness of Bacterial Pathogens.
Critical Care Medicine 2016, 44, e50.

El Houmami N, Minodier P, Dubourg G, Mirand A, Jouve JL, Basmaci R, Charrel R, Bonacorsi S, Yagupsky P, Raoult D, Fournier PE
Patterns of Kingella kingae Disease Outbreaks.
The Pediatric Infectious Disease Journal 2016, 35, 340-346.

Audemard-Verger A, Descloux E, Ponard D, Deroux A, Fantin B, Fieschi C, John M, Bouldouyre A, Karkowsi L, Moulis G, Auvinet H, Valla F, Lechiche C, Davido B, Martinot M, Biron C, Lucht F, Asseray N, Froissart A, Buzelé R, Perlat A, Boutboul D, Fremeaux-Bacchi V, Isnard S, Bienvenu B
Infections Revealing Complement Deficiency in Adults: A French Nationwide Study Enrolling 41 Patients.
Medicine 2016, 95, e3548.

Desgrees-du-Lou A, Pannetier J, Ravalihasy A, Le Guen M, Gosselin A, Panjo H, Bajos N, Lydie N, Lert F, Dray-Spira R, PSG
Is hardship during migration a determinant of HIV infection? Results from the ANRS PARCOURS study of sub-Saharan African migrants in France.
AIDS (London, England) 2016, 30, 645-656.

Cabaret O, Bonnal C, Canoui-Poitrine F, Emirian A, Bizouard G, Levesque E, Maitre B, Fihman V, Decousser JW, Botterel F
Concomitant presence of Aspergillus fumigatus and Stenotrophomonas maltophilia in the respiratory tract: a new risk for patients with liver disease?.
Journal of Medical Microbiology 2016

Massot M, Daubié AS, Clermont O, Jauréguy F, Couffignal C, Dahbi G, Mora A, Blanco J, Branger C, Mentré F, Eddi A, Picard B, Denamur E, The Coliville Group n
Phylogenetic, virulence and antibiotic resistance characteristics of commensal strain populations of Escherichia coli from community subjects in the Paris area in 2010 and evolution over 30 years.
Microbiology (Reading, England) 2016, 162, 642-650.

Sabarly V, Aubron C, Glodt J, Balliau T, Langella O, Chevret D, Rigal O, Bourgais A, Picard B, de Vienne D, Denamur E, Bouvet O, Dillmann C
Interactions between genotype and environment drive the metabolic phenotype within Escherichia coli isolates.
Environmental Microbiology 2016, 18, 100-117.

Hauser L, Menasie S, Bonacorsi S, Raoult L, AitOubelli N, Belloy M, Avran D, Beyloune A, Simonet M, Billard-Pomares T, Pangon B, Bierling P
Fatal transfusion-transmitted infection due to Citrobacter koseri.
Transfusion 2016, 56, 1311-1313.

Jayol A, Nordmann P, Desroches M, Decousser JW, Poirel L
Acquisition of Broad-Spectrum Cephalosporin Resistance Leading to Colistin Resistance in Klebsiella pneumoniae.
Antimicrobial Agents and Chemotherapy 2016, 60, 3199-3201.

Mourand G, Touzain F, Jouy E, Fleury MA, Denamur E, Kempf I
Rare spontaneous loss of multi-resistance gene carrying IncI/ST12 plasmid in Escherichia coli in pig microbiota.
Antimicrobial Agents and Chemotherapy 2016

de Lastours V, Chopin D, Jacquier H, d'Humières C, Burdet C, Chau F, Denamur E, Fantin B
Prospective Cohort Study of the Relative Abundance of Extended-Spectrum-Beta-Lactamase-Producing Escherichia coli in the Gut of Patients Admitted to Hospitals.
Antimicrobial Agents and Chemotherapy 2016, 60, 6941-6944.

de Curraize C, Kumanski S, Micaëlo M, Fournet N, La Ruche G, Meunier F, Amarsy R, Jacquier H, Cambau E, Goubard A, Bercot B
Ceftriaxone-Resistant Neisseria gonorrhoeae Isolates (2010 to 2014) in France Characterized by Using Whole-Genome Sequencing.
Antimicrobial Agents and Chemotherapy 2016, 60, 6962-6964.

Bidet P, Basmaci R, Guglielmini J, Doit C, Jost C, Birgy A, Bonacorsi S
Genome Analysis of Kingella kingae Strain KWG1 Reveals How a β-Lactamase Gene Inserted in the Chromosome of This Species.
Antimicrobial Agents and Chemotherapy 2016, 60, 703-708.

Mercat M, Clermont O, Massot M, Ruppe E, de Garine-Wichatitsky M, Miguel E, Valls Fox H, Cornelis D, Andremont A, Denamur E, Caron A
Escherichia coli Population Structure and Antibiotic Resistance at a Buffalo/Cattle Interface in Southern Africa.
Applied and Environmental Microbiology 2016, 82, 1459-1467.

Tourret J, Denamur E
Population Phylogenomics of Extraintestinal Pathogenic Escherichia coli.
Microbiology Spectrum 2016

Bellulo S, Sommet J, Lévy C, Gillet Y, Hees L, Lorrot M, Gras-Le-Guen C, Craiu I, Dubos F, Minodier P, Biscardi S, Dommergues MA, Béchet S, Bidet P, Alberti C, Cohen R, Faye A, FPIDSG(
When should clinicians suspect group A streptococcus empyema in children? A multicentre case-control study in French tertiary care centres.
Archives of Disease in Childhood 2016

Birgand G, Leroy C, Nerome S, Luong Nguyen LB, Lolom I, Armand-Lefevre L, Ciotti C, Lecorre B, Marcade G, Fihman V, Nicolas-Chanoine MH, Pelat C, Perozziello A, Fantin B, Yazdanpanah Y, Ricard JD, Lucet JC
Costs associated with implementation of a strict policy for controlling spread of highly resistant microorganisms in France.
BMJ open 2016, 6, e009029.

Ichou L, Carbonell N, Rautou PE, Laurans L, Bourcier S, Pichereau C, Baudel JL, Nousbaum JB, Renou C, Anty R, Tankovic J, Maury E, Guidet B, Landraud L, Ait-Oufella H
Ascitic fluid TREM-1 for the diagnosis of spontaneous bacterial peritonitis.
Gut 2016, 65, 536-538.

Raharolahy O, Ramarozatovo LS, Ranaivo IM, Sendrasoa FA, Andrianarison M, Andrianarivelo MR, Cambau E, Rabenja FR
A Case of Fluoroquinolone-Resistant Leprosy Discovered after 9 Years of Misdiagnosis.
Case Reports in Infectious Diseases 2016, 2016, 4632369.

La Combe B, Messika J, Fartoukh M, Ricard JD
Increased use of high-flow nasal oxygen during bronchoscopy.
The European Respiratory Journal 2016, 48, 590-592.

Sartelli M, Weber DG, Ruppé E, Bassetti M, Wright BJ, Ansaloni L, Catena F, Coccolini F, Abu-Zidan FM, Coimbra R, Moore EE, Moore FA, Maier RV, De Waele JJ, Kirkpatrick AW, Griffiths EA, Eckmann C, Brink AJ, Mazuski JE, May AK, Sawyer RG, Mertz D, Montravers P, Kumar A, Roberts JA, Vincent JL, Watkins RR, Lowman W, Spellberg B, Abbott IJ, Adesunkanmi AK, Al-Dahir S, Al-Hasan MN, Agresta F, Althani AA, Ansari S, Ansumana R, Augustin G, Bala M, Balogh ZJ, Baraket O, Bhangu A, Beltrán MA, Bernhard M, Biffl WL, Boermeester MA, Brecher SM, Cherry-Bukowiec JR, Buyne OR, Cainzos MA, Cairns KA, Camacho-Ortiz A, Chandy SJ, Che Jusoh A, Chichom-Mefire A, Colijn C, Corcione F, Cui Y, Curcio D, Delibegovic S, Demetrashvili Z, De Simone B, Dhingra S, Diaz JJ, Di Carlo I, Dillip A, Di Saverio S, Doyle MP, Dorj G, Dogjani A, Dupont H, Eachempati SR, Enani MA, Egiev VN, Elmangory MM, Ferrada P, Fitchett JR, Fraga GP, Guessennd N, Giamarellou H, Ghnnam W, Gkiokas G, Goldberg SR, Gomes CA, Gomi H, Guzmán-Blanco M, Haque M, Hansen S, Hecker A, Heizmann WR, Herzog T, Hodonou AM, Hong SK, Kafka-Ritsch R, Kaplan LJ, Kapoor G, Karamarkovic A, Kees MG, Kenig J, Kiguba R, Kim PK, Kluger Y, Khokha V, Koike K, Kok KYY, Kong V, Knox MC, Inaba K, Isik A, Iskandar K, Ivatury RR, Labbate M, Labricciosa FM, Laterre PF, Latifi R, Lee JG, Lee YR, Leone M, Leppaniemi A, Li Y, Liang SY, Loho T, Maegele M, Malama S, Marei HE, Martin-Loeches I, Marwah S, Massele A, McFarlane M, Melo RB, Negoi I, Nicolau DP, Nord CE, Ofori-Asenso R, Omari AH, Ordonez CA, Ouadii M, Pereira Júnior GA, Piazza D, Pupelis G, Rawson TM, Rems M, Rizoli S, Rocha C, Sakakhushev B, Sanchez-Garcia M, Sato N, Segovia Lohse HA, Sganga G, Siribumrungwong B, Shelat VG, Soreide K, Soto R, Talving P, Tilsed JV, Timsit JF, Trueba G, Trung NT, Ulrych J, van Goor H, Vereczkei A, Vohra RS, Wani I, Uhl W, Xiao Y, Yuan KC, Zachariah SK, Zahar JR, Zakrison TL, Corcione A, Melotti RM, Viscoli C, Viale P
Antimicrobials: a global alliance for optimizing their rational use in intra-abdominal infections (AGORA).
World journal of emergency surgery: WJES 2016, 11,

Montravers P, Augustin P, Grall N, Desmard M, Allou N, Marmuse JP, Guglielminotti J
Characteristics and outcomes of anti-infective de-escalation during health care-associated intra-abdominal infections.
Critical Care (London, England) 2016, 20, 83.

Contou D, Roux D, Jochmans S, Coudroy R, Guérot E, Grimaldi D, Ricome S, Maury E, Plantefève G, Mayaux J, Mekontso Dessap A, Brun-Buisson C, de Prost N
Septic shock with no diagnosis at 24 hours: a pragmatic multicenter prospective cohort study.
Critical Care (London, England) 2016, 20, 360.

Messika J, Hajage D, Panneckoucke N, Villard S, Martin Y, Renard E, Blivet A, Reignier J, Maquigneau N, Stoclin A, Puechberty C, Guétin S, Dechanet A, Fauquembergue A, Gaudry S, Dreyfuss D, Ricard JD
Effect of a musical intervention on tolerance and efficacy of non-invasive ventilation in the ICU: study protocol for a randomized controlled trial (MUSique pour l'Insuffisance Respiratoire Aigue - Mus-IRA).
Trials 2016, 17, 450.

Labbé V, Ederhy S, Pasquet B, Miguel-Montanes R, Rafat C, Hajage D, Gaudry S, Dreyfuss D, Cohen A, Fartoukh M, Ricard JD
Can we improve transthoracic echocardiography training in non-cardiologist residents? Experience of two training programs in the intensive care unit.
Annals of Intensive Care 2016, 6, 44.

Boumendil A, Woimant M, Quenot JP, Rooryck FX, Makhlouf F, Yordanov Y, Delerme S, Takun K, Ray P, Kouka MC, Poly C, Garrouste-Orgeas M, Thomas C, Simon T, Azerad S, Leblanc G, Pateron D, Guidet B, IC2sn
Designing and conducting a cluster-randomized trial of ICU admission for the elderly patients: the ICE-CUB 2 study.
Annals of Intensive Care 2016, 6, 74.

Mieras L, Anthony R, van Brakel W, Bratschi MW, van den Broek J, Cambau E, Cavaliero A, Kasang C, Perera G, Reichman L, Richardus JH, Saunderson P, Steinmann P, Yew WW
Negligible risk of inducing resistance in Mycobacterium tuberculosis with single-dose rifampicin as post-exposure prophylaxis for leprosy.
Infectious Diseases of Poverty 2016, 5, 46.

Morel V, Joly D, Villatte C, Dubray C, Durando X, Daulhac L, Coudert C, Roux D, Pereira B, Pickering G
Memantine before Mastectomy Prevents Post-Surgery Pain: A Randomized, Blinded Clinical Trial in Surgical Patients.
PloS One 2016, 11, e0152741.

Nikolayevskyy V, Hillemann D, Richter E, Ahmed N, van der Werf MJ, Kodmon C, Drobniewski F, Ruesch-Gerdes S, ENN
External Quality Assessment for Tuberculosis Diagnosis and Drug Resistance in the European Union: A Five Year Multicentre Implementation Study.
PloS One 2016, 11, e0152926.

Tourret J, Willing BP, Croxen MA, Dufour N, Dion S, Wachtel S, Denamur E, Finlay BB
Small Intestine Early Innate Immunity Response during Intestinal Colonization by Escherichia coli Depends on Its Extra-Intestinal Virulence Status.
PloS One 2016, 11, e0153034.

Melloul E, Luiggi S, Anaïs L, Arné P, Costa JM, Fihman V, Briard B, Dannaoui E, Guillot J, Decousser JW, Beauvais A, Botterel F
Characteristics of Aspergillus fumigatus in Association with Stenotrophomonas maltophilia in an In Vitro Model of Mixed Biofilm.
PloS One 2016, 11, e0166325.

Houamel D, Ducrot N, Lefebvre T, Daher R, Moulouel B, Sari MA, Letteron P, Lyoumi S, Millot S, Tourret J, Bouvet O, Vaulont S, Vandewalle A, Denamur E, Puy H, Beaumont C, Gouya L, Karim Z
Hepcidin as a Major Component of Renal Antibacterial Defenses against Uropathogenic Escherichia coli.
Journal of the American Society of Nephrology: JASN 2016, 27, 835-846.

Galy A, Lepeule R, Goulenok T, Buzele R, de Lastours V, Fantin B
Presentation and impact of catheter-associated thrombosis in patients with infected long-term central venous catheters: a prospective bicentric observational study.
Annals of Medicine 2016, 48, 182-189.

Soysal N, Mariani-Kurkdjian P, Smail Y, Liguori S, Gouali M, Loukiadis E, Fach P, Bruyand M, Blanco J, Bidet P, Bonacorsi S
Enterohemorrhagic Escherichia coli Hybrid Pathotype O80:H2 as a New Therapeutic Challenge.
Emerging Infectious Diseases 2016, 22, 1604-1612.

Dufour N, Henry M, Ricard JD, Debarbieux L
Commentary: Morphologically Distinct Escherichia coli Bacteriophages Differ in Their Efficacy and Ability to Stimulate Cytokine Release In Vitro.
Frontiers in Microbiology 2016, 7, 1029.

Djuikoue IC, Woerther PL, Toukam M, Burdet C, Ruppé E, Gonsu KH, Fokunang C, El Mniai A, Larissa K, Pieme AC, Mboupaing MG, Kakam CM, Fogang HK, Andremont A, Ngogang J
Intestinal carriage of Extended Spectrum Beta-Lactamase producing E. coli in women with urinary tract infections, Cameroon.
Journal of Infection in Developing Countries 2016, 10, 1135-1139.

Messika J, Stoclin A, Bouvard E, Fulgencio JP, Ridel C, Muresan IP, Boffa JJ, Bachmeyer C, Denis M, Gounant V, Esteso A, Loi V, Verdet C, Prigent H, Parrot A, Fartoukh M
The Challenging Diagnosis of Non-Community-Acquired Pneumonia in Non-Mechanically Ventilated Subjects: Value of Microbiological Investigation.
Respiratory Care 2016, 61, 225-234.

Andre E, Isaacs C, Affolabi D, Alagna R, Brockmann D, de Jong BC, Cambau E, Churchyard G, Cohen T, Delmee M, Delvenne JC, Farhat M, Habib A, Holme P, Keshavjee S, Khan A, Lightfoot P, Moore D, Moreno Y, Mundade Y, Pai M, Patel S, Nyaruhirira AU, Rocha LEC, Takle J, Trébucq A, Creswell J, Boehme C
Connectivity of diagnostic technologies: improving surveillance and accelerating tuberculosis elimination.
The International Journal of Tuberculosis and Lung Disease: The Official Journal of the International Union Against Tuberculosis and Lung Disease 2016, 20, 999-1003.

Hugonnet JE, Mengin-Lecreulx D, Monton A, den Blaauwen T, Carbonnelle E, Veckerlé C, Brun YV, van Nieuwenhze M, Bouchier C, Tu K, Rice LB, Arthur M
Factors essential for L,D-transpeptidase-mediated peptidoglycan cross-linking and β-lactam resistance in Escherichia coli.
eLife 2016

Suzan-Monti M, Lorente N, Demoulin B, Marcellin F, Préau M, Dray-Spira R, Lert F, Spire B, AVSG
Sexual risk behaviour among people living with HIV according to the biomedical risk of transmission: results from the ANRS-VESPA2 survey.
Journal of the International AIDS Society 2016, 19, 20095.

Ricard JD
Hazards of intubation in the ICU: role of nasal high flow oxygen therapy for preoxygenation and apneic oxygenation to prevent desaturation.
Minerva Anestesiologica 2016, 82, 1098-1106.

Aloy B, Tazi I, Bagnis CI, Gauthier M, Janus N, Launay-Vacher V, De Scheerder MA, Tourret J
Tenofovir: Is Tenofovir Alafenamide Safer than Tenofovir Disoproxil Fumarate for the Kidneys?.
AIDS reviews 2016, 18,

Sangare SA, Maiga AI, Guindo I, Maiga A, Camara N, Dicko OA, Diallo S, Bougoudogo F, Armand-Lefevre L, Andremont A, Maiga II
Prevalence of ESBL-producing Enterobacteriaceae isolated from blood cultures in Mali.
Journal of Infection in Developing Countries 2016, 10, 1059-1064.

Djuikoue IC, Woerther PL, Toukam M, Burdet C, Ruppé E, Gonsu KH, Fokunang C, El Mniai A, Larissa K, Pieme AC, Mboupaing MG, Kakam CM, Fogang HK, Andremont A, Ngogang J
Intestinal carriage of Extended Spectrum Beta-Lactamase producing E. coli in women with urinary tract infections, Cameroon.
Journal of Infection in Developing Countries 2016, 10, 1135-1139.

 2015                                                                            

Silverman HJ, Dreyfuss D
Were There "Additional Foreseeable Risks" in the SUPPORT Study? Lessons Not Learned from the ARDSnet Clinical Trials.
The Hastings Center Report 2015, 45, 21-29.

Silverman HJ, Dreyfuss D
What counts as equipoise?.
The Hastings Center Report 2015, 45, 3-4.

Smati M, Clermont O, Bleibtreu A, Fourreau F, David A, Daubié AS, Hignard C, Loison O, Picard B, Denamur E
Quantitative analysis of commensal Escherichia coli populations reveals host-specific enterotypes at the intra-species level.
MicrobiologyOpen 2015, 4, 604-615.

Zwaans W, Verhagen T, Roumen R, Scheltinga M, Dieleman J, Vad M, Frost P, Rosenberg J, Svendsen SW, Tabbara M, Carandina S, Bossi M, Polliand C, Barrat C, Soler M, Chander J, Sharma R, Lal R, Pradhan G, Mol F, Mitura K, Romanczuk M, Lundstrom K, Nordin P, Holmberg H, Sahin A, Kulacoglu H, Olcucuoglu E, Guadalaxara A, Rampinelli LA, Mariani P, Ubezio D, Felici A, Santagati G, Novellino L, Gitelis M, DeAsis F, Chao S, Lapin B, Denham W, Linn J, Haggerty S, Carbray J, Ujiki M, Evans L, Canciani GN, Gordon EM, Wei P, Tam K, Chen C, Kao C, Protasov A, Bogdanov D, Meshkov M, Kurganov I, Misra MC, Bansal VK, Subodh K, Krishna A, Bansal D, Ray S, Rajeshwari S, Marzo F, Forni S, Massi M, Gia L, Dabrowski A
Topic: Inguinal Hernia - Post op chronic pain: incidence, evaluation, legal consequences, therapy, follow up.
Hernia: The Journal of Hernias and Abdominal Wall Surgery 2015, 19 Suppl 1, S267-274.

Cambau E, Bauer M
Multi-pathogen real-time PCR system adds benefit for my patients: yes.
Intensive Care Medicine 2015, 41, 528-530.

Ricard JD, Messika J, Sztrymf B, Gaudry S
Impact on outcome of delayed intubation with high-flow nasal cannula oxygen: is the device solely responsible?.
Intensive Care Medicine 2015

Bretonnière C, Leone M, Milési C, Allaouchiche B, Armand-Lefevre L, Baldesi O, Bouadma L, Decré D, Figueiredo S, Gauzit R, Guery B, Joram N, Jung B, Lasocki S, Lepape A, Lesage F, Pajot O, Philippart F, Souweine B, Tattevin P, Timsit JF, Vialet R, Zahar JR, Misset B, Bedos JP
Strategies to reduce curative antibiotic therapy in intensive care units (adult and paediatric).
Intensive Care Medicine 2015, 41, 1181-1196.

de Prost N, Sbidian E, Chosidow O, Brun-Buisson C, Amathieu R, HMHNFG
Management of necrotizing soft tissue infections in the intensive care unit: results of an international survey.
Intensive Care Medicine 2015, 41, 1506-1508.

Dreyfuss D, Ricard JD, Gaudry S
Did studies on HFOV fail to improve ARDS survival because they did not decrease VILI? On the potential validity of a physiological concept enounced several decades ago.
Intensive Care Medicine 2015, 41, 2076-2086.

Burdet C, Pajot O, Couffignal C, Armand-Lefèvre L, Foucrier A, Laouénan C, Wolff M, Massias L, Mentré F
Population pharmacokinetics of single-dose amikacin in critically ill patients with suspected ventilator-associated pneumonia.
European Journal of Clinical Pharmacology 2015, 71, 75-83.

Amarsy-Guerle R, Mougari F, Jacquier H, Oliary J, Benmansour H, Riahi J, Berçot B, Raskine L, Cambau E
High medical impact of implementing the new polymeric bead-based BacT/ALERT® FAPlus and FNPlus blood culture bottles in standard care.
European Journal of Clinical Microbiology & Infectious Diseases: Official Publication of the European Society of Clinical Microbiology 2015, 34, 1031-1037.

Jacquier H, Benmansour H, Zadegan F, Hannouche D, Micaelo M, Mongiat-Artus P, Salomon E, Cambau E, Berçot B
Actinobaculum schaalii, a new cause of knee prosthetic joint infection in elderly.
Infection 2015

Carosella ED, Rouas-Freiss N, Roux DTL, Moreau P, LeMaoult J
HLA-G: An Immune Checkpoint Molecule.
Advances in Immunology 2015, 127, 33-144.

Dupont H, Marciniak S, Zogheib E, Mammeri H, Friggeri A, Ammenouche N, Levrard M, Airapetian N, Tinturier F, Mahjoub Y
Use of aztreonam in association with cefepime for the treatment of nosocomial infections due to multidrug-resistant strains of Pseudomonas aeruginosa to β-lactams in ICU patients: A pilot study.
Anaesthesia, Critical Care & Pain Medicine 2015, 34, 141-144.

Jaubert J, Mougari F, Picot S, Boukerrou M, Barau G, Ali Ahmed SA, Raskine L, Camuset G, Michault A, Simac C, Cambau E
A case of postoperative breast infection by Mycobacterium fortuitum associated with the hospital water supply.
American Journal of Infection Control 2015, 43, 406-408.

Parienti JJ, Lucet JC, Lefort A, Armand-Lefèvre L, Wolff M, Caron F, Cattoir V, Yazdanpanah Y
Empirical therapies among adults hospitalized for community-acquired upper urinary tract infections: A decision-tree analysis of mortality, costs, and resistance.
American Journal of Infection Control 2015, 43, e53-e59.

Tarbé de Saint Hardouin AL, Mariani P, Esteve V, Msélati JC, Lorrot M, Blachier A, Aujard Y, Bonacorsi S, Faye A
[Dermo-hypodermitis caused by group B Streptococcus in infants under 3 months of age: A retrospective study in two hospitals].
Archives De Pédiatrie: Organe Officiel De La Sociéte Française De Pédiatrie 2015, 22, 693-698.

Decousser JW, Poirel L, Desroches M, Jayol A, Denamur E, Nordmann P
Failure to detect carbapenem-resistant Escherichia coli producing OXA-48-like using the Xpert Carba-R assay®.
Clinical Microbiology and Infection: The Official Publication of the European Society of Clinical Microbiology and Infectious Diseases 2015, 21, e9-10.

Le Dorze M, Gault N, Foucrier A, Ruppé E, Mourvillier B, Woerther PL, Birgand G, Montravers P, Dilly MP, Tubach F, Andremont A, Timsit JF, Wolff M, Armand-Lefèvre L
Performance and impact of a rapid method combining mass spectrometry and direct antimicrobial susceptibility testing on treatment adequacy of patients with ventilator-associated pneumonia.
Clinical Microbiology and Infection: The Official Publication of the European Society of Clinical Microbiology and Infectious Diseases 2015, 21, 468.e1-6.

Buzelé R, Zarrouk V, Francoz C, Durand F, Fantin B
Characteristics of vertebral osteomyelitis after liver transplantation.
Clinical Microbiology and Infection: The Official Publication of the European Society of Clinical Microbiology and Infectious Diseases 2015

Lemaignen A, Birgand G, Ghodhbane W, Alkhoder S, Lolom I, Belorgey S, Lescure FX, Armand-Lefevre L, Raffoul R, Dilly MP, Nataf P, Lucet JC
Sternal wound infection after cardiac surgery: incidence and risk factors according to clinical presentation.
Clinical Microbiology and Infection: The Official Publication of the European Society of Clinical Microbiology and Infectious Diseases 2015, 21, 674.e11-18.

Joubrel C, Tazi A, Six A, Dmytruk N, Touak G, Bidet P, Raymond J, Trieu Cuot P, Fouet A, Kernéis S, Poyart C
Group B streptococcus neonatal invasive infections, France 2007-2012.
Clinical Microbiology and Infection: The Official Publication of the European Society of Clinical Microbiology and Infectious Diseases 2015, 21, 910-916.

Charfi K, Mansour W, Khalifa ABH, Mastouri M, Aouni M, Mammeri H
Emergence of OXA-204 β-lactamase in Tunisia.
Diagnostic Microbiology and Infectious Disease 2015, 82, 314-317.

Leprince C, Desroches M, Emirian A, Coutureau C, Anais L, Fihman V, Soussy CJ, Decousser JW, Psg
Distribution and antimicrobial susceptibility of bacteria from adults with community-acquired pneumonia or complicated skin and soft tissue infections in France: the nationwide French PREMIUM study.
Diagnostic Microbiology and Infectious Disease 2015

Walewski V, Podglajen I, Lefeuvre P, Dutasta F, Neuschwander A, Tilouche L, Carbonnelle E, Ferroni A
Early detection with the β-LACTA™ test of extended-spectrum β-lactamase-producing Enterobacteriaceae in blood cultures.
Diagnostic Microbiology and Infectious Disease 2015, 83, 216-218.

Ferron G, Simon L, Guyon F, Glehen O, Goere D, Elias D, Pocard M, Gladieff L, Bereder JM, Brigand C, Classe JM, Guilloit JM, Quenet F, Abboud K, Arvieux C, Bibeau F, De Chaisemartin C, Delroeux D, Durand-Fontanier S, Goasguen N, Gouthi L, Heyd B, Kianmanesh R, Leblanc E, Loi V, Lorimier G, Marchal F, Mariani P, Mariette C, Meeus P, Msika S, Ortega-Deballon P, Paineau J, Pezet D, Piessen G, Pirro N, Pomel C, Porcheron J, Pourcher G, Rat P, Regimbeau JM, Sabbagh C, Thibaudeau E, Torrent JJ, Tougeron D, Tuech JJ, Zinzindohoue F, Lundberg P, Herin F, Villeneuve L, BRWG
Professional risks when carrying out cytoreductive surgery for peritoneal malignancy with hyperthermic intraperitoneal chemotherapy (HIPEC): A French multicentric survey.
European Journal of Surgical Oncology: The Journal of the European Society of Surgical Oncology and the British Association of Surgical Oncology 2015, 41, 1361-1367.

Fihman V, Messika J, Hajage D, Tournier V, Gaudry S, Magdoud F, Barnaud G, Billard-Pomares T, Branger C, Dreyfuss D, Ricard JD
Five-year trends for ventilator-associated pneumonia: Correlation between microbiological findings and antimicrobial drug consumption.
International Journal of Antimicrobial Agents 2015, 46, 518-525.

Decousser JW, Desroches M, Bourgeois-Nicolaos N, Potier J, Jehl F, Lina G, Cattoir V, Vandenesh F, Doucet-Populaire F, MSG
Susceptibility trends including emergence of linezolid resistance among coagulase-negative staphylococci and meticillin-resistant Staphylococcus aureus from invasive infections.
International Journal of Antimicrobial Agents 2015, 46, 622-630.

Munier AL, de Lastours V, Barbier F, Chau F, Fantin B, Ruimy R
Comparative dynamics of the emergence of fluoroquinolone resistance in staphylococci from the nasal microbiota of patients treated with fluoroquinolones according to their environment.
International Journal of Antimicrobial Agents 2015

Hua C, Sbidian E, Hemery F, Decousser JW, Bosc R, Amathieu R, Rahmouni A, Wolkenstein P, Valeyrie-Allanore L, Brun-Buisson C, de Prost N, Chosidow O
Prognostic factors in necrotizing soft-tissue infections (NSTI): A cohort study.
Journal of the American Academy of Dermatology 2015, 73, 1006-1012.e8.

Lepainteur M, Nérome S, Bendjelloul G, Monteil C, Cottard-Boulle B, Nion-Huang M, Jarlier V, Fournier S, NoICToAP–HdP
Evaluation of excreta management in a large French multi-hospital institution.
The Journal of Hospital Infection 2015, 91, 346-350.

Poirier C, Dinh A, Salomon J, Grall N, Andremont A, Bernard L
Antibiotic cycling prevents urinary tract infections in spinal cord injury patients and limits the emergence of multidrug resistant organism.
The Journal of Infection 2015

Bataille J, Prot-Labarthe S, Melki I, de Lauzanne A, Doit C, Lorrot M
[Complications of BCG vaccine SSI(®) in a pediatric hospital: Two reported cases].
Presse Médicale (Paris, France: 1983) 2015, 44, 462-465.

Jolly D, Ambrosi P, Chaffanjon P, Dreyfuss D, Le Jeunne C, Lorette G, Obert L, Palombi O, Romanet JP
[Results of the 2014 National Ranking in France.].
Presse Medicale (Paris, France: 1983) 2015

Bonnal C, Birgand G, Lolom I, Diamantis S, Dumortier C, L'Heriteau F, Armand-Lefevre L, Lucet JC
Staphylococcus aureus healthcare associated bacteraemia: An indicator of catheter related infections.
Medecine Et Maladies Infectieuses 2015, 45, 84-88.

Lefébure A, Papy E, Rioux C, Diamantis S, Armand-Lefèvre L, Longuet P, Lescure FX, Wolff M, Arnaud P, Lucet JC
Audit of carbapenem prescriptions comparing 2 assessment periods.
Medecine Et Maladies Infectieuses 2015, 45, 273-278.

Sangare SA, Maiga AI, Guindo I, Maiga A, Camara N, Savadogo S, Diallo S, Bougoudogo F, Armand-Lefevre L, Andremont A, Maiga II
Prevalence of extended-spectrum beta-lactamase-producing Enterobacteriaceae isolated from blood cultures in Africa.
Médecine Et Maladies Infectieuses 2015, 45, 374-382.

Reibel F, Cambau E, Aubry A
Update on the epidemiology, diagnosis, and treatment of leprosy.
Médecine Et Maladies Infectieuses 2015, 45, 383-393.

Jost C, Breton B, Biran V, Khung S, Chekroune S, Bonacorsi S
First case of pregnant women bacteraemia and probable early-onset neonatal infection due to Aerococcus urinae.
New Microbes and New Infections 2015, 3, 1-3.

Gallois C, Hauw-Berlemont C, Richaud C, Bonacorsi S, Diehl JL, Mainardi JL
Fatal necrotizing fasciitis due to necrotic toxin-producing Escherichia coli strain.
New Microbes and New Infections 2015, 8, 109-112.

Hutin A, Lidouren F, Kohlhauer M, Lotteau L, Seemann A, Mongardon N, Renaud B, Isabey D, Carli P, Vivien B, Ricard JD, Hauet T, Kerber RE, Berdeaux A, Ghaleh B, Tissier R
Total liquid ventilation offers ultra-fast and whole-body cooling in large animals in physiological conditions and during cardiac arrest.
Resuscitation 2015, 93, 69-73.

Monnier D, Goulenok T, Allary J, Zarrouk V, Fantin B
[Starvation ketosis in a breastfeeding woman].
La Revue De Medecine Interne / Fondee ... Par La Societe Nationale Francaise De Medecine Interne 2015

Ficko C, Bechara C, Gerin M, Carbonnelle E, Podglajen I, Mainardi JL
[Bloodstream infection due to Campylobacter fetus subspecies fetus and skin involvement: A case series of three patients].
La Revue De Medecine Interne / Fondee ... Par La Societe Nationale Francaise De Medecine Interne 2015

Lepoutre A, Varon E, Georges S, Dorléans F, Janoir C, Gutmann L, Lévy-Bruhl D, MoE, ON
Impact of the pneumococcal conjugate vaccines on invasive pneumococcal disease in France, 2001-2012.
Vaccine 2015, 33, 359-366.

Mullaert J, Abgrall S, Lele N, Batteux F, Slama LB, Meritet JF, Lebon P, Bouchaud O, Grabar S, Launay O, AVSG
Diphtheria, tetanus, poliomyelitis, yellow fever and hepatitis B seroprevalence among HIV1-infected migrants. Results from the ANRS VIHVO vaccine sub-study.
Vaccine 2015, 33, 4938-4944.

Cohen R, Varon E, Doit C, Schlemmer C, Romain O, Thollot F, Béchet S, Bonacorsi S, Levy C
A 13-year survey of pneumococcal nasopharyngeal carriage in children with acute otitis media following PCV7 and PCV13 implementation.
Vaccine 2015

Varon E, Cohen R, Béchet S, Doit C, Levy C
Invasive disease potential of pneumococci before and after the 13-valent pneumococcal conjugate vaccine implementation in children.
Vaccine 2015, 33, 6178-6185.

Bernard L, Dinh A, Ghout I, Simo D, Zeller V, Issartel B, Le Moing V, Belmatoug N, Lesprit P, Bru JP, Therby A, Bouhour D, Dénes E, Debard A, Chirouze C, Fèvre K, Dupon M, Aegerter P, Mulleman D, DoTfS(sg
Antibiotic treatment for 6 weeks versus 12 weeks in patients with pyogenic vertebral osteomyelitis: an open-label, non-inferiority, randomised, controlled trial.
Lancet 2015, 385, 875-882.

Ricard JD, Messika J
Corticosteroid therapy for pneumonia.
Lancet (London, England) 2015, 386, 954.

Raymond J, Bonacorsi S
Quelles méthodes microbiologiques dans un schéma repensé de prise en charge des infections néonatales précoces?.
Archives De Pédiatrie: Organe Officiel De La Sociéte Française De Pédiatrie 2015, 22, 58.

Bonacorsi S
[Antibacterial resistance of community acquired infections: warnings and good news].
Archives De Pédiatrie: Organe Officiel De La Sociéte Française De Pédiatrie 2015, 22, 69-70.

Martin-Loeches I, Povoa P, Rodríguez A, Curcio D, Suarez D, Mira JP, Cordero ML, Lepecq R, Girault C, Candeias C, Seguin P, Paulino C, Messika J, Castro AG, Valles J, Coelho L, Rabello L, Lisboa T, Collins D, Torres A, Salluh J, Nseir S, Ts
Incidence and prognosis of ventilator-associated tracheobronchitis (TAVeM): a multicentre, prospective, observational study.
The Lancet. Respiratory Medicine 2015, 3, 859-868.

Parmentier B, Berrebi D, Peycelon M, Doit C, Ghoneimi AE, Bonnard A
Failure of First-Line Antibiotics in Nonoperative Management of Appendiceal Mass, toward a Second-Line Instead of Surgery?.
European Journal of Pediatric Surgery: Official Journal of Austrian Association of Pediatric Surgery ... [et Al] = Zeitschrift Fur Kinderchirurgie 2015

Frat JP, Thille AW, Mercat A, Girault C, Ragot S, Perbet S, Prat G, Boulain T, Morawiec E, Cottereau A, Devaquet J, Nseir S, Razazi K, Mira JP, Argaud L, Chakarian JC, Ricard JD, Wittebole X, Chevalier S, Herbland A, Fartoukh M, Constantin JM, Tonnelier JM, Pierrot M, Mathonnet A, Béduneau G, Delétage-Métreau C, Richard JCM, Brochard L, Robert R, FSG, RN
High-flow oxygen through nasal cannula in acute hypoxemic respiratory failure.
The New England Journal of Medicine 2015, 372, 2185-2196.

Roux D, Cywes-Bentley C, Zhang YF, Pons S, Konkol M, Kearns DB, Little DJ, Howell PL, Skurnik D, Pier GB
Identification of Poly-N-acetylglucosamine as a Major Polysaccharide Component of the Bacillus subtilis Biofilm Matrix.
The Journal of Biological Chemistry 2015, 290, 19261-19272.

Cohen R, Levy C, Bonacorsi S, Wollner A, Koskas M, Jung C, Béchet S, Chalumeau M, Cohen J, Bidet P
Diagnostic accuracy of clinical symptoms and rapid diagnostic test in group a streptococcal perianal infections in children.
Clinical Infectious Diseases: An Official Publication of the Infectious Diseases Society of America 2015, 60, 267-270.

Sibiude J, Le Chenadec J, Bonnet D, Tubiana R, Faye A, Dollfus C, Mandelbrot L, Delmas S, Lelong N, Khoshnood B, Warszawski J, Blanche S, FNAfRoAaVHFPCIMET
In utero exposure to zidovudine and heart anomalies in the ANRS French perinatal cohort and the nested PRIMEVA randomized trial.
Clinical Infectious Diseases: An Official Publication of the Infectious Diseases Society of America 2015, 61, 270-280.

Ruppé E, Armand-Lefèvre L, Estellat C, Consigny PH, El Mniai A, Boussadia Y, Goujon C, Ralaimazava P, Campa P, Girard PM, Wyplosz B, Vittecoq D, Bouchaud O, Le Loup G, Pialoux G, Perrier M, Wieder I, Moussa N, Esposito-Farèse M, Hoffmann I, Coignard B, Lucet JC, Andremont A, Matheron S
High Rate of Acquisition but Short Duration of Carriage of Multidrug-Resistant Enterobacteriaceae After Travel to the Tropics.
Clinical Infectious Diseases: An Official Publication of the Infectious Diseases Society of America 2015, 61, 593-600.

Basmaci R, Bonacorsi S, Bidet P, Biran V, Aujard Y, Bingen E, Béchet S, Cohen R, Levy C
Escherichia Coli Meningitis Features in 325 Children From 2001 to 2013 in France.
Clinical Infectious Diseases: An Official Publication of the Infectious Diseases Society of America 2015, 61, 779-786.

Mandelbrot L, Tubiana R, Le Chenadec J, Dollfus C, Faye A, Pannier E, Matheron S, Khuong MA, Garrait V, Reliquet V, Devidas A, Berrebi A, Allisy C, Elleau C, Arvieux C, Rouzioux C, Warszawski J, Blanche S, AESG
No perinatal HIV-1 transmission from women with effective antiretroviral therapy starting before conception.
Clinical Infectious Diseases: An Official Publication of the Infectious Diseases Society of America 2015, 61, 1715-1725.

Frère J, Bidet P, Tapiéro B, Rallu F, Minodier P, Bonacorsi S, Bingen E, Ovetchkine P
Clinical and Microbiological Characteristics of Invasive Group A Streptococcal Infections Before and After Implementation of a Universal Varicella Vaccine Program.
Clinical Infectious Diseases: An Official Publication of the Infectious Diseases Society of America 2015

Orenstein R, Dubberke E, Hardi R, Ray A, Mullane K, Pardi DS, Ramesh MS, PCI
Safety and Durability of RBX2660 (microbiota suspension) for Recurrent Clostridium difficile Infection: Results of the PUNCH CD Study.
Clinical Infectious Diseases: An Official Publication of the Infectious Diseases Society of America 2015

Cambau E, Viveiros M, Machado D, Raskine L, Ritter C, Tortoli E, Matthys V, Hoffner S, Richter E, Perez Del Molino ML, Cirillo DM, van Soolingen D, Böttger EC
Revisiting susceptibility testing in MDR-TB by a standardized quantitative phenotypic assessment in a European multicentre study.
The Journal of Antimicrobial Chemotherapy 2015, 70, 686-696.

Soubirou JF, Rossi B, Couffignal C, Ruppé E, Chau F, Massias L, Lepeule R, Mentre F, Fantin B
Activity of temocillin in a murine model of urinary tract infection due to Escherichia coli producing or not producing the ESBL CTX-M-15.
The Journal of Antimicrobial Chemotherapy 2015, 70, 1466-1472.

Pajot O, Burdet C, Couffignal C, Massias L, Armand-Lefevre L, Foucrier A, Da Silva D, Lasocki S, Laouénan C, Mentec H, Mentré F, Wolff M
Impact of imipenem and amikacin pharmacokinetic/pharmacodynamic parameters on microbiological outcome of Gram-negative bacilli ventilator-associated pneumonia.
The Journal of Antimicrobial Chemotherapy 2015, 70, 1487-1494.

Rodríguez-Beltrán J, Tourret J, Tenaillon O, López E, Bourdelier E, Costas C, Matic I, Denamur E, Blázquez J
High Recombinant Frequency in Extraintestinal Pathogenic Escherichia coli Strains.
Molecular Biology and Evolution 2015, 32, 1708.

Miguel-Montanes R, Hajage D, Messika J, Bertrand F, Gaudry S, Rafat C, Labbé V, Dufour N, Jean-Baptiste S, Bedet A, Dreyfuss D, Ricard JD
Use of high-flow nasal cannula oxygen therapy to prevent desaturation during tracheal intubation of intensive care patients with mild-to-moderate hypoxemia.
Critical Care Medicine 2015, 43, 574-583.

Dufour N, Debarbieux L, Fromentin M, Ricard JD
Treatment of Highly Virulent Extraintestinal Pathogenic Escherichia coli Pneumonia With Bacteriophages.
Critical Care Medicine 2015, 43, e190-e198.

Margetis D, Roux D, Gaudry S, Messika J, Bouvet O, Branger C, Ponnuswamy P, Oufella HA, Dreyfuss D, Denamur E, Ricard JD
Effects of Proanthocyanidins on Adhesion, Growth, and Virulence of Highly Virulent Extraintestinal Pathogenic Escherichia coli Argue for Its Use to Treat Oropharyngeal Colonization and Prevent Ventilator-Associated Pneumonia.
Critical Care Medicine 2015, 43, e170-e178.

Kohlhauer M, Lidouren F, Remy-Jouet I, Mongardon N, Adam C, Bruneval P, Hocini H, Levy Y, Blengio F, Carli P, Vivien B, Ricard JD, Micheau P, Walti H, Nadeau M, Robert R, Richard V, Mulder P, Maresca D, Demené C, Pernot M, Tanter M, Ghaleh B, Berdeaux A, Tissier R
Hypothermic Total Liquid Ventilation Is Highly Protective Through Cerebral Hemodynamic Preservation and Sepsis-Like Mitigation After Asphyxial Cardiac Arrest.
Critical Care Medicine 2015

Grivea IN, Michoula AN, Basmaci R, Dailiana ZH, Tsimitselis G, Bonacorsi S, Syrogiannopoulos GA
Kingella kingae sequence type-complex 14 arthritis in a 16-month-old child in Greece.
The Pediatric Infectious Disease Journal 2015, 34, 107-108.

d'Humières C, Bidet P, Levy C, Béchet S, Bonacorsi S, Bingen E, Cohen R
Comparative Epidemiology of Streptococcus pyogenes emm-Types Causing Invasive and Noninvasive Infections in French Children by Use of High-Resolution Melting-Polymerase Chain Reaction.
The Pediatric Infectious Disease Journal 2015, 34, 557-561.

Levy C, Bonacorsi S, Béchet S, Poyart C, Cohen R
Late-onset Group B Streptococcal Meningitis, Potential Effectiveness of a Vaccine by Maternal Immunization?.
The Pediatric Infectious Disease Journal 2015, 34, 1039.

Maesani M, Doit C, Lorrot M, Vitoux C, Hilly J, Michelet D, Vidal C, Julien-Marsollier F, Ilharreborde B, Mazda K, Bonacorsi S, Dahmani S
Surgical Site Infections in Pediatric Spine Surgery: Comparative Microbiology of Patients with Idiopathic and Non-Idiopathic Etiologies of Spine Deformity.
The Pediatric Infectious Disease Journal 2015

Prat D, Messika J, Avenel A, Jacobs F, Fichet J, Lemeur M, Ricard JD, Sztrymf B
Constipation incidence and impact in medical critical care patients: importance of the definition criterion.
European Journal of Gastroenterology & Hepatology 2015

Bourgeois-Nicolaos N, Jaureguy F, Pozzi-Gaudin S, Masson C, Guillet-Caruba C, Lavisse F, Larmignat P, Benachi A, Picard B, Doucet-Populaire F
Benefits of Rapid Molecular Diagnosis of Chlamydia Trachomatis and Neisseria Gonorrhoeae Infections in Women Attending Family Planning Clinics.
Sexually Transmitted Diseases 2015, 42, 652-653.

Marcellin F, Demoulin B, Suzan-Monti M, Maradan G, Carrieri MP, Dray-Spira R, Spire B, AVSG
Risk Factors for HCV Reinfection or Transmission in HIV-HCV Coinfected MSM (ANRS-VESPA2 French National Survey).
Journal of Acquired Immune Deficiency Syndromes (1999) 2015, 70, e179-182.

Piessen G, Lefèvre JH, Cabau M, Duhamel A, Behal H, Perniceni T, Mabrut JY, Regimbeau JM, Bonvalot S, Tiberio GAM, Mathonnet M, Regenet N, Guillaud A, Glehen O, Mariani P, Denost Q, Maggiori L, Benhaim L, Manceau G, Mutter D, Bail JP, Meunier B, Porcheron J, Mariette C, Brigand C, AatFwg
Laparoscopic Versus Open Surgery for Gastric Gastrointestinal Stromal Tumors: What Is the Impact on Postoperative Outcome and Oncologic Results?.
Annals of Surgery 2015, 262, 831-840.

Clermont O, Gordon D, Denamur E
A guide to the various phylogenetic classification schemes for Escherichia coli and the correspondence among schemes.
Microbiology (Reading, England) 2015

Grall N, Barraud O, Wieder I, Hua A, Perrier M, Babosan A, Gaschet M, Clermont O, Denamur E, Catzeflis F, Decré D, Ploy MC, Andremont A
Lack of dissemination of acquired resistance to β-lactam in small wild mammals around an isolated village in the Amazonian forest.
Environmental Microbiology Reports 2015

Hogan J, Mahjoub F, Larakeb AS, Vu Thien H, Hosany A, Bensman A, Grimprel E, Bingen E, Bonacorsi S, Ulinski T
Escherichia coli virulence patterns may help to predict vesicoureteral reflux in paediatric urinary tract infections.
Acta Paediatrica (Oslo, Norway: 1992) 2015

Lecefel C, Eloy P, Chauvin B, Wyplosz B, Amilien V, Massias L, Taburet AM, Francois H, Furlan V
Worsening pneumonitis due to a pharmacokinetic drug-drug interaction between everolimus and voriconazole in a renal transplant patient.
Journal of Clinical Pharmacy and Therapeutics 2015, 40, 119-120.

Sellier P, Maylin S, Amarsy R, Mazeron MC, Larrouy L, Haïm-Boukobza S, Lopes A, Moreno MD, Ricbourg A, Simoneau G, Magnier JD, Mercier-Delarue S, Delcey V, Evans J, Cambau E, Barranger E, Simon F, Bergmann JF
Untreated highly viraemic pregnant women from Asia or sub-Saharan Africa often transmit hepatitis B virus despite serovaccination to newborns.
Liver International: Official Journal of the International Association for the Study of the Liver 2015, 35, 409-416.

Welsch C, Augustin P, Allyn J, Massias L, Montravers P, Allou N
Alveolar and serum concentrations of imipenem in two lung transplant recipients supported with extracorporeal membrane oxygenation.
Transplant Infectious Disease: An Official Journal of the Transplantation Society 2015, 17, 103-105.

Tebano G, Geneve C, Tanaka S, Grall N, Atchade E, Augustin P, Thabut G, Castier Y, Montravers P, Desmard M
Epidemiology and risk factors of multidrug-resistant bacteria in respiratory samples after lung transplantation.
Transplant Infectious Disease: An Official Journal of the Transplantation Society 2015

Roux D, Danilchanka O, Guillard T, Cattoir V, Aschard H, Fu Y, Angoulvant Y, Messika J, Ricard J, Mekalanos J, Lory S, Pier G, Skurnik D
Fitness cost of antibiotic susceptibility during bacterial infection.
Science Translational Medecine 2015, 22, 297.

Renvoisé A, Brossier F, Galati E, Veziris N, Sougakoff W, Aubry A, Robert J, Cambau E, Jarlier V, Bernard C
Assessing primary and secondary resistance to clarithromycin and amikacin in infections due to Mycobacterium avium complex.
Antimicrobial Agents and Chemotherapy 2015

Gosalbes MJ, Vázquez-Castellanos JF, Angebault C, Woerther PL, Ruppé E, Ferrús ML, Latorre A, Andremont A, Moya A
Carriage of enterobacteria producing extended spectrum beta-lactamases and composition of the gut microbiota in an Amerindian community.
Antimicrobial Agents and Chemotherapy 2015

Dupont H, Gaillot O, Goetgheluck AS, Plassart C, Emond JP, Lecuru M, Gaillard N, Derdouri S, Lemaire B, Girard de Courtilles M, Cattoir V, Mammeri H
Molecular Characterization of Carbapenem-Non-Susceptible Enterobacterial Isolates Collected during a Prospective Interregional Survey in France and Susceptibility to the Novel Ceftazidime-Avibactam and Aztreonam-Avibactam Combinations.
Antimicrobial Agents and Chemotherapy 2015

Rossi B, Soubirou J, Chau F, Massias L, Dion S, Lepeule R, Fantin B, Lefort A
Cefotaxime and Amoxicillin-Clavulanate Synergism against Extended-Spectrum-β-Lactamase-Producing Escherichia coli in a Murine Model of Urinary Tract Infection.
Antimicrobial Agents and Chemotherapy 2015, 32, 1708.

Basmaci R, Bidet P, Jost C, Yagupsky P, Bonacorsi S
Penicillinase-encoding gene blaTEM-1 may be plasmid borne or chromosomally located in Kingella kingae species.
Antimicrobial Agents and Chemotherapy 2015, 59, 1377-1378.

Delannoy S, Mariani-Kurkdjian P, Bonacorsi S, Liguori S, Ison SA, Fach P
Draft Genome Sequences of Human-Pathogenic Escherichia coli O26:H11 Strains Carrying the stx2 Gene Only and Circulating in France.
Genome Announcements 2015

Delannoy S, Mariani-Kurkdjian P, Bonacorsi S, Liguori S, Fach P
Characteristics of emerging human-pathogenic Escherichia coli O26:H11 strains isolated in France between 2010 and 2013 and carrying the stx2d gene only.
Journal of Clinical Microbiology 2015, 53, 486-492.

Berçot B, Amarsy R, Goubard A, Aparicio C, Loeung HU, Segouin C, Gueret D, Jacquier H, Meunier F, Mougari F, Cambau E
Assessment of coinfection of sexually transmitted pathogen microbes by use of the anyplex II STI-7 molecular kit.
Journal of Clinical Microbiology 2015, 53, 991-993.

Deuzing IP, Charpentier C, Wright DW, Matheron S, Paton J, Frentz D, van de Vijver DA, Coveney PV, Descamps D, ACH2C, Boucher CAB, Beerens N
Mutation V111I in HIV-2 reverse transcriptase increases the fitness of the nucleoside analogue-resistant K65R and Q151M viruses.
Journal of Virology 2015, 89, 833-843.

Aupiais C, Ilharreborde B, Doit C, Blachier A, Desmarest M, Job-Deslandre C, Mazda K, Faye A, Bonacorsi S, Alberti C, Lorrot M
Aetiology of arthritis in hospitalised children: an observational study.
Archives of Disease in Childhood 2015

Nahon P, Lescat M, Layese R, Bourcier V, Talmat N, Allam S, Marcellin P, Guyader D, Pol S, Larrey D, De Lédinghen V, Ouzan D, Zoulim F, Roulot D, Tran A, Bronowicki JP, Zarski JP, Goria O, Calès P, Péron JM, Alric L, Bourlière M, Mathurin P, Blanc JF, Abergel A, Serfaty L, Mallat A, Grangé JD, Attali P, Bacq Y, Wartelle C, Dao T, Benhamou Y, Pilette C, Silvain C, Christidis C, Capron D, Bernard-Chabert B, Hillaire S, Di Martino V, Trinchet JC, Moreau R, Roudot-Thoraval F, ACCaMG
Bacterial infection in compensated viral cirrhosis impairs 5-year survival (ANRS CO12 CirVir prospective cohort).
Gut 2015

Philippart F, Gaudry S, Quinquis L, Lau N, Ouanes I, Touati S, Nguyen JC, Branger C, Faibis F, Mastouri M, Forceville X, Abroug F, Ricard JD, Grabar S, Misset B, TCSG
Randomized intubation with polyurethane or conical cuffs to prevent pneumonia in ventilated patients.
American Journal of Respiratory and Critical Care Medicine 2015, 191, 637-645.

Ricard JD, Messika J
Nonsteroidal anti-inflammatory drugs in community-acquired pneumonia.
The European Respiratory Journal 2015, 46, 876-877.

Ricard JD, Messika J
Low-dose corticosteroids during severe community-acquired pneumonia: end of the story.
The European Respiratory Journal 2015, 45, 305-307.

Angoulvant F, Cohen R, Doit C, Elbez A, Werner A, Béchet S, Bonacorsi S, Varon E, Levy C
Trends in antibiotic resistance of Streptococcus pneumoniae and Haemophilus influenzae isolated from nasopharyngeal flora in children with acute otitis media in France before and after 13 valent pneumococcal conjugate vaccine introduction.
BMC infectious diseases 2015, 15, 236.

Gaillard T, Wurtz N, Houzé S, Sriprawat K, Wangsing C, Hubert V, Lebras J, Nosten F, Briolant S, Pradines B, FNRCfIMSG
Absence of association between Plasmodium falciparum small sub-unit ribosomal RNA gene mutations and in vitro decreased susceptibility to doxycycline.
Malaria Journal 2015, 14, 348.

Gaudry S, Hajage D, Schortgen F, Martin-Lefevre L, Tubach F, Pons B, Boulet E, Boyer A, Lerolle N, Chevrel G, Carpentier D, Lautrette A, Bretagnol A, Mayaux J, Thirion M, Markowicz P, Thomas G, Dellamonica J, Richecoeur J, Darmon M, de Prost N, Yonis H, Megarbane B, Loubières Y, Blayau C, Maizel J, Zuber B, Nseir S, Bigé N, Hoffmann I, Ricard JD, Dreyfuss D
Comparison of two strategies for initiating renal replacement therapy in the intensive care unit: study protocol for a randomized controlled trial (AKIKI).
Trials 2015, 16, 170.

Rafat C, Flamant M, Gaudry S, Vidal-Petiot E, Ricard JD, Dreyfuss D
Hyponatremia in the intensive care unit: How to avoid a Zugzwang situation?.
Annals of Intensive Care 2015, 5, 39.

Fourreau F, Méchaï F, Brossier J, Bouchaud O, Picard B
Vascular graft infection due to Pasteurella multocida.
SpringerPlus 2015, 4, 824.

Reibel F, Chauffour A, Brossier F, Jarlier V, Cambau E, Aubry A
New Insights into the Geographic Distribution of Mycobacterium leprae SNP Genotypes Determined for Isolates from Leprosy Cases Diagnosed in Metropolitan France and French Territories.
PLoS neglected tropical diseases 2015, 9, e0004141.

Dubert M, Pourbaix A, Alkhoder S, Mabileau G, Lescure FX, Ghodhbane W, Belorgey S, Rioux C, Armand-Lefèvre L, Wolff M, Raffoul R, Nataf P, Yazdanpanah Y, Lucet JC
Sternal Wound Infection after Cardiac Surgery: Management and Outcome.
PloS One 2015, 10, e0139122.

Cohen JF, Cohen R, Levy C, Thollot F, Benani M, Bidet P, Chalumeau M
Selective testing strategies for diagnosing group A streptococcal infection in children with pharyngitis: a systematic review and prospective multicentre external validation study.
CMAJ: Canadian Medical Association journal = journal de l'Association medicale canadienne 2015, 187, 23-32.

Basmaci R, Bonacorsi S, Ilharreborde B, Doit C, Lorrot M, Kahil M, Visseaux B, Houhou N, Bidet P
High respiratory virus oropharyngeal carriage rate during Kingella kingae osteoarticular infections in children.
Future Microbiology 2015, 10, 9-14.

de Lastours V, Fantin B
Impact of fluoroquinolones on human microbiota. Focus on the emergence of antibiotic resistance.
Future Microbiology 2015, 10, 1241-1255.

Guglielmetti L, Mougari F, Lopes A, Raskine L, Cambau E
Human infections due to nontuberculous mycobacteria: the infectious diseases and clinical microbiology specialists' point of view.
Future Microbiology 2015

Andremont A, Fiona Fleck n
What to do about resistant bacteria in the food-chain?.
Bulletin of the World Health Organization 2015, 93, 217-218.

Lopes AA, Champion V, Bonacorsi S, Mitanchez D
Livedo Reticularis: A Presenting Sign of Escherichia Coli Sepsis in a Newborn.
Fetal and Pediatric Pathology 2015, 1-5.

Kernéis S, Valade S, Geri G, Compain F, Lavollay M, Rostane H, Carbonnelle E, Mainardi JL
Cefoxitin as a carbapenem-sparing antibiotic for infections caused by extended-spectrum beta-lactamase-producing Escherichia coli and Klebsiella pneumoniae.
Infectious Diseases (London, England) 2015, 47, 793-799.

Smati M, Palacios C, Cohen Y, Méchaï F, Tankovic J, Le Flèche-Mateos A, Picard B, Gonzalez F
Carnobacterium divergens Bacteremia in woman.
Emerging Infectious Diseases 2015, 21, 1081-1082.

Messika J, Ben Ahmed K, Gaudry S, Miguel-Montanes R, Rafat C, Sztrymf B, Dreyfuss D, Ricard JD
Use of High-Flow Nasal Cannula Oxygen Therapy in Subjects With ARDS: A 1-Year Observational Study.
Respiratory Care 2015, 60, 162-169.

Pelletier J, Roux D, Viollet B, Mazure NM, Pouysségur J
AMP-activated protein kinase is dispensable for maintaining ATP levels and for survival following inhibition of glycolysis, but promotes tumour engraftment of Ras-transformed fibroblasts.
Oncotarget 2015, 6, 11833-11847.

Loubet P, Lescure FX, Lepage L, Kirsch M, Armand-Lefevre L, Bouadma L, Lariven S, Duval X, Yazdanpanah Y, Joly V
Endocarditis due to gram-negative bacilli at a French teaching hospital over a 6-year period: clinical characteristics and outcome.
Infectious Diseases (London, England) 2015, 47, 889-895.

La Ruche G, Le Strat Y, Fromage M, Berçot B, Goubard A, de Barbeyrac B, Sednaoui P, Cambau E, Lot F
Incidence of gonococcal and chlamydial infections and coverage of two laboratory surveillance networks, France, 2012.
Euro Surveillance: Bulletin Européen Sur Les Maladies Transmissibles = European Communicable Disease Bulletin 2015, 20, 6-15.

Nogueira E, Lager F, Le Roux D, Nogueira P, Freitas J, Charvet C, Renault G, Loureiro A, Almeida CR, Ohradanova-Repic A, Machacek C, Bernardes GJL, Moreira A, Stockinger H, Burnet M, Carmo AM, Gomes AC, Preto A, Bismuth G, Cavaco-Paulo A
Enhancing Methotrexate Tolerance with Folate Tagged Liposomes in Arthritic Mice.
Journal of Biomedical Nanotechnology 2015, 11, 2243-2252.

 2014                                                                            

Tourret J, Bagnis CI, Denamur E
[Urinary tract infections in diabetic patients].
La Revue Du Praticien 2014, 64, 980-983.

Servy A, Valeyrie-Allanore L, Alla F, Lechiche C, Nazeyrollas P, Chidiac C, Hoen B, Chosidow O, Duval X, APlelPdlISG
Prognostic value of skin manifestations of infective endocarditis.
JAMA dermatology 2014, 150, 494-500.

de Gunzburg J, Ducher A, Modess C, Wegner D, Oswald S, Dressman J, Augustin V, Feger C, Andremont A, Weitschies W, Siegmund W
Targeted adsorption of molecules in the colon with the novel adsorbent-based medicinal product, DAV132: a proof of concept study in healthy subjects.
Journal of Clinical Pharmacology 2014

Burrell RC, Easter JA, Cassidy MP, Gillman KW, Olson RE, Bonacorsi SJ
Synthesis of carbon-14 and stable isotope labeled Avagacestat: a novel gamma secretase inhibitor for the treatment of Alzheimer's disease.
Journal of Labelled Compounds & Radiopharmaceuticals 2014, 57, 600-605.

Cao K, Maxwell BD, Bonacorsi SJ
The synthesis of 14C-labeled N-succinimidyl-3-maleimidopropionate, a linker molecule for PEGylated biologics.
Journal of Labelled Compounds & Radiopharmaceuticals 2014, 57, 667-669.

Mariani-Kurkdjian P, Lemaître C, Bidet P, Perez D, Boggini L, Kwon T, Bonacorsi S
Haemolytic-uraemic syndrome with bacteraemia caused by a new hybrid Escherichia coli pathotype.
New Microbes and New Infections 2014, 2, 127-131.

de Montmollin E, Bouadma L, Gault N, Mourvillier B, Mariotte E, Chemam S, Massias L, Papy E, Tubach F, Wolff M, Sonneville R
Predictors of insufficient amikacin peak concentration in critically ill patients receiving a 25 mg/kg total body weight regimen.
Intensive Care Medicine 2014, 40, 998-1005.

Roux D, Ricard JD
Ask the wrong question, you'll the get the wrong answer.
Intensive Care Medicine 2014, 40, 1611-1612.

Hurmic O, Grall N, Al Nakib M, Poyart C, Grondin S, Ploy MC, Varon E, Raymond J, TOIdFON
Evidence of a clonal expansion of Streptococcus pneumoniae serotype 19A in adults as in children assessed by the DiversiLab® system.
European Journal of Clinical Microbiology & Infectious Diseases: Official Publication of the European Society of Clinical Microbiology 2014

Traore P, Bourgeois-Nicolaos N, Ruimy R, Laurent F, Labrune P, Doucet-Populaire F, Decousser JW
First autochthonous familial cluster of invasive community-acquired leukocidin-positive methicillin-resistant USA300 Staphylococcus aureus in France.
Folia Microbiologica 2014

Carbonnelle E, Josserand V, Riou LM, Ormezzano O, Broisat A, Perret P, Barone-Rochette G, Fagret D, Ghezzi C
Preclinical characterization of a novel radiolabeled analog of practolol for the molecular imaging of myocardial β-adrenoceptor density.
Journal of Nuclear Cardiology: Official Publication of the American Society of Nuclear Cardiology 2014, 21, 984-992.

de Prost N, Bosc R, Brun-Buisson C, Chosidow O, Decousser JW, Dhonneur G, Lepeule R, Rahmouni A, Sbidian E, Amathieu R, GfndlHM
[Necrotizing fasciitis: results of a survey on management practices in French-speaking intensive care units].
Annales Françaises D'anesthèsie Et De Rèanimation 2014, 33, 638-642.

Houdouin V, Pouessel G, Angoulvant F, Brouard J, Derelle J, Fayon M, Ferroni A, Gangneux JP, Hau I, Le Bourgeois M, Lorrot M, Menotti J, Nathan N, Vabret A, Wallet F, Bonacorsi S, Cohen R, de Blic J, Deschildre A, Gandemer V, Pin I, Labbe A, Le Roux P, Martinot A, Rammaert S, Gdrslaepp(, Dubus JC, Delacourt C, Marguet C
[Recommendations for the use of diagnostic testing in low respiratory infection in children older than 3 months].
Archives De Pédiatrie: Organe Officiel De La Sociéte Française De Pédiatrie 2014, 21, 418-423.

Lorrot M, Bourrat E, Doit C, Prot-Labarthe S, Dauger S, Faye A, Blondé R, Gillet Y, Grimprel E, Moulin F, Quinet B, Cohen R, Bonacorsi S
[Superficial skin infections and bacterial dermohypodermitis].
Archives De Pédiatrie: Organe Officiel De La Sociéte Française De Pédiatrie 2014, 21, 906-912.

Levy C, Varon E, Taha MK, Béchet S, Bonacorsi S, Cohen R, Bingen E
[Change in French bacterial meningitis in children resulting from vaccination].
Archives De Pédiatrie: Organe Officiel De La Sociéte Française De Pédiatrie 2014, 21, 736-744.

Basmaci R, Ilharreborde B, Bonacorsi S, Kahil M, Mallet C, Aupiais C, Doit C, Dugué S, Lorrot M
[Septic arthritis in children with normal initial C-reactive protein: clinical and biological features].
Archives De Pediatrie: Organe Officiel De La Societe Francaise De Pediatrie 2014, 21, 1195-1199.

Lefèvre CT, Bennet M, Landau L, Vach P, Pignol D, Bazylinski DA, Frankel RB, Klumpp S, Faivre D
Diversity of magneto-aerotactic behaviors and oxygen sensing mechanisms in cultured magnetotactic bacteria.
Biophysical Journal 2014, 107, 527-538.

Amsallem M, Iung B, Bouleti C, Armand-Lefevre L, Eme AL, Touati A, Kirsch M, Duval X, Vahanian A
First reported human case of native mitral infective endocarditis caused by Streptococcus canis.
The Canadian Journal of Cardiology 2014, 30, 1462.e1-2.

Porres-Osante N, de Champs C, Dupont H, Torres C, Mammeri H
Use of avibactam to detect Ambler class A carbapenemases and OXA-48 β-lactamases in Enterobacteriaceae.
Diagnostic Microbiology and Infectious Disease 2014, 79, 399-400.

Ezraty B, Henry C, Hérisse M, Denamur E, Barras F
Commercial Lysogeny Broth culture media and oxidative stress: A cautious tale.
Free Radical Biology & Medicine 2014, 74, 245-251.

Lefort A, Chau F, Lepeule R, Dubée V, Kitzis MD, Dion S, Fantin B
Activity of fosfomycin alone or combined with cefoxitin in vitro and in vivo in a murine model of urinary tract infection due to Escherichia coli harbouring CTX-M-15-type extended-spectrum β-lactamase.
International Journal of Antimicrobial Agents 2014, 43, 366-369.

Bousquet A, Duprilot M, Moissenet D, Salauze B, Rambaud J, Genel N, Vu-Thien H, Arlet G, Decré D
First case of multidrug-resistant blaNDM-1- and blaOXA-232-carrying Klebsiella pneumoniae and its probable cross-transmission in a French hospital.
International Journal of Antimicrobial Agents 2014, 44, 469-470.

Tattevin P, Revest M, Lefort A, Michelet C, Lortholary O
Fungal endocarditis: current challenges.
International Journal of Antimicrobial Agents 2014, 44, 290-294.

Pierre I, Zarrouk V, Noussair L, Molina JM, Fantin B
Invasive actinomycosis: surrogate marker of a poor prognosis in immunocompromised patients.
International journal of infectious diseases: IJID: official publication of the International Society for Infectious Diseases 2014, 29, 74-79.

Compain F, Poisson A, Le Hello S, Branger C, Weill FX, Arlet G, Decré D
Targeting relaxase genes for classification of the predominant plasmids in Enterobacteriaceae.
International journal of medical microbiology: IJMM 2014, 304, 236-242.

Dahbi G, Mora A, Mamani R, López C, Alonso MP, Marzoa J, Blanco M, Herrera A, Viso S, García-Garrote F, Tchesnokova V, Billig M, de la Cruz F, de Toro M, González-López JJ, Prats G, Chaves F, Martínez-Martínez L, López-Cerezo L, Denamur E, Blanco J
Molecular epidemiology and virulence of Escherichia coli O16:H5-ST131: comparison with H30 and H30-Rx subclones of O25b:H4-ST131.
International journal of medical microbiology: IJMM 2014, 304, 1247-1257.

Roux AL, Catherinot E, Soismier N, Heym B, Bellis G, Lemonnier L, Chiron R, Fauroux B, Le Bourgeois M, Munck A, Pin I, Sermet I, Gutierrez C, Véziris N, Jarlier V, Cambau E, Herrmann JL, Guillemot D, Gaillard JL, ftOg
Comparing Mycobacterium massiliense and Mycobacterium abscessus lung infections in cystic fibrosis patients.
Journal of Cystic Fibrosis: Official Journal of the European Cystic Fibrosis Society 2014

Messika J, Sztrymf B, Bertrand F, Billard-Pomares T, Barnaud G, Branger C, Dreyfuss D, Ricard JD
Risks of nonsteroidal antiinflammatory drugs in undiagnosed intensive care unit pneumococcal pneumonia: Younger and more severely affected patients.
Journal of Critical Care 2014, 29, 733-738.

Gaudry S, Ricard JD, Leclaire C, Rafat C, Messika J, Bedet A, Regard L, Hajage D, Dreyfuss D
Acute kidney injury in critical care: Experience of a conservative strategy.
Journal of Critical Care 2014

Contou D, d'Ythurbide G, Messika J, Ridel C, Parrot A, Djibré M, Hertig A, Rondeau E, Fartoukh M
Description and predictive factors of infection in patients with chronic kidney disease admitted to the critical care unit.
The Journal of Infection 2014, 68, 105-115.

Edouard S, Million M, Royer G, Giorgi R, Grisoli D, Raoult D
Reduction in incidence of Q fever endocarditis: 27 years of experience of a national reference center.
The Journal of Infection 2014, 68, 141-148.

Pilmis B, Lefort A, Lecuit M, Join-Lambert O, Nassif X, Lortholary O, Charlier C
Endocarditis due to Neisseria mucosa: case report and review of 21 cases: a rare and severe cause of endocarditis.
The Journal of Infection 2014, 68, 601-604.

Lugosi M, Alberti C, Zahar JR, Garrouste M, Lemiale V, Descorps-Desclère A, Ricard JD, Goldgran-Tolédano D, Cohen Y, Schwebel C, Vésin A, Timsit JF, Azoulay E
Aspergillus in the lower respiratory tract of immunocompetent critically ill patients.
The Journal of Infection 2014, 69, 284-292.

Berthe-Aucejo A, Papon A, Doit C, Costa J, Bourdon O
[How to improve supervision of carbapenem's prescriptions? Development of a cross-disciplinary computerized system].
Presse Médicale (Paris, France: 1983) 2014, 43, 219-221.

Jolly D, Ambrosi P, Chaffanjon P, Dreyfuss D, Le Jeunne C, Lorette G, Obert L, Palombi O, Romanet JP
[Results of the 2013 national ranking in France].
Presse Médicale (Paris, France: 1983) 2014, 43, 865-867.

Marc F, Esquirol C, Papy E, Longuet P, Armand-Lefevre L, Rioux C, Diamantis S, Dumortier C, Bourgeois-Nicolaos N, Lucet JC, Wolff M, Arnaud P
A retrospective study of daptomycin use in a Paris teaching-hospital.
Médecine et maladies infectieuses 2014, 44, 25-31.

Neulier C, Birgand G, Ruppé E, Armand-Lefèvre L, Lolom I, Yazdanpanah Y, Lucet JC, Andremont A
Enterobacteriaceae bacteremia: Risk factors for ESBLPE.
Médecine et maladies infectieuses 2014, 44, 32-38.

Shoai Tehrani M, Hajage D, Fihman V, Tankovic J, Cau S, Day N, Visseaux C, Carbonnelle E, Kouatchet A, Cattoir V, Nhan TX, Corvec S, Jacquier H, Jauréguy F, Le Monnier A, Morand P, Zahar JR, obtGdmc
Gram-negative bacteremia: which empirical antibiotic therapy?.
Médecine Et Maladies Infectieuses 2014, 44, 159-166.

Lepeule R, Leflon-Guibout V, Vanjak D, Zahar JR, Lafaurie M, Besson C, Lefort A, GdReIddF(
Clinical spectrum of urine cultures positive for ESBL-producing Escherichia coli in hospitalized patients and impact on antibiotic use.
Medecine Et Maladies Infectieuses 2014, 44, 530-534.

Clermont O, Christenson JK, Daubié AS, Gordon DM, Denamur E
Development of an allele-specific PCR for Escherichia coli B2 sub-typing, a rapid and easy to perform substitute of multilocus sequence typing.
Journal of Microbiological Methods 2014, 101, 24-27.

Macheras E, Konjek J, Roux AL, Thiberge JM, Bastian S, Leão SC, Palaci M, Sivadon-Tardy V, Gutierrez C, Richter E, Rüsch-Gerdes S, Pfyffer GE, Bodmer T, Jarlier V, Cambau E, Brisse S, Caro V, Rastogi N, Gaillard JL, Heym B
Multilocus sequence typing scheme for the Mycobacterium abscessus complex.
Research in Microbiology 2014, 165, 82-90.

Lemaignen A, Goulenok T, Kalamarides S, Plat A, Pfau G, Fantin B
[Agranulocytosis and vasculitis in a cocaine addict: Levamisole, the hidden culprit].
La Revue De Médecine Interne / Fondée ... Par La Société Nationale Francaise De Médecine Interne 2014, 35, 676-679.

de Lastours V, Fantin B
[Resistance to fluoroquinolones in 2013: what are the consequences in internal medicine?].
La Revue De Médecine Interne / Fondée ... Par La Société Nationale Francaise De Médecine Interne 2014, 35, 601-608.

Fillion A, Koutlidis N, Froissart A, Fantin B
[Investigation and management of genito-urinary tuberculosis.].
La Revue De Medecine Interne / Fondee ... Par La Societe Nationale Francaise De Medecine Interne 2014

Bidet P, Plainvert C, Bonacorsi S
Escherichia coli "O45:K1:H7-B2-ST95" harbor an O-antigen cross reacting with reference antigen O45 that should be designated O45S88.
Veterinary Microbiology 2014, 168, 459.

Bidet P, Bonacorsi S
[Streptococcus pyogenes pathogenic factors].
Archives De Pédiatrie: Organe Officiel De La Sociéte Française De Pédiatrie 2014, 21 Suppl 2, S54-61.

Wollner A, Levy C, Benani M, Thollot F, Béchet S, Cohen J, Bonacorsi S, Bidet P, Cohen R
[Use of group A streptococcal rapid diagnostic test in extra-pharyngeal infections].
Archives De Pédiatrie: Organe Officiel De La Sociéte Française De Pédiatrie 2014, 21 Suppl 2, S84-86.

Faye A, Lorrot M, Bidet P, Bonacorsi S, Cohen R
[Management of severe invasive group A streptococcal infections].
Archives De Pédiatrie: Organe Officiel De La Sociéte Française De Pédiatrie 2014, 21 Suppl 2, S87-92.

Cohen R, Levy C, Cohen J, Corrard F, Deberdt P, Béchet S, Bonacorsi S, Bidet P
[Diagnostic of group A streptococcal blistering distal dactylitis].
Archives De Pédiatrie: Organe Officiel De La Sociéte Française De Pédiatrie 2014, 21 Suppl 2, S93-96.

Koskas M, Levy C, Romain O, Schlemmer C, Béchet S, Bonacorsi S, Bidet P, Cohen R
[Group A streptococcal perineal infection in children].
Archives De Pédiatrie: Organe Officiel De La Sociéte Française De Pédiatrie 2014, 21 Suppl 2, S97-S100.

Levy C, Bidet P, Bonacorsi S, Béchet S, Cohen R
[Characteristics of group A streptococcal meningitis in children].
Archives De Pédiatrie: Organe Officiel De La Sociéte Française De Pédiatrie 2014, 21 Suppl 2, S101-103.

La Ruche G, Sednaoui P, Berçot B, Cambau E, Semaille C
Decreased susceptibility to cephalosporins among gonococci?.
The Lancet. Infectious Diseases 2014, 14, 184-185.

Roubaud Baudron C, Panhard X, Clermont O, Mentré F, Fantin B, Denamur E, Lefort A, CG
Escherichia coli bacteraemia in adults: age-related differences in clinical and bacteriological characteristics, and outcome.
Epidemiology and Infection 2014, 142, 2672-2683.

Delafont V, Mougaris F, Cambau E, Joyeux M, Bouchon D, Hechard Y, Moulin L
First evidence of amoebae - mycobacteria association in drinking water network.
Environmental Science & Technology 2014

Rafat C, Haymann JP, Gaudry S, Labbé V, Miguel-Montanes R, Dufour N, Daudon M, Dreyfuss D, Ricard JD
The case: a crystal-clear diagnosis: acute kidney injury in a patient with suspected meningoencephalitis. Diagnosis: Amoxicillin-induced crystal nephropathy.
Kidney International 2014, 86, 1065-1066.

Asfar P, Meziani F, Hamel JF, Grelon F, Megarbane B, Anguel N, Mira JP, Dequin PF, Gergaud S, Weiss N, Legay F, Le Tulzo Y, Conrad M, Robert R, Gonzalez F, Guitton C, Tamion F, Tonnelier JM, Guezennec P, Van Der Linden T, Vieillard-Baron A, Mariotte E, Pradel G, Lesieur O, Ricard JD, Hervé F, du Cheyron D, Guerin C, Mercat A, Teboul JL, Radermacher P, SI
High versus low blood-pressure target in patients with septic shock.
The New England Journal of Medicine 2014, 370, 1583-1593.

Birgand G, Schwarzinger M, Perozziello A, Lolom I, Pelat C, Armand-Lefevre L, Buzzi JC, Andremont A, Yazdanpanah Y, Lucet JC
Prolonged hospital stay, an adverse effect of strict national policy for controlling the spread of highly resistant microorganisms.
Infection Control and Hospital Epidemiology 2014, 35, 1427-1429.

Mekontso Dessap A, Jansen C, Boissier F, Razazi K, de Prost N, Michaud G, Cizeau F, Ducellier D, Abid S, Decousser JW, Brun-Buisson C
Risk of cross transmission with point-of-care ultrasound system: effect of a glass-sealed control panel on microbial contamination.
Infection Control and Hospital Epidemiology 2014, 35, 1539-1542.

Taron-Brocard C, Le Chenadec J, Faye A, Dollfus C, Goetghebuer T, Gajdos V, Labaune JM, Perilhou A, Mandelbrot L, Blanche S, Warszawski J, FRNSHHEPFCSG
Increased risk of serious bacterial infections due to maternal immunosuppression in HIV-exposed uninfected infants in a European country.
Clinical Infectious Diseases: An Official Publication of the Infectious Diseases Society of America 2014, 59, 1332-1345.

Lerat I, Cambau E, Roth Dit Bettoni R, Gaillard JL, Jarlier V, Truffot C, Veziris N
In vivo evaluation of antibiotic activity against Mycobacterium abscessus.
The Journal of Infectious Diseases 2014, 209, 905-912.

Roux D, Ricard JD
Secondary bacterial infection following first viral or fungal hit: could granulocyte-macrophage colony-stimulating factor help?.
The Journal of Infectious Diseases 2014, 210, 1339-1340.

Marcadé G, Micol JB, Jacquier H, Raskine L, Donay JL, Nicolas-Viaud S, Rouveau M, Ribaud P, Dombret H, Leclercq R, Cambau E
Outbreak in a haematology unit involving an unusual strain of glycopeptide-resistant Enterococcus faecium carrying both vanA and vanB genes.
The Journal of Antimicrobial Chemotherapy 2014, 69, 500-505.

Grohs P, Kernéis S, Sabatier B, Lavollay M, Carbonnelle E, Rostane H, Souty C, Meyer G, Gutmann L, Mainardi JL
Fighting the spread of AmpC-hyperproducing Enterobacteriaceae: beneficial effect of replacing ceftriaxone with cefotaxime.
The Journal of Antimicrobial Chemotherapy 2014, 69, 786-789.

de Lastours V, Bleibtreu A, Chau F, Burdet C, Duval X, Denamur E, Fantin B
Quinolone-resistant Escherichia coli from the faecal microbiota of healthy volunteers after ciprofloxacin exposure are highly adapted to a commensal lifestyle.
The Journal of Antimicrobial Chemotherapy 2014, 69, 761-768.

Blanc V, Leflon-Guibout V, Blanco J, Haenni M, Madec JY, Rafignon G, Bruno P, Mora A, Lopez C, Dahbi G, Dunais B, Anastay M, Branger C, Moreau R, Pradier C, Nicolas-Chanoine MH
Prevalence of day-care centre children (France) with faecal CTX-M-producing Escherichia coli comprising O25b:H4 and O16:H5 ST131 strains.
The Journal of Antimicrobial Chemotherapy 2014, 69, 1231-1237.

Porres-Osante N, Dupont H, Torres C, Ammenouche N, de Champs C, Mammeri H
Avibactam activity against extended-spectrum AmpC β-lactamases.
The Journal of Antimicrobial Chemotherapy 2014, 69, 1715-1716.

Robert J, Pantel A, Mérens A, Lavigne JP, Nicolas-Chanoine MH, OCRSG
Incidence rates of carbapenemase-producing Enterobacteriaceae clinical isolates in France: a prospective nationwide study in 2011-12.
The Journal of Antimicrobial Chemotherapy 2014, 69, 2706-2712.

de Lastours V, Chau F, Roy C, Larroque B, Fantin B
Emergence of quinolone resistance in the microbiota of hospitalized patients treated or not with a fluoroquinolone.
The Journal of Antimicrobial Chemotherapy 2014

Dreyfuss D, Eidelman M
Treatment of complex intercondylar humeral fractures in adolescents by open reduction and internal fixation through the transolecranon approach.
Journal of Pediatric Orthopedics. Part B 2014, 23, 364-368.

Roux D, Reignier J, Thiery G, Boyer A, Hayon J, Souweine B, Papazian L, Mercat A, Bernardin G, Combes A, Chiche JD, Diehl JL, du Cheyron D, L'her E, Perrotin D, Schneider F, Thuong M, Wolff M, Zeni F, Dreyfuss D, Ricard JD
Acquiring procedural skills in ICUs: a prospective multicenter study*.
Critical Care Medicine 2014, 42, 886-895.

Caeymaex L, Varon E, Levy C, Béchet S, Derkx V, Desvignes V, Doit C, Cohen R
Characteristics and outcomes of acute otitis media in children carrying streptococcus pneumoniae or haemophilus influenzae in their nasopharynx as a single otopathogen after introduction of the heptavalent pneumococcal conjugate vaccine.
The Pediatric Infectious Disease Journal 2014, 33, 533-536.

Madhi F, Godot C, Bidet P, Bahuaud M, Epaud R, Cohen R
Serotype 3 pneumococcal pleural empyema in an immunocompetent child after 13-valent pneumococcal conjugate vaccine.
The Pediatric Infectious Disease Journal 2014, 33, 545-546.

Burdet C, Clermont O, Bonacorsi S, Laouénan C, Bingen E, Aujard Y, Mentré F, Lefort A, Denamur E, CG
Escherichia coli bacteremia in children: age and portal of entry are the main predictors of severity.
The Pediatric Infectious Disease Journal 2014, 33, 872-879.

Levy C, Varon E, Picard C, Béchet S, Martinot A, Bonacorsi S, Cohen R
Trends of Pneumococcal Meningitis in Children after Introduction of the 13-Valent Pneumococcal Conjugate Vaccine in France.
The Pediatric Infectious Disease Journal 2014

Mallet C, Ceroni D, Litzelmann E, Dubois-Ferriere V, Lorrot M, Bonacorsi S, Mazda K, Ilharreborde B
Unusually severe cases of Kingella kingae osteoarticular infections in children.
The Pediatric Infectious Disease Journal 2014, 33, 1-4.

Jlili NEH, Réjiba S, Smaoui H, Guillard T, Chau F, Kechrid A, Cambau E
Trend of plasmid-mediated quinolone resistance genes at the Children's Hospital in Tunisia.
Journal of Medical Microbiology 2014, 63, 195-202.

Cambau E, Drancourt M
Steps towards the discovery of Mycobacterium tuberculosis by Robert Koch, 1882.
Clinical Microbiology and Infection: The Official Publication of the European Society of Clinical Microbiology and Infectious Diseases 2014, 20, 196-201.

Valour F, Tasse J, Trouillet-Assant S, Rasigade JP, Lamy B, Chanard E, Verhoeven P, Decousser JW, Marchandin H, Bès M, Chidiac C, Vandenesch F, Ferry T, Laurent F, LBaJIsg
Methicillin-susceptible Staphylococcus aureus clonal complex 398: high prevalence and geographical heterogeneity in bone and joint infection and nasal carriage.
Clinical Microbiology and Infection: The Official Publication of the European Society of Clinical Microbiology and Infectious Diseases 2014, 20, O772-775.

Birgand G, Armand-Lefevre L, Lepainteur M, Lolom I, Neulier C, Reibel F, Yazdanpanah Y, Andremont A, Lucet JC
Introduction of highly resistant bacteria into a hospital via patients repatriated or recently hospitalized in a foreign country.
Clinical Microbiology and Infection: The Official Publication of the European Society of Clinical Microbiology and Infectious Diseases [RESEARCH NOTE] 2014, 20, O887-890.

Basmaci R, Bonacorsi S, Bidet P, Balashova NV, Lau J, Muñoz-Almagro C, Gene A, Yagupsky P
Genotyping, local prevalence and international dissemination of β-lactamase-producing Kingella kingae strains.
Clinical Microbiology and Infection: The Official Publication of the European Society of Clinical Microbiology and Infectious Diseases 2014, 20, O811-817.

Grohs P, Podglajen I, Guerot E, Bellenfant F, Caumont-Prim A, Kac G, Tillecovidin B, Carbonnelle E, Chatellier G, Meyer G, Fagon JY, Gutmann L
Assessment of five screening strategies for optimal detection of carriers of third-generation cephalosporin-resistant Enterobacteriaceae in intensive care units using daily sampling.
Clinical Microbiology and Infection: The Official Publication of the European Society of Clinical Microbiology and Infectious Diseases 2014, 20, O879-886.

Saussereau E, Vachier I, Chiron R, Godbert B, Sermet I, Dufour N, Pirnay JP, De Vos D, Carrié F, Molinari N, Debarbieux L
Effectiveness of bacteriophages in the sputum of cystic fibrosis patients.
Clinical Microbiology and Infection: The Official Publication of the European Society of Clinical Microbiology and Infectious Diseases 2014

Surgers L, Bleibtreu A, Burdet C, Clermont O, Laouénan C, Lefort A, Mentré F, Carbonne B, Bingen E, Meynard JL, Denamur E, CG
Escherichia coli bacteraemia in pregnant women is life-threatening for foetuses.
Clinical Microbiology and Infection: The Official Publication of the European Society of Clinical Microbiology and Infectious Diseases 2014, 20, O1035-1041.

Couffignal C, Pajot O, Laouénan C, Burdet C, Foucrier A, Wolff M, Armand-Lefevre L, Mentré F, Massias L
Population pharmacokinetics of imipenem in critically ill patients with suspected ventilator-associated pneumonia and evaluation of dosage regimens.
British Journal of Clinical Pharmacology 2014, 78, 1022-1034.

Périchon B, Goussard S, Walewski V, Krizova L, Cerqueira G, Murphy C, Feldgarden M, Wortman J, Clermont D, Nemec A, Courvalin P
Identification of 50 class D β-lactamases and 65 Acinetobacter-derived cephalosporinases in Acinetobacter spp.
Antimicrobial Agents and Chemotherapy 2014, 58, 936-949.

Bourgeois-Nicolaos N, Nguyen TT, Defrance G, Massias L, Alavoine L, Lefort A, Noel V, Senneville E, Doucet-Populaire F, Mentré F, Andremont A, Duval X
The emergence of linezolid resistance among Enterococci in intestinal microbiota of treated patients is unrelated to individual pharmacokinetic characteristics.
Antimicrobial Agents and Chemotherapy 2014, 58, 2681-2687.

Réminiac F, Sonneville R, Massias L, Chochillon C, Wolff M
Very-high-dose caspofungin combined with voriconazole to treat central nervous system aspergillosis: substantial penetration of caspofungin into cerebrospinal fluid.
Antimicrobial Agents and Chemotherapy 2014, 58, 3568-3569.

Billard-Pomares T, Fouteau S, Jacquet ME, Roche D, Barbe V, Castellanos M, Bouet JY, Cruveiller S, Médigue C, Blanco J, Clermont O, Denamur E, Branger C
Characterization of a P1-like bacteriophage encoding an SHV-2 extended-spectrum β-lactamase from an Escherichia coli strain.
Antimicrobial Agents and Chemotherapy 2014

Ammenouche N, Dupont H, Mammeri H
Characterization of a Novel AmpC β-Lactamase Produced by a Carbapenem-Resistant Cedecea davisae Clinical Isolate.
Antimicrobial Agents and Chemotherapy 2014

Jure MA, Duprilot M, Musa HE, López C, de Castillo MC, Weill FX, Arlet G, Decré D
Emergence of KPC-2-Producing Salmonella enterica Serotype Schwarzengrund in Argentina.
Antimicrobial Agents and Chemotherapy 2014, 58, 6335-6336.

Basmaci R, Bidet P, Berçot B, Jost C, Kwon T, Gaumetou E, Bonacorsi S
First identification of a chromosomally located penicillinase gene in Kingella kingae species isolated in continental Europe.
Antimicrobial Agents and Chemotherapy 2014, 58, 6258-6259.

Lemaître C, Bidet P, Benoist JF, Schlemmer D, Sobral E, d'Humières C, Bonacorsi S
The ssbL gene harbored by the ColV plasmid of an Escherichia coli neonatal meningitis strain is an auxiliary virulence factor boosting the production of siderophores through the shikimate pathway.
Journal of Bacteriology 2014, 196, 1343-1349.

Bleibtreu A, Clermont O, Darlu P, Glodt J, Branger C, Picard B, Denamur E
The rpoS gene is predominantly inactivated during laboratory storage and undergoes source-sink evolution in Escherichia coli species.
Journal of Bacteriology 2014, 196, 4276-4284.

Fangous MS, Mougari F, Gouriou S, Calvez E, Raskine L, Cambau E, Payan C, Héry-Arnaud G
Classification Algorithm for Subspecies Identification within the Mycobacterium abscessus Species, Based on Matrix-Assisted Laser Desorption Ionization-Time of Flight Mass Spectrometry.
Journal of Clinical Microbiology 2014, 52, 3362-3369.

Amara M, Bonacorsi S, Bedel J, Mira JP, Laurent V, Socha K, Bruneel F, Pangon B, Bédos JP, Grimaldi D
Group A Escherichia coli-related purpura fulminans: an unusual manifestation due to an unusual strain?.
Journal of Clinical Microbiology 2014

Basmaci R, Bidet P, Yagupsky P, Muñoz-Almagro C, Balashova NV, Doit C, Bonacorsi S
Major intercontinentally distributed sequence types of Kingella kingae and development of a rapid molecular typing tool.
Journal of Clinical Microbiology 2014, 52, 3890-3897.

Jost C, Bercot B, Jacquier H, Raskine L, Barranger E, Mouchnino G, Cambau E
Xpert GBS assay for rapid detection of group B streptococcus in gastric fluid samples from newborns.
Journal of Clinical Microbiology 2014, 52, 657-659.

Johnson JR, Clermont O, Johnston B, Clabots C, Tchesnokova V, Sokurenko E, Junka AF, Maczynska B, Denamur E
Rapid and specific detection, molecular epidemiology, and experimental virulence of the O16 subgroup within Escherichia coli sequence type 131.
Journal of Clinical Microbiology 2014, 52, 1358-1365.

Mougari F, Raskine L, Ferroni A, Marcon E, Sermet-Gaudelus I, Veziris N, Heym B, Gaillard JL, Nassif X, Cambau E
Clonal relationship and differentiation among Mycobacterium abscessus isolates as determined using the semiautomated repetitive extragenic palindromic sequence PCR-based DiversiLab system.
Journal of Clinical Microbiology 2014, 52, 1969-1977.

Lu X, Skurnik D, Pozzi C, Roux D, Cywes-Bentley C, Ritchie JM, Munera D, Gening ML, Tsvetkov YE, Nifantiev NE, Waldor MK, Pier GB
A Poly-N-acetylglucosamine-Shiga toxin broad-spectrum conjugate vaccine for Shiga toxin-producing Escherichia coli.
mBio 2014, 5, e00974-00914.

Bremond-Gignac D, Nezzar H, Bianchi PE, Messaoud R, Lazreg S, Voinea L, Speeg-Schatz C, Hartani D, Kaercher T, Kocyla-Karczmarewicz B, Murta J, Delval L, Renault D, Chiambaretta F, ASG
Efficacy and safety of azithromycin 1.5% eye drops in paediatric population with purulent bacterial conjunctivitis.
The British Journal of Ophthalmology 2014, 98, 739-745.

Abgrall S, Fugon L, Lélé N, Carde E, Bentata M, Patey O, Khuong MA, Spire B, Bouchaud O, Carrieri P, AVsg
Risk factors for adherence failure in HIV-infected sub-Saharan migrants living in France and travelling back to their native country.
International journal of STD & AIDS 2014, 25, 389-390.

Mizrahi A, Cohen R, Varon E, Bonacorsi S, Bechet S, Poyart C, Levy C, Raymond J
Non typable-Haemophilus influenzae biofilm formation and acute otitis media.
BMC infectious diseases 2014, 14, 400.

Schmidt M, Freund Y, Alves M, Monsel A, Labbe V, Darnal E, Messika J, Bokobza J, Similowski T, Duguet A
Video-based feedback of oral clinical presentations reduces the anxiety of ICU medical students: a multicentre, prospective, randomized study.
BMC medical education 2014, 14, 103.

Fernandez I, Brito RM, Bidet P, Rallu F, Laferrière C, Ovetchkine P, Le Deist F
Invasive group A Streptococcus disease in French-Canadian children is not associated with a defect in MyD88/IRAK4-pathway.
Allergy, Asthma, and Clinical Immunology: Official Journal of the Canadian Society of Allergy and Clinical Immunology 2014, 10, 9.

Vigan M, Stirnemann J, Caillaud C, Froissart R, Boutten A, Fantin B, Belmatoug N, Mentré F
Modeling changes in biomarkers in Gaucher disease patients receiving enzyme replacement therapy using a pathophysiological model.
Orphanet Journal of Rare Diseases 2014, 9, 95.

Chenoune M, De Rochefort L, Bruneval P, Lidouren F, Kohlhauer M, Seemann A, Ghaleh B, Korn M, Dubuisson RM, Ben Yahmed A, Maître X, Isabey D, Ricard JD, Kerber RE, Darrasse L, Berdeaux A, Tissier R
Evaluation of lung recovery after static administration of three different perfluorocarbons in pigs.
BMC pharmacology & toxicology 2014, 15, 53.

Daubin C, Haddad L, Folscheid D, Boyer A, Chalumeau-Lemoine L, Guisset O, Hubert P, Pillot J, Robert R, Dreyfuss D
Ethical reflections on end-of-life signs and symptoms in the intensive care setting: a place for neuromuscular blockers?.
Annals of Intensive Care 2014, 4, 23.

Robert R, Salomon L, Haddad L, Graftieaux JP, Eon B, Dreyfuss D, ecotFSoCC(
End of life in the intensive care unit: should French law be adapted?.
Annals of Intensive Care 2014, 4, 6.

Desbois A, Rautou P, Biard L, Belmatoug N, Wechsler B, Resche-Rigon M, Zarrouk V, Fantin B, Pineton de Chambrun M, Cacoub P, Valla D, Saadoun D, Plessier A
Behcet¿s disease in Budd-Chiari syndrome.
Orphanet Journal of Rare Diseases 2014, 9, 104.

Nguyen TT, Guedj J, Chachaty E, de Gunzburg J, Andremont A, Mentré F
Mathematical modeling of bacterial kinetics to predict the impact of antibiotic colonic exposure and treatment duration on the amount of resistant enterobacteria excreted.
PLoS computational biology 2014, 10, e1003840.

Mora A, Dahbi G, López C, Mamani R, Marzoa J, Dion S, Picard B, Blanco M, Alonso MP, Denamur E, Blanco J
Virulence patterns in a murine sepsis model of ST131 Escherichia coli clinical isolates belonging to serotypes O25b:H4 and O16:H5 are associated to specific virotypes.
PloS One 2014, 9, e87025.

Guillard T, Grillon A, de Champs C, Cartier C, Madoux J, Berçot B, Lebreil AL, Lozniewski A, Riahi J, Vernet-Garnier V, Cambau E
Mobile insertion cassette elements found in small non-transmissible plasmids in Proteeae may explain qnrD mobilization.
PloS One 2014, 9, e87801.

Rafat C, Schortgen F, Gaudry S, Bertrand F, Miguel-Montanes R, Labbé V, Ricard JD, Hajage D, Dreyfuss D
Use of desmopressin acetate in severe hyponatremia in the intensive care unit.
Clinical journal of the American Society of Nephrology: CJASN 2014, 9, 229-237.

Soubirou JF, Gault N, Alfaiate T, Lolom I, Tubach F, Andremont A, Lucet JC, Wolff M, Barbier F
Ventilator-associated pneumonia due to carbapenem-resistant Gram-negative bacilli in an intensive care unit without carbapenemase-producing Enterobacteriaceae or epidemic Acinetobacter baumannii.
Scandinavian Journal of Infectious Diseases 2014, 46, 215-220.

Compain F, Decré D, Frazier I, Ramahefasolo A, Lavollay M, Carbonnelle E, Rostane H, Tackin A, Berger-Carbonne A, Podglajen I
Carbapenemase-producing bacteria in patients hospitalized abroad, France.
Emerging Infectious Diseases 2014, 20, 1246-1248.

Payros D, Secher T, Boury M, Brehin C, Ménard S, Salvador-Cartier C, Cuevas-Ramos G, Watrin C, Marcq I, Nougayrède JP, Dubois D, Bedu A, Garnier F, Clermont O, Denamur E, Plaisancié P, Theodorou V, Fioramonti J, Olier M, Oswald E
Maternally acquired genotoxic Escherichia coli alters offspring's intestinal homeostasis.
Gut Microbes 2014, 5, 313-325.

Genuini M, Prot-Labarthe S, Bourdon O, Doit C, Aujard Y, Naudin J, Lorrot M
Fluoroquinolones in pediatrics: review of hospital prescription use over 2 years.
International Journal of Clinical Pharmacology and Therapeutics 2014

Margetis D, Maury E, Boelle PY, Alves M, Galbois A, Baudel JL, Offenstadt G, Guidet B, Ait-Oufella H
Peripheral microcirculatory exploration during mechanical ventilation weaning.
Minerva Anestesiologica 2014

Ruppe E, Armand-Lefevre L, Estellat C, El-Mniai A, Boussadia Y, Consigny P, Girard P, Vittecoq D, Bouchaud O, Pialoux G, Esposito-Farese M, Coignard B, Lucet J, Andremont A, Matheron S
Acquisition of carbapenemase-producing Enterobacteriaceae by healthy travellers to India, France, February 2012 to March 2013.
Euro surveillance: bulletin Européen sur les maladies transmissibles = European communicable disease bulletin 2014, 19,

Dubée V, Zeller V, Fantin B
[Infections associated with orthopaedic devices].
La Revue Du Praticien 2014, 64, 643-650.

La Ruche G, Goubard A, Bercot B, Cambau E, Semaille C, Sednaoui P
Gonococcal infections and emergence of gonococcal decreased susceptibility to cephalosporins in France, 2001 to 2012.
Euro Surveillance: Bulletin Européen Sur Les Maladies Transmissibles = European Communicable Disease Bulletin 2014, 19,

Bercot B, Belkacem A, Goubard A, Mougari F, Sednaoui P, La Ruche G, Cambau E
High-level azithromycin-resistant Neisseria gonorrhoeae clinical isolate in France, March 2014.
Euro Surveillance: Bulletin Européen Sur Les Maladies Transmissibles = European Communicable Disease Bulletin 2014, 19,

 2013                                                                            

DRCRN
Randomized clinical trial evaluating intravitreal ranibizumab or saline for vitreous hemorrhage from proliferative diabetic retinopathy.
JAMA ophthalmology 2013, 131, 283-293.

Azoulay E, Kouatchet A, Jaber S, Lambert J, Meziani F, Schmidt M, Schnell D, Mortaza S, Conseil M, Tchenio X, Herbecq P, Andrivet P, Guerot E, Lafabrie A, Perbet S, Camous L, Janssen-Langenstein R, Collet F, Messika J, Legriel S, Fabre X, Guisset O, Touati S, Kilani S, Alves M, Mercat A, Similowski T, Papazian L, Meert AP, Chevret S, Schlemmer B, Brochard L, Demoule A
Noninvasive mechanical ventilation in patients having declined tracheal intubation.
Intensive Care Medicine 2013, 39, 292-301.

Roux D, Surugue G, Gaudry S, Wolff M
An intragastric chest tube insertion.
Intensive Care Medicine 2013, 39, 2207-2208.

Angebault C, Andremont A
Antimicrobial agent exposure and the emergence and spread of resistant microorganisms: issues associated with study design.
European Journal of Clinical Microbiology & Infectious Diseases: Official Publication of the European Society of Clinical Microbiology 2013, 32, 581-595.

Cohen JF, Chalumeau M, Levy C, Bidet P, Benani M, Koskas M, Bingen E, Cohen R
Effect of clinical spectrum, inoculum size and physician characteristics on sensitivity of a rapid antigen detection test for group A streptococcal pharyngitis.
European Journal of Clinical Microbiology & Infectious Diseases: Official Publication of the European Society of Clinical Microbiology 2013, 32, 787-793.

Goulenok T, Fantin B
Antimicrobial treatment of febrile neutropenia: pharmacokinetic-pharmacodynamic considerations.
Clinical Pharmacokinetics 2013, 52, 869-883.

Birgand G, Armand-Lefevre L, Lolom I, Ruppe E, Andremont A, Lucet JC
Duration of colonization by extended-spectrum β-lactamase-producing Enterobacteriaceae after hospital discharge.
American Journal of Infection Control 2013, 41, 443-447.

Decousser JW, Ramarao N, Duport C, Dorval M, Bourgeois-Nicolaos N, Guinebretière MH, Razafimahefa H, Doucet-Populaire F
Bacillus cereus and severe intestinal infections in preterm neonates: Putative role of pooled breast milk.
American Journal of Infection Control 2013, 41, 918-921.

Biendo M, Mammeri H, Pluquet E, Guillon H, Rousseau F, Canarelli B, Belmekki M, Eb F
Value of Xpert MRSA/SA blood culture assay on the Gene Xpert® Dx System for rapid detection of Staphylococcus aureus and coagulase-negative staphylococci in patients with staphylococcal bacteremia.
Diagnostic Microbiology and Infectious Disease 2013, 75, 139-143.

Potron A, Rondinaud E, Poirel L, Belmonte O, Boyer S, Camiade S, Nordmann P
Genetic and biochemical characterisation of OXA-232, a carbapenem-hydrolysing class D β-lactamase from Enterobacteriaceae.
International Journal of Antimicrobial Agents 2013, 41, 325-329.

Clermont O, Glodt J, Burdet C, Pognard D, Lefort A, Branger C, Denamur E, CGM
Complexity of Escherichia coli bacteremia pathophysiology evidenced by comparison of isolates from blood and portal of entry within single patients.
International journal of medical microbiology: IJMM 2013, 303, 529-532.

Rivière S, Lortholary O, Michon J, Bougnoux ME, Mainardi JL, Sendid B, Bretagne S, Lefort A
Aspergillus endocarditis in the era of new antifungals: major role for antigen detection.
The Journal of Infection 2013, 67, 85-88.

Aidara-Kane A, Andremont A, Collignon P
Antimicrobial resistance in the food chain and the AGISAR initiative.
Journal of Infection and Public Health 2013, 6, 162-165.

Cohen JF, Cohen R, Bidet P, Levy C, Deberdt P, d'Humières C, Liguori S, Corrard F, Thollot F, Mariani-Kurkdjian P, Chalumeau M, Bingen E
Rapid-antigen detection tests for group a streptococcal pharyngitis: revisiting false-positive results using polymerase chain reaction testing.
The Journal of Pediatrics 2013, 162, 1282-1284, 1284.e1.

Lefort A
[Why should antibiotic therapy be avoided in case of acute infectious diarrhea?].
Presse Médicale (Paris, France: 1983) 2013, 42, 82-83.

Picard B
[When should request a stool culture?].
Presse Médicale (Paris, France: 1983) 2013, 42, 66-67.

Jolly D, Lorette G, Ambrosi P, Dreyfuss D, Chaffanjon P, Le Jeunne C, Obert L, Rogez JM
[Results of the 2012 national ranking in France].
Presse Médicale (Paris, France: 1983) 2013, 42, 1138-1140.

Gavazzi G, Delerce E, Cambau E, François P, Corroyer B, de Wazières B, Fougère B, Paccalin M, Gaillat J
Diagnostic criteria for urinary tract infection in hospitalized elderly patients over 75 years of age: a multicenter cross-sectional study.
Médecine Et Maladies Infectieuses 2013, 43, 189-194.

Mattioni S, Develoux M, Brun S, Martin A, Jaureguy F, Naggara N, Bouchaud O
Management of mycetomas in France.
Médecine Et Maladies Infectieuses 2013, 43, 286-294.

Defrance G, Birgand G, Ruppé E, Billard M, Ruimy R, Bonnal C, Andremont A, Armand-Lefèvre L
Time-to-positivity-based discrimination between Enterobacteriaceae, Pseudomonas aeruginosa and strictly anaerobic Gram-negative bacilli in aerobic and anaerobic blood culture vials.
Journal of Microbiological Methods 2013, 93, 77-79.

Nebbad-Lechani B, Emirian A, Maillebuau F, Mahjoub N, Fihman V, Legrand P, Decousser JW
New procedure to reduce the time and cost of broncho-pulmonary specimen management using the Previ Isola® automated inoculation system.
Journal of Microbiological Methods 2013, 95, 384-388.

Lorrot M, Haas H, Hentgen V, Van Den Abbeele T, Bonacorsi S, Doit C, Cohen R, Grimprel E
[Antibiotherapy of severe ENT infections in children: peripharyngeal abscesses].
Archives De Pédiatrie: Organe Officiel De La Sociéte Française De Pédiatrie 2013, 20 Suppl 3, e1-4.

Andremont A, Lucet JC
Extensively resistant VIM-2-positive Pseudomonas aeruginosa.
The Lancet. Infectious Diseases 2013, 13, 828-829.

Kluytmans J, Price L, Grayson L, Gottlieb T, Mehtar S, Andremont A, Wegener HC, Johnson J
Enterobacteria: Ban resistant strains from food chain.
Nature 2013, 501, 316.

Burkovics P, Sebesta M, Sisakova A, Plault N, Szukacsov V, Robert T, Pinter L, Marini V, Kolesar P, Haracska L, Gangloff S, Krejci L
Srs2 mediates PCNA-SUMO-dependent inhibition of DNA repair synthesis.
The EMBO journal 2013, 32, 742-755.

Jacquier H, Birgy A, Le Nagard H, Mechulam Y, Schmitt E, Glodt J, Bercot B, Petit E, Poulain J, Barnaud G, Gros PA, Tenaillon O
Capturing the mutational landscape of the beta-lactamase TEM-1.
Proceedings of the National Academy of Sciences of the United States of America 2013, 110, 13067–13072.

Skurnik D, Roux D, Cattoir V, Danilchanka O, Lu X, Yoder-Himes DR, Han K, Guillard T, Jiang D, Gaultier C, Guerin F, Aschard H, Leclercq R, Mekalanos JJ, Lory S, Pier GB
Enhanced in vivo fitness of carbapenem-resistant oprD mutants of Pseudomonas aeruginosa revealed through high-throughput sequencing.
Proceedings of the National Academy of Sciences of the United States of America 2013, 110, 20747-20752.

Cywes-Bentley C, Skurnik D, Zaidi T, Roux D, Deoliveira RB, Garrett WS, Lu X, O'Malley J, Kinzel K, Zaidi T, Rey A, Perrin C, Fichorova RN, Kayatani AKK, Maira-Litràn T, Gening ML, Tsvetkov YE, Nifantiev NE, Bakaletz LO, Pelton SI, Golenbock DT, Pier GB
Antibody to a conserved antigenic target is protective against diverse prokaryotic and eukaryotic pathogens.
Proceedings of the National Academy of Sciences of the United States of America 2013, 110, E2209-2218.

Lafeuille E, Decré D, Mahjoub-Messai F, Bidet P, Arlet G, Bingen E
OXA-48 carbapenemase-producing Klebsiella pneumoniae isolated from Libyan patients.
Microbial Drug Resistance (Larchmont, N.Y.) 2013, 19, 491-497.

Angebault C, Djossou F, Abélanet S, Permal E, Ben Soltana M, Diancourt L, Bouchier C, Woerther PL, Catzeflis F, Andremont A, d'Enfert C, Bougnoux ME
Candida albicans is not always the preferential yeast colonizing humans: a study in Wayampi Amerindians.
The Journal of Infectious Diseases 2013, 208, 1705-1716.

Potron A, Nordmann P, Rondinaud E, Jaureguy F, Poirel L
A mosaic transposon encoding OXA-48 and CTX-M-15: towards pan-resistance.
The Journal of Antimicrobial Chemotherapy 2013, 68, 476-477.

Pautas C, Sbidian E, Hicheri Y, Bastuji-Garin S, Bretagne S, Corbel C, Gregoire L, Maury S, Merabet L, Cordonnier C, Cambau E
A new workflow for the microbiological diagnosis of febrile neutropenia in patients with a central venous catheter.
The Journal of Antimicrobial Chemotherapy 2013, 68, 943-946.

Desroches M, Potier J, Laurent F, Bourrel AS, Doucet-Populaire F, Decousser JW, MSG
Prevalence of mupirocin resistance among invasive coagulase-negative staphylococci and methicillin-resistant Staphylococcus aureus (MRSA) in France: emergence of a mupirocin-resistant MRSA clone harbouring mupA.
The Journal of Antimicrobial Chemotherapy 2013, 68, 1714-1717.

Huttner B, Haustein T, Uçkay I, Renzi G, Stewardson A, Schaerrer D, Agostinho A, Andremont A, Schrenzel J, Pittet D, Harbarth S
Decolonization of intestinal carriage of extended-spectrum β-lactamase-producing Enterobacteriaceae with oral colistin and neomycin: a randomized, double-blind, placebo-controlled trial.
The Journal of Antimicrobial Chemotherapy 2013, 68, 2375-2382.

Gravey F, Galopin S, Grall N, Auzou M, Andremont A, Leclercq R, Cattoir V
Lincosamide resistance mediated by lnu(C) (L phenotype) in a Streptococcus anginosus clinical isolate.
The Journal of Antimicrobial Chemotherapy 2013, 68, 2464-2467.

Jacquier H, Marcadé G, Raffoux E, Dombret H, Woerther PL, Donay JL, Arlet G, Cambau E
In vivo selection of a complex mutant TEM (CMT) from an inhibitor-resistant TEM (IRT) during ceftazidime therapy.
The Journal of Antimicrobial Chemotherapy 2013, 68, 2792-2796.

Ricard JD, Salomon L, Boyer A, Thiery G, Meybeck A, Roy C, Pasquet B, Le Mière E, Dreyfuss D
Central or peripheral catheters for initial venous access of ICU patients: a randomized controlled trial.
Critical Care Medicine 2013, 41, 2108-2115.

Darbera L, Chenoune M, Lidouren F, Kohlhauer M, Adam C, Bruneval P, Ghaleh B, Dubois-Randé JL, Carli P, Vivien B, Ricard JD, Berdeaux A, Tissier R
Hypothermic liquid ventilation prevents early hemodynamic dysfunction and cardiovascular mortality after coronary artery occlusion complicated by cardiac arrest in rabbits.
Critical Care Medicine 2013, 41, e457-465.

Bidet P, Collin E, Basmaci R, Courroux C, Prisse V, Dufour V, Bingen E, Grimprel E, Bonacorsi S
Investigation of an outbreak of osteoarticular infections caused by Kingella kingae in a childcare center using molecular techniques.
The Pediatric Infectious Disease Journal 2013, 32, 558-560.

Versporten A, Sharland M, Bielicki J, Drapier N, Vankerckhoven V, Goossens H, APGM
The antibiotic resistance and prescribing in European Children project: a neonatal and pediatric antimicrobial web-based point prevalence survey in 73 hospitals worldwide.
The Pediatric Infectious Disease Journal 2013, 32, e242-253.

Lepainteur M, Desroches M, Bourrel AS, Aberrane S, Fihman V, L'Hériteau F, Razafimahefa H, Derouin V, Doucet-Populaire F, Decousser JW
Role of the central venous catheter in bloodstream infections caused by coagulase-negative staphylococci in very preterm neonates.
The Pediatric Infectious Disease Journal 2013, 32, 622-628.

Levy C, Bidet P, Bonacorsi S, Cohen R, BMSG
Group A streptococcal meningitis in children: French surveillance network from 2001 to 2012.
The Pediatric Infectious Disease Journal 2013, 32, 1041-1042.

Lemaître C, Angoulvant F, Gabor F, Makhoul J, Bonacorsi S, Naudin J, Alison M, Faye A, Bingen E, Lorrot M
Necrotizing pneumonia in children: report of 41 cases between 2006 and 2011 in a French tertiary care center.
The Pediatric Infectious Disease Journal 2013, 32, 1146-1149.

Barbier F, Andremont A, Wolff M, Bouadma L
Hospital-acquired pneumonia and ventilator-associated pneumonia: recent advances in epidemiology and management.
Current Opinion in Pulmonary Medicine 2013, 19, 216-228.

Rafat C, Klouche K, Ricard JD, Messika J, Roch A, Machado S, Sonneville R, Guisset O, Pujol W, Guérin C, Teboul JL, Mrozek N, Darmon M, Chemouni F, Schmidt M, Mercier E, Dreyfuss D, Gaudry S
Severe Measles Infection: The Spectrum of Disease in 36 Critically Ill Adult Patients.
Medicine 2013

Charpentier C, Visseaux B, Bénard A, Peytavin G, Damond F, Roy C, Taieb A, Chêne G, Matheron S, Brun-Vézinet F, Descamps D, ACH2C
Transmitted drug resistance in French HIV-2-infected patients.
AIDS (London, England) 2013, 27, 1671-1674.

Decroix V, Goudjil S, Kongolo G, Mammeri H
'Leptotrichia amnionii', a newly reported cause of early onset neonatal meningitis.
Journal of Medical Microbiology 2013, 62, 785-788.

Mougari F, Jacquier H, Berçot B, Hannouche D, Nizard R, Cambau E, Zadegan F
Prosthetic knee arthritis due to Granulicatella adiacens after dental treatment.
Journal of Medical Microbiology 2013, 62, 1624-1627.

Dahyot S, Broutin I, de Champs C, Guillon H, Mammeri H
Contribution of asparagine 346 residue to the carbapenemase activity of CMY-2 β-lactamase.
FEMS microbiology letters 2013, 345, 147-153.

Clermont O, Christenson JK, Denamur E, Gordon DM
The Clermont Escherichia coli phylo-typing method revisited: improvement of specificity and detection of new phylo-groups.
Environmental Microbiology Reports 2013, 5, 58-65.

Landraud L, Jauréguy F, Frapy E, Guigon G, Gouriou S, Carbonnelle E, Clermont O, Denamur E, Picard B, Lemichez E, Brisse S, Nassif X
Severity of Escherichia coli bacteraemia is independent of the intrinsic virulence of the strains assessed in a mouse model.
Clinical Microbiology and Infection: The Official Publication of the European Society of Clinical Microbiology and Infectious Diseases 2013, 19, 85-90.

Lescat M, Clermont O, Woerther PL, Glodt J, Dion S, Skurnik D, Djossou F, Dupont C, Perroz G, Picard B, Catzeflis F, Andremont A, Denamur E
Commensal Escherichia coli strains in Guiana reveal a high genetic diversity with host-dependant population structure.
Environmental Microbiology Reports 2013, 5, 49-57.

Grall N, Massias L, Nguyen TT, Sayah-Jeanne S, Ducrot N, Chachaty E, de Gunzburg J, Andremont A
Oral DAV131, a charcoal-based adsorbent, inhibits intestinal colonization by β-lactam-resistant Klebsiella pneumoniae in cefotaxime-treated mice.
Antimicrobial Agents and Chemotherapy 2013, 57, 5423-5425.

Ruppé E, Lixandru B, Cojocaru R, Büke C, Paramythiotou E, Angebault C, Visseaux C, Djuikoue I, Erdem E, Burduniuc O, El Mniai A, Marcel C, Perrier M, Kesteman T, Clermont O, Denamur E, Armand-Lefèvre L, Andremont A
Relative fecal abundance of extended-spectrum-β-lactamase-producing Escherichia coli strains and their occurrence in urinary tract infections in women.
Antimicrobial Agents and Chemotherapy 2013, 57, 4512-4517.

Guillard T, Cambau E, Chau F, Massias L, de Champs C, Fantin B
Ciprofloxacin treatment failure in a murine model of pyelonephritis due to an AAC(6')-Ib-cr-producing Escherichia coli strain susceptible to ciprofloxacin in vitro.
Antimicrobial Agents and Chemotherapy 2013, 57, 5830-5835.

Armand-Lefevre L, Angebault C, Barbier F, Hamelet E, Defrance G, Ruppe E, Bronchard R, Lepeule R, Lucet JC, El Mniai A, Wolff M, Montravers P, Plesiat P, Andremont A
Emergence of Imipenem-Resistant Gram-Negative Bacilli in Intestinal Flora of Intensive Care Patients.
Antimicrobial Agents and Chemotherapy 2013, 57, 1488-1495.

Berthe T, Ratajczak M, Clermont O, Denamur E, Petit F
Evidence for coexistence of distinct Escherichia coli populations in various aquatic environments and their survival in estuary water.
Applied and Environmental Microbiology 2013, 79, 4684-4693.

Smati M, Clermont O, Le Gal F, Schichmanoff O, Jauréguy F, Eddi A, Denamur E, Picard B, CG
Real-time PCR for quantitative analysis of human commensal Escherichia coli populations reveals a high frequency of subdominant phylogroups.
Applied and Environmental Microbiology 2013, 79, 5005-5012.

Augustin P, Alsalih G, Launey Y, Delbosc S, Louedec L, Ollivier V, Chau F, Montravers P, Duval X, Michel JB, Meilhac O
Predominant role of host proteases in myocardial damage associated with infectious endocarditis induced by Enterococcus faecalis in a rat model.
Infection and Immunity 2013, 81, 1721-1729.

Bleibtreu A, Gros PA, Laouénan C, Clermont O, Le Nagard H, Picard B, Tenaillon O, Denamur E
Fitness, stress resistance, and extraintestinal virulence in Escherichia coli.
Infection and Immunity 2013, 81, 2733–2742.

Belmekki M, Mammeri H, Hamdad F, Rousseau F, Canarelli B, Biendo M
Comparison of Xpert MRSA/SA Nasal and MRSA/SA ELITe MGB assays for detection of the mecA gene with susceptibility testing methods for determination of methicillin resistance in Staphylococcus aureus isolates.
Journal of Clinical Microbiology 2013, 51, 3183-3191.

Basmaci R, Ilharreborde B, Doit C, Presedo A, Lorrot M, Alison M, Mazda K, Bidet P, Bonacorsi S
Two atypical cases of Kingella kingae invasive infection with concomitant human rhinovirus infection.
Journal of Clinical Microbiology 2013, 51, 3137-3139.

Birgy A, Mariani-Kurkdjian P, Bidet P, Doit C, Genel N, Courroux C, Arlet G, Bingen E
Characterization of extended-spectrum-beta-lactamase-producing Escherichia coli strains involved in maternal-fetal colonization: prevalence of E. coli ST131.
Journal of Clinical Microbiology 2013, 51, 1727-1732.

Megraud F, Coenen S, Versporten A, Kist M, Lopez-Brea M, Hirschl AM, Andersen LP, Goossens H, Glupczynski Y, SGp
Helicobacter pylori resistance to antibiotics in Europe and its relationship to antibiotic consumption.
Gut 2013, 62, 34-42.

Dreyfuss D, Ricard JD, Gaudry S
Amphotericin B deoxycholate for candidiasis in intensive care unit patients revisited: medical, ethical, and financial implications.
American Journal of Respiratory and Critical Care Medicine 2013, 187, 661-663.

Radomski N, Roguet A, Lucas FS, Veyrier FJ, Cambau E, Accrombessi H, Moilleron R, Behr MA, Moulin L
atpE gene as a new useful specific molecular target to quantify Mycobacterium in environmental samples.
BMC microbiology 2013, 13, 277.

Gharbi M, Flegg JA, Hubert V, Kendjo E, Metcalf JE, Bertaux L, Guérin PJ, Le Bras J, MotFNRCfIMS, Aboubaca A, Agnamey P, Angoulvant A, Barbut P, Basset D, Belkadi G, Bellanger AP, Bemba D, Benoit-Vica F, Berry A, Bigel ML, Bonhomme J, Botterel F, Bouchaud O, Bougnoux ME, Bourée P, Bourgeois N, Branger C, Bret L, Buret B, Casalino E, Chevrier S, Conquere de Monbrison F, Cuisenier B, Danis M, Darde ML, De Gentile L, Delarbre JM, Delaunay P, Delaval A, Desoubeaux G, Develoux M, Dunand J, Durand R, Eloy O, Fauchet N, Faugere B, Faye A, Fenneteau O, Flori P, Fontrouge M, Garabedian C, Gayandrieu F, Godineau N, Houzé P, Houzé S, Hurst JP, Ichou H, Lachaud L, Lebuisson A, Lefevre M, LeGuern AS, Le Moal G, Lusina D, Machouart MC, Malvy D, Matheron S, Maubon D, Mechali D, Megarbane B, Menard G, Millon L, Aiach MM, Minodier P, Morelle C, Nevez G, Parola P, Parzy D, Patey O, Patoz P, Penn P, Perignon A, Picot S, Pilo JE, Poilane I, Pons D, Poupart M, Pradines B, Raffenot D, Rapp C, Receveur MC, Sarfati C, Senghor Y, Simon F, Siriez JY, Taudon N, Thellier M, Thouvenin M, Toubas D
Longitudinal study assessing the return of chloroquine susceptibility of Plasmodium falciparum in isolates from travellers returning from West and Central Africa, 2000-2011.
Malaria Journal 2013, 12, 35.

Gaillard T, Briolant S, Houzé S, Baragatti M, Wurtz N, Hubert V, Lavina M, Pascual A, Travaillé C, Le Bras J, Pradines B, FNRCfIMSG
PftetQ and pfmdt copy numbers as predictive molecular markers of decreased ex vivo doxycycline susceptibility in imported Plasmodium falciparum malaria.
Malaria Journal 2013, 12, 414.

Birgand G, Ruimy R, Schwarzinger M, Lolom I, Bendjelloul G, Houhou N, Armand-Lefevre L, Andremont A, Yazdanpanah Y, Lucet JC
Rapid detection of glycopeptide-resistant enterococci: impact on decision-making and costs.
Antimicrobial Resistance and Infection Control 2013, 2, 30.

Ait-Oufella H, Bourcier S, Alves M, Galbois A, Baudel JL, Margetis D, Bige N, Offenstadt G, Maury E, Guidet B
Alteration of skin perfusion in mottling area during septic shock.
Annals of Intensive Care 2013, 3, 31.

Claessens YE, Aegerter P, Boubaker H, Guidet B, Cariou A, CRN
Are clinical trials dealing with severe infection fitting routine practices? Insights from a large registry.
Critical Care (London, England) 2013, 17, R89.

Cornely OA, Miller MA, Fantin B, Mullane K, Kean Y, Gorbach S
Resolution of Clostridium difficile-associated diarrhea in patients with cancer treated with fidaxomicin or vancomycin.
Journal of Clinical Oncology: Official Journal of the American Society of Clinical Oncology 2013, 31, 2493-2499.

Abgrall S, Le Bel J, Lele N, Laouénan C, Eychenne N, Mentré F, Peytavin G, Bouchaud O, VSG
Lack of effect of doxycycline on trough concentrations of protease inhibitors or non-nucleoside reverse transcriptase inhibitors in HIV-infected patients.
HIV clinical trials 2013, 14, 313-318.

Lloret-Linares C, Mouly S, Hoang-Nguyen DT, Evans J, Raskine L, Lopes A, Cambau E, Bergmann JF, Sellier P
Inadequate therapeutic response to a recommended antituberculosis fixed-dose combination regimen in an overweight patient with Mycobacterium bovis infection.
The Annals of Pharmacotherapy 2013, 47, e4.

Krastinova E, Seng R, Yeni P, Viard JP, Vittecoq D, Lascoux-Combe C, Fourn E, Pahlavan G, Delfraissy JF, Meyer L, APaCC
Is clinical practice concordant with the changes in guidelines for antiretroviral therapy initiation during primary and chronic HIV-1 infection? The ANRS PRIMO and COPANA cohorts.
PloS One 2013, 8, e71473.

Lemaître C, Mahjoub-Messai F, Dupont D, Caro V, Diancourt L, Bingen E, Bidet P, Bonacorsi S
A conserved virulence plasmidic region contributes to the virulence of the multiresistant Escherichia coli meningitis strain S286 belonging to phylogenetic group C.
PloS One 2013, 8, e74423.

Legeai C, Vigouroux C, Souberbielle JC, Bouchaud O, Boufassa F, Bastard JP, Carlier R, Capeau J, Goujard C, Meyer L, Viard JP, ACCSG
Associations between 25-hydroxyvitamin D and immunologic, metabolic, inflammatory markers in treatment-naive HIV-infected persons: the ANRS CO9 «COPANA» cohort study.
PloS One 2013, 8, e74868.

Skurnik D, Roux D, Aschard H, Cattoir V, Yoder-Himes D, Lory S, Pier GB
A comprehensive analysis of in vitro and in vivo genetic fitness of Pseudomonas aeruginosa using high-throughput sequencing of transposon libraries.
PLoS pathogens 2013, 9, e1003582.

Rafat C, Fihman V, Ricard JD
A 51-year-old man presenting with shock and lower-lobe consolidation with interlobar bulging fissure.
Chest 2013, 143, 1167-1169.

Ruppé E, Andremont A
Causes, consequences, and perspectives in the variations of intestinal density of colonization of multidrug-resistant enterobacteria.
Frontiers in Microbiology 2013, 4, 129.

Ricard JD
The authors respond to: High-flow nasal cannula oxygen therapy in the emergency department: welcome, but selection should be the first step.
Respiratory Care 2013, 58, e67-68.

Bernard C, Brossier F, Sougakoff W, Veziris N, Frechet-Jachym M, Metivier N, Renvoisé A, Robert J, Jarlier V, MTMgotN
A surge of MDR and XDR tuberculosis in France among patients born in the Former Soviet Union.
Euro Surveillance: Bulletin Européen Sur Les Maladies Transmissibles = European Communicable Disease Bulletin 2013, 18, 20555.

 2012                                                                            

Karch H, Denamur E, Dobrindt U, Finlay BB, Hengge R, Johannes L, Ron EZ, Tønjum T, Sansonetti PJ, Vicente M
The enemy within us: lessons from the 2011 European Escherichia coli O104:H4 outbreak.
EMBO molecular medicine 2012, 4, 841-848.

Pariente B, Pineton de Chambrun G, Krzysiek R, Desroches M, Louis G, De Cassan C, Baudry C, Gornet JM, Desreumaux P, Emilie D, Colombel JF, Allez M
Trough levels and antibodies to infliximab may not predict response to intensification of infliximab therapy in patients with inflammatory bowel disease.
Inflammatory Bowel Diseases 2012, 18, 1199-1206.

Ait-Oufella H, Joffre J, Boelle PY, Galbois A, Bourcier S, Baudel JL, Margetis D, Alves M, Offenstadt G, Guidet B, Maury E
Knee area tissue oxygen saturation is predictive of 14-day mortality in septic shock.
Intensive Care Medicine 2012, 38, 976-983.

Dufour N, Delville M, Teboul JL, Camous L, Favier du Noyer A, Richard C, Monnet X
Transpulmonary thermodilution measurements are not affected by continuous veno-venous hemofiltration at high blood pump flow.
Intensive Care Medicine 2012, 38, 1162-1168.

Ricard JD, Roux D
Candida colonization in ventilated ICU patients: no longer a bystander!.
Intensive Care Medicine 2012, 38, 1243-1245.

Lakhal K, Serveaux-Delous M, Lefrant JY, Capdevila X, Jaber S, AnftRsg
Chest radiographs in 104 French ICUs: current prescription strategies and clinical value (the RadioDay study).
Intensive Care Medicine 2012, 38, 1787-1799.

Messika J, Magdoud F, Clermont O, Margetis D, Gaudry S, Roux D, Branger C, Dreyfuss D, Denamur E, Ricard JD
Pathophysiology of Escherichia coli ventilator-associated pneumonia: implication of highly virulent extraintestinal pathogenic strains.
Intensive Care Medicine 2012, 38, 2007-2016.

Bargui F, D'Agostino I, Mariani-Kurkdjian P, Alberti C, Doit C, Bellier N, Morin L, Galli Gibertini G, Smail A, Zanin A, Lorrot M, Dauger S, Neve M, Faye A, Armoogum P, Bourrillon A, Bingen E, Mercier JC, Bonacorsi S, Nigrovic LE, Titomanlio L
Factors influencing neurological outcome of children with bacterial meningitis at the emergency department.
European Journal of Pediatrics 2012, 171, 1365-1371.

Ruppe E, Pitsch A, Tubach F, de Lastours V, Chau F, Pasquet B, Lucet JC, Andremont A, Fantin B
Clinical predictive values of extended-spectrum beta-lactamase carriage in patients admitted to medical wards.
European Journal of Clinical Microbiology & Infectious Diseases 2012, 31, 319-325.

Angoulvant F, Skurnik D, Bellanger H, Abdoul H, Bellettre X, Morin L, Aptecar M, Galli-Gibertini G, Bourdon O, Doit C, Faye A, Mercier JC, Cohen R, Alberti C
Impact of implementing French antibiotic guidelines for acute respiratory-tract infections in a paediatric emergency department, 2005-2009.
European Journal of Clinical Microbiology & Infectious Diseases: Official Publication of the European Society of Clinical Microbiology 2012, 31, 1295-1303.

Diamantis S, Rioux C, Bonnal C, Farfour É, Papy E, Andremont A, Yeni P, Bouvet É, Lucet JC
Suitability of initial antibiotic therapy for the treatment of bloodstream infections and the potential role of antibiotic management teams in improving it.
European Journal of Clinical Microbiology & Infectious Diseases: Official Publication of the European Society of Clinical Microbiology 2012, 31, 1667-1671.

Lemaître C, Ferroni A, Doit C, Vu-Thien H, Glorion C, Raymond J, Mary P, Wicart P, Bingen E, Ilharreborde B, Lorrot M
Pediatric osteoarticular infections caused by Streptococcus pneumoniae before and after the introduction of the heptavalent pneumococcal conjugate vaccine.
European Journal of Clinical Microbiology & Infectious Diseases: Official Publication of the European Society of Clinical Microbiology 2012, 31, 2773-2781.

Bidet P, Liguori S, Plainvert C, Bonacorsi S, Courroux C, d'Humières C, Poyart C, Efstratiou A, Bingen E
Identification of group A streptococcal emm types commonly associated with invasive infections and antimicrobial resistance by the use of multiplex PCR and high-resolution melting analysis.
European Journal of Clinical Microbiology & Infectious Diseases: Official Publication of the European Society of Clinical Microbiology 2012, 31, 2817-2826.

Guyot K, Biran V, Doit C, Moissenet D, Guillard T, Brasme L, Courroux C, Maquelin K, van Leeuwen W, Vuthien H, Aujard Y, De Champs C, Bingen E
Raman spectroscopic analysis of the clonal and horizontal spread of CTX-M-15-producing Klebsiella pneumoniae in a neonatal intensive care unit.
European Journal of Clinical Microbiology & Infectious Diseases: Official Publication of the European Society of Clinical Microbiology 2012, 31, 2827-2834.

Mellon G, Clec'h C, Picard B, Cohen Y, Jauréguy F
Postsurgical meningitis due to multiresistant Acinetobacter baumannii successfully treated with high doses of ampicillin/sulbactam combined with rifampicin and fosfomycin.
Journal of Infection and Chemotherapy: Official Journal of the Japan Society of Chemotherapy 2012, 18, 958-960.

Pallier K, Cazes A, El Khattabi L, Lecchi C, Desroches M, Danel C, Riquet M, Fabre-Guillevin E, Laurent-Puig P, Blons H
DeltaN TP63 reactivation, epithelial phenotype maintenance, and survival in lung squamous cell carcinoma.
Tumour Biology: The Journal of the International Society for Oncodevelopmental Biology and Medicine 2012, 33, 41-51.

Mekinian A, Stirnemann J, Belmatoug N, Heraoui D, Fantin B, Fain O, Charpentier A, Rose C
Ferritinemia during type 1 Gaucher disease: mechanisms and progression under treatment.
Blood Cells, Molecules & Diseases 2012, 49, 53-57.

Meinzer U, Barreau F, Esmiol-Welterlin S, Jung C, Villard C, Léger T, Ben-Mkaddem S, Berrebi D, Dussaillant M, Alnabhani Z, Roy M, Bonacorsi S, Wolf-Watz H, Perroy J, Ollendorff V, Hugot JP
Yersinia pseudotuberculosis effector YopJ subverts the Nod2/RICK/TAK1 pathway and activates caspase-1 to induce intestinal barrier dysfunction.
Cell Host & Microbe 2012, 11, 337-351.

d'Humières C, Cohen R, Levy C, Bidet P, Thollot F, Wollner A, Bingen E
Decline in macrolide-resistant Streptococcus pyogenes isolates from French children.
International journal of medical microbiology: IJMM 2012, 302, 300-303.

Duval X, Delahaye F, Alla F, Tattevin P, Obadia JF, Le Moing V, Doco-Lecompte T, Celard M, Poyart C, Strady C, Chirouze C, Bes M, Cambau E, Iung B, Selton-Suty C, Hoen B, ASG
Temporal trends in infective endocarditis in the context of prophylaxis guideline modifications: three successive population-based surveys.
Journal of the American College of Cardiology 2012, 59, 1968-1976.

Sztrymf B, Messika J, Mayot T, Lenglet H, Dreyfuss D, Ricard JD
Impact of high-flow nasal cannula oxygen therapy on intensive care unit patients with acute respiratory failure: a prospective observational study.
Journal of Critical Care 2012, 27, 324.e9-13.

Pang KAP, Godet C, Fekkar A, Scholler J, Nivoix Y, Letscher-Bru V, Massias L, Kauffmann-Lacroix C, Elsendoorn A, Uzunov M, Datry A, Herbrecht R
Breakthrough invasive mould infections in patients treated with caspofungin.
The Journal of Infection 2012, 64, 424-429.

Fihman V, Le Monnier A, Corvec S, Jaureguy F, Tankovic J, Jacquier H, Carbonnelle E, Bille E, Illiaquer M, Cattoir V, Zahar JR
Stenotrophomonas maltophilia--the most worrisome threat among unusual non-fermentative gram-negative bacilli from hospitalized patients: a prospective multicenter study.
The Journal of Infection 2012, 64, 391-398.

Ricard JD, Conti G, Boucherie M, Hormann C, Poelaert J, Quintel M, Rubertsson S, Torres A
A European survey of nosocomial infection control and hospital-acquired pneumonia prevention practices.
The Journal of Infection 2012, 65, 285-291.

Jolly D, Lorette G, Ambrosi P, Dreyfuss D, Chaffanjon P, Kohler C, Duhaut P, Rogez JM
[Results of the 2011 national ranking in France].
Presse Médicale (Paris, France: 1983) 2012, 41, 323-325.

Lebeaux D, Zarrouk V, Petrover D, Nicolas-Chanoine MH, Fantin B
Salmonella Colindale osteomyelitis in an immunocompetent female patient.
Medecine Et Maladies Infectieuses 2012, 42, 36-37.

Viala C, Le Monnier A, Maataoui N, Rousseau C, Collignon A, Poilane I
Comparison of commercial molecular assays for toxigenic Clostridium difficile detection in stools: BD GeneOhm Cdiff, XPert C. difficile and illumigene C. difficile.
Journal of Microbiological Methods 2012, 90, 83-85.

Galvan L, Lepejová N, Gaillard MC, Malgorn C, Guillermier M, Houitte D, Bonvento G, Petit F, Dufour N, Héry P, Gérard M, Elalouf JM, Déglon N, Brouillet E, de Chaldée M
Capucin does not modify the toxicity of a mutant Huntingtin fragment in vivo.
Neurobiology of Aging 2012, 33, 1845.e5-6.

Froissart A, Gazaignes S, Gellen-Dautremer J, Leflon-Guibout V, Iakovlev G, Zarrouk V, Lefort A, Fantin B
[Intermittent prolonged fever triggered by efforts].
La Revue De Médecine Interne / Fondée ... Par La Société Nationale Francaise De Médecine Interne 2012, 33, 519-521.

Zeidan S, El Ghoneimi A, Peuchmaur M, Bingen E, Bonacorsi S
Effect of partial ureteral obstruction and bacterial virulence on the occurrence of renal scarring in a mouse model.
Urology 2012, 80, 486.e1-7.

Bidet P, Bonarcorsi S, Bingen E
[Virulence factors and pathophysiology of extraintestinal pathogenic Escherichia coli].
Archives De Pédiatrie: Organe Officiel De La Sociéte Française De Pédiatrie 2012, 19 Suppl 3, S80-92.

Mariani-Kurkdjian P, Doit C, Bingen E
[Extended-spectrum beta-lactamase producing-enterobacteriaceae].
Archives De Pédiatrie: Organe Officiel De La Sociéte Française De Pédiatrie 2012, 19 Suppl 3, S93-96.

Labie D, Denamur E
[Genetic adaptation of bacteria].
Médecine Sciences: M/S 2012, 28, 588-590.

Galbois A, Stenard F, Margetis D
A ghost pancreas.
Gastroenterology 2012, 142, 211, 412.

Desmard M, Foresti R, Morin D, Dagouassat M, Dagoussat M, Berdeaux A, Denamur E, Crook SH, Mann BE, Scapens D, Montravers P, Boczkowski J, Motterlini R
Differential antibacterial activity against Pseudomonas aeruginosa by carbon monoxide-releasing molecules.
Antioxidants & Redox Signaling 2012, 16, 153-163.

Jacquier H, Le Monnier A, Carbonnelle E, Corvec S, Illiaquer M, Bille E, Zahar JR, Jauréguy F, Fihman V, Tankovic J, Cattoir V, GSG
In vitro antimicrobial activity of "last-resort" antibiotics against unusual nonfermenting Gram-negative bacilli clinical isolates.
Microbial Drug Resistance (Larchmont, N.Y.) 2012, 18, 396-401.

Selton-Suty C, Célard M, Le Moing V, Doco-Lecompte T, Chirouze C, Iung B, Strady C, Revest M, Vandenesch F, Bouvet A, Delahaye F, Alla F, Duval X, Hoen B, ASG
Preeminence of Staphylococcus aureus in infective endocarditis: a 1-year population-based survey.
Clinical Infectious Diseases: An Official Publication of the Infectious Diseases Society of America 2012, 54, 1230-1239.

Amit U, Porat N, Basmaci R, Bidet P, Bonacorsi S, Dagan R, Yagupsky P
Genotyping of invasive Kingella kingae isolates reveals predominant clones and association with specific clinical syndromes.
Clinical Infectious Diseases: An Official Publication of the Infectious Diseases Society of America 2012, 55, 1074-1079.

Skurnik D, Kropec A, Roux D, Theilacker C, Huebner J, Pier GB
Natural antibodies in normal human serum inhibit Staphylococcus aureus capsular polysaccharide vaccine efficacy.
Clinical Infectious Diseases: An Official Publication of the Infectious Diseases Society of America 2012, 55, 1188-1197.

Dubée V, Lenoir T, Leflon-Guibout V, Briere-Bellier C, Guigui P, Fantin B
Three-month antibiotic therapy for early-onset postoperative spinal implant infections.
Clinical Infectious Diseases: An Official Publication of the Infectious Diseases Society of America 2012, 55, 1481-1487.

Genin A, Desir J, Lambert N, Biervliet M, Van Der Aa N, Pierquin G, Killian A, Tosi M, Urbina M, Lefort A, Libert F, Pirson I, Abramowicz M
Kinetochore KMN network gene CASC5 mutated in primary microcephaly.
Human Molecular Genetics 2012, 21, 5306-5317.

Skurnik D, Davis MR, Benedetti D, Moravec KL, Cywes-Bentley C, Roux D, Traficante DC, Walsh RL, Maira-Litràn T, Cassidy SK, Hermos CR, Martin TR, Thakkallapalli EL, Vargas SO, McAdam AJ, Lieberman TD, Kishony R, Lipuma JJ, Pier GB, Goldberg JB, Priebe GP
Targeting pan-resistant bacteria with antibodies to a broadly conserved surface polysaccharide expressed during infection.
The Journal of Infectious Diseases 2012, 205, 1709-1718.

Maruri F, Sterling TR, Kaiga AW, Blackman A, van der Heijden YF, Mayer C, Cambau E, Aubry A
A systematic review of gyrase mutations associated with fluoroquinolone-resistant Mycobacterium tuberculosis and a proposed gyrase numbering system.
The Journal of Antimicrobial Chemotherapy 2012, 67, 819-831.

Nessar R, Cambau E, Reyrat JM, Murray A, Gicquel B
Mycobacterium abscessus: a new antibiotic nightmare.
The Journal of Antimicrobial Chemotherapy 2012, 67, 810-818.

Thiébaut ACM, Arlet G, Andremont A, Papy E, Sollet JP, Bernède-Bauduin C, Guillemot D, Schlemmer B, CSG
Variability of intestinal colonization with third-generation cephalosporin-resistant Enterobacteriaceae and antibiotic use in intensive care units.
The Journal of Antimicrobial Chemotherapy 2012, 67, 1525-1536.

Guillard T, de Champs C, Moret H, Bertrand X, Scheftel JM, Cambau E
High-resolution melting analysis for rapid characterization of qnr alleles in clinical isolates and detection of two novel alleles, qnrB25 and qnrB42.
The Journal of Antimicrobial Chemotherapy 2012, 67, 2635-2639.

Roux D, Pier GB, Skurnik D
Magic bullets for the 21st century: the reemergence of immunotherapy for multi- and pan-resistant microbes.
The Journal of Antimicrobial Chemotherapy 2012, 67, 2785-2787.

Heming N, Lettéron P, Driss F, Millot S, El Benna J, Tourret J, Denamur E, Montravers P, Beaumont C, Lasocki S
Efficacy and toxicity of intravenous iron in a mouse model of critical care anemia*.
Critical Care Medicine 2012, 40, 2141-2148.

François B, Luyt CE, Dugard A, Wolff M, Diehl JL, Jaber S, Forel JM, Garot D, Kipnis E, Mebazaa A, Misset B, Andremont A, Ploy MC, Jacobs A, Yarranton G, Pearce T, Fagon JY, Chastre J
Safety and pharmacokinetics of an anti-PcrV PEGylated monoclonal antibody fragment in mechanically ventilated patients colonized with Pseudomonas aeruginosa: a randomized,double-blind, placebo-controlled trial.
Critical Care Medicine 2012, 40, 2320-2326.

Couloigner V, Levy C, François M, Bidet P, Hausdorff WP, Pascal T, Boucherat M, Bingen E, Mariani P, Pierrot S, Bille E, Carbonnelle E, Varon E, Cohen R
Pathogens implicated in acute otitis media failures after 7-valent pneumococcal conjugate vaccine implementation in France: distribution, serotypes, and resistance levels.
The Pediatric Infectious Disease Journal 2012, 31, 154-158.

Chauny JV, Lorrot M, Prot-Labarthe S, De Lauzanne A, Doit C, Géréral T, Bourdon O
Treatment of tuberculosis with levofloxacin or moxifloxacin: report of 6 pediatric cases.
The Pediatric Infectious Disease Journal 2012, 31, 1309-1311.

Ricard JD
New therapies for pneumonia.
Current Opinion in Pulmonary Medicine 2012, 18, 181-186.

Lebeaux D, Larroque B, Gellen-Dautremer J, Leflon-Guibout V, Dreyer C, Bialek S, Froissart A, Hentic O, Tessier C, Ruimy R, Pelletier AL, Crestani B, Fournier M, Papo T, Barry B, Zarrouk V, Fantin B
Clinical outcome after a totally implantable venous access port-related infection in cancer patients: a prospective study and review of the literature.
Medicine 2012, 91, 309-318.

Dray-Spira R, Legeai C, Le Den M, Boué F, Lascoux-Combe C, Simon A, May T, Goujard C, Meyer L, ACCSG
Burden of HIV disease and comorbidities on the chances of maintaining employment in the era of sustained combined antiretoviral therapies use.
AIDS (London, England) 2012, 26, 207-215.

d'Humières C, Birgy A, Doit C, Bidet P, Arlet G, Bingen E
Use of a new screening medium to detect carbapenem-non-susceptible members of the Enterobacteriaceae.
Journal of Medical Microbiology 2012, 61, 878-880.

Touchon M, Charpentier S, Pognard D, Picard B, Arlet G, Rocha EPC, Denamur E, Branger C
Antibiotic resistance plasmids spread among natural isolates of Escherichia coli in spite of CRISPR elements.
Microbiology (Reading, England) 2012, 158, 2997-3004.

Galbois A, Zorzi L, Meurisse S, Kernéis S, Margetis D, Alves M, Ait-Oufella H, Baudel JL, Offenstadt G, Maury E, Guidet B
Outcome of spontaneous and iatrogenic pneumothoraces managed with small-bore chest tubes.
Acta Anaesthesiologica Scandinavica 2012, 56, 507-512.

Bille E, Dauphin B, Leto J, Bougnoux ME, Beretti JL, Lotz A, Suarez S, Meyer J, Join-Lambert O, Descamps P, Grall N, Mory F, Dubreuil L, Berche P, Nassif X, Ferroni A
MALDI-TOF MS Andromas strategy for the routine identification of bacteria, mycobacteria, yeasts, Aspergillus spp. and positive blood cultures.
Clinical Microbiology and Infection: The Official Publication of the European Society of Clinical Microbiology and Infectious Diseases 2012, 18, 1117-1125.

Lefort A, Chartier L, Sendid B, Wolff M, Mainardi JL, Podglajen I, Desnos-Ollivier M, Fontanet A, Bretagne S, Lortholary O, FMSG
Diagnosis, management and outcome of Candida endocarditis.
Clinical Microbiology and Infection: The Official Publication of the European Society of Clinical Microbiology and Infectious Diseases 2012, 18, E99-E109.

Basmaci R, Ilharreborde B, Bidet P, Doit C, Lorrot M, Mazda K, Bingen E, Bonacorsi S
Isolation of Kingella kingae in the oropharynx during K. kingae arthritis in children.
Clinical Microbiology and Infection: The Official Publication of the European Society of Clinical Microbiology and Infectious Diseases 2012, 18, E134-136.

Fournier S, Lepainteur M, Kassis-Chikhani N, Huang M, Brun-Buisson C, Jarlier V, AHOCG
Link between carbapenemase-producing Enterobacteria carriage and cross-border exchanges: eight-year surveillance in a large French multihospitals institution.
Journal of Travel Medicine 2012, 19, 320-323.

Guillard T, Cambau E, Neuwirth C, Nenninger T, Mbadi A, Brasme L, Vernet-Garnier V, Bajolet O, de Champs C
Description of a 2,683-base-pair plasmid containing qnrD in two Providencia rettgeri isolates.
Antimicrobial Agents and Chemotherapy 2012, 56, 565-568.

Lebeaux D, Barbier F, Angebault C, Benmahdi L, Ruppé E, Felix B, Gaillard K, Djossou F, Epelboin L, Dupont C, Renard M, Peroz G, Vandenesch F, Wolff M, Andremont A, Ruimy R
Evolution of nasal carriage of methicillin-resistant coagulase-negative staphylococci in a remote population.
Antimicrobial Agents and Chemotherapy 2012, 56, 315-323.

Saleh-Mghir A, Dumitrescu O, Dinh A, Boutrad Y, Massias L, Martin E, Vandenesch F, Etienne J, Lina G, Crémieux AC
Ceftobiprole efficacy in vitro against Panton-Valentine leukocidin production and in vivo against community-associated methicillin-resistant Staphylococcus aureus osteomyelitis in rabbits.
Antimicrobial Agents and Chemotherapy 2012, 56, 6291-6297.

Dahyot S, Mammeri H
Hydrolysis spectrum extension of CMY-2-like β-lactamases resulting from structural alteration in the Y-X-N loop.
Antimicrobial Agents and Chemotherapy 2012, 56, 1151-1156.

Lepeule R, Ruppé E, Le P, Massias L, Chau F, Nucci A, Lefort A, Fantin B
Cefoxitin as an alternative to carbapenems in a murine model of urinary tract infection due to Escherichia coli harboring CTX-M-15-type extended-spectrum β-lactamase.
Antimicrobial Agents and Chemotherapy 2012, 56, 1376-1381.

Pouillot F, Chomton M, Blois H, Courroux C, Noelig J, Bidet P, Bingen E, Bonacorsi S
Efficacy of bacteriophage therapy in experimental sepsis and meningitis caused by a clone O25b:H4-ST131 Escherichia coli strain producing CTX-M-15.
Antimicrobial Agents and Chemotherapy 2012, 56, 3568-3575.

Bercot B, Nordmann P, Drancourt M, Poirel L
Chromosome-encoded extended-spectrum class A β-lactamase MIN-1 from Minibacterium massiliensis.
Antimicrobial Agents and Chemotherapy 2012, 56, 4009-4012.

Nguyen TT, Chachaty E, Huy C, Cambier C, de Gunzburg J, Mentré F, Andremont A
Correlation between fecal concentrations of ciprofloxacin and fecal counts of resistant Enterobacteriaceae in piglets treated with ciprofloxacin: toward new means to control the spread of resistance?.
Antimicrobial Agents and Chemotherapy 2012, 56, 4973-4975.

Johnson JR, Porter SB, Zhanel G, Kuskowski MA, Denamur E
Virulence of Escherichia coli clinical isolates in a murine sepsis model in relation to sequence type ST131 status, fluoroquinolone resistance, and virulence genotype.
Infection and Immunity 2012, 80, 1554-1562.

Bingen E, Bidet P, Birgy A, Sobral E, Mariani P, Cohen R
In vitro interaction between cefixime and amoxicillin-clavulanate against extended-spectrum-beta-lactamase-producing Escherichia coli causing urinary tract infection.
Journal of Clinical Microbiology 2012, 50, 2540-2541.

Brisse S, Diancourt L, Laouénan C, Vigan M, Caro V, Arlet G, Drieux L, Leflon-Guibout V, Mentré F, Jarlier V, Nicolas-Chanoine MH, CβSG
Phylogenetic distribution of CTX-M- and non-extended-spectrum-β-lactamase-producing Escherichia coli isolates: group B2 isolates, except clone ST131, rarely produce CTX-M enzymes.
Journal of Clinical Microbiology 2012, 50, 2974–2981.

Broutin V, Bañuls AL, Aubry A, Keck N, Choisy M, Bernardet JF, Michel C, Raymond JC, Libert C, Barnaud A, Stragier P, Portaels F, Terru D, Belon C, Dereure O, Gutierrez C, Boschiroli ML, Van De Perre P, Cambau E, Godreuil S
Genetic diversity and population structure of Mycobacterium marinum: new insights into host and environmental specificities.
Journal of Clinical Microbiology 2012, 50, 3627-3634.

Birgy A, Bidet P, Genel N, Doit C, Decré D, Arlet G, Bingen E
Phenotypic screening of carbapenemases and associated β-lactamases in carbapenem-resistant Enterobacteriaceae.
Journal of Clinical Microbiology 2012, 50, 1295-1302.

Lemaître C, Bidet P, Bingen E, Bonacorsi S
Transcriptional analysis of the Escherichia coli ColV-Ia plasmid pS88 during growth in human serum and urine.
BMC microbiology 2012, 12, 115.

Aubron C, Glodt J, Matar C, Huet O, Borderie D, Dobrindt U, Duranteau J, Denamur E, Conti M, Bouvet O
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BMC microbiology 2012, 12, 120.

Birgy A, Cohen R, Levy C, Bidet P, Courroux C, Benani M, Thollot F, Bingen E
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BMC infectious diseases 2012, 12, 315.

Aubron C, Huet O, Ricome S, Borderie D, Pussard E, Leblanc PE, Bouvet O, Vicaut E, Denamur E, Duranteau J
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Stirnemann J, Vigan M, Hamroun D, Heraoui D, Rossi-Semerano L, Berger MG, Rose C, Camou F, de Roux-Serratrice C, Grosbois B, Kaminsky P, Robert A, Caillaud C, Froissart R, Levade T, Masseau A, Mignot C, Sedel F, Dobbelaere D, Vanier MT, Valayanopoulos V, Fain O, Fantin B, de Villemeur TB, Mentré F, Belmatoug N
The French Gaucher's disease registry: clinical characteristics, complications and treatment of 562 patients.
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Hayden JA, Cartwright JL, Riley RD, Vantulder MW, CLBPIMAG
Exercise therapy for chronic low back pain: protocol for an individual participant data meta-analysis.
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Ait-Oufella H, Boelle PY, Galbois A, Baudel JL, Margetis D, Alves M, Offenstadt G, Maury E, Guidet B
Comparison of superior vena cava and femoroiliac vein pressure according to intra-abdominal pressure.
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Graftieaux JP, Bollaert PE, Haddad L, Kentish-Barnes N, Nitenberg G, Robert R, Villers D, Dreyfuss D
Contribution of the ethics committee of the French Intensive Care Society to describing a scenario for implementing organ donation after Maastricht type III cardiocirculatory death in France.
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Sonneville R, Schmidt M, Messika J, Ait Hssain A, da Silva D, Klein IF, Bouadma L, Wolff M, Mourvillier B
Neurologic outcomes and adjunctive steroids in HIV patients with severe cerebral toxoplasmosis.
Neurology 2012, 79, 1762-1766.

Cambau E, Chauffour-Nevejans A, Tejmar-Kolar L, Matsuoka M, Jarlier V
Detection of antibiotic resistance in leprosy using GenoType LepraeDR, a novel ready-to-use molecular test.
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Nicolas-Chanoine MH, Jarlier V, Robert J, Arlet G, Drieux L, Leflon-Guibout V, Laouénan C, Larroque B, Caro V, Mentré F, GCβ
Patient's origin and lifestyle associated with CTX-M-producing Escherichia coli: a case-control-control study.
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Basmaci R, Yagupsky P, Ilharreborde B, Guyot K, Porat N, Chomton M, Thiberge JM, Mazda K, Bingen E, Bonacorsi S, Bidet P
Multilocus sequence typing and rtxA toxin gene sequencing analysis of Kingella kingae isolates demonstrates genetic diversity and international clones.
PloS One 2012, 7, e38078.

Cohen JF, Chalumeau M, Levy C, Bidet P, Thollot F, Wollner A, Bingen E, Cohen R
Spectrum and inoculum size effect of a rapid antigen detection test for group A streptococcus in children with pharyngitis.
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Vimont S, Boyd A, Bleibtreu A, Bens M, Goujon JM, Garry L, Clermont O, Denamur E, Arlet G, Vandewalle A
The CTX-M-15-producing Escherichia coli clone O25b: H4-ST131 has high intestine colonization and urinary tract infection abilities.
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Fougère B, Gaillat J, François P, Cambau E, Corroyer B, de Wazières B, Gavazzi G, Paccalin M, LdSdPIdLFFdGeG
[Adequacy to the recommendations in urinary tract infections: a multicenter transversal survey in hospitalized patients aged over 75 years].
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Roux D, Huy C, Lolom I, Andremont A, Arlet G, Armand-Lefevre L, Lucet JC
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Zaidan M, Berçot B, Petit A, Bardin T, Richette P
Whipple disease mimicking adult-onset Still's disease and treated by anakinra: diagnosis using PCR.
Scandinavian Journal of Rheumatology 2012, 41, 321-323.

Dannaoui E, Desnos-Ollivier M, Garcia-Hermoso D, Grenouillet F, Cassaing S, Baixench MT, Bretagne S, Dromer F, Lortholary O, FMSG
Candida spp. with acquired echinocandin resistance, France, 2004-2010.
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Poirel L, Berçot B, Millemann Y, Bonnin RA, Pannaux G, Nordmann P
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Boufassa F, Goujard C, Viard JP, Carlier R, Lefebvre B, Yeni P, Bouchaud O, Capeau J, Meyer L, Vigouroux C, ACCSG
Immune deficiency could be an early risk factor for altered insulin sensitivity in antiretroviral-naive HIV-1-infected patients: the ANRS COPANA cohort.
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Lenglet H, Sztrymf B, Leroy C, Brun P, Dreyfuss D, Ricard JD
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Breton G, Bourgarit A, Pavy S, Bonnet D, Martinez V, Duval X, Longuet P, Abgrall S, Simon A, Leport C, PTSG
Treatment for tuberculosis-associated immune reconstitution inflammatory syndrome in 34 HIV-infected patients.
The International Journal of Tuberculosis and Lung Disease: The Official Journal of the International Union Against Tuberculosis and Lung Disease 2012, 16, 1365-1370.

Hong E, Barraud O, Bidet P, Bingen E, Blondiaux N, Bonacorsi S, Burucoa C, Carrer A, Fortineau N, Couetdic G, Courcol R, Garnier F, Hery-Arnaud G, Lanotte P, Le Bars H, Legrand-Quillien MC, Lemée L, Mereghetti L, Millardet C, Minet J, Plouzeau-Jayle C, Pons JL, Schneider J, Taha MK
Proficiency of PCR in hospital settings for nonculture diagnosis of invasive meningococcal infections.
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De Prost N, Dreyfuss D
How to prevent ventilator-induced lung injury?.
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Cambau E, Guillard T
Antimicrobials that affect the synthesis and conformation of nucleic acids.
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Houhamdi L, Raoult D
Different genes govern Yersinia pestis pathogenicity in Caenorhabditis elegans and human lice.
Microbial Pathogenesis 2008, 44, 435-437.

Ayyadurai S, Houhamdi L, Lepidi H, Nappez C, Raoult D, Drancourt M
Long-term persistence of virulent Yersinia pestis in soil.
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