Main publications by team


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QEM main publications

Cosentino G, Bernard M, Ambroise J, Giannoli JM, Guedj J, Débarre F, Blanquart F
SARS-CoV-2 viral dynamics in infections with Alpha and Beta variants of concern in the French community.
The Journal of Infection 2022, 84, 94-118.

Consuegra J, Gaffé J, Lenski RE, Hindré T, Barrick JE, Tenaillon O, Schneider D
Insertion-sequence-mediated mutations both promote and constrain evolvability during a long-term experiment with bacteria.
Nature Communications 2021, 12, 980.

Bridier-Nahmias A, Launay A, Bleibtreu A, Magnan M, Walewski V, Chatel J, Dion S, Robbe-Saule V, Clermont O, Norel F, Denamur E, Tenaillon O
Escherichia coli Genomic Diversity within Extraintestinal Acute Infections Argues for Adaptive Evolution at Play.
mSphere 2021, 6, e01176-20.

Czuppon P, Débarre F, Gonçalves A, Tenaillon O, Perelson AS, Guedj J, Blanquart F
Success of prophylactic antiviral therapy for SARS-CoV-2: Predicted critical efficacies and impact of different drug-specific mechanisms of action.
PLoS computational biology 2021, 17, e1008752.

Peiffer-Smadja N, Bridier-Nahmias A, Ferré VM, Charpentier C, Garé M, Rioux C, Allemand A, Lavallée P, Ghosn J, Kramer L, Descamps D, Yazdanpanah Y, Visseaux B
Emergence of E484K Mutation Following Bamlanivimab Monotherapy among High-Risk Patients Infected with the Alpha Variant of SARS-CoV-2.
Viruses 2021, 13, 1642.

Hobson CA, Bonacorsi S, Hocquet D, Baruchel A, Fahd M, Storme T, Tang R, Doit C, Tenaillon O, Birgy A
Impact of anticancer chemotherapy on the extension of beta-lactamase spectrum: an example with KPC-type carbapenemase activity towards ceftazidime-avibactam.
Scientific Reports 2020, 10, 589.

Kemble H, Eisenhauer C, Couce A, Chapron A, Magnan M, Gautier G, Le Nagard H, Nghe P, Tenaillon O
Flux, toxicity, and expression costs generate complex genetic interactions in a metabolic pathway.
Science Advances 2020, 6, eabb2236.

Hobson CA, Bonacorsi S, Jacquier H, Choudhury A, Magnan M, Cointe A, Bercot B, Tenaillon O, Birgy A
KPC Beta-Lactamases Are Permissive to Insertions and Deletions Conferring Substrate Spectrum Modifications and Resistance to Ceftazidime-Avibactam.
Antimicrobial Agents and Chemotherapy 2020, 64, e01175-20.

Choudhury A, Fenster JA, Fankhauser RG, Kaar JL, Tenaillon O, Gill RT
CRISPR/Cas9 recombineering-mediated deep mutational scanning of essential genes in Escherichia coli.
Molecular Systems Biology 2020, 16, e9265.

Escudero JA, Nivina A, Kemble HE, Loot C, Tenaillon O, Mazel D
Primary and promiscuous functions coexist during evolutionary innovation through whole protein domain acquisitions.
eLife 2020, 9, e58061.

Couce A, Tenaillon O
Mutation bias and GC content shape antimutator invasions.
Nature Communications 2019, 10, 3114.

Ghalayini M, Magnan M, Dion S, Zatout O, Bourguignon L, Tenaillon O, Lescat M
Long-term evolution of the natural isolate of Escherichia coli 536 in the mouse gut colonized after maternal transmission reveals convergence in the constitutive expression of the lactose operon.
Molecular Ecology 2019, 28, 4470-4485.

Ghalayini M, Launay A, Bridier-Nahmias A, Clermont O, Denamur E, Lescat M, Tenaillon O
Evolution of a Dominant Natural Isolate of Escherichia coli in the Human Gut over the Course of a Year Suggests a Neutral Evolution with Reduced Effective Population Size.
Applied and Environmental Microbiology 2018, 84, e02377-17.

Micaëlo M, Goubard A, La Ruche G, Denamur E, Tenaillon O, Cambau E, Jacquier H, Bercot B
Molecular epidemiology of penicillinase-producing Neisseria gonorrhoeae isolates in France.
Clinical Microbiology and Infection: The Official Publication of the European Society of Clinical Microbiology and Infectious Diseases 2017, 23, 968-973.

Couce A, Caudwell LV, Feinauer C, Hindré T, Feugeas JP, Weigt M, Lenski RE, Schneider D, Tenaillon O
Mutator genomes decay, despite sustained fitness gains, in a long-term experiment with bacteria.
Proceedings of the National Academy of Sciences of the United States of America 2017, 114, E9026-E9035.

Tenaillon O, Barrick JE, Ribeck N, Deatherage DE, Blanchard JL, Dasgupta A, Wu GC, Wielgoss S, Cruveiller S, Médigue C, Schneider D, Lenski RE
Tempo and mode of genome evolution in a 50,000-generation experiment.
Nature 2016, 536, 165-170.

Figliuzzi M, Jacquier H, Schug A, Tenaillon O, Weigt M
Coevolutionary Landscape Inference and the Context-Dependence of Mutations in Beta-Lactamase TEM-1.
Molecular Biology and Evolution 2016, 33, 268-280.

Feugeas JP, Tourret J, Launay A, Bouvet O, Hoede C, Denamur E, Tenaillon O
Links between Transcription, Environmental Adaptation and Gene Variability in Escherichia coli: Correlations between Gene Expression and Gene Variability Reflect Growth Efficiencies.
Molecular Biology and Evolution 2016

Long A, Liti G, Luptak A, Tenaillon O
Elucidating the molecular architecture of adaptation via evolve and resequence experiments.
Nature Reviews. Genetics 2015, 16, 567-582.

Blanquart F, Achaz G, Bataillon T, Tenaillon O
Properties of selected mutations and genotypic landscapes under Fisher's geometric model.
Evolution; International Journal of Organic Evolution 2014, 68, 3537-3554.

Jacquier H, Birgy A, Le Nagard H, Mechulam Y, Schmitt E, Glodt J, Bercot B, Petit E, Poulain J, Barnaud G, Gros PA, Tenaillon O
Capturing the mutational landscape of the beta-lactamase TEM-1.
Proceedings of the National Academy of Sciences of the United States of America 2013, 110, 13067–13072.

Silander OK, Tenaillon O, Chao L
Understanding the Evolutionary Fate of Finite Populations: The Dynamics of Mutational Effects.
PLoS Biol 2007, 5, e94.

Bjedov I, Tenaillon O, Gérard B, Souza V, Denamur E, Radman M, Taddei F, Matic I
Stress-induced mutagenesis in bacteria.
Science (New York, N.Y.) 2003, 300, 1404-1409.

EVRest main publications

Royer G, Clermont O, Marin J, Condamine B, Dion S, Blanquart F, Galardini M, Denamur E
Epistatic interactions between the high pathogenicity island and other iron uptake systems shape Escherichia coli extra-intestinal virulence.
Nature Communications 2023, 14, 3667.

Lafaurie M, Chevret S, Fontaine JP, Mongiat-Artus P, de Lastours V, Escaut L, Jaureguiberry S, Bernard L, Bruyere F, Gatey C, Abgrall S, Ferreyra M, Aumaitre H, Aparicio C, Garrait V, Meyssonnier V, Bourgarit-Durand A, Chabrol A, Piet E, Talarmin JP, Morrier M, Canoui E, Charlier C, Etienne M, Pacanowski J, Grall N, Desseaux K, Empana-Barat F, Madeleine I, Bercot B, Molina JM, Lefort A, PROSTASHORT Study Group
Antimicrobial for 7 or 14 Days for Febrile Urinary Tract Infection in Men: A Multicenter Noninferiority Double-Blind, Placebo-Controlled, Randomized Clinical Trial.
Clinical Infectious Diseases: An Official Publication of the Infectious Diseases Society of America 2023, 76, 2154-2162.

Gschwind R, Ugarcina Perovic S, Weiss M, Petitjean M, Lao J, Coelho LP, Ruppé E
ResFinderFG v2.0: a database of antibiotic resistance genes obtained by functional metagenomics.
Nucleic Acids Research 2023, 51, W493-W500.

Allain M, Mahérault AC, Gachet B, Martinez C, Condamine B, Magnan M, Kempf I, Denamur E, Landraud L
Dissemination of IncI plasmid encoding bla CTX-M-1 is not hampered by its fitness cost in the pig's gut.
Antimicrobial Agents and Chemotherapy 2023, 67, e0011123.

Delattre R, Seurat J, Haddad F, Nguyen TT, Gaborieau B, Kane R, Dufour N, Ricard JD, Guedj J, Debarbieux L
Combination of in vivo phage therapy data with in silico model highlights key parameters for pneumonia treatment efficacy.
Cell Reports 2022, 39, 110825.

Bidet P, Birgy A, Ouldali N, Béchet S, Levy C, Madhi F, Sobral E, Cohen R, Bonacorsi S
Comparative genomic analysis of ESBL-producing Escherichia coli from faecal carriage and febrile urinary tract infection in children: a prospective multicentre study.
JAC-antimicrobial resistance 2022, 4, dlac056.

Marin J, Clermont O, Royer G, Mercier-Darty M, Decousser JW, Tenaillon O, Denamur E, Blanquart F
The Population Genomics of Increased Virulence and Antibiotic Resistance in Human Commensal Escherichia coli over 30 Years in France.
Applied and Environmental Microbiology 2022, 88, e0066422.

Lo S, Lolom I, Goldstein V, Petitjean M, Rondinaud E, Bunel-Gourdy V, Tran Dinh A, Wicky PH, Ruppé E, d'Humières C, Lucet JC, Armand-Lefèvre L
Simultaneous Hospital Outbreaks of New Delhi Metallo-β-Lactamase-Producing Enterobacterales Unraveled Using Whole-Genome Sequencing.
Microbiology Spectrum 2022, 10, e0228721.

Denamur E, Clermont O, Bonacorsi S, Gordon D
The population genetics of pathogenic Escherichia coli.
Nature Reviews. Microbiology 2021, 19, 37-54.

Petitjean M, Condamine B, Burdet C, Denamur E, Ruppé E
Phylum barrier and Escherichia coli intra-species phylogeny drive the acquisition of antibiotic-resistance genes.
Microbial Genomics 2021

Armand-Lefèvre L, Rondinaud E, Desvillechabrol D, Mullaert J, Clermont O, Petitjean M, Ruppe E, Cokelaer T, Bouchier C, Tenaillon O, Ma L, Nooroya Y, Matheron S, The Voyag-R Study Group , Andremont A, Denamur E, Kennedy SP
Dynamics of extended-spectrum beta-lactamase-producing Enterobacterales colonization in long-term carriers following travel abroad.
Microbial Genomics 2021, 7, 000576.

Royer G, Darty MM, Clermont O, Condamine B, Laouenan C, Decousser JW, Vallenet D, Lefort A, de Lastours V, Denamur E, CaSg
Phylogroup stability contrasts with high within sequence type complex dynamics of Escherichia coli bloodstream infection isolates over a 12-year period.
Genome Medicine 2021, 13, 77.

Caméléna F, Morel F, Merimèche M, Decousser JW, Jacquier H, Clermont O, Darty M, Mainardis M, Cambau E, Tenaillon O, Denamur E, Berçot B, IAME Resistance Group
Genomic characterization of 16S rRNA methyltransferase-producing Escherichia coli isolates from the Parisian area, France.
The Journal of Antimicrobial Chemotherapy 2020, 75, 1726-1735.

Massot M, Haenni M, Nguyen TT, Madec JY, Mentré F, Denamur E
Temporal dynamics of the fecal microbiota in veal calves in a 6-month field trial.
Animal Microbiome 2020, 2, 32.

Galardini M, Clermont O, Baron A, Busby B, Dion S, Schubert S, Beltrao P, Denamur E
Major role of iron uptake systems in the intrinsic extra-intestinal virulence of the genus Escherichia revealed by a genome-wide association study.
PLoS genetics 2020, 16, e1009065.

Ruppé E, Ghozlane A, Tap J, Pons N, Alvarez AS, Maziers N, Cuesta T, Hernando-Amado S, Clares I, Martínez JL, Coque TM, Baquero F, Lanza VF, Máiz L, Goulenok T, de Lastours V, Amor N, Fantin B, Wieder I, Andremont A, van Schaik W, Rogers M, Zhang X, Willems RJL, de Brevern AG, Batto JM, Blottière HM, Léonard P, Léjard V, Letur A, Levenez F, Weiszer K, Haimet F, Doré J, Kennedy SP, Ehrlich SD
Prediction of the intestinal resistome by a three-dimensional structure-based method.
Nature Microbiology 2019, 4, 112-123.

Branger C, Ledda A, Billard-Pomares T, Doublet B, Barbe V, Roche D, Médigue C, Arlet G, Denamur E
Specialization of small non-conjugative plasmids in Escherichia coli according to their family types.
Microbial Genomics 2019

Kieffer N, Royer G, Decousser JW, Bourrel AS, Palmieri M, Ortiz De La Rosa JM, Jacquier H, Denamur E, Nordmann P, Poirel L
mcr-9, an Inducible Gene Encoding an Acquired Phosphoethanolamine Transferase in Escherichia coli, and Its Origin.
Antimicrobial Agents and Chemotherapy 2019, 63,

Mahérault AC, Kemble H, Magnan M, Gachet B, Roche D, Le Nagard H, Tenaillon O, Denamur E, Branger C, Landraud L
Advantage of the F2:A1:B- IncF Pandemic Plasmid over IncC Plasmids in In Vitro Acquisition and Evolution of blaCTX-M Gene-Bearing Plasmids in Escherichia coli.
Antimicrobial Agents and Chemotherapy 2019, 63,

de Gunzburg J, Ghozlane A, Ducher A, Le Chatelier E, Duval X, Ruppe E, Armand-Lefevre L, Sablier-Gallis F, Burdet C, Alavoine L, Chachaty E, Augustin V, Varastet M, Levenez F, Kennedy S, Pons N, Mentre F, Andremont A
Protection of the Human Gut Microbiome From Antibiotics.
J Infect Dis 2018, 217, 628-636.

Berleur M, Guérin F, Massias L, Chau F, Poujade J, Cattoir V, Fantin B, de Lastours V
Activity of fosfomycin alone or combined with temocillin in vitro and in a murine model of peritonitis due to KPC-3- or OXA-48-producing Escherichia coli.
The Journal of Antimicrobial Chemotherapy 2018, 73, 3074-3080.

Cointe A, Birgy A, Mariani-Kurkdjian P, Liguori S, Courroux C, Blanco J, Delannoy S, Fach P, Loukiadis E, Bidet P, Bonacorsi S
Emerging Multidrug-Resistant Hybrid Pathotype Shiga Toxin-Producing Escherichia coli O80 and Related Strains of Clonal Complex 165, Europe.
Emerging Infectious Diseases 2018, 24, 2262-2269.

Dufour N, Delattre R, Ricard JD, Debarbieux L
The Lysis of Pathogenic Escherichia coli by Bacteriophages Releases Less Endotoxin Than by β-Lactams.
Clinical Infectious Diseases: An Official Publication of the Infectious Diseases Society of America 2017, 64, 1582-1588.

BIPID main publications

Ader F, Bouscambert-Duchamp M, Hites M, Peiffer-Smadja N, Poissy J, Belhadi D, Diallo A, Lê MP, Peytavin G, Staub T, Greil R, Guedj J, Paiva JA, Costagliola D, Yazdanpanah Y, Burdet C, Mentré F, DSG
Remdesivir plus standard of care versus standard of care alone for the treatment of patients admitted to hospital with COVID-19 (DisCoVeRy): a phase 3, randomised, controlled, open-label trial.
The Lancet. Infectious Diseases 2022, 22, 209-221.

Guk J, Guedj J, Burdet C, Andremont A, de Gunzburg J, Ducher A, Mentré F
Modeling the Effect of DAV132, a Novel Colon-Targeted Adsorbent, on Fecal Concentrations of Moxifloxacin and Gut Microbiota Diversity in Healthy Volunteers.
Clinical Pharmacology and Therapeutics 2021, 109, 1045-1054.

French J, Mentré F
Welcome to the statistics and pharmacometrics themed issue.
CPT: pharmacometrics & systems pharmacology 2021, 10, 273-274.

Seurat J, Tang Y, Mentré F, Nguyen TT
Finding optimal design in nonlinear mixed effect models using multiplicative algorithms.
Computer Methods and Programs in Biomedicine 2021, 207, 106126.

Néant N, Lingas G, Le Hingrat Q, Ghosn J, Engelmann I, Lepiller Q, Gaymard A, Ferré V, Hartard C, Plantier JC, Thibault V, Marlet J, Montes B, Bouiller K, Lescure FX, Timsit JF, Faure E, Poissy J, Chidiac C, Raffi F, Kimmoun A, Etienne M, Richard JC, Tattevin P, Garot D, Le Moing V, Bachelet D, Tardivon C, Duval X, Yazdanpanah Y, Mentré F, Laouénan C, Visseaux B, Guedj J, FCCIaFCSg
Modeling SARS-CoV-2 viral kinetics and association with mortality in hospitalized patients from the French COVID cohort.
Proceedings of the National Academy of Sciences of the United States of America 2021, 118,

Duval X, Le Moing V, Tubiana S, Esposito-Farèse M, Ilic-Habensus E, Leclercq F, Bourdon A, Goehringer F, Selton-Suty C, Chevalier E, Boutoille D, Piriou N, Le Tourneau T, Chirouze C, Seronde MF, Morel O, Piroth L, Eicher JC, Humbert O, Revest M, Thébault E, Devillers A, Delahaye F, Boibieux A, Grégoire B, Hoen B, Laouenan C, Iung B, Rouzet F, ATsg
Impact of Systematic Whole-body 18F-Fluorodeoxyglucose PET/CT on the Management of Patients Suspected of Infective Endocarditis: The Prospective Multicenter TEPvENDO Study.
Clinical Infectious Diseases: An Official Publication of the Infectious Diseases Society of America 2021, 73, 393-403.

Sibiude J, Le Chenadec J, Mandelbrot L, Dollfus C, Matheron S, Lelong N, Avettand-Fenoel V, Brossard M, Frange P, Reliquet V, Warszawski J, Tubiana R, Esg
Risk of birth defects and perinatal outcomes in HIV-infected women exposed to integrase strand inhibitors during pregnancy.
AIDS (London, England) 2021, 35, 219-226.

Manchon P, Belhadi D, Mentré F, Laouénan C
Evaluation by simulation of clinical trial designs for evaluation of treatment during a viral haemorrhagic fever outbreak.
BMC medical research methodology 2021, 21, 98.

Riglet F, Mentre F, Veyrat-Follet C, Bertrand J
Bayesian Individual Dynamic Predictions with Uncertainty of Longitudinal Biomarkers and Risks of Survival Events in a Joint Modelling Framework: a Comparison Between Stan, Monolix, and NONMEM.
The AAPS journal 2020, 22, 50.

Basmaci R, Deschamps K, Levy C, Mathy V, Corrard F, Thollot F, Béchet S, Sobral E, Bidet P, Cohen R, Bonacorsi S
Prevalence of Kingella kingae oropharyngeal carriage and predominance of type a and type b polysaccharide capsules among French young children.
Clinical Microbiology and Infection: The Official Publication of the European Society of Clinical Microbiology and Infectious Diseases 2019, 25, 114-116.

Burdet C, Nguyen TT, Duval X, Ferreira S, Andremont A, Guedj J, Mentré F, DC1SG
Impact of Antibiotic Gut Exposure on the Temporal Changes in Microbiome Diversity.
Antimicrobial Agents and Chemotherapy 2019, 63, e00820-19.

Madelain V, Baize S, Jacquot F, Reynard S, Fizet A, Barron S, Solas C, Lacarelle B, Carbonnelle C, Mentré F, Raoul H, de Lamballerie X, Guedj J
Ebola viral dynamics in nonhuman primates provides insights into virus immuno-pathogenesis and antiviral strategies.
Nature Communications 2018, 9, 4013.

Nguyen TH, Mouksassi MS, Holford N, Al-Huniti N, Freedman I, Hooker AC, John J, Karlsson MO, Mould DR, Perez Ruixo JJ, Plan EL, Savic R, van Hasselt JG, Weber B, Zhou C, Comets E, Mentre F
Model Evaluation of Continuous Data Pharmacometric Models: Metrics and Graphics.
CPT Pharmacometrics Syst Pharmacol 2017, 6, 87-109.

Desmée S, Mentré F, Veyrat-Follet C, Sébastien B, Guedj J
Using the SAEM algorithm for mechanistic joint models characterizing the relationship between nonlinear PSA kinetics and survival in prostate cancer patients.
Biometrics 2017, 73, 305-312.

Comets E, Lavenu A, Lavielle M
Parameter estimation in nonlinear mixed effect models using saemix, an R implementation of the SAEM algorithm.
Journal of Statistical Software 2017

Tubiana S, Blotière PO, Hoen B, Lesclous P, Millot S, Rudant J, Weill A, Coste J, Alla F, Duval X
Dental procedures, antibiotic prophylaxis, and endocarditis among people with prosthetic heart valves: nationwide population based cohort and a case crossover study.
BMJ (Clinical research ed.) 2017, 358, j3776.

DeSCID main publications

Buetti N, Ruckly S, de Montmollin E, Reignier J, Terzi N, Cohen Y, Shiami S, Dupuis C, Timsit JF
COVID-19 increased the risk of ICU-acquired bloodstream infections: a case-cohort study from the multicentric OUTCOMEREA network.
Intensive Care Medicine 2021, 47, 180-187.

Ghosn J, Piroth L, Epaulard O, Le Turnier P, Mentré F, Bachelet D, Laouénan C, FCcsaig
Persistent COVID-19 symptoms are highly prevalent 6 months after hospitalization: results from a large prospective cohort.
Clinical Microbiology and Infection: The Official Publication of the European Society of Clinical Microbiology and Infectious Diseases 2021, 27, 1041.e1-1041.e4.

Charpentier C, Storto A, Soulié C, Ferré VM, Wirden M, Joly V, Lambert-Niclot S, Palich R, Morand-Joubert L, Landman R, Lacombe K, Katlama C, Ghosn J, Marcelin AG, Calvez V, Descamps D
Prevalence of genotypic baseline risk factors for cabotegravir + rilpivirine failure among ARV-naive patients.
The Journal of Antimicrobial Chemotherapy 2021, 76, 2983-2987.

Bouzid D, Casalino E, Mullaert J, Laurent O, Duval X, Lescure FX, Peiffer Smadja N, Tubiana S, Armand Lefèvre L, Descamps D, Fidouh N, Choquet C, Lucet JC, Visseaux B
Added value of rapid respiratory syndromic testing at point of care versus central laboratory testing: a controlled clinical trial.
The Journal of Antimicrobial Chemotherapy 2021, 76, iii20-iii27.

Lescure FX, Bouadma L, Nguyen D, Parisey M, Wicky PH, Behillil S, Gaymard A, Bouscambert-Duchamp M, Donati F, Le Hingrat Q, Enouf V, Houhou-Fidouh N, Valette M, Mailles A, Lucet JC, Mentre F, Duval X, Descamps D, Malvy D, Timsit JF, Lina B, van-der-Werf S, Yazdanpanah Y
Clinical and virological data of the first cases of COVID-19 in Europe: a case series.
The Lancet. Infectious Diseases 2020, 20, 697-706.

Charpentier C, Peytavin G, Raffi F, Burdet C, Landman R, Lê MP, Katlama C, Collin G, Benalycherif A, Cabie A, Mentré F, Yazdanpanah Y, Descamps D, Joly V
Pharmacovirological analyses of blood and male genital compartment in patients receiving dolutegravir + lamivudine dual therapy as a switch strategy (ANRS 167 LAMIDOL trial).
The Journal of Antimicrobial Chemotherapy 2020, 75, 1611-1617.

Buetti N, Ruckly S, Lucet JC, Perozziello A, Mimoz O, Souweine B, Timsit JF
The Insertion Site Should Be Considered for the Empirical Therapy of Short-Term Central Venous and Arterial Catheter-Related Infections.
Critical Care Medicine 2020, 48, 739-744.

Le Hingrat Q, Visseaux B, Bertine M, Chauveau L, Schwartz O, Collin F, Damond F, Matheron S, Descamps D, Charpentier C
Genetic Variability of Long Terminal Repeat Region between HIV-2 Groups Impacts Transcriptional Activity.
Journal of Virology 2020, 94,

Castry M, Cousien A, Supervie V, Velter A, Ghosn J, Paltiel AD, Yazdanpanah Y, Deuffic-Burban S
Impact of test-and-treat and risk reduction strategies on HCV transmission among MSM living with HIV in France: a modelling approach.
Gut 2020

Kardaś-Słoma L, Yazdanpanah Y, Perozziello A, Zahar JR, Lescure FX, Cousien A, Lucet JC
Hand hygiene improvement or antibiotic restriction to control the household transmission of extended-spectrum β-lactamase-producing Escherichia coli: a mathematical modelling study.
Antimicrobial Resistance and Infection Control 2020, 9, 139.

Ferré V, Ekouevi D, Gbeasor-Komlanvi F, Collin G, Le Hingrat Q, Tchounga B, Salou M, Descamps D, Charpentier C, Dagnra A
Prevalence of human papillomavirus, human immunodeficiency virus and other sexually transmitted infections among female sex workers in Togo: a national cross-sectional survey.
Clinical Microbiology and Infection 2019, 25, 1560.e1-1560.e7.

Perozziello A, Lescure FX, Truel A, Routelous C, Vaillant L, Yazdanpanah Y, Lucet JC, Csg
Prescribers' experience and opinions on antimicrobial stewardship programmes in hospitals: a French nationwide survey.
The Journal of Antimicrobial Chemotherapy 2019, 74, 2451-2458.

Ibn Saied W, Mourvillier B, Cohen Y, Ruckly S, Reignier J, Marcotte G, Siami S, Bouadma L, Darmon M, de Montmollin E, Argaud L, Kallel H, Garrouste-Orgeas M, Soufir L, Schwebel C, Souweine B, Glodgran-Toledano D, Papazian L, Timsit JF
A Comparison of the Mortality Risk Associated With Ventilator-Acquired Bacterial Pneumonia and Nonventilator ICU-Acquired Bacterial Pneumonia*:.
Critical Care Medicine 2019, 47, 345-352.

Deuffic-Burban S, Huneau A, Verleene A, Brouard C, Pillonel J, Le Strat Y, Cossais S, Roudot-Thoraval F, Canva V, Mathurin P, Dhumeaux D, Yazdanpanah Y
Assessing the cost-effectiveness of hepatitis C screening strategies in France.
Journal of Hepatology 2018, 69, 785-792.

Matheron S, Descamps D, Gallien S, Besseghir A, Sellier P, Blum L, Mortier E, Charpentier C, Tubiana R, Damond F, Peytavin G, Ponscarme D, Collin F, Brun-Vezinet F, Chene G, France REcherche Nord&Sud Sida-Hiv Hépatites (ANRS) 159 HIV-2 Trial Study Group
First-line Raltegravir/Emtricitabine/Tenofovir Combination in Human Immunodeficiency Virus Type 2 (HIV-2) Infection: A Phase 2, Noncomparative Trial (ANRS 159 HIV-2).
Clinical Infectious Diseases: An Official Publication of the Infectious Diseases Society of America 2018, 67, 1161-1167.


IAME SARS COV 2 / COVID 19 list of publications


(click to expand or collapse)

 2023                                                                            

Farfour E, Clichet V, Péan de Ponfilly G, Carbonnelle E, Vasse M
Impact of COVID-19 pandemic on blood culture practices and bacteremia epidemiology..
Diagnostic microbiology and infectious disease 2023, 107, 116002.

Hassold N, Brichler S, Gater Y, Leclerc D, Gordien E, Bouchaud O, Carbonnelle E, Mechai F, Cordel H, Delagreverie H
Mixed outcomes following a third SARS-CoV-2 vaccine dose in previously unresponsive people with HIV.
Journal of Clinical Virology: The Official Publication of the Pan American Society for Clinical Virology 2023, 158, 105347.

Poisson M, Sibiude J, Mosnino E, Koual M, Landraud L, Fidouh N, Mandelbrot L, Vauloup-Fellous C, Luton D, Benachi A, Vivanti AJ, Picone O
Impact of variants of SARS-CoV-2 on obstetrical and neonatal outcomes.
Journal of Gynecology Obstetrics and Human Reproduction 2023, 52, 102566.

Coppée R, Chenane HR, Bridier-Nahmias A, Tcherakian C, Catherinot E, Collin G, Lebourgeois S, Visseaux B, Descamps D, Vasse M, Farfour E
Temporal dynamics of RSV shedding and genetic diversity in adults during the COVID-19 pandemic in a French hospital, early 2021.
Virus Research 2023, 323, 198950.

Penaud V, Duburcq T, Bureau C, Salmon Gandonnière C, Arrestier R, Henri S, Dres M, Jacquier S, Prost ND, Giraud R, Ricard JD, Roux D, Uhel F, Legouis D, Verney C
Kidney Increase Natriuresis but Not Glomerular Filtration Under Veno-venous ECMO, a Retrospective Study.
Journal of Intensive Care Medicine 2023, 8850666231195755.

Walter T, Ricard JD
Extended prone positioning for intubated ARDS: a review..
Critical care (London, England) 2023, 27, 264.

Nel I, Parmentier C, Dehoux L, Minier M, Duneton C, Charbit M, Baudouin V, Bidet P, Carol A, Cheyssac E, Delbet JD, Guérin-El Khourouj V, Louillet F, Ulinski T, Delaugerre C, Carcelain G, Hogan J
Optimizing COVID-19 Vaccination Strategy in Pediatric Kidney Transplant Recipients: Humoral and Cellular Response to SARS-CoV-2 mRNA Vaccination.
Transplant International: Official Journal of the European Society for Organ Transplantation 2023, 36, 11153.

Rezzoug I, Visseaux B, Bertine M, Parisey M, Bonnal C, Ruppe E, Descamps D, Timsit JF, Yazdanpanah Y, Armand-Lefevre L, Houze S, Argy N
Faecal Viral Excretion and Gastrointestinal Co-Infection Do Not Explain Digestive Presentation in COVID-19 Patients.
Microorganisms 2023, 11, 1780.

Coppée R, Blanquart F, Jary A, Leducq V, Ferré VM, Franco Yusti AM, Daniel L, Charpentier C, Lebourgeois S, Zafilaza K, Calvez V, Descamps D, Marcelin AG, Visseaux B, Bridier-Nahmias A
Phylodynamics of SARS-CoV-2 in France, Europe, and the world in 2020.
eLife 2023, 12, e82538.

 2022                                                                            

Rybak A, Levy C, Angoulvant F, Auvrignon A, Gembara P, Danis K, Vaux S, Levy-Bruhl D, van der Werf S, Béchet S, Bonacorsi S, Assad Z, Lazzati A, Michel M, Kaguelidou F, Faye A, Cohen R, Varon E, Ouldali N
Association of Nonpharmaceutical Interventions During the COVID-19 Pandemic With Invasive Pneumococcal Disease, Pneumococcal Carriage, and Respiratory Viral Infections Among Children in France.
JAMA network open 2022, 5, e2218959.

Villemonteix J, Cohen L, Guihot A, Guérin V, Moulin C, Caseris M, Carol A, Bonacorsi S, Carcelain G
Comparison between enzyme-linked immunospot assay and intracellular cytokine flow cytometry assays for the evaluation of T cell response to SARS-CoV-2 after symptomatic COVID-19.
Immunity, Inflammation and Disease 2022, 10, e617.

Ayrolles A, Ellul P, Trebossen V, Houhou-Fidouh N, Bonacorsi S, Descamps D, Delorme R
Is SARS-CoV-2 seroconversion a risk factor for severe and acute psychiatric symptoms in children?.
Neuropsychopharmacology Reports 2022, 42, 218-220.

Foutel-Rodier F, Blanquart F, Courau P, Czuppon P, Duchamps JJ, Gamblin J, Kerdoncuff É, Kulathinal R, Régnier L, Vuduc L, Lambert A, Schertzer E
From individual-based epidemic models to McKendrick-von Foerster PDEs: a guide to modeling and inferring COVID-19 dynamics.
Journal of Mathematical Biology 2022, 85, 43.

Blot S, Ruppé E, Harbarth S, Asehnoune K, Poulakou G, Luyt CE, Rello J, Klompas M, Depuydt P, Eckmann C, Martin-Loeches I, Povoa P, Bouadma L, Timsit JF, Zahar JR
Healthcare-associated infections in adult intensive care unit patients: Changes in epidemiology, diagnosis, prevention and contributions of new technologies.
Intensive & Critical Care Nursing 2022, 70, 103227.

Husain M, Valayer S, Poey N, Rondinaud E, d'Humières C, Visseaux B, Lariven S, Lescure FX, Deconinck L
Pulmonary bacterial infections in adult patients hospitalized for COVID-19 in standard wards.
Infectious Diseases Now 2022, 52, 208-213.

Amarsy R, Trystram D, Cambau E, Monteil C, Fournier S, Oliary J, Junot H, Sabatier P, Porcher R, Robert J, Jarlier V, “la Collégiale de Bactériologie–Virologie–Hygiène de l'Assistance Publique – Hôpitaux de Paris”
Surging bloodstream infections and antimicrobial resistance during the first wave of COVID-19: a study in a large multihospital institution in the Paris region.
International journal of infectious diseases: IJID: official publication of the International Society for Infectious Diseases 2022, 114, 90-96.

Nagle S, Tandjaoui-Lambiotte Y, Boubaya M, Athenaïs G, Alloui C, Bloch-Queyrat C, Carbonnelle E, Brichler S, Cohen Y, Zahar JR, Delagrèverie H
Environmental SARS-CoV-2 contamination in hospital rooms of patients with acute COVID-19.
The Journal of Hospital Infection 2022, 126, 116-122.

Cosentino G, Bernard M, Ambroise J, Giannoli JM, Guedj J, Débarre F, Blanquart F
SARS-CoV-2 viral dynamics in infections with Alpha and Beta variants of concern in the French community.
The Journal of Infection 2022, 84, 94-118.

CORIMUNO-19 Collaborative group
Sarilumab in adults hospitalised with moderate-to-severe COVID-19 pneumonia (CORIMUNO-SARI-1): An open-label randomised controlled trial.
The Lancet. Rheumatology 2022, 4, e24-e32.

Leducq V, Jary A, Bridier-Nahmias A, Daniel L, Zafilaza K, Damond F, Goldstein V, Duval A, Blanquart F, Calvez V, Descamps D, Marcelin AG, Visseaux B
Nosocomial transmission clusters and lineage diversity characterized by SARS-CoV-2 genomes from two large hospitals in Paris, France, in 2020.
Scientific Reports 2022, 12, 1094.

Taillé C, Roche N, Tesson F, Tardivon C, Tran VT, Couffignal C
Belief and adherence to COVID 19-lockdown restrictions in patients with asthma versus other chronic diseases: results from a cross-sectional survey nested in the ComPaRe e-cohort, in France.
The Journal of Asthma: Official Journal of the Association for the Care of Asthma 2022, 59, 1491-1500.

Bouzid D, Mirault T, Ghazali A, Muller L, Casalino E, Peiffer Smadja N, Auber B, Guerin M, Sambet CH, Etienne I, De Lastours V, Badoual C, Lemogne C, Ruszniewski P, Université Paris Cité' Osce Study Group n, Faye A, Tran Dinh A
Feasibility of large-scale eOSCES: the simultaneous evaluation of 500 medical students during a mock examination.
Medical Education Online 2022, 27, 2084261.

Rybak A, Aupiais C, Cotillon M, Basmaci R, de Pontual L, Bonacorsi S, Mariani P, Landraud L, Brichler S, Poilane I, Ouldali N, Titomanlio L
Reassessing the Performance of the "Step-By-Step" Approach to Febrile Infants 90 Days of Age and Younger in the Context of the COVID-19 Pandemic: A Multicentric Retrospective Study.
The Pediatric Infectious Disease Journal 2022, 41, e365-e368.

Hassold N, Brichler S, Ouedraogo E, Leclerc D, Carroue S, Gater Y, Alloui C, Carbonnelle E, Bouchaud O, Mechai F, Cordel H, Delagreverie H
Impaired antibody response to COVID-19 vaccination in advanced HIV infection.
AIDS (London, England) 2022, 36, F1-F5.

Wicky PH, d'Humières C, Timsit JF
How common is ventilator-associated pneumonia after coronavirus disease 2019?.
Current Opinion in Infectious Diseases 2022, 35, 170-175.

Hajage D, Combes A, Guervilly C, Lebreton G, Mercat A, Pavot A, Nseir S, Mekontso-Dessap A, Mongardon N, Mira JP, Ricard JD, Beurton A, Tachon G, Kontar L, Le Terrier C, Richard JC, Mégarbane B, Keogh RH, Belot A, Maringe C, Leyrat C, Schmidt M, COVID-ICU Investigators
Extracorporeal Membrane Oxygenation for Severe Acute Respiratory Distress Syndrome Associated with COVID-19: An Emulated Target Trial Analysis.
American Journal of Respiratory and Critical Care Medicine 2022, 206, 281-294.

Roca O, Caritg O, Santafé M, Ramos FJ, Pacheco A, García-de-Acilu M, Ferrer R, Schultz MJ, Ricard JD
Closed-loop oxygen control improves oxygen therapy in acute hypoxemic respiratory failure patients under high flow nasal oxygen: a randomized cross-over study (the HILOOP study).
Critical Care (London, England) 2022, 26, 108.

Walter T, Zucman N, Mullaert J, Thiry I, Gernez C, Roux D, Ricard JD
Extended prone positioning duration for COVID-19-related ARDS: benefits and detriments.
Critical Care (London, England) 2022, 26, 208.

Patrier J, Villageois-Tran K, Szychowiak P, Ruckly S, Gschwind R, Wicky PH, Gueye S, Armand-Lefevre L, Marzouk M, Sonneville R, Bouadma L, Petitjean M, Lamara F, de Montmollin E, Timsit JF, Ruppé E, French COVID Cohort Study Group
Oropharyngeal and intestinal concentrations of opportunistic pathogens are independently associated with death of SARS-CoV-2 critically ill adults.
Critical Care (London, England) 2022, 26, 300.

Szychowiak P, Villageois-Tran K, Patrier J, Timsit JF, Ruppé É
The role of the microbiota in the management of intensive care patients.
Annals of Intensive Care 2022, 12, 3.

Massart N, Maxime V, Fillatre P, Razazi K, Ferré A, Moine P, Legay F, Voiriot G, Amara M, Santi F, Nseir S, Marque-Juillet S, Bounab R, Barbarot N, Bruneel F, Luyt CE, COVID ICU Bacteremia Study Group on behalf of the COVID-ICU Investigators
Correction to: Characteristics and prognosis of bloodstream infection in patients with COVID‑19 admitted in the ICU: an ancillary study of the COVID‑ICU study.
Annals of Intensive Care 2022, 12, 4.

Viriot D, Lucas E, de Barbeyrac B, Bébéar C, Fouéré S, Dupin N, Bertolotti A, Berçot B, Cazanave C, Delmas G, Pillonel J, Lot F, Ngangro NN
Use of healthcare reimbursement data to monitor bacterial sexually transmitted infection testing in France, 2006 to 2020.
Euro Surveillance: Bulletin Europeen Sur Les Maladies Transmissibles = European Communicable Disease Bulletin 2022, 27,

d'Humières C, Gaïa N, Gueye S, de Lastours V, Leflon-Guibout V, Maataoui N, Duprilot M, Lecronier M, Rousseau MA, Gamany N, Lescure FX, Senard O, Deconinck L, Dollat M, Isernia V, Le Hur AC, Petitjean M, Nazimoudine A, Le Gac S, Chalal S, Ferreira S, Lazarevic V, Guigon G, Gervasi G, Armand-Lefèvre L, Schrenzel J, Ruppé E
Contribution of Clinical Metagenomics to the Diagnosis of Bone and Joint Infections.
Frontiers in Microbiology 2022, 13, 863777.

Fourati S, Audureau E, Arrestier R, Marot S, Dubois C, Voiriot G, Luyt CE, Urbina T, Mayaux J, Roque-Afonso AM, Pham T, Landraud L, Visseaux B, Roux D, Bellaiche R, L'honneur AS, Ait Hamou Z, Brichler S, Gaudry S, Salmona M, Clere-Jehl R, Azoulay E, Morand-Joubert L, Marcelin AG, Chaix ML, Descamps D, Mekontso Dessap A, Rodriguez C, Pawlotsky JM, de Prost N
SARS-CoV-2 Genomic Characteristics and Clinical Impact of SARS-CoV-2 Viral Diversity in Critically Ill COVID-19 Patients: A Prospective Multicenter Cohort Study.
Viruses 2022, 14, 1529.

Bouzid D, Visseaux B, Kassasseya C, Daoud A, Fémy F, Hermand C, Truchot J, Beaune S, Javaud N, Peyrony O, Chauvin A, Vaittinada Ayar P, Bourg A, Riou B, Marot S, Bloom B, Cachanado M, Simon T, Freund Y, IMProving Emergency Care (IMPEC) FHU Collaborators Group
Comparison of Patients Infected With Delta Versus Omicron COVID-19 Variants Presenting to Paris Emergency Departments : A Retrospective Cohort Study.
Annals of Internal Medicine 2022, 175, 831-837.

 2021                                                                            

Hermine O, Mariette X, Tharaux PL, Resche-Rigon M, Porcher R, Ravaud P, CORIMUNO-19 Collaborative Group
Effect of Tocilizumab vs Usual Care in Adults Hospitalized With COVID-19 and Moderate or Severe Pneumonia: A Randomized Clinical Trial.
JAMA internal medicine 2021, 181, 32-40.

COVID-ICU Group on behalf of the REVA Network and the COVID-ICU Investigators
Clinical characteristics and day-90 outcomes of 4244 critically ill adults with COVID-19: a prospective cohort study.
Intensive Care Medicine 2021, 47, 60-73.

Chomton M, Marsac L, Deho A, Maroni A, Geslain G, Frannais-Haverland K, Robert-Debré University Hospital Study Group, Nicolas-Robin A, Levy M
Transforming a paediatric ICU to an adult ICU for severe Covid-19: lessons learned.
European Journal of Pediatrics 2021, 180, 2319-2323.

Chomton M, Marsac L, Deho A, Maroni A, Geslain G, Frannais-Haverland K, Robert-Debré University Hospital Study Group, Nicolas-Robin A, Levy M
Correction to: Transforming a paediatric ICU to an adult ICU for severe Covid-19: lessons learned.
European Journal of Pediatrics 2021

Maataoui N, Chemali L, Patrier J, Tran Dinh A, Le Fèvre L, Lortat-Jacob B, Marzouk M, d'Humières C, Rondinaud E, Ruppé E, Montravers P, Timsit JF, Armand-Lefèvre L
Impact of rapid multiplex PCR on management of antibiotic therapy in COVID-19-positive patients hospitalized in intensive care unit.
European Journal of Clinical Microbiology & Infectious Diseases: Official Publication of the European Society of Clinical Microbiology 2021, 40, 2227-2234.

Vauloup-Fellous C, Maylin S, Périllaud-Dubois C, Brichler S, Alloui C, Gordien E, Rameix-Welti MA, Gault E, Moreau F, Fourati S, Challine D, Pawlotsky JM, Houhou-Fidouh N, Damond F, Mackiewicz V, Charpentier C, Méritet JF, Rozenberg F, Podglajen I, Marot S, Petit H, Burrel S, Akhavan S, Leruez-Ville M, Avettand-Fenoel V, Fourgeaud J, Guilleminot T, Gardiennet E, Bonacorsi S, Carol A, Carcelain G, Villemonteix J, Boukli N, Gozlan J, Morand-Joubert L, Legoff J, Delaugerre C, Chaix ML, Roque-Afonso AM, Dortet L, Naas T, Ronat JB, Lepape S, Marcelin AG, Descamps D
Performance of 30 commercial SARS-CoV-2 serology assays in testing symptomatic COVID-19 patients.
European Journal of Clinical Microbiology & Infectious Diseases: Official Publication of the European Society of Clinical Microbiology 2021, 40, 2235-2241.

Peiffer-Smadja N, Rozencwajg S, Kherabi Y, Yazdanpanah Y, Montravers P
COVID-19 vaccines: a race against time.
Anaesthesia, Critical Care & Pain Medicine 2021, 100848.

Amarsy R, Jacquier H, Munier AL, Merimèche M, Berçot B, Mégarbane B
Outbreak of NDM-1-producing Klebsiella pneumoniae in the intensive care unit during the COVID-19 pandemic: Another nightmare.
American Journal of Infection Control 2021, 49, 1324-1326.

Gastli N, Loubinoux J, Daragon M, Lavigne JP, Saint-Sardos P, Pailhoriès H, Lemarié C, Benmansour H, d'Humières C, Broutin L, Dauwalder O, Levy M, Auger G, Kernéis S, Cattoir V, French FA-PP study group
Multicentric evaluation of BioFire FilmArray Pneumonia Panel for rapid bacteriological documentation of pneumonia.
Clinical Microbiology and Infection: The Official Publication of the European Society of Clinical Microbiology and Infectious Diseases 2021, 27, 1308-1314.

Caméléna F, Moy AC, Dudoignon E, Poncin T, Deniau B, Guillemet L, Le Goff J, Budoo M, Benyamina M, Chaussard M, Coutrot M, Lafaurie M, Plaud B, Mebazaa A, Depret F, Berçot B
Performance of a multiplex polymerase chain reaction panel for identifying bacterial pathogens causing pneumonia in critically ill patients with COVID-19.
Diagnostic Microbiology and Infectious Disease 2021, 99, 115183.

Caméléna F, Poncin T, Dudoignon E, Salmona M, Le Goff J, Donay JL, Lafaurie M, Darmon M, Azoulay E, Plaud B, Mebazaa A, Dépret F, Jacquier H, Berçot B
Rapid identification of bacteria from respiratory samples of patients hospitalized in intensive care units, with FilmArray Pneumonia Panel Plus.
International journal of infectious diseases: IJID: official publication of the International Society for Infectious Diseases 2021, 108, 568-573.

Keta-Cov research group. Electronic address: vincent.mallet@aphp.fr, Keta-Cov research group
Intravenous ketamine and progressive cholangiopathy in COVID-19 patients.
Journal of Hepatology 2021, 74, 1243-1244.

Mallet V, Keta-Cov research group
Reply to: "Progressive cholangiopathy in COVID-19 patients: Other possible diagnoses than ketamine-induced cholangiopathy should be considered".
Journal of Hepatology 2021, 75, 990-992.

Grall I, Alloui CA, Tandjaoui-Lambiotte Y, Deslandes A, Seytre D, Chappe J, Carbonnelle E, Brichler S, Jacolot A, Zahar JR, Lomont A
Viral transmission in asymptomatic cases of SARS-CoV-2 infection.
The Journal of Infection 2021, 82, 282-327.

Tubiana S, Burdet C, Houhou N, Thy M, Manchon P, Blanquart F, Charpentier C, Guedj J, Alavoine L, Behillil S, Leclercq A, Lucet JC, Yazdanpanah Y, Attia M, Demeret C, Rose T, Bielicki JA, Bruijning-Verhagen P, Goossens H, Descamps D, van der Werf S, Lina B, Duval X, CoVCONTACT study group, Principal investigator, Sponsor: Inserm
High-risk exposure without personal protective equipment and infection with SARS-CoV-2 in-hospital workers - The CoV-CONTACT cohort.
The Journal of Infection 2021, 82, 186-230.

CORIMUNO-19 Collaborative group
Effect of anakinra versus usual care in adults in hospital with COVID-19 and mild-to-moderate pneumonia (CORIMUNO-ANA-1): a randomised controlled trial.
The Lancet. Respiratory Medicine 2021, 9, 295-304.

Lebreton G, Schmidt M, Ponnaiah M, Folliguet T, Para M, Guihaire J, Lansac E, Sage E, Cholley B, Mégarbane B, Cronier P, Zarka J, Da Silva D, Besset S, Lacombat I, Mongardon N, Richard C, Duranteau J, Cerf C, Saiydoun G, Sonneville R, Chiche JD, Nataf P, Longrois D, Combes A, Leprince P, Paris ECMO-COVID-19 investigators
Extracorporeal membrane oxygenation network organisation and clinical outcomes during the COVID-19 pandemic in Greater Paris, France: a multicentre cohort study.
The Lancet. Respiratory Medicine 2021

Ehrmann S, Li J, Ibarra-Estrada M, Perez Y, Pavlov I, McNicholas B, Roca O, Mirza S, Vines D, Garcia-Salcido R, Aguirre-Avalos G, Trump MW, Nay MA, Dellamonica J, Nseir S, Mogri I, Cosgrave D, Jayaraman D, Masclans JR, Laffey JG, Tavernier E, Awake Prone Positioning Meta-Trial Group
Awake prone positioning for COVID-19 acute hypoxaemic respiratory failure: a randomised, controlled, multinational, open-label meta-trial.
The Lancet. Respiratory Medicine 2021, 9, 1387-1395.

Driouich JS, Cochin M, Lingas G, Moureau G, Touret F, Petit PR, Piorkowski G, Barthélémy K, Laprie C, Coutard B, Guedj J, de Lamballerie X, Solas C, Nougairède A
Favipiravir antiviral efficacy against SARS-CoV-2 in a hamster model.
Nature Communications 2021, 12, 1735.

Bergwerk M, Gonen T, Lustig Y, Amit S, Lipsitch M, Cohen C, Mandelboim M, Levin EG, Rubin C, Indenbaum V, Tal I, Zavitan M, Zuckerman N, Bar-Chaim A, Kreiss Y, Regev-Yochay G
Covid-19 Breakthrough Infections in Vaccinated Health Care Workers.
The New England Journal of Medicine 2021

Poline J, Gaschignard J, Leblanc C, Madhi F, Foucaud E, Nattes E, Faye A, Bonacorsi S, Mariani P, Varon E, Smati-Lafarge M, Caseris M, Basmaci R, Lachaume N, Ouldali N
Systematic Severe Acute Respiratory Syndrome Coronavirus 2 Screening at Hospital Admission in Children: A French Prospective Multicenter Study.
Clinical Infectious Diseases: An Official Publication of the Infectious Diseases Society of America 2021, 72, 2215-2217.

Dudoignon E, Caméléna F, Deniau B, Habay A, Coutrot M, Ressaire Q, Plaud B, Berçot B, Dépret F
Bacterial Pneumonia in COVID-19 Critically Ill Patients: A Case Series.
Clinical Infectious Diseases: An Official Publication of the Infectious Diseases Society of America 2021, 72, 905-906.

Zucman N, Uhel F, Descamps D, Roux D, Ricard JD
Severe Reinfection With South African Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) Variant 501Y.V2.
Clinical Infectious Diseases: An Official Publication of the Infectious Diseases Society of America 2021, 73, 1945-1946.

Tarhini H, Recoing A, Bridier-Nahmias A, Rahi M, Lambert C, Martres P, Lucet JC, Rioux C, Bouzid D, Lebourgeois S, Descamps D, Yazdanpanah Y, Le Hingrat Q, Lescure FX, Visseaux B
Long-Term Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) Infectiousness Among Three Immunocompromised Patients: From Prolonged Viral Shedding to SARS-CoV-2 Superinfection.
The Journal of Infectious Diseases 2021, 223, 1522-1527.

Lê MP, Peiffer-Smadja N, Guedj J, Neant N, Mentré F, Ader F, Yazdanpanah Y, Peytavin G, C21DFSC
Rationale of a loading dose initiation for hydroxychloroquine treatment in COVID-19 infection in the DisCoVeRy trial-authors' response.
The Journal of Antimicrobial Chemotherapy 2021, 76, 277-279.

Bouzid D, Casalino E, Mullaert J, Laurent O, Duval X, Lescure FX, Peiffer Smadja N, Tubiana S, Armand Lefèvre L, Descamps D, Fidouh N, Choquet C, Lucet JC, Visseaux B
Added value of rapid respiratory syndromic testing at point of care versus central laboratory testing: a controlled clinical trial.
The Journal of Antimicrobial Chemotherapy 2021, 76, iii20-iii27.

Hogan J, Kwon T, Paye-Jaouen A, Fait C, Cointe A, Baudouin V
Kidney Transplantation in a COVID-19 Positive Pediatric Recipient.
Transplantation 2021

Bastard P, Gervais A, Le Voyer T, Rosain J, Philippot Q, Manry J, Michailidis E, Hoffmann HH, Eto S, Garcia-Prat M, Bizien L, Parra-Martínez A, Yang R, Haljasmägi L, Migaud M, Särekannu K, Maslovskaja J, de Prost N, Tandjaoui-Lambiotte Y, Luyt CE, Amador-Borrero B, Gaudet A, Poissy J, Morel P, Richard P, Cognasse F, Troya J, Trouillet-Assant S, Belot A, Saker K, Garçon P, Rivière JG, Lagier JC, Gentile S, Rosen LB, Shaw E, Morio T, Tanaka J, Dalmau D, Tharaux PL, Sene D, Stepanian A, Megarbane B, Triantafyllia V, Fekkar A, Heath JR, Franco JL, Anaya JM, Solé-Violán J, Imberti L, Biondi A, Bonfanti P, Castagnoli R, Delmonte OM, Zhang Y, Snow AL, Holland SM, Biggs C, Moncada-Vélez M, Arias AA, Lorenzo L, Boucherit S, Coulibaly B, Anglicheau D, Planas AM, Haerynck F, Duvlis S, Nussbaum RL, Ozcelik T, Keles S, Bousfiha AA, El Bakkouri J, Ramirez-Santana C, Paul S, Pan-Hammarström Q, Hammarström L, Dupont A, Kurolap A, Metz CN, Aiuti A, Casari G, Lampasona V, Ciceri F, Barreiros LA, Dominguez-Garrido E, Vidigal M, Zatz M, van de Beek D, Sahanic S, Tancevski I, Stepanovskyy Y, Boyarchuk O, Nukui Y, Tsumura M, Vidaur L, Tangye SG, Burrel S, Duffy D, Quintana-Murci L, Klocperk A, Kann NY, Shcherbina A, Lau YL, Leung D, Coulongeat M, Marlet J, Koning R, Reyes LF, Chauvineau-Grenier A, Venet F, Monneret G, Nussenzweig MC, Arrestier R, Boudhabhay I, Baris-Feldman H, Hagin D, Wauters J, Meyts I, Dyer AH, Kennelly SP, Bourke NM, Halwani R, Sharif-Askari NS, Dorgham K, Sallette J, Sedkaoui SM, AlKhater S, Rigo-Bonnin R, Morandeira F, Roussel L, Vinh DC, Ostrowski SR, Condino-Neto A, Prando C, Bonradenko A, Spaan AN, Gilardin L, Fellay J, Lyonnet S, Bilguvar K, Lifton RP, Mane S, HGID Lab, COVID Clinicians, COVID-STORM Clinicians, NIAID Immune Response to COVID Group, NH-COVAIR Study Group, Danish CHGE, Danish Blood Donor Study, St. James's Hospital, SARS CoV2 Interest group, French COVID Cohort Study Group, Imagine COVID-Group, Milieu Intérieur Consortium, CoV-Contact Cohort, Amsterdam UMC Covid-19, Biobank Investigators, COVID Human Genetic Effort, CONSTANCES cohort, 3C-Dijon Study, Cerba Health-Care, Etablissement du Sang study group, Anderson MS, Boisson B, Béziat V, Zhang SY, Vandreakos E, Hermine O, Pujol A, Peterson P, Mogensen TH, Rowen L, Mond J, Debette S, de Lamballerie X, Duval X, Mentré F, Zins M, Soler-Palacin P, Colobran R, Gorochov G, Solanich X, Susen S, Martinez-Picado J, Raoult D, Vasse M, Gregersen PK, Piemonti L, Rodríguez-Gallego C, Notarangelo LD, Su HC, Kisand K, Okada S, Puel A, Jouanguy E, Rice CM, Tiberghien P, Zhang Q, Cobat A, Abel L, Casanova JL
Autoantibodies neutralizing type I IFNs are present in ~4% of uninfected individuals over 70 years old and account for ~20% of COVID-19 deaths.
Science Immunology 2021, 6, eabl4340.

Asano T, Boisson B, Onodi F, Matuozzo D, Moncada-Velez M, Maglorius Renkilaraj MRL, Zhang P, Meertens L, Bolze A, Materna M, Korniotis S, Gervais A, Talouarn E, Bigio B, Seeleuthner Y, Bilguvar K, Zhang Y, Neehus AL, Ogishi M, Pelham SJ, Le Voyer T, Rosain J, Philippot Q, Soler-Palacín P, Colobran R, Martin-Nalda A, Rivière JG, Tandjaoui-Lambiotte Y, Chaïbi K, Shahrooei M, Darazam IA, Olyaei NA, Mansouri D, Hatipoğlu N, Palabiyik F, Ozcelik T, Novelli G, Novelli A, Casari G, Aiuti A, Carrera P, Bondesan S, Barzaghi F, Rovere-Querini P, Tresoldi C, Franco JL, Rojas J, Reyes LF, Bustos IG, Arias AA, Morelle G, Christèle K, Troya J, Planas-Serra L, Schlüter A, Gut M, Pujol A, Allende LM, Rodriguez-Gallego C, Flores C, Cabrera-Marante O, Pleguezuelo DE, de Diego RP, Keles S, Aytekin G, Akcan OM, Bryceson YT, Bergman P, Brodin P, Smole D, Smith CIE, Norlin AC, Campbell TM, Covill LE, Hammarström L, Pan-Hammarström Q, Abolhassani H, Mane S, Marr N, Ata M, Al Ali F, Khan T, Spaan AN, Dalgard CL, Bonfanti P, Biondi A, Tubiana S, Burdet C, Nussbaum R, Kahn-Kirby A, Snow AL, COVID Human Genetic Effort, COVID-STORM Clinicians, COVID Clinicians, Imagine COVID Group, French COVID Cohort Study Group, CoV-Contact Cohort, Amsterdam UMC Covid-, Biobank, NIAID-USUHS COVID Study Group, Bustamante J, Puel A, Boisson-Dupuis S, Zhang SY, Béziat V, Lifton RP, Bastard P, Notarangelo LD, Abel L, Su HC, Jouanguy E, Amara A, Soumelis V, Cobat A, Zhang Q, Casanova JL
X-linked recessive TLR7 deficiency in ~1% of men under 60 years old with life-threatening COVID-19.
Science Immunology 2021, 6, eabl4348.

Voiriot G, Fartoukh M, Durand-Zaleski I, Berard L, Rousseau A, Armand-Lefevre L, Verdet C, Argaud L, Klouche K, Megarbane B, Patrier J, Richard JC, Reignier J, Schwebel C, Souweine B, Tandjaoui-Lambiotte Y, Simon T, Timsit JF, MULTI-CAP study group
Combined use of a broad-panel respiratory multiplex PCR and procalcitonin to reduce duration of antibiotics exposure in patients with severe community-acquired pneumonia (MULTI-CAP): a multicentre, parallel-group, open-label, individual randomised trial conducted in French intensive care units.
BMJ open 2021, 11, e048187.

Tavernier E, Barbier F, Meziani F, Quenot JP, Herbrecht JE, Landais M, Roux D, Seguin P, Schnell D, Veinstein A, Veber B, Lasocki S, Lu Q, Beduneau G, Ferrandiere M, Dahyot-Fizelier C, Plantefeve G, Nay MA, Merdji H, Andreu P, Vecellio L, Muller G, Cabrera M, Le Pennec D, Respaud R, Lanotte P, Gregoire N, Leclerc M, Helms J, Boulain T, Lacherade JC, Ehrmann S, REVA network and the CRICS-TRIGGESEP F-CRIN network
Inhaled amikacin versus placebo to prevent ventilator-associated pneumonia: the AMIKINHAL double-blind multicentre randomised controlled trial protocol.
BMJ open 2021, 11, e048591.

Passemard S, Faye A, Dubertret C, Peyre H, Vorms C, Boimare V, Auvin S, Flamant M, Ruszniewski P, Ricard JD
Covid-19 crisis impact on the next generation of physicians: a survey of 800 medical students.
BMC medical education 2021, 21, 529.

COVID-ICU group, for the REVA network, COVID-ICU investigators
Benefits and risks of noninvasive oxygenation strategy in COVID-19: a multicenter, prospective cohort study (COVID-ICU) in 137 hospitals.
Critical Care (London, England) 2021, 25, 421.

Bonnet N, Martin O, Boubaya M, Levy V, Ebstein N, Karoubi P, Tandjaoui-Lambiotte Y, Van Der Meersch G, Oziel J, Soulie M, Ghalayini M, Winchenne A, Zahar JR, Ahmed P, Gaudry S, Cohen Y
High flow nasal oxygen therapy to avoid invasive mechanical ventilation in SARS-CoV-2 pneumonia: a retrospective study.
Annals of Intensive Care 2021, 11, 37.

Dres M, Hajage D, Lebbah S, Kimmoun A, Pham T, Béduneau G, Combes A, Mercat A, Guidet B, Demoule A, Schmidt M, COVID-ICU investigators
Characteristics, management, and prognosis of elderly patients with COVID-19 admitted in the ICU during the first wave: insights from the COVID-ICU study : Prognosis of COVID-19 elderly critically ill patients in the ICU.
Annals of Intensive Care 2021, 11, 77.

Chelly J, Plantefève G, Kamel T, Bruel C, Nseir S, Lai C, Cirillo G, Skripkina E, Ehrminger S, Berdaguer-Ferrari FD, Le Marec J, Paul M, Autret A, Deye N, ACICOVID-19 study group
Incidence, clinical characteristics, and outcome after unexpected cardiac arrest among critically ill adults with COVID-19: insight from the multicenter prospective ACICOVID-19 registry.
Annals of Intensive Care 2021, 11, 155.

Schmidt M, Guidet B, Demoule A, Ponnaiah M, Fartoukh M, Puybasset L, Combes A, Hajage D, COVID-ICU Investigators
Predicting 90-day survival of patients with COVID-19: Survival of Severely Ill COVID (SOSIC) scores.
Annals of Intensive Care 2021, 11, 170.

Massart N, Maxime V, Fillatre P, Razazi K, Ferré A, Moine P, Legay F, Voiriot G, Amara M, Santi F, Nseir S, Marque-Juillet S, Bounab R, Barbarot N, Bruneel F, Luyt CE, COVID ICU Bacteremia Study Group on behalf of the COVID-ICU Investigators
Characteristics and prognosis of bloodstream infection in patients with COVID-19 admitted in the ICU: an ancillary study of the COVID-ICU study.
Annals of Intensive Care 2021, 11, 183.

Czuppon P, Débarre F, Gonçalves A, Tenaillon O, Perelson AS, Guedj J, Blanquart F
Success of prophylactic antiviral therapy for SARS-CoV-2: Predicted critical efficacies and impact of different drug-specific mechanisms of action.
PLoS computational biology 2021, 17, e1008752.

d'Humières C, Patrier J, Lortat-Jacob B, Tran-Dinh A, Chemali L, Maataoui N, Rondinaud E, Ruppé E, Burdet C, Ruckly S, Montravers P, Timsit JF, Armand-Lefevre L
Two original observations concerning bacterial infections in COVID-19 patients hospitalized in intensive care units during the first wave of the epidemic in France.
PloS One 2021, 16, e0250728.

Charbonnier L, Rouprêt-Serzec J, Caseris M, Danse M, Cointe A, Cohen L, Faye A, Ouldali N, Gaschignard J
Contribution of Serological Rapid Diagnostic Tests to the Strategy of Contact Tracing in Households Following SARS-CoV-2 Infection Diagnosis in Children.
Frontiers in Pediatrics 2021, 9, 638502.

Peiffer-Smadja N, Bridier-Nahmias A, Ferré VM, Charpentier C, Garé M, Rioux C, Allemand A, Lavallée P, Ghosn J, Kramer L, Descamps D, Yazdanpanah Y, Visseaux B
Emergence of E484K Mutation Following Bamlanivimab Monotherapy among High-Risk Patients Infected with the Alpha Variant of SARS-CoV-2.
Viruses 2021, 13, 1642.

Stilma W, Åkerman E, Artigas A, Bentley A, Bos LD, Bosman TJC, de Bruin H, Brummaier T, Buiteman-Kruizinga LA, Carcò F, Chesney G, Chu C, Dark P, Dondorp AM, Gijsbers HJH, Gilder ME, Grieco DL, Inglis R, Laffey JG, Landoni G, Lu W, Maduro LMN, McGready R, McNicholas B, de Mendoza D, Morales-Quinteros L, Nosten F, Papali A, Paternoster G, Paulus F, Pisani L, Prud'homme E, Ricard JD, Roca O, Sartini C, Scaravilli V, Schultz MJ, Sivakorn C, Spronk PE, Sztajnbok J, Trigui Y, Vollman KM, van der Woude MCE
Awake Proning as an Adjunctive Therapy for Refractory Hypoxemia in Non-Intubated Patients with COVID-19 Acute Respiratory Failure: Guidance from an International Group of Healthcare Workers.
The American Journal of Tropical Medicine and Hygiene 2021

Marc A, Kerioui M, Blanquart F, Bertrand J, Mitjà O, Corbacho-Monné M, Marks M, Guedj J
Quantifying the relationship between SARS-CoV-2 viral load and infectiousness.
eLife 2021, 10, e69302.

 2020                                                                            

Dequin PF, Heming N, Meziani F, Plantefève G, Voiriot G, Badié J, François B, Aubron C, Ricard JD, Ehrmann S, Jouan Y, Guillon A, Leclerc M, Coffre C, Bourgoin H, Lengellé C, Caille-Fénérol C, Tavernier E, Zohar S, Giraudeau B, Annane D, Le Gouge A, CAPE COVID Trial Group and the CRICS-TriGGERSep Network
Effect of Hydrocortisone on 21-Day Mortality or Respiratory Support Among Critically Ill Patients With COVID-19: A Randomized Clinical Trial.
JAMA 2020, 324, 1298-1306.

Moszkowicz D, Duboc H, Dubertret C, Roux D, Bretagnol F
Daily medical education for confined students during coronavirus disease 2019 pandemic: A simple videoconference solution.
Clinical Anatomy (New York, N.Y.) 2020, 33, 927-928.

Zucman N, Mullaert J, Roux D, Roca O, Ricard JD, Contributors
Prediction of outcome of nasal high flow use during COVID-19-related acute hypoxemic respiratory failure.
Intensive Care Medicine 2020, 46, 1924-1926.

Deslandes A, Berti V, Tandjaoui-Lambotte Y, Alloui C, Carbonnelle E, Zahar JR, Brichler S, Cohen Y
SARS-CoV-2 was already spreading in France in late December 2019.
International Journal of Antimicrobial Agents 2020, 55, 106006.

Peyrony O, Ellouze S, Fontaine JP, Thegat-Le Cam M, Salmona M, Feghoul L, Mahjoub N, Mercier-Delarue S, Gabassi A, Delaugerre C, Le Goff J, Saint-Louis CORE (COvid REsearch) group
Surfaces and equipment contamination by severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) in the emergency department at a university hospital.
International Journal of Hygiene and Environmental Health 2020, 230, 113600.

Le Breton C, Besset S, Freita-Ramos S, Amouretti M, Billiet PA, Dao M, Dumont LM, Federici L, Gaborieau B, Longrois D, Postel-Vinay P, Vuillard C, Zucman N, Lebreton G, Combes A, Dreyfuss D, Ricard JD, Roux D
Extracorporeal membrane oxygenation for refractory COVID-19 acute respiratory distress syndrome.
Journal of Critical Care 2020, 60, 10-12.

Nguyen Y, Corre F, Honsel V, Curac S, Zarrouk V, Fantin B, Galy A
Applicability of the CURB-65 pneumonia severity score for outpatient treatment of COVID-19.
The Journal of Infection 2020, 81, e96-e98.

Garrigues E, Janvier P, Kherabi Y, Le Bot A, Hamon A, Gouze H, Doucet L, Berkani S, Oliosi E, Mallart E, Corre F, Zarrouk V, Moyer JD, Galy A, Honsel V, Fantin B, Nguyen Y
Post-discharge persistent symptoms and health-related quality of life after hospitalization for COVID-19.
The Journal of Infection 2020, 81, e4-e6.

Amarsy R, Pean de Ponfilly GR, Benmansour HA, Jacquier H, Cambau EE, Mégarbane B
Serratia marcescens outbreak in the intensive care unit during the COVID-19 pandemic: A paradoxical risk?.
Medecine Et Maladies Infectieuses 2020, 50, 750-751.

Ouldali N, Pouletty M, Mariani P, Beyler C, Blachier A, Bonacorsi S, Danis K, Chomton M, Maurice L, Le Bourgeois F, Caseris M, Gaschignard J, Poline J, Cohen R, Titomanlio L, Faye A, Melki I, Meinzer U
Emergence of Kawasaki disease related to SARS-CoV-2 infection in an epicentre of the French COVID-19 epidemic: a time-series analysis.
The Lancet. Child & Adolescent Health 2020, 4, 662-668.

Nguyen Y, Corre F, Honsel V, Curac S, Zarrouk V, Burtz CP, Weiss E, Moyer JD, Gauss T, Grégory J, Bert F, Trichet C, Peoc'h K, Vilgrain V, Rebours V, Fantin B, Galy A
A nomogram to predict the risk of unfavourable outcome in COVID-19: a retrospective cohort of 279 hospitalized patients in Paris area.
Annals of Medicine 2020, 52, 367-375.

Kauv J, Lê MP, Veyrier M, Le Hingrat Q, Visseaux B, Massias L, Chauveheid MP, Descamps D, Ghosn J, Peytavin G
Failure of hydroxychloroquine pre-exposure prophylaxis in COVID-19 infection? A case report.
The Journal of Antimicrobial Chemotherapy 2020, 75, 2706-2707.

Lê MP, Le Hingrat Q, Jaquet P, Wicky PH, Bunel V, Massias L, Visseaux B, Messika J, Descamps D, Mal H, Timsit JF, Peytavin G
Removal of Remdesivir's Metabolite GS-441524 by Hemodialysis in a Double Lung Transplant Recipient with COVID-19.
Antimicrobial Agents and Chemotherapy 2020, 64,

Lê MP, Le Beller C, Le Hingrat Q, Jaquet P, Wicky PH, Bunel V, Massias L, Visseaux B, Messika J, Descamps D, Mal H, Timsit JF, Peytavin G
Reply to Yan and Muller, "Captisol and GS-704277, but Not GS-441524, Are Credible Mediators of Remdesivir's Nephrotoxicity".
Antimicrobial Agents and Chemotherapy 2020, 64,

Pouletty M, Borocco C, Ouldali N, Caseris M, Basmaci R, Lachaume N, Bensaid P, Pichard S, Kouider H, Morelle G, Craiu I, Pondarre C, Deho A, Maroni A, Oualha M, Amoura Z, Haroche J, Chommeloux J, Bajolle F, Beyler C, Bonacorsi S, Carcelain G, Koné-Paut I, Bader-Meunier B, Faye A, Meinzer U, Galeotti C, Melki I
Paediatric multisystem inflammatory syndrome temporally associated with SARS-CoV-2 mimicking Kawasaki disease (Kawa-COVID-19): a multicentre cohort.
Annals of the Rheumatic Diseases 2020, 79, 999-1006.

Ouldali N, Pouletty M, Lokmer J, Benzouid C, Beyler C, Deho A, Meinzer U, Faye A, Melki I, Great Paris Region (GPR) Kawa-COVID-19 consortium
Response to: 'Correspondence on 'Paediatric multisystem inflammatory syndrome temporally associated with SARS-CoV-2 mimicking Kawasaki disease (Kawa-COVID-19): a multicentre cohort' by Pouletty et al' by Pino et al.
Annals of the Rheumatic Diseases 2020, annrheumdis-2020-218614.

Pouletty M, Dingulu G, Ouldali N, Corseri O, Ducrocq C, Meinzer U, Faye A, Galeotti C, Melki I, GPR(KC1c
Response to: 'Exaggerated neutrophil extracellular trap formation in Kawasaki disease: a key phenomenon behind the outbreak in western countries?' by Yamashita et al.
Annals of the Rheumatic Diseases 2020

Mahévas M, Tran VT, Roumier M, Chabrol A, Paule R, Guillaud C, Fois E, Lepeule R, Szwebel TA, Lescure FX, Schlemmer F, Matignon M, Khellaf M, Crickx E, Terrier B, Morbieu C, Legendre P, Dang J, Schoindre Y, Pawlotsky JM, Michel M, Perrodeau E, Carlier N, Roche N, de Lastours V, Ourghanlian C, Kerneis S, Ménager P, Mouthon L, Audureau E, Ravaud P, Godeau B, Gallien S, Costedoat-Chalumeau N
Clinical efficacy of hydroxychloroquine in patients with covid-19 pneumonia who require oxygen: observational comparative study using routine care data.
BMJ 2020, m1844.

Ong CWM, Migliori GB, Raviglione M, MacGregor-Skinner G, Sotgiu G, Alffenaar JW, Tiberi S, Adlhoch C, Alonzi T, Archuleta S, Brusin S, Cambau E, Capobianchi MR, Castilletti C, Centis R, Cirillo DM, D'Ambrosio L, Delogu G, Esposito SMR, Figueroa J, Friedland JS, Ho BCH, Ippolito G, Jankovic M, Kim HY, Rosales Klintz S, Ködmön C, Lalle E, Leo YS, Leung CC, Märtson AG, Melazzini MG, Najafi Fard S, Penttinen P, Petrone L, Petruccioli E, Pontali E, Saderi L, Santin M, Spanevello A, van Crevel R, van der Werf MJ, Visca D, Viveiros M, Zellweger JP, Zumla A, Goletti D
Epidemic and pandemic viral infections: impact on tuberculosis and the lung: A consensus by the World Association for Infectious Diseases and Immunological Disorders (WAidid), Global Tuberculosis Network (GTN), and members of the European Society of Clinical Microbiology and Infectious Diseases Study Group for Mycobacterial Infections (ESGMYC).
The European Respiratory Journal 2020, 56,

Lomont A, Boubaya M, Khamis W, Deslandes A, Cordel H, Seytre D, Alloui C, Malaure C, Bonnet N, Carbonnelle E, Cohen Y, Nunes H, Bouchaud O, Zahar JR, Tandjaoui-Lambiotte Y
Environmental contamination related to SARS-CoV-2 in ICU patients.
ERJ open research 2020

Peiffer-Smadja N, Bouadma L, Mathy V, Allouche K, Patrier J, Reboul M, Montravers P, Timsit JF, Armand-Lefevre L
Performance and impact of a multiplex PCR in ICU patients with ventilator-associated pneumonia or ventilated hospital-acquired pneumonia.
Critical Care (London, England) 2020, 24, 366.

Monard C, Pehlivan J, Auger G, Alviset S, Tran Dinh A, Duquaire P, Gastli N, d'Humières C, Maamar A, Boibieux A, Baldeyrou M, Loubinoux J, Dauwalder O, Cattoir V, Armand-Lefèvre L, Kernéis S, ADAPT study group
Multicenter evaluation of a syndromic rapid multiplex PCR test for early adaptation of antimicrobial therapy in adult patients with pneumonia.
Critical Care (London, England) 2020, 24, 434.

Sangare A, Dong A, Valente M, Pyatigorskaya N, Cao A, Altmayer V, Zyss J, Lambrecq V, Roux D, Morlon Q, Perez P, Ben Salah A, Virolle S, Puybasset L, Sitt JD, Rohaut B, Naccache L
Neuroprognostication of Consciousness Recovery in a Patient with COVID-19 Related Encephalitis: Preliminary Findings from a Multimodal Approach.
Brain Sciences 2020, 10,


IAME exhaustive list of publications


(click to expand or collapse)

 2024                                                                            

Lavalley-Morelle A, Peiffer-Smadja N, Gressens SB, Souhail B, Lahens A, Bounhiol A, Lescure FX, Mentré F, Mullaert J
Multivariate joint model under competing risks to predict death of hospitalized patients for SARS-CoV-2 infection.
Biometrical Journal. Biometrische Zeitschrift 2024, 66, e2300049.

Lingas G, Planas D, Péré H, Porrot F, Guivel-Benhassine F, Staropoli I, Duffy D, Chapuis N, Gobeaux C, Veyer D, Delaugerre C, Le Goff J, Getten P, Hadjadj J, Bellino A, Parfait B, Treluyer JM, Schwartz O, Guedj J, Kernéis S, Terrier B
Neutralizing Antibody Levels as a Correlate of Protection Against SARS-CoV-2 Infection: A Modeling Analysis.
Clinical Pharmacology and Therapeutics 2024, 115, 86-94.

Gonçalves A, Marchand M, Chan P, Jin JY, Guedj J, Bruno R
Comparison of two-stage and joint TGI-OS modeling using data from six atezolizumab clinical studies in patients with metastatic non-small cell lung cancer.
CPT: pharmacometrics & systems pharmacology 2024, 13, 68-78.

Battaglini D, White NM, Premraj L, Wanjiru Citarella B, Merson L, Robba C, Thomson D, Cho SM, ISARIC Clinical Characterization Group
Long-term neurological symptoms after acute COVID-19 illness requiring hospitalization in adult patients: insights from the ISARIC-COVID-19 follow-up study.
Journal of Neurology 2024, 271, 79-86.

Bichali S, Ouldali N, Godart F, Maboudou P, Houeijeh A, Leteurtre S
NT-proBNP course during MIS-C post-COVID-19: an observational study.
European Journal of Pediatrics 2024

Chatzakis C, Shahar-Nissan K, Faure-Bardon V, Picone O, Hadar E, Amir J, Egloff C, Vivanti A, Sotiriadis A, Leruez-Ville M, Ville Y
The effect of valacyclovir on secondary prevention of congenital cytomegalovirus infection, following primary maternal infection acquired periconceptionally or in the first trimester of pregnancy. An individual patient data meta-analysis.
American Journal of Obstetrics and Gynecology 2024, 230, 109-117.e2.

Assad Z, Valtuille Z, Rybak A, Kaguelidou F, Lazzati A, Varon E, Pham LL, Lenglart L, Faye A, Caseris M, Cohen R, Levy C, Vabret A, Gravey F, Angoulvant F, Koehl B, Ouldali N
Unique Changes in the Incidence of Acute Chest Syndrome in Children With Sickle Cell Disease Unravel the Role of Respiratory Pathogens: A Time Series Analysis.
Chest 2024, 165, 150-160.

Maillard A, Jeanmougin P, Bouvet E, Lariven S, Le Bel J, Delory T
Fluoroquinolones in primary care, a first step for patient empowerment towards antimicrobial stewardship?.
Clinical Microbiology and Infection: The Official Publication of the European Society of Clinical Microbiology and Infectious Diseases 2024, 30, 7-9.

Lavalley-Morelle A, Mentré F, Comets E, Mullaert J
Extending the code in the open-source saemix package to fit joint models of longitudinal and time-to-event data.
Computer Methods and Programs in Biomedicine 2024, 247, 108095.

Siempos II, Kalil AC, Belhadi D, Veiga VC, Cavalcanti AB, Branch-Elliman W, Papoutsi E, Gkirgkiris K, Xixi NA, Kotanidou A, Hermine O, Porcher R, Mariette X, CORIMUNO-19 Collaborative Group, DisCoVeRy Study Group, ACTT-2 Study Group, ACTT-3 Study Group
Immunomodulators for immunocompromised patients hospitalized for COVID-19: a meta-analysis of randomized controlled trials.
EClinicalMedicine 2024, 69, 102472.

David M, Paule Gueye H, Moustapha Drame M, Sibiude J, Penager C, Janky E, Mandelbrot L, Hcini N
Twice-daily versus once-daily vaginal dinoprostone gel for induction of labor at term: A randomized controlled trial.
European Journal of Obstetrics, Gynecology, and Reproductive Biology 2024, 292, 107-111.

Sentilhes L, Schmitz T, Arthuis C, Barjat T, Berveiller P, Camilleri C, Froeliger A, Garabedian C, Guerby P, Korb D, Lecarpentier E, Mattuizzi A, Sibiude J, Sénat MV, Tsatsaris V
[Preeclampsia: Guidelines for clinical practice from the French College of Obstetricians and Gynecologists].
Gynecologie, Obstetrique, Fertilite & Senologie 2024, 52, 3-44.

S V, P M, J S, C G, N S
[Prevention of Rh D Alloimmunization in the first trimester of the pregnancy: French College of Obstetricians and Gynecologists guidelines for clinical practice].
Gynecologie, obstetrique, fertilite & senologie 2024

Vauloup-Fellous C, Peyronnet V, Portet-Sulla V, Picone O
[How I do … interpret CMV serology during pregnancy?].
Gynecologie, Obstetrique, Fertilite & Senologie 2024, S2468-7189(24)00116-8.

Polivka L, Madrange M, Bulai-Livideanu C, Barete S, Ballul T, Neuraz A, Greco C, Agopian J, Brenet F, Dubreuil P, Burdet C, Lemal R, Tournilhac O, Terriou L, Launay D, Bouillet L, Gourguechon C, Damaj G, Frenzel L, Meni C, Bouktit H, Collange AF, Gaudy-Marqueste C, Gousseff M, Le Mouel E, Hamidou M, Neel A, Ranta D, Jaussaud R, Guilpain P, Canioni D, Molina TJ, Bruneau J, Lhermitte L, Garcelon N, Javier RM, Pelletier F, Castelain F, Retornaz F, Cabrera Q, Zunic P, Gourin MP, Wierzbicka-Hainaut E, Viallard JF, Lavigne C, Hoarau C, Durieu I, Heiblig M, Dimicoli-Salazar S, Torregrosa-Diaz JM, Soria A, Arock M, Lortholary O, Bodemer C, Hermine O, Rossignol J, CEREMAST network
Pathophysiologic implications of elevated prevalence of hereditary alpha-tryptasemia in all mastocytosis subtypes.
The Journal of Allergy and Clinical Immunology 2024, 153, 349-353.e4.

Castera L, Garteiser P, Laouenan C, Vidal-Trécan T, Vallet-Pichard A, Manchon P, Paradis V, Czernichow S, Roulot D, Larger E, Pol S, Bedossa P, Correas JM, Valla D, Gautier JF, Van Beers BE, QUID NASH investigators
Prospective head-to-head comparison of non-invasive scores for diagnosis of fibrotic MASH in patients with type 2 diabetes.
Journal of Hepatology 2024, S0168-8278(24)00206-X.

Hites M, Lapique EL, Massonnaud CR, Belhadi D, Jamard S, Goehringer F, Danion F, Reignier J, de Castro N, Garot D, Lacombe K, Tolsma V, Faure E, Malvy D, Staub T, Courjon J, Cazenave-Roblot F, Dyrhol Riise AM, Leturnier P, Martin-Blondel G, Roger C, Akinosoglou K, Moing VL, Piroth L, Sellier P, Lescure X, Trøseid M, Clevenbergh P, Dalgard O, Gallien S, Gousseff M, Loubet P, Vardon-Bounes F, Visée C, Belkhir L, Botelho-Nevers É, Cabié A, Kotanidou A, Lanternier F, Rouveix-Nordon E, Silva S, Thiery G, Poignard P, Carcelain G, Diallo A, Mercier N, Terzic V, Bouscambert-Duchamp M, Gaymard A, Trabaud MA, Destras G, Josset L, Billard N, Han THL, Guedj J, Couffin-Cadiergues S, Dechanet A, Delmas C, Esperou H, Fougerou-Leurent C, Mestre SL, Métois A, Noret M, Bally I, Dergan-Dylon S, Tubiana S, Kalif O, Bergaud N, Leveau B, Eustace J, Greil R, Hajdu E, Halanova M, Paiva JA, Piekarska A, Rodriguez Baño J, Tonby K, Trojánek M, Tsiodras S, Unal S, Burdet C, Costagliola D, Yazdanpanah Y, Peiffer-Smadja N, Mentré F, Ader F, DisCoVeRy study group
Tixagevimab-cilgavimab (AZD7442) for the treatment of patients hospitalized with COVID-19 (DisCoVeRy): A phase 3, randomized, double-blind, placebo-controlled trial.
The Journal of Infection 2024, 88, 106120.

Slaoui A, Cordier C, Lefevre-Morane E, Tessier V, Goffinet F, Le Ray C, Bourgeois-Moine A, Sibiude J, Laurent AC, Azria E
Impact of an e-learning training for interpreting intrapartum fetal heart rate monitoring to avoid perinatal asphyxia: A before-after multicenter observational study.
Journal of Gynecology Obstetrics and Human Reproduction 2024, 53, 102736.

Vivanti AJ, Couffignal C, Sibiude J, Cordier AG, Tsatsaris V, Rozenberg F, Launay O, Benachi A, De Luca D, Ancel PY, Marcault E, Ville Y, Carrara J, Luton D, Dommergues M, Borie C, Kayem G, Lecomte L, Leruez-Ville M, Périllaud-Dubois C, Biran V, Manchon P, Picone O, Vauloup-Fellous C
Maternal and neonatal outcomes of French prospective multicenter cohort study COVIPREG during the first two COVID-19 waves.
Journal of Gynecology Obstetrics and Human Reproduction 2024, 102764.

Fafi I, Assad Z, Lenglart L, Valtuille Z, Ouldali N
Evolution of respiratory syncytial virus burden in young children following the COVID-19 pandemic: influence of concomitant changes in testing practices.
The Lancet. Infectious Diseases 2024, 24, e216-e217.

Passaes C, Desjardins D, Chapel A, Monceaux V, Lemaitre J, Mélard A, Perdomo-Celis F, Planchais C, Gourvès M, Dimant N, David A, Dereuddre-Bosquet N, Barrail-Tran A, Gouget H, Guillaume C, Relouzat F, Lambotte O, Guedj J, Müller-Trutwin M, Mouquet H, Rouzioux C, Avettand-Fenoël V, Le Grand R, Sáez-Cirión A
Early antiretroviral therapy favors post-treatment SIV control associated with the expansion of enhanced memory CD8+ T-cells.
Nature Communications 2024, 15, 178.

Haviari S, Massonnaud CR, Dupont A
Recombinant Influenza Vaccine in Adults under 65 Years of Age.
The New England Journal of Medicine 2024, 390, 1155.

Mahmoud A, Pomar L, Lambert V, Picone O, Hcini N
Prenatal and Postnatal Ocular Abnormalities Following Congenital Zika Virus Infections: A Systematic Review.
Ocular Immunology and Inflammation 2024, 1-11.

Charmasson A, Ecollan M, Jaury P, Partouche H, Frachon A, Pinot J
Perceived impact of discussions with a healthcare professional on patients' decision regarding COVID-19 vaccine.
Human Vaccines & Immunotherapeutics 2024, 20, 2307735.

Bastard P, Gervais A, Taniguchi M, Saare L, Särekannu K, Le Voyer T, Philippot Q, Rosain J, Bizien L, Asano T, Garcia-Prat M, Parra-Martínez A, Migaud M, Tsumura M, Conti F, Belot A, Rivière JG, Morio T, Tanaka J, Javouhey E, Haerynck F, Duvlis S, Ozcelik T, Keles S, Tandjaoui-Lambiotte Y, Escoda S, Husain M, Pan-Hammarström Q, Hammarström L, Ahlijah G, Abi Haidar A, Soudee C, Arseguel V, Abolhassani H, Sahanic S, Tancevski I, Nukui Y, Hayakawa S, Chrousos GP, Michos A, Tatsi EB, Filippatos F, Rodriguez-Palmero A, Troya J, Tipu I, Meyts I, Roussel L, Ostrowski SR, Schidlowski L, Prando C, Condino-Neto A, Cheikh N, Bousfiha AA, El Bakkouri J, COVID Clinicians, GEN-COVID Study Group, COVID Human Genetic Effort, Peterson P, Pujol A, Lévy R, Quartier P, Vinh DC, Boisson B, Béziat V, Zhang SY, Borghesi A, Pession A, Andreakos E, Marr N, Mentis AFA, Mogensen TH, Rodríguez-Gallego C, Soler-Palacin P, Colobran R, Tillmann V, Neven B, Trouillet-Assant S, Brodin P, Abel L, Jouanguy E, Zhang Q, Martinón-Torres F, Salas A, Gómez-Carballa A, Gonzalez-Granado LI, Kisand K, Okada S, Puel A, Cobat A, Casanova JL
Higher COVID-19 pneumonia risk associated with anti-IFN-α than with anti-IFN-ω auto-Abs in children.
The Journal of Experimental Medicine 2024, 221, e20231353.

Cho SM, Premraj L, Battaglini D, Fanning JP, Suen J, Bassi GL, Fraser J, Robba C, Griffee M, Solomon T, Semple MG, Baillie K, Sigfrid L, Scott JT, Citarella BW, Merson L, Arora RC, Whitman G, Thomson D, White N, ISARIC Clinical Characterization Group
Sex differences in post-acute neurological sequelae of SARS-CoV-2 and symptom resolution in adults after coronavirus disease 2019 hospitalization: an international multi-centre prospective observational study.
Brain Communications 2024, 6, fcae036.

Moisset H, Rio J, Benhard J, Arnoult F, Deconinck L, Grall N, Iung B, Lescure X, Rouzet F, Suc G, Hoen B, Hobson CA, Duval X
Evaluation of the specificity of the 2023 Duke-International Society of Cardiovascular Infectious Diseases classification for infective endocarditis.
Clinical Infectious Diseases: An Official Publication of the Infectious Diseases Society of America 2024, ciae034.

Goehringer F, Lalloué B, Selton-Suty C, Alla F, Botelho-Nevers E, Chirouze C, Curlier E, El Hatimi S, Gagneux-Brunon A, le Moing V, Lim P, Piroth L, Strady C, Tribouilloy C, Virion JM, Agrinier N, Duval X, Hoen B, AEPEI - ObservatoireEI study group
Compared Performance of the 2023 Duke-International Society for Cardiovascular Infectious Diseases, the 2000 Modified Duke, and the 2015 ESC Criteria for the Diagnosis of Infective Endocarditis in a French Multicenter Prospective Cohort.
Clinical Infectious Diseases: An Official Publication of the Infectious Diseases Society of America 2024, ciae035.

Terzić V, Miantezila Basilua J, Billard N, de Gastines L, Belhadi D, Fougerou-Leurent C, Peiffer-Smadja N, Mercier N, Delmas C, Ferrane A, Dechanet A, Poissy J, Espérou H, Ader F, Hites M, Andrejak C, Greil R, Paiva JA, Staub T, Tacconelli E, Burdet C, Costagliola D, Mentré F, Yazdanpanah Y, Diallo A, DisCoVeRy study group
Cardiac Adverse Events and Remdesivir in Hospitalized Patients with Coronavirus Disease 2019 (COVID-19): A Post Hoc Safety Analysis of the Randomized DisCoVeRy Trial.
Clinical Infectious Diseases: An Official Publication of the Infectious Diseases Society of America 2024, ciae170.

El Hatimi S, Erpelding ML, Selton-Suty C, Botros JB, Goehringer F, Berthelot E, Elfarra M, Deconinck L, Para M, Provenchere S, Hoen B, Agrinier N, Duval X, Iung B
Predictive performance of surgical mortality risk scores in infective endocarditis.
European Journal of Cardio-Thoracic Surgery: Official Journal of the European Association for Cardio-Thoracic Surgery 2024, 65, ezad433.

Leterrier J, Iung B, de Tymoski C, Deconinck L, Para M, Duval X, Provenchere S, Mesnier J, Delhomme C, Haviari S, Urena M, Suc G
Sex differences, and outcomes in surgical Infective Endocarditis.
European Journal of Cardio-Thoracic Surgery: Official Journal of the European Association for Cardio-Thoracic Surgery 2024, ezae114.

Sokal A, Royer G, Esposito-Farese M, Clermont O, Condamine B, Laouénan C, Lefort A, Denamur E, de Lastours V, Colibafi, Septicoli and Coliville Groups
Clinical and bacteriological specificities of Escherichia coli bloodstream infections from biliary portal of entries.
The Journal of Infectious Diseases 2024, jiad586.

Gaillard F, Bachelet D, Couchoud C, Laouenan C, Peoc'h K, Simon Q, Charles N, Jourde-Chiche N, Daugas E
Lupus activity and outcomes in lupus patients undergoing maintenance dialysis.
Rheumatology (Oxford, England) 2024, 63, 780-786.

Tridon C, Bachelet D, El Baied M, Eloy P, Ortuno S, Para M, Wicky PH, Vellieux G, de Montmollin E, Bouadma L, Manceau H, Timsit JF, Peoc'h K, Sonneville R
Association of Sepsis With Neurologic Outcomes of Adult Patients Treated With Venoarterial Extracorporeal Membrane Oxygnenation.
Critical Care Explorations 2024, 6, e1042.

Feferman Y, Rosen RY, Gebran S, Yuval JB, Kerioui M, Gönen M, Wei IH, Widmar M, Nash GM, Weiser MR, Paty PB, Hajj C, Roth O'Brien DA, Romesser PB, Crane CH, Smith JJ, Garcia Aguilar J, Pappou EP
Anal Adenocarcinoma Treated in the Era of Total Neoadjuvant Therapy and Nonoperative Management.
Diseases of the Colon and Rectum 2024, 67, 496-504.

Yeoh S, Estrada-Rivadeneyra D, Jackson H, Keren I, Galassini R, Cooray S, Shah P, Agyeman P, Basmaci R, Carrol E, Emonts M, Fink C, Kuijpers T, Martinon-Torres F, Mommert-Tripon M, Paulus S, Pokorn M, Rojo P, Romani L, Schlapbach L, Schweintzger N, Shen CF, Tsolia M, Usuf E, van der Flier M, Vermont C, von Both U, Yeung S, Zavadska D, Coin L, Cunnington A, Herberg J, Levin M, Kaforou M, Hamilton S, PERFORM, DIAMONDS and UK KD Genetic Consortia
Plasma Protein Biomarkers Distinguish Multisystem Inflammatory Syndrome in Children From Other Pediatric Infectious and Inflammatory Diseases.
The Pediatric Infectious Disease Journal 2024

Zborowsky S, Seurat J, Balacheff Q, Minh CNN, Titécat M, Evrard E, Rodriguez-Gonzalez RA, Marchi J, Weitz JS, Debarbieux L
Macrophage-induced reduction of bacteriophage density limits the efficacy of in vivo pulmonary phage therapy.
bioRxiv: The Preprint Server for Biology 2024, 2024.01.16.575879.

Reeves S, Bertrand J, Obee SJ, Hunter S, Howard R, Flanagan RJ
A population pharmacokinetic model to guide clozapine dose selection, based on age, sex, ethnicity, body weight and smoking status.
British Journal of Clinical Pharmacology 2024, 90, 135-145.

Peyre M, Mageau A, Henry Feugeas MC, Doan S, Halimi C, Klein I, Goulenok T, François C, Chauveheid MP, Papo T, Sacré K, French Susac Study Group
Risk factors for severe hearing loss in Susac syndrome: A national cohort study.
European Journal of Neurology 2024, e16211.

Messika J, Eloy P, Boulate D, Charvet A, Fessler J, Jougon J, Lacoste P, Mercier O, Portran P, Roze H, Sage E, Thes J, Tronc F, Vourc'h M, Montravers P, Castier Y, Mal H, Mordant P, Investigators from the ECMOToP Study group
Protocol for venoarterial ExtraCorporeal Membrane Oxygenation to reduce morbidity and mortality following bilateral lung TransPlantation: the ECMOToP randomised controlled trial.
BMJ open 2024, 14, e077770.

Labouret M, Trebossen V, Ntorkou A, Bartoli S, Aubart M, Auvin S, Bader-Meunier B, Baudouin V, Corseri O, Dingulu G, Ducrocq C, Dumaine C, Elmaleh M, Fabien N, Faye A, Hau I, Hentgen V, Kwon T, Meinzer U, Ouldali N, Parmentier C, Pouletty M, Renaldo F, Savioz I, Benoist JF, Le Roux E, Ellul P, Melki I
Juvenile neuropsychiatric systemic lupus erythematosus: A specific clinical phenotype and proposal of a probability score.
Lupus 2024, 33, 328-339.

Boulet S, Ursino M, Michelet R, Aulin LB, Kloft C, Comets E, Zohar S
Bayesian framework for multi-source data integration-Application to human extrapolation from preclinical studies.
Statistical Methods in Medical Research 2024, 9622802241231493.

Haviari S, Mentré F
Distributive randomization: a pragmatic fractional factorial design to screen or evaluate multiple simultaneous interventions in a clinical trial.
BMC medical research methodology 2024, 24, 64.

Tron A, Schlegel V, Pinot J, Bruel S, Ecollan M, Bel JL, Rossignol L, Gauchet A, Gagneux-Brunon A, Mueller J, Banaszuk AS, Thilly N, Gilberg S, Partouche H
Barriers and facilitators to the HPV vaccine: a multicenter qualitative study of French general practitioners.
Archives of Public Health = Archives Belges De Sante Publique 2024, 82, 2.

d'Humières C, Delavy M, Alla L, Ichou F, Gauliard E, Ghozlane A, Levenez F, Galleron N, Quinquis B, Pons N, Mullaert J, Bridier-Nahmias A, Condamine B, Touchon M, Rainteau D, Lamazière A, Lesnik P, Ponnaiah M, Lhomme M, Sertour N, Devente S, Docquier JD, Bougnoux ME, Tenaillon O, Magnan M, Ruppé E, Grall N, Duval X, Ehrlich D, Mentré F, Denamur E, Rocha EPC, Le Chatelier E, Burdet C, PrediRes study group
Perturbation and resilience of the gut microbiome up to 3 months after β-lactams exposure in healthy volunteers suggest an important role of microbial β-lactamases.
Microbiome 2024, 12, 50.

Hcini N, Lambert V, Picone O, Carod JF, Carles G, Pomar L, Epelboin L, Nacher M
Arboviruses and pregnancy: are the threats visible or hidden?.
Tropical Diseases, Travel Medicine and Vaccines 2024, 10, 4.

Hofmeister J, Garin N, Montet X, Scheffler M, Platon A, Poletti PA, Stirnemann J, Debray MP, Claessens YE, Duval X, Prendki V
Validating the accuracy of deep learning for the diagnosis of pneumonia on chest x-ray against a robust multimodal reference diagnosis: a post hoc analysis of two prospective studies.
European Radiology Experimental 2024, 8, 20.

Louchet M, Collier M, Beeker N, Mandelbrot L, Sibiude J, Chouchana L, Treluyer JM
Trends in harmful drug exposure during pregnancy in France between 2013 and 2019: A nationwide cohort study.
PloS One 2024, 19, e0295897.

Picone O
[Prevention of fetal risks. Infections, drugs, toxic substances, irradiation].
La Revue Du Praticien 2024, 74, 217-225.

 2023                                                                            

Blanchet FX, Rahi M, Merlant M, Gare M, Brunet-Possenti F, Descamps V, Bouscarat F
Genital Pseudotumor as a Manifestation of Mpox Virus Infection.
JAMA dermatology 2023, 159, 563-564.

Labbé V, Contou D, Heming N, Megarbane B, Razazi K, Boissier F, Ait-Oufella H, Turpin M, Carreira S, Robert A, Monchi M, Souweine B, Preau S, Doyen D, Vivier E, Zucman N, Dres M, Fejjal M, Noel-Savina E, Bachir M, Jaffal K, Timsit JF, Picos SA, Mariotte E, Martis N, Juguet W, Melica G, Rondeau P, Audureau E, Mekontso Dessap A, ANTICOVID Investigators
Effects of Standard-Dose Prophylactic, High-Dose Prophylactic, and Therapeutic Anticoagulation in Patients With Hypoxemic COVID-19 Pneumonia: The ANTICOVID Randomized Clinical Trial.
JAMA internal medicine 2023, 183, 520-531.

Camirand-Lemyre F, Merson L, Tirupakuzhi Vijayaraghavan BK, Burrell AJC, Citarella BW, Domingue MP, Lévesque S, Usuf E, Wils EJ, Ohshimo S, Martin-Loeches I, Sandulescu O, Laake JH, Lamontagne F, ISARIC Clinical Characterisation Group
Implementation of Recommendations on the Use of Corticosteroids in Severe COVID-19.
JAMA network open 2023, 6, e2346502.

Sorin B, Gaigne L, Garzaro M, Moulis G, Mageau A, Lopez C, Roy-Peaud F, Jeandel PY, Crickx E, Dossier A, Gobert D, Hadjadj J, Puyade M, Languille L, Rasmussen C, Terrier B, Ebbo M, Bonnotte B, Audia S, Galicier L, Michel M, Mahevas M, Viallard JF, Godeau B, CERECAI (Centre de Référence des Cytopénies Auto-Immunes de L'adulte)
Severe SARS-CoV-2 infection in rituximab-treated patients with autoimmune cytopenia: A multicenter observational study.
American Journal of Hematology 2023, 98, E259-E262.

El Messaoudi S, Lemenuel-Diot A, Gonçalves A, Guedj J
A Semi-mechanistic Model to Characterize the Long-Term Dynamics of Hepatitis B Virus Markers During Treatment With Lamivudine and Pegylated Interferon.
Clinical Pharmacology and Therapeutics 2023, 113, 390-400.

Wang F, Mandelbrot L, Affo L, Galacteros F, Bounan S, Fernandez H, Fichez A, Cannas G, Driessen M, Debarge V, Loko G, Gnofam M, Makowski C, Graesslin O, Haddad B, Sibiude J, Drepagest Study Group
Impact of prenatal corticosteroid therapy on sickle cell disease in pregnant women.
International Journal of Gynaecology and Obstetrics: The Official Organ of the International Federation of Gynaecology and Obstetrics 2023, 163, 243-255.

Cortier M, Raphael E, Mailhe M, Thy M, Bertin C, Vallois D, Lescure X, Ghosn J
An unusual case of human monkeypox with successive asynchronous rashes.
Journal of Medical Virology 2023, 95, e28180.

Ferré VM, Bitty-Anderson AM, Peytavin G, Lê MP, Dagnra CA, Coppée R, Gbeasor-Komlanvi FA, Descamps D, Charpentier C, Ekouevi DK
Pharmaco-virological algorithm to target risk of drug resistance among a population of HIV-infected key populations in Togo.
Journal of Medical Virology 2023, 95, e28535.

Gault N, Bachelet D, Laouénan C, Borie R, Cracowski C, Poissy J, Faure K, Lainé F, Lefèvre B, Isnard M, Patrier J, Launay O, Costagliola D, Ghosn J, Bouadma L, French COVID Cohort Study Group and The French COVID Investigators Study Group
Impact of corticosteroids use on midterm sequelae in survivors of COVID-19 admitted to hospital: A prospective cohort study.
Journal of Medical Virology 2023, 95, e28819.

Piorkowski G, Ghosn J, Coppée R, Mailhé M, Ferré VM, Houhou-Fidouh N, Yazdanpanah Y, Le Hingrat Q, Raoul H, Charpentier C, Descamps D, de Lamballerie X
Genomic diversity of mpox virus in Paris area (France) during the 2022 outbreak.
Journal of Medical Virology 2023, 95, e28853.

Prétet JL, Baraquin A, Barret AS, Bercot B, Rahib D, Lydié N, Pépin-Puget L, Lepiller Q
Anal and oropharyngeal HPV distribution in HIV-negative multipartner MSM using self-sampling kits for HIV and sexually transmitted infection screening.
Journal of Medical Virology 2023, 95, e29068.

Chenane HR, Lingas G, Menidjel R, Laouenan C, Tubiana S, Descamps D, Le Hingrat Q, Abel L, Guedj J, Malhotra S, Kumar-Singh S, Visseaux B, Ghosn J, Charpentier C, Lebourgeois S, French COVID Cohort Study Group
High sera levels of SARS-CoV-2 N antigen are associated with death in hospitalized COVID-19 patients.
Journal of Medical Virology 2023, 95, e29247.

Bensaid S, Contejean A, Morand P, Enser M, Eyrolle L, Charlier C, Kernéis S, Anract P, Biau D, Canouï E, Other Members of the CRIOACochin Group
Surgical site infection after pelvic bone and soft tissue sarcoma resection: Risk factors, microbiology, and impact of extended postoperative antibiotic prophylaxis.
Journal of Surgical Oncology 2023, 128, 344-349.

Nguyen T, Heide S, Guilbaud L, Valence S, Perre SV, Blondiaux E, Keren B, Quenum-Miraillet G, Jouannic JM, Mandelbrot L, Picone O, Guet A, Tsatsaris V, Milh M, Girard N, Vincent M, Nizon M, Poirsier C, Vivanti A, Benachi A, Portes Vd, Guibaud L, Patat O, Spentchian M, Frugère L, Héron D, Garel C
Abnormalities of the corpus callosum. Can prenatal imaging predict the genetic status? Correlations between imaging phenotype and genotype.
Prenatal Diagnosis 2023, 43, 746-755.

Diezi L, Dao K, Jullien V, Roussel-Maupetit C, Burton I, André P, Bardinet C, Rothuizen LE, Chtioui H, Manso-Silvan MA, Guittet C, Brunner-Ferber F, Vandenhende F, Chiron C, Granier LA, Buclin T
An innovative ethosuximide granule formulation designed for pediatric use: Comparative pharmacokinetics, safety, tolerability, and palatability profile versus reference syrup.
Pharmacology Research & Perspectives 2023, 11, e01032.

Mercier N, Belhadi D, DeChanet A, Delmas C, Saillard J, Dumousseaux M, Le Mestre S, Fougerou-Leurent C, Ferrane A, Burdet C, Espérou H, Ader F, Hites M, Peiffer-Smadja N, Poissy J, Andrejak C, Paiva JA, Tacconelli E, Staub T, Greil R, Costagliola D, Mentre F, Yazdanpanah Y, Diallo A, DisCoVeRy Safety Working group
Management of pharmacovigilance during the COVID-19 pandemic crisis by the safety department of an academic sponsor: Lessons learnt and challenges from the EU DisCoVeRy clinical trial.
Pharmacology Research & Perspectives 2023, 11, e01072.

Tardivon C, Loingeville F, Donnelly M, Feng K, Sun W, Sun G, Grosser S, Zhao L, Fang L, Mentré F, Bertrand J
Evaluation of model-based bioequivalence approach for single sample pharmacokinetic studies.
CPT: pharmacometrics & systems pharmacology 2023, 12, 904-915.

Fayette L, Sailer MO, Perez-Pitarch A
Pharmacometrics enhanced Bayesian borrowing approach to improve clinical trial efficiency: Case of empagliflozin in type 2 diabetes.
CPT: pharmacometrics & systems pharmacology 2023, 12, 1386-1397.

Néant N, Lingas G, Gaymard A, Belhadi D, Hites M, Staub T, Greil R, Paiva JA, Poissy J, Peiffer-Smadja N, Costagliola D, Yazdanpanah Y, Bouscambert-Duchamp M, Gagneux-Brunon A, Ader F, Mentré F, Wallet F, Burdet C, Guedj J, DisCoVeRy study group
Association between SARS-CoV-2 viral kinetics and clinical score evolution in hospitalized patients.
CPT: pharmacometrics & systems pharmacology 2023, 12, 2027-2037.

Egloff C, Sibiude J, Vauloup-Fellous C, Benachi A, Bouthry E, Biquard F, Hawkins-Villarreal A, Houhou-Fidouh N, Mandelbrot L, Vivanti AJ, Picone O
New data on efficacy of valacyclovir in secondary prevention of maternal-fetal transmission of cytomegalovirus.
Ultrasound in Obstetrics & Gynecology: The Official Journal of the International Society of Ultrasound in Obstetrics and Gynecology 2023, 61, 59-66.

Hawkins-Villarreal A, Moreno-Espinosa AL, Castillo K, Hahner N, Picone O, Mandelbrot L, Simon I, Gratacós E, Goncé A, Eixarch E
Brain cortical maturation assessed by magnetic resonance imaging in unaffected or mildly affected fetuses with cytomegalovirus infection.
Ultrasound in Obstetrics & Gynecology: The Official Journal of the International Society of Ultrasound in Obstetrics and Gynecology 2023, 61, 566-576.

Périllaud-Dubois C, Hachicha-Maalej N, Lepers C, Letamendia E, Teissier N, Cousien A, Sibiude J, Deuffic-Burban S, Vauloup-Fellous C, Picone O
Cost-effectiveness of screening and valacyclovir-based treatment strategies for first-trimester cytomegalovirus primary infection in pregnant women in France.
Ultrasound in Obstetrics & Gynecology: The Official Journal of the International Society of Ultrasound in Obstetrics and Gynecology 2023, 62, 573-584.

Claudel N, Barrois M, Vivanti AJ, Rosenblatt J, Salomon LJ, Jouannic JM, Picone O, Carbillon L, Vialard F, Launay E, Tsatsaris V, Curis E, El Khattabi L, APHP prenatal diagnosis group
Non-invasive cell-free DNA prenatal screening for trisomy 21 as part of primary screening strategy in twin pregnancies.
Ultrasound in Obstetrics & Gynecology: The Official Journal of the International Society of Ultrasound in Obstetrics and Gynecology 2023

Jacquier M, Chalouhi G, Marquant F, Bussieres L, Grevent D, Picone O, Mandelbrot L, Mahallati H, Briand N, Elie C, Siauve N, Salomon LJ
Placental T2* and BOLD effect in response to hyperoxia in normal and fetal growth restricted pregnancies : multicenter cohort.
Ultrasound in Obstetrics & Gynecology: The Official Journal of the International Society of Ultrasound in Obstetrics and Gynecology 2023

Villaamil A, Han L, Eloy P, Bachelet D, Gennequin M, Jeantrelle C, Moyer JD, Weiss E, Foucrier A
Risk factors of second ventilator-associated pneumonia in trauma patients: a retrospective cohort study.
European Journal of Trauma and Emergency Surgery: Official Publication of the European Trauma Society 2023, 49, 1981-1988.

Tabah A, Buetti N, Staiquly Q, Ruckly S, Akova M, Aslan AT, Leone M, Conway Morris A, Bassetti M, Arvaniti K, Lipman J, Ferrer R, Qiu H, Paiva JA, Povoa P, De Bus L, De Waele J, Zand F, Gurjar M, Alsisi A, Abidi K, Bracht H, Hayashi Y, Jeon K, Elhadi M, Barbier F, Timsit JF, EUROBACT-2 Study Group, ESICM, ESCMID ESGCIP and the OUTCOMEREA Network
Epidemiology and outcomes of hospital-acquired bloodstream infections in intensive care unit patients: the EUROBACT-2 international cohort study.
Intensive Care Medicine 2023, 49, 178-190.

Gaillet A, Bay P, Péju E, Ait-Oufella H, Azoulay E, Benchabane N, Cerf C, Cohen Y, de Prost N, Faguer S, Geri G, Grangé S, Kahn JE, Kreitmann L, Larcher R, Lefèvre G, Mabrouki A, Mekonsto-Dessap A, Panel K, Pène F, Pineton de Chambrun M, Quenot JP, Tandjaoui-Lambiotte Y, Timsit JF, Vieillard-Baron A, Dargent A, Herault A, Groh M
Epidemiology, clinical presentation, and outcomes of 620 patients with eosinophilia in the intensive care unit.
Intensive Care Medicine 2023, 49, 291-301.

Bagshaw SM, Neto AS, Smith O, Weir M, Qiu H, Du B, Wang AY, Gallagher M, Bellomo R, Wald R
Correction: Impact of renal-replacement therapy strategies on outcomes for patients with chronic kidney disease: a secondary analysis of the STARRT-AKI trial..
Intensive care medicine 2023, 49, 381-383.

Park S, Robba C, Sonneville R
Neuromonitoring for prognostication under ECMO.
Intensive Care Medicine 2023, 49, 451-454.

Sonneville R, de Montmollin E, Contou D, Ferrer R, Gurjar M, Klouche K, Sarton B, Demeret S, Bailly P, da Silva D, Escudier E, Le Guennec L, Chabanne R, Argaud L, Ben Hadj Salem O, Thyrault M, Frerou A, Louis G, De Pascale G, Horn J, Helbok R, Geri G, Bruneel F, Martin-Loeches I, Taccone FS, De Waele JJ, Ruckly S, Staiquly Q, Citerio G, Timsit JF, EURECA Investigator Study Group
Clinical features, etiologies, and outcomes in adult patients with meningoencephalitis requiring intensive care (EURECA): an international prospective multicenter cohort study.
Intensive Care Medicine 2023, 49, 517-529.

Sonneville R, de Montmollin E, Gaudemer A, Ruckly S, Timsit JF
Meningoencephalitis requiring intensive care and neuromonitorization. Author's reply.
Intensive Care Medicine 2023, 49, 884-885.

Newcombe V, Muehlschlegel S, Sonneville R
Neurological diseases in intensive care.
Intensive Care Medicine 2023, 49, 987-990.

Turmine J, Florence AM, Tardivon C, Passot G, Gillion JF, Moszkowicz D, SFCP-CH (Club Hernie working group)
Obesity increases the surgical complexity and risk of recurrence after midline primary ventral hernia repair: results on 2307 patients from the French Society of hernia surgery (SFCP-CH) registry database.
Hernia: The Journal of Hernias and Abdominal Wall Surgery 2023

Oliosi E, Rossi G, Nguyen Y, Honsel V, Bert F, Roux O, Fantin B, Lefort A
Enterococcal pyogenic liver abscesses: high risk of treatment failure and mortality.
European Journal of Clinical Microbiology & Infectious Diseases: Official Publication of the European Society of Clinical Microbiology 2023, 42, 193-199.

Abraham S, Piarroux R, Zhou Y, Tesic V, Abeleda A, Houhou-Fidouh N, Nicaise-Rolland P, Landraud L, McLeod R, Houzé S
Performances of ICT Toxoplasma IgG-IgM test in comparison with Vidas® toxo competition to determine the immune status against Toxoplasma gondii.
European Journal of Clinical Microbiology & Infectious Diseases: Official Publication of the European Society of Clinical Microbiology 2023, 42, 1327-1335.

Van RN, Tubiana S, De Broucker T, Cédric J, Roy C, Meyohas MC, Prazuck T, Chirouze C, Hoen B, Duval X, Revest M, COMBAT study group
Persistent headaches one year after bacterial meningitis: prevalence, determinants and impact on quality of life.
European Journal of Clinical Microbiology & Infectious Diseases: Official Publication of the European Society of Clinical Microbiology 2023, 42, 1459-1467.

Ravalihasy A, Ante-Testard PA, Kardas-Sloma L, Yazdanpanah Y, De Allegri M, Ridde V
Quantitative Methods Used to Evaluate Impact of Combination HIV Prevention Intervention: A Methodological Systematic Review.
AIDS and behavior 2023, 1-11.

Labouret M, Costi S, Bondet V, Trebossen V, Le Roux E, Ntorkou A, Bartoli S, Auvin S, Bader-Meunier B, Baudouin V, Corseri O, Dingulu G, Ducrocq C, Dumaine C, Elmaleh M, Fabien N, Faye A, Hau I, Hentgen V, Kwon T, Meinzer U, Ouldali N, Parmentier C, Pouletty M, Renaldo F, Savioz I, Rozenberg F, Frémond ML, Lepelley A, Rice GI, Seabra L, Benoist JF, Duffy D, Crow YJ, Ellul P, Melki I
Juvenile Neuropsychiatric Systemic Lupus Erythematosus: Identification of Novel Central Neuroinflammation Biomarkers.
Journal of Clinical Immunology 2023, 43, 615-624.

Hocini H, Wiedemann A, Blengio F, Lefebvre C, Cervantes-Gonzalez M, Foucat E, Tisserand P, Surenaud M, Coléon S, Prague M, Guillaumat L, Krief C, Fenwick C, Laouénan C, Bouadma L, Ghosn J, Pantaleo G, Thiébaut R, French COVID cohort study group, Lévy Y
Neutrophil Activation and Immune Thrombosis Profiles Persist in Convalescent COVID-19.
Journal of Clinical Immunology 2023, 43, 882-893.

Grambow-Velilla J, Mahida B, Benali K, Deconinck L, Chong-Nguyen C, Cimadevilla C, Duval X, Iung B, Rouzet F, Hyafil F
Prognosis and follow-up of patients with prosthetic valve endocarditis treated conservatively in relation to WBC-SPECT imaging.
Journal of Nuclear Cardiology: Official Publication of the American Society of Nuclear Cardiology 2023, 30, 2633-2643.

Renggli L, Gasser M, Buetti N, Kronenberg A, Swiss Centre for Antibiotic Resistance
Increase in methicillin-susceptible Staphylococcus aureus bloodstream infections in Switzerland: a nationwide surveillance study (2008-2021).
Infection 2023

Boukobza M, Ilic-Habensus E, Mourvillier B, Duval X, Laissy JP
Brain abscesses in infective endocarditis: contemporary profile and neuroradiological findings.
Infection 2023, 51, 1431-1444.

Baklouti S, Comets E, Gandia P, Concordet D
Multivariate Exact Discrepancy: A New Tool for PK/PD Model Evaluation.
Clinical Pharmacokinetics 2023, 62, 1599-1609.

Beaumont AL, Rozencwajg S, Peiffer-Smadja N, Montravers P
COVID-19: Brief overview of therapeutic strategies.
Anaesthesia, Critical Care & Pain Medicine 2023, 42, 101181.

Moy AC, Kimmoun A, Merkling T, Berçot B, Caméléna F, Poncin T, Deniau B, Mebazaa A, Dudoignon E, Dépret F, PCR Multiplex Study group (PMS group)
Performance evaluation of a PCR panel (FilmArray® Pneumonia Plus) for detection of respiratory bacterial pathogens in respiratory specimens: A systematic review and meta-analysis.
Anaesthesia, Critical Care & Pain Medicine 2023, 42, 101300.

Celestin B, Habensus EI, Tubiana S, Préau M, Millot S, Lescure FX, Kerneis C, Para M, Duval X, Iung B, POST-IMAGE study group
Determinants of adherence to oral hygiene prophylaxis guidelines in patients with previous infective endocarditis.
Archives of Cardiovascular Diseases 2023, 116, 176-182.

Desroche LM, Mandry D, Ducrocq G, Durand-Zaleski I, Alfaiate T, Millischer D, Milleron O, Huttin O, Valla M, Belle L, Lavie-Badie Y, Farah B, Diakov C, Logeart D, Safar B, Burdet C, Jondeau G, CAMAREC investigators
Multicentre medicoeconomic evaluation of cardiac magnetic resonance imaging for predicting coronary artery disease in left ventricular dysfunction: The CAMAREC study design.
Archives of Cardiovascular Diseases 2023, S1875-2136(23)00142-0.

Amarsy R, Fournier S, Trystram D, Monteil C, Raynaud X, Jarlier V, Robert J
Decrease of hospital- and community-acquired bloodstream infections due to Streptococcus pneumoniae and Streptococcus pyogenes during the first year of the COVID-19 pandemic: A time-series analysis in Paris region..
American journal of infection control 2023, 51, 475-477.

Dupuis N, Pizzoferrato AC, Garabedian C, Rozenberg P, Kayem G, Harvey T, Mandelbrot L, Doret M, Fuchs F, Azria E, Sénat MV, Ceccaldi PF, Seco A, Chantry A, Le Ray C, GROG (Groupe de Recherche en Obstétrique et Gynécologie)
Moderate or intensive management of the active phase of second-stage labor and risk of urinary and anal incontinence: results of the PASST randomized controlled trial.
American Journal of Obstetrics and Gynecology 2023, S0002-9378(23)00506-9.

Adewale V, Varotsis D, Iyer N, Mascio DD, Dupont A, Abramowitz L, Steer PJ, Gimovsky M, Berghella V
Planned Cesarean Delivery versus Planned Vaginal Delivery: A Systematic Review and Meta-Analysis of Randomized Controlled Trials.
American journal of obstetrics & gynecology MFM 2023, 101186.

Geslain G, Ponsin P, Lãzãrescu AM, Tridon C, Robin N, Riaud C, Orliaguet G
Incidence of iatrogenic withdrawal syndrome and associated factors in surgical pediatric intensive care.
Archives De Pediatrie: Organe Officiel De La Societe Francaise De Pediatrie 2023, 30, 14-19.

See P, Bonacorsi S, Toumazi A, Doit C, Naudin J, Chomton M, Le Bourgeois F, Caseris M, Mariani-Kurkdjian P, Poncelet G, Geslain G, Dauger S, Levy M
Factors linked to Staphylococcus aureus healthcare-associated infections among pediatric intensive care unit colonized patients.
Archives De Pediatrie: Organe Officiel De La Societe Francaise De Pediatrie 2023, 30, 153-157.

Ghazali DA, Rousseau R, Breque C, Oriot D
Effect of real-time feedback device compared to use or non-use of a checklist performance aid on post-training performance and retention of infant cardiopulmonary resuscitation: A randomized simulation-based trial.
Australasian Emergency Care 2023, 26, 36-44.

Bortolotti A, Troiano C, Bobone S, Konai MM, Ghosh C, Bocchinfuso G, Acharya Y, Santucci V, Bonacorsi S, Di Stefano C, Haldar J, Stella L
Mechanism of lipid bilayer perturbation by bactericidal membrane-active small molecules.
Biochimica Et Biophysica Acta. Biomembranes 2023, 1865, 184079.

Lefebvre T, Boutten A, Raulet-Bussian C, Raynor A, Manceau H, Puy H, Moulouel B, Schmitt C, Timsit JF, Lefort A, Weiss E, Lescure FX, Ricard JD, Sonneville R, Peoc'h K
Evaluation of iron metabolism in hospitalized COVID-19 patients.
Clinica Chimica Acta; International Journal of Clinical Chemistry 2023, 548, 117509.

Fougerou-Leurent C, Delmas C, Saillard J, Dumousseaux M, Ferrane A, Mercier N, Terzic V, Le Mestre S, Dechanet A, Belhadi D, Metois A, Burdet C, Mentré F, Noret M, Diallo A, Petrov-Sanchez V, Couffin-Cadiergues S, Hites M, Ader F, Esperou H
Ensuring quality control in a COVID-19 clinical trial during the pandemic: The experience of the Inserm C20-15 DisCoVeRy study.
Contemporary Clinical Trials 2023, 131, 107267.

Walter T, Hajage D, Ricard JD
Extended Prone Positioning Duration, But After How Many Sessions?.
Chest 2023, 163, e286-e287.

Mailhe M, Beaumont AL, Thy M, Le Pluart D, Perrineau S, Houhou-Fidouh N, Deconinck L, Bertin C, Ferré VM, Cortier M, De La Porte Des Vaux C, Phung BC, Mollo B, Cresta M, Bouscarat F, Choquet C, Descamps D, Ghosn J, Lescure FX, Yazdanpanah Y, Joly V, Peiffer-Smadja N
Clinical characteristics of ambulatory and hospitalized patients with monkeypox virus infection: an observational cohort study.
Clinical Microbiology and Infection: The Official Publication of the European Society of Clinical Microbiology and Infectious Diseases 2023, 29, 233-239.

Ghosn J, Bachelet D, Livrozet M, Cervantes-Gonzalez M, Poissy J, Goehringer F, Gandonniere CS, Maillet M, Bani-Sadr F, Martin-Blondel G, Tattevin P, Launay O, Surgers L, Dudoignon E, Liegeon G, Zucman D, Joseph C, Senneville E, Yelnik C, Roger PM, Faure K, Gousseff M, Cabié A, Duval X, Chirouze C, Laouénan C, French COVID cohort Study Group and the French COVID cohort Investigators Group
Prevalence of post-acute coronavirus disease 2019 symptoms twelve months after hospitalization in participants retained in follow-up: analyses stratified by gender from a large prospective cohort.
Clinical Microbiology and Infection: The Official Publication of the European Society of Clinical Microbiology and Infectious Diseases 2023, 29, 254.e7-254.e13.

Alidjinou EK, Demaret J, Corroyer-Simovic B, Vuotto F, Miczek S, Labreuche J, Goffard A, Trauet J, Lupau D, Dendooven A, Huvent-Grelle D, Podvin J, Dreuil D, Faure K, Deplanque D, Bocket L, Duhamel A, Sobaszek A, Hober D, Hisbergues M, Puisieux F, Autran B, Yazdanpanah Y, Labalette M, Lefèvre G
Serum neutralization of SARS coronavirus 2 Omicron sublineages BA.1 and BA.2 and cellular immune responses 3 months after booster vaccination.
Clinical Microbiology and Infection: The Official Publication of the European Society of Clinical Microbiology and Infectious Diseases 2023, 29, 258.e1-258.e4.

Dumont M, Guilhou T, Gerin M, Frémont-Goudot G, Nivose PL, Koubbi A, Joly V, Bouadma L, Yazdanpanah Y, André MH, de La Porte des Vaux C
Myocarditis in monkeypox-infected patients: a case series.
Clinical Microbiology and Infection: The Official Publication of the European Society of Clinical Microbiology and Infectious Diseases 2023, 29, 390.e5-390.e7.

Martin-Blondel G, Marcelin AG, Soulié C, Kaisaridi S, Lusivika-Nzinga C, Zafilaza K, Dorival C, Nailler L, Boston A, Ronchetti AM, Melenotte C, Cabié A, Choquet C, Trinh-Duc A, Lacombe K, Gaube G, Coustillères F, Pourcher V, Martellosio JP, Peiffer-Smadja N, Chauveau M, Housset P, Piroth L, Devaux M, Pialoux G, Martin A, Dubee V, Frey J, Le Bot A, Cazanave C, Petua P, Liblau R, Carrat F, Yordanov Y
Time to negative PCR conversion amongst high-risk patients with mild-to-moderate Omicron BA.1 and BA.2 COVID-19 treated with sotrovimab or nirmatrelvir.
Clinical Microbiology and Infection: The Official Publication of the European Society of Clinical Microbiology and Infectious Diseases 2023, 29, 543.e5-543.e9.

Bouzid D, Hingrat QL, Salipante F, Ferré VM, Chevallier T, Tubiana S, Lucet JC, Choquet C, Yazdanpanah Y, Timsit JF, Descamps D, Houhou N, Visseaux B, Loubet P
Agreement of respiratory viruses' detection between nasopharyngeal swab and bronchoalveolar lavage in adults admitted for pneumonia: a retrospective study.
Clinical Microbiology and Infection: The Official Publication of the European Society of Clinical Microbiology and Infectious Diseases 2023, 29, 942.e1-942.e6.

Bouzid D, Kapfer T, Marot S, Ing V, Ferré VM, Chauvin A, Le Goff J, Ellouze S, Salmona M, Hermand C, Bourg A, Schnuriger A, Fémy F, Van Tinh MN, Brichler S, Veyer D, Le Borgne P, Fafi-Kremer S, L'Honneur AS, Augustin C, Simon T, Cachanado M, IMProving Emergency Care (IMPEC) FHU authors group, Freund Y
Outcomes of Omicron sub-lineages BA.1.1 and BA.2 infection compared with the sub-lineage BA.1 infection in emergency departments' patients.
Clinical Microbiology and Infection: The Official Publication of the European Society of Clinical Microbiology and Infectious Diseases 2023, 29, 551-553.

Buetti N, Marschall J, Catho G, Timsit JF, Mermel L
Which trial do we need? Infectious and non-infectious complications of peripherally inserted central venous catheters and midline catheters.
Clinical Microbiology and Infection: The Official Publication of the European Society of Clinical Microbiology and Infectious Diseases 2023, 29, 568-569.

Fröberg G, Maurer FP, Chryssanthou E, Fernström L, Benmansour H, Boarbi S, Mengshoel AT, Keller PM, Viveiros M, Machado D, Fitzgibbon MM, Mok S, Werngren J, Cirillo DM, Alcaide F, Hyyryläinen HL, Aubry A, Andres S, Nadarajan D, Svensson E, Turnidge J, Giske CG, Kahlmeter G, Cambau E, van Ingen J, Schön T
Towards clinical breakpoints for non-tuberculous mycobacteria - Determination of epidemiological cut off values for the Mycobacterium avium complex and Mycobacterium abscessus using broth microdilution..
Clinical microbiology and infection : the official publication of the European Society of Clinical Microbiology and Infectious Diseases 2023, 29, 758-764.

Celante H, Oubaya N, Fourati S, Beaune S, Khellaf M, Casalino E, Ricard JD, Vieillard-Baron A, Heming N, Mekontso Dessap A, de Montmollin E, Benghanem S, Epaillard N, Layese R, de Prost N, Prono-RSV study group of the clinical data warehouse of Greater Paris University Hospitals
Prognosis of hospitalised adult patients with respiratory syncytial virus infection: a multicentre retrospective cohort study.
Clinical Microbiology and Infection: The Official Publication of the European Society of Clinical Microbiology and Infectious Diseases 2023, 29, 943.e1-943.e8.

Buetti N, Ruckly S, Souweine B, Mimoz O, Timsit JF
Risk of infections in intravascular catheters in situ for more than 10 days: a post hoc analysis of randomized controlled trials.
Clinical Microbiology and Infection: The Official Publication of the European Society of Clinical Microbiology and Infectious Diseases 2023, 29, 1200.e1-1200.e5.

Tagliani E, Kohl TA, Ghodousi A, Groenheit R, Holicka Y, Niemann S, Maurer FP, Cirillo DM, Cambau E
Appeal from the European reference laboratory network for tuberculosis for improving the diagnosis of infections caused by non-tuberculous mycobacteria..
Clinical microbiology and infection : the official publication of the European Society of Clinical Microbiology and Infectious Diseases 2023, S1198-743X(23)00280-X.

Thy M, Cosson G, Danjou W, Kramer L, Pourcher V, Lescure FX
Comparison between targeted and vaccinated populations during the mpox vaccination campaign in France.
Clinical Microbiology and Infection: The Official Publication of the European Society of Clinical Microbiology and Infectious Diseases 2023, 29, 1351-1353.

Bouzid D, Visseaux B, Ferré VM, Peiffer-Smadja N, Le Hingrat Q, Loubet P
Respiratory syncytial virus in adults with comorbidities: an update on epidemiology, vaccines, and treatments.
Clinical Microbiology and Infection: The Official Publication of the European Society of Clinical Microbiology and Infectious Diseases 2023, S1198-743X(23)00412-3.

Tunesi S, Zelazny A, Awad Z, Mougari F, Buyck JM, Cambau E
Antimicrobial susceptibility of Mycobacterium abscessus and treatment of pulmonary and extra-pulmonary infections.
Clinical Microbiology and Infection: The Official Publication of the European Society of Clinical Microbiology and Infectious Diseases 2023, S1198-743X(23)00482-2.

Gaborieau B, Debarbieux L
The role of the animal host in the management of bacteriophage resistance during phage therapy.
Current Opinion in Virology 2023, 58, 101290.

Farfour E, Clichet V, Péan de Ponfilly G, Carbonnelle E, Vasse M
Impact of COVID-19 pandemic on blood culture practices and bacteremia epidemiology..
Diagnostic microbiology and infectious disease 2023, 107, 116002.

Pons S, Frapy E, Sereme Y, Gaultier C, Lebreton F, Kropec A, Danilchanka O, Schlemmer L, Schrimpf C, Allain M, Angoulvant F, Lecuyer H, Bonacorsi S, Aschard H, Sokol H, Cywes-Bentley C, Mekalanos JJ, Guillard T, Pier GB, Roux D, Skurnik D
A high-throughput sequencing approach identifies immunotherapeutic targets for bacterial meningitis in neonates.
EBioMedicine 2023, 88, 104439.

McLean C, Barry H, Kieh M, Anywaine Z, Tapima Rogers B, Doumbia S, Sirima SB, Serry-Bangura A, Habib Beavogui A, Gaddah A, Katwere M, Hendriks J, Keshinro B, Eholie S, Kibuuka H, Kennedy SB, Anzala O, Samai M, D'Ortenzio E, Leigh B, Sow S, Thiébaut R, Greenwood B, Watson-Jones D, Douoguih M, Luhn K, Robinson C
Immune response of a two-dose heterologous Ebola vaccine regimen: summary of three African clinical trials using a single validated Filovirus Animal Nonclinical Group enzyme-linked immunosorbent assay in a single accredited laboratory.
EBioMedicine 2023, 91, 104562.

Jouet A, Braet SM, Gaudin C, Bisch G, Vasconcellos S, Epaminondas Nicacio de Oliveira do Livramento RE, Prado Palacios YY, Fontes AB, Lucena N, Rosa P, Moraes M, La K, Badalato N, Lenoir E, Ferré A, Clément M, Hasker E, Grillone SH, Abdou W, Said A, Assoumani Y, Attoumani N, Laurent Y, Cambau E, de Jong BC, Suffys PN, Supply P
Hi-plex deep amplicon sequencing for identification, high-resolution genotyping and multidrug resistance prediction of Mycobacterium leprae directly from patient biopsies by using Deeplex Myc-Lep..
EBioMedicine 2023, 93, 104649.

Sax PE, Arribas JR, Orkin C, Lazzarin A, Pozniak A, DeJesus E, Maggiolo F, Stellbrink HJ, Yazdanpanah Y, Acosta R, Huang H, Hindman JT, Martin H, Baeten JM, Wohl D, GS-US-380-1489 and GS-US-380-1490 study investigators
Bictegravir/emtricitabine/tenofovir alafenamide as initial treatment for HIV-1: five-year follow-up from two randomized trials.
EClinicalMedicine 2023, 59, 101991.

Valtuille Z, Lefevre-Utile A, Ouldali N, Beyler C, Boizeau P, Dumaine C, Felix A, Assad Z, Faye A, Melki I, Kaguelidou F, Meinzer U
Calculating the fraction of Kawasaki disease potentially attributable to seasonal pathogens: a time series analysis.
EClinicalMedicine 2023, 61, 102078.

Gentilotti E, Górska A, Tami A, Gusinow R, Mirandola M, Rodríguez Baño J, Palacios Baena ZR, Rossi E, Hasenauer J, Lopes-Rafegas I, Righi E, Caroccia N, Cataudella S, Pasquini Z, Osmo T, Del Piccolo L, Savoldi A, Kumar-Singh S, Mazzaferri F, Caponcello MG, de Boer G, Hara GL, ORCHESTRA Study Group, De Nardo P, Malhotra S, Canziani LM, Ghosn J, Florence AM, Lafhej N, van der Gun BTF, Giannella M, Laouénan C, Tacconelli E
Clinical phenotypes and quality of life to define post-COVID-19 syndrome: a cluster analysis of the multinational, prospective ORCHESTRA cohort.
EClinicalMedicine 2023, 62, 102107.

Taheri N, Mageau A, Chauveheid MP, Dossier A, Farhi F, Mendes C, Papo T, Goulenok T, Sacre K
Impact of adherence to EULAR quality indicators on the quality of life of patients with systemic lupus erythematosus.
European Journal of Internal Medicine 2023, 109, 68-72.

Goulenok T, Ferré VM, Mageau A, Papo T, Sacré K
Risk factors for high-risk human papillomavirus cervical infection and clearance in patients with systemic lupus erythematosus.
European Journal of Internal Medicine 2023, 116, 149-151.

Wainstein M, Spyrison N, Dai D, Ghadimi M, Chávez-Iñiguez JS, Rizo-Topete L, Citarella BW, Merson L, Pole JD, Claure-Del Granado R, Johnson DW, Shrapnel S, ISARIC Characterization Group
Association of Country Income Level With the Characteristics and Outcomes of Critically Ill Patients Hospitalized With Acute Kidney Injury and COVID-19.
Kidney International Reports 2023

Geoffroy PA, Schroder CM, Bourgin P, Maruani J, Lejoyeux M, d'Ortho MP, Couffignal C, SoPsy-Depression Group
Validation of a data collection set for the psychiatric, addiction, sleep and chronobiological assessments of patients with depression: A Delphi study for the SoPsy-depression French national cohort.
L'Encephale 2023, 49, 117-123.

Bengtsson-Palme J, Abramova A, Berendonk TU, Coelho LP, Forslund SK, Gschwind R, Heikinheimo A, Jarquín-Díaz VH, Khan AA, Klümper U, Löber U, Nekoro M, Osińska AD, Ugarcina Perovic S, Pitkänen T, Rødland EK, Ruppé E, Wasteson Y, Wester AL, Zahra R
Towards monitoring of antimicrobial resistance in the environment: For what reasons, how to implement it, and what are the data needs?.
Environment International 2023, 178, 108089.

Mathieu M, Lambert V, Carles G, Picone O, Carod JF, Pomar L, Nacher M, Hcini N
Incidence, causes, and risk factors of stillbirth in an Amazonian context: Saint Laurent du Maroni maternity ward 2016-2021.
European Journal of Obstetrics & Gynecology and Reproductive Biology: X 2023, 18, 100190.

Sentilhes L, Schmitz T, Madar H, Bouchghoul H, Fuchs F, Garabédian C, Korb D, Nouette-Gaulain K, Pécheux O, Sananès N, Sibiude J, Sénat MV, Goffinet F
[The cesarean procedure: Guidelines for clinical practice from the French College of Obstetricians and Gynecologists].
Gynecologie, Obstetrique, Fertilite & Senologie 2023, 51, 7-34.

Herbel S, Uhel F, Sibiude J, Charlier C
[Sepsis during pregnancy: Key points in 2022].
Gynecologie, Obstetrique, Fertilite & Senologie 2023, 51, 134-142.

Mandelbrot L, Vauloup-Fellous C, Huissoud C, Ghosn J, Picone O
[Monkeypox: Proposals for care in pregnancy].
Gynecologie, Obstetrique, Fertilite & Senologie 2023, 51, 284-288.

Hazan F, Verdonk C, Coutance G, Ferré VM, Marot S, Melo VDD, Legeai C, Lebreton G, Para M, Varnous S, Dorent R
Severity of SARS-CoV-2 Omicron variant infection in heart transplant recipients.
The Journal of Heart and Lung Transplantation: The Official Publication of the International Society for Heart Transplantation 2023, 42, 558-561.

Blot S, Timsit JF, Zahar JR
Preventing healthcare-acquired infections in cancer patients with febrile neutropenia in intensive care units: The role of granulocyte-colony stimulating factor prophylaxis.
Intensive & Critical Care Nursing 2023, 78, 103466.

Zahar JR, Blot S
Carbapenem-resistant Enterobacterales (CRE): The storm is coming.
Intensive & Critical Care Nursing 2023, 79, 103526.

Hamon A, Liegeon G, Louis K, Cambau E, De Castro N
Atypical presentation of Mycobacterium xenopi pulmonary infection in a kidney transplant recipient: A case report and literature review.
IDCases 2023, 31, e01675.

Parisey M, Houze S, Bailly J, Taudon N, Jaffal K, Argy N, Rouzaud C, Mégarbane B, Lariven S, Yazdanpanah Y, Matheron S
Late dihydroartemisinin-piperaquine treatment failure of P. falciparum malaria attack related to insufficient dosing in an obese patient.
IDCases 2023, 33, e01847.

Méchaï F, Kolakowska A, Carbonnelle E, Bouchaud O, Tresallet C, Jaureguy F
Intra-abdominal abscesses: Microbiological epidemiology and empirical antibiotherapy.
Infectious Diseases Now 2023, 53, 104604.

Lafaurie M, Burdet C, Hammas K, Goldwirt L, Berçot B, Sauvageon H, Houze P, Fourmont M, Mentré F, Molina JM
Population pharmacokinetics and pharmacodynamics of imipenem in neutropenic adult patients.
Infectious Diseases Now 2023, 53, 104625.

Tandjaoui-Lambiotte Y, Lomont A, Moenne-Locoz P, Seytre D, Zahar JR
Spread of viruses, which measures are the most apt to control COVID-19?.
Infectious Diseases Now 2023, 53, 104637.

Cohen R, Levy C, Rybak A, Angoulvant F, Ouldali N, Grimprel E
Immune debt: Recrudescence of disease and confirmation of a contested concept.
Infectious Diseases Now 2023, 53, 104638.

Deniaud F, Vignier N, Raynal G, Boo N, Collignon A, Hennequin C
Schistosoma haematobium urinary tract complications in African migrants attending primary care facilities in Paris, France: A retrospective cohort study (2004-2018).
Infectious Diseases Now 2023, 53, 104715.

Cohen R, Bidet P, Varon E, Béchet S, Cohen JF, Bonacorsi S, Levy C
Unprecedentedly high rates of Group A Streptococcus nasopharyngeal carriage in infants and toddlers in France, 2022-2023.
Infectious Diseases Now 2023, 53, 104720.

Scanvion A, Vignier N, Durand F, Poupon-Ferron S, Billaud E
Heterogeneity of HIV testing practices in free healthcare centers in France: A national demonstration study.
Infectious Diseases Now 2023, 53, 104726.

Levy C, Varon E, Bidet P, Béchet S, Batard C, Wollner A, Thollot F, Bonacorsi S, Cohen R
Otorrhea bacterial profile, epidemiology before widespread use of the third-generation pneumococcal conjugate vaccine in French children, a prospective study from 2015 to 2023.
Infectious Diseases Now 2023, 53, 104738.

Alviset S, Rodari S, Poupet H, Mizrahi A, Gastli N, Philippart F, Charpentier J, Pilmis B, Kernéis S
Potential impact of real-time processing and rapid susceptibility testing of blood samples in Gram-negative bloodstream infections in intensive care patients.
Infectious Diseases Now 2023, 53, 104773.

Cohen R, Grimprel E, Rybak A, Hau I, Madhi F, Ouldali N, Raymond J
The principles of curative antibiotic treatments.
Infectious Diseases Now 2023, 53, 104780.

Cohen R, Tauzin M, Rybak A, Ouldali N, Grimprel E
Definitions and implications of the pharmacokinetic-pharmacodynamic parameters of antibiotics in pediatric clinical practice.
Infectious Diseases Now 2023, 53, 104781.

Madhi F, Rybak A, Basmaci R, Romain AS, Werner A, Biscardi S, Dubos F, Faye A, Grimprel E, Raymond J, Ros B, Cohen R
Antimicrobial treatment of urinary tract infections in children.
Infectious Diseases Now 2023, 104786.

Lorrot M, Gillet Y, Basmaci R, Bréhin C, Dommergues MA, Favier M, Jeziorski E, Panetta L, Pinquier D, Ouziel A, Grimprel E, Cohen R
Antibiotic therapy for osteoarticular infections in 2023: Proposals from the Pediatric Infectious Pathology Group (GPIP).
Infectious Diseases Now 2023, 104789.

Davido B, Crémieux AC, Vaugier I, Gatin L, Noussair L, Massias L, Laurent F, Saleh-Mghir A
Efficacy of ceftazidime-avibactam in various combinations for the treatment of experimental osteomyelitis due to Klebsiella pneumoniae carbapenemase (KPC)-producing Klebsiella pneumoniae.
International Journal of Antimicrobial Agents 2023, 61, 106702.

Maillard A, Delory T, Bernier J, Villa A, Chaibi K, Escaut L, Contejean A, Bercot B, Robert J, El Alaoui F, Tankovic J, Poupet H, Cuzon G, Lafaurie M, Surgers L, Joseph A, Paccoud O, Molina JM, Bleibtreu A, Treatment of AmpC-producing Enterobacterales Study Group
Effectiveness of third-generation cephalosporins or piperacillin compared with cefepime or carbapenems for severe infections caused by wild-type AmpC β-lactamase-producing Enterobacterales: A multi-centre retrospective propensity-weighted study.
International Journal of Antimicrobial Agents 2023, 62, 106809.

Goulenok T, Seurat J, Selle AdL, Jullien V, Leflon-Guibout V, Grall N, Lescure FX, Lepeule R, Bertrand J, Fantin B, Burdet C, Lefort A
Pharmacokinetic interaction between rifampicin and clindamycin in staphylococcal osteoarticular infections.
International Journal of Antimicrobial Agents 2023, 62, 106885.

Baud FJ, Jullien V, Desnos-Ollivier M, Lamhaut L, Lortholary O
Caspofungin sequestration in a polyacrylonitrile-derived filter. Increasing the dose does not mitigate sequestration.
International Journal of Antimicrobial Agents 2023, 107007.

Paccoud O, Chamillard X, Kendjo E, Vinatier I, Surgers L, Magne D, Wyplosz B, Angoulvant A, Bouchaud O, Izri A, Matheron S, Houzé S, Thellier M, Ndour AP, Buffet P, Caumes E, Jauréguiberry S, French National Reference Center for Imported Malaria Study Group
Favorable outcome without corticosteroids during post-artesunate delayed hemolysis with positive direct antiglobulin test in severe imported Plasmodium falciparum malaria, France.
International journal of infectious diseases: IJID: official publication of the International Society for Infectious Diseases 2023, 137, 144-148.

Tsopra R, Peiffer-Smadja N, Charlier C, Campeotto F, Lemogne C, Ruszniewski P, Vivien B, Burgun A
Putting undergraduate medical students in AI-CDSS designers' shoes: An innovative teaching method to develop digital health critical thinking.
International Journal of Medical Informatics 2023, 171, 104980.

Rousset P, Dalle S, Mortier L, Dereure O, Dalac S, Dutriaux C, Leccia MT, Legoupil D, Brunet-Possenti F, De Quatrebarbes J, Grob JJ, Saiag P, Maubec E, Stoebner PE, Granel-Brocard F, Arnault JP, Allayous C, Oriano B, Lebbe C, Montaudié H
Impact of systemic therapies in metastatic melanoma of unknown primary: A study from MELBASE, a French multicentric prospective cohort.
Journal of the American Academy of Dermatology 2023, 88, 808-815.

Mallart E, Françoise U, Driessen M, Blanche S, Lortholary O, Lefort A, Caseris M, Fischer A, Mahlaoui N, Charlier C, PREPI study group
Pregnancy in primary immunodeficiency diseases: The PREPI study.
The Journal of Allergy and Clinical Immunology 2023, 152, 760-770.

Mageau A, Tchen J, Ferré VM, Nicaise-Roland P, Descamps D, Delory N, François C, Mendes C, Papo T, Goulenok T, Charles N, Sacré K
Impact of BNT162b2 mRNA anti-SARS-CoV-2 vaccine on interferon-alpha production by plasmacytoid dendritic cells and autoreactive T cells in patients with systemic lupus erythematosus: The COVALUS project.
Journal of Autoimmunity 2023, 134, 102987.

Robert M, Berleur M, Gaudemer A, Crow YJ, Frémond ML, Sacré K
VEXAS syndrome: Expanding the clinical and molecular spectrum.
Joint Bone Spine 2023, 90, 105531.

Zuercher P, Moser A, Frey MC, Pagani JL, Buetti N, Eggimann P, Daneman N, Fowler R, Que YA, Prazak J
The effect of duration of antimicrobial treatment for bacteremia in critically ill patients on in-hospital mortality - Retrospective double center analysis.
Journal of Critical Care 2023, 74, 154257.

Hassold N, Brichler S, Gater Y, Leclerc D, Gordien E, Bouchaud O, Carbonnelle E, Mechai F, Cordel H, Delagreverie H
Mixed outcomes following a third SARS-CoV-2 vaccine dose in previously unresponsive people with HIV.
Journal of Clinical Virology: The Official Publication of the Pan American Society for Clinical Virology 2023, 158, 105347.

Brebant D, Couffignal C, Manchon P, Duquesne S, Picone O, Vauloup-Fellous C
Transplacental transfer of anti-SARS-CoV-2 neutralizing antibodies in comparison to other pathogens total antibodies.
Journal of Clinical Virology: The Official Publication of the Pan American Society for Clinical Virology 2023, 165, 105495.

Jousset AB, Bernabeu S, Emeraud C, Bonnin RA, Lomont A, Zahar JR, Merens A, Isnard C, Soismier N, Farfour E, Fihman V, Yin N, Barraud O, Jacquier H, Ranc AG, Laurent F, Corvec S, d'Epenoux LR, Bille E, Degand N, Plouzeau C, Guillard T, Cattoir V, Mizrahi A, Grillon A, Janvier F, Brun CL, Amara M, Bastide M, Lemonnier A, Dortet L, GMC-study Group
Evaluation of ceftolozane-tazobactam susceptibility on a French nationwide collection of Enterobacterales.
Journal of Global Antimicrobial Resistance 2023, 32, 78-84.

Caméléna F, Liberge M, Rezzoug I, Merimèche M, Naas T, Berçot B
In vitro activity of apramycin against 16S-RMTase-producing Gram-negative isolates.
Journal of Global Antimicrobial Resistance 2023, 33, 21-25.

Hachicha-Maalej N, Collins IJ, Ades AE, Scott K, Judd A, Mostafa A, Chappell E, Hamdy-El-Sayed M, Gibb D, Pett S, Mariné-Barjoan E, Volokha A, Yazdanpanah Y, Deuffic-Burban S
Modelling the potential effectiveness of hepatitis C screening and treatment strategies during pregnancy in Egypt and Ukraine.
Journal of Hepatology 2023, 78, 937-946.

Farfour E, Lebourgeois S, Chenane HR, Charpentier C, Pascreau T, Jolly E, Descamps D, Vasse M, Visseaux B
SARS-CoV-2 viability and viral RNA persistence on microbiological agar plates.
The Journal of Hospital Infection 2023, 132, 140-142.

Hassoun-Kheir N, Buetti N, Olivier V, Perez M, Frossard J, Renzi G, Schrenzel J, Saudan P, Harbarth S
Targeted mupirocin-based decolonization for Staphylococcus aureus carriers and the subsequent risk of mupirocin resistance in haemodialysis patients - a longitudinal study over 20 years.
The Journal of Hospital Infection 2023, 135, 55-58.

Henoun Loukili N, Loquet A, Perrin A, Gaillot O, Bruandet A, Sendid B, Zahar JR, Nseir S
Time to intestinal clearance of carbapenemase-producing Enterobacterales in hospital patients: a longitudinal retrospective observational cohort study.
The Journal of Hospital Infection 2023, 135, 4-10.

Halouani H, Lomont A, Jaureguy F, Carbonnelle E, Seytre D, Zahar JR
Interest of broth enrichment for rectal screening in a low carbapenemase-producing Enterobacterales prevalence country.
The Journal of Hospital Infection 2023, 138, 97-98.

Catho G, Rosa Mangeret F, Sauvan V, Chraïti MN, Pfister R, Baud O, Harbarth S, Buetti N
Risk of catheter-associated bloodstream infection by catheter type in a neonatal intensive care unit: a large cohort study of more than 1100 intravascular catheters.
The Journal of Hospital Infection 2023, 139, 6-10.

Smith DRM, Chervet S, Pinettes T, Shirreff G, Jijón S, Oodally A, Jean K, Opatowski L, Kernéis S, Temime L
How have mathematical models contributed to understanding the transmission and control of SARS-CoV-2 in healthcare settings? A systematic search and review.
The Journal of Hospital Infection 2023, 141, 132-141.

Legouge C, Bidet P, Gits-Muselli M, Cointe A, Courroux C, Birgy A, Bonacorsi S
Rapid, simple multi-locus variable number tandem repeat analysis: a reliable tool for Klebsiella pneumoniae outbreak screening.
The Journal of Hospital Infection 2023, 141, 41-48.

de Lamballerie X, Martin-Blondel G, Dupont A, Izopet J, Mentré F, Kamar N, Autran B, Paintaud G, Caillard S, le Bourgeois A, Richez C, Couzi L, Xhaard A, Marjanovic Z, Avouac J, Jacquet C, Anglicheau D, Cheminant M, Yazdanpanah Y, Guyen SN, Terrier B, Gottenberg JE, Besson C, Letrou S, Kali S, Angoulvant D, Sanchez VP, Tardivon C, Blancho G, Lévy V
Low serum neutralization of Omicron variants a month after AZD7442 prophylaxis initiation.
The Journal of Infection 2023, 86, 66-117.

Mellon G, Rubenstein E, Antoine M, Ferré VM, Gabassi A, Molina JM, Delaugerre C, LeGoff J
Air detection of monkeypox virus in a dedicated outpatient clinic room for monkeypox infection diagnosis.
The Journal of Infection 2023, 86, 256-308.

Bastien S, Meyers S, Salgado-Pabón W, Giulieri SG, Rasigade JP, Liesenborghs L, Kinney KJ, Couzon F, Martins-Simoes P, Moing VL, Duval X, Holmes NE, Bruun NE, Skov R, Howden BP, Fowler VG, Verhamme P, Andersen PS, Bouchiat C, Moreau K, Vandenesch F
All Staphylococcus aureus bacteraemia-inducing strains can cause infective endocarditis: Results of GWAS and experimental animal studies.
The Journal of Infection 2023, 86, 123-133.

Touret F, Martin-Blondel G, de Lamballerie X, Dupont A, Izopet J, Mentré F, Kamar N, Autran B, Paintaud G, Caillard S, Richez C, Couzi L, Xhaard A, Marjanovic Z, Avouac J, Jacquet C, Anglicheau D, Cheminant M, Yazdanpanah Y, N'Guyen S, Terrier B, Gottenberg JE, Besson C, Letrou S, Kali S, Angoulvant D, Barthélémy K, Priet S, Nurtop E, Sanchez VP, Tardivon C, Blancho G, Le Bourgeois A, Lévy V
Low to undetectable Omicron BQ.1.1 neutralization by patient's sera a month after initiation of AZD7442 600 mg.
The Journal of Infection 2023, 86, e126-e129.

Jacquier H, Assao B, Chau F, Guindo O, Condamine B, Magnan M, Bridier-Nahmias A, Sayingoza-Makombe N, Moumouni A, Page AL, Langendorf C, Coldiron ME, Denamur E, de Lastours V
Faecal carriage of extended-spectrum β-lactamase-producing Escherichia coli in a remote region of Niger.
The Journal of Infection 2023, 87, 199-209.

Kimseng H, Rossi G, Danjean M, Jimenez-Araya B, Chaligne C, Galy A, Souhail B, Bert F, Leflon V, Fihman V, Caillault A, Demontant V, Seng S, Trawinski E, N 'Debi M, Boizeau L, Jacquier H, Ronot M, Reizine E, Le Roy V, Lefort A, Rodriguez C, Lepeule R, Woerther PL
Evaluation of the contribution of shotgun metagenomics in the microbiological diagnosis of liver abscesses.
The Journal of Infection 2023, 87, 365-372.

Salvator M, Girault A, Sibiude J, Mandelbrot L, Goffinet F, Cohen E
Failed induction of labor in term nulliparous women with an unfavorable cervix: Comparison of cervical ripening by two forms of vaginal prostaglandins (slow-release pessary and vaginal gel).
Journal of Gynecology Obstetrics and Human Reproduction 2023, 52, 102546.

Picone O, Vivanti AJ, Sibiude J, Cordier AG, Alessandrini V, Kayem G, Borie C, Luton D, Manchon P, Couffignal C, Vauloup Fellous C, COVIPREG study group
SARS-COV-2 excretion and maternal-fetal transmission: Virological data of French prospective multi-center cohort study COVIPREG during the first wave.
Journal of Gynecology Obstetrics and Human Reproduction 2023, 52, 102547.

Labaye S, Peyronnet V, Coussement A, Mandelbrot L, Picone O
Contribution of amniocentesis in fetuses small for gestational age without other sonographic signs.
Journal of Gynecology Obstetrics and Human Reproduction 2023, 52, 102552.

Poisson M, Sibiude J, Mosnino E, Koual M, Landraud L, Fidouh N, Mandelbrot L, Vauloup-Fellous C, Luton D, Benachi A, Vivanti AJ, Picone O
Impact of variants of SARS-CoV-2 on obstetrical and neonatal outcomes.
Journal of Gynecology Obstetrics and Human Reproduction 2023, 52, 102566.

Vivanti AJ, Vauloup-Fellous C, Khalil A, Badr DA, Raimondi F, Salome S, Prasad S, Portella G, Fiorenza M, Jani JC, Landraud L, Picone O, Pezza L, Bourgeois-Nicolaos N, Cordier AG, Vedovelli L, De Luca D
Nasopharyngeal SARS-CoV-2 load and perinatal outcomes after maternal infection diagnosed close to delivery.
Journal of Gynecology Obstetrics and Human Reproduction 2023, 52, 102569.

Mauny L, Peyronnet V, Peynaud-Debayle E, Picone O, Nebout S, Mandelbrot L
Induction or spontaneous labor for pregnant patients on anticoagulants?.
Journal of Gynecology Obstetrics and Human Reproduction 2023, 52, 102623.

Tate B, Dussaux C, Mandelbrot L
Impact of extending criteria for home care management in Preterm Prelabor Rupture of Membranes.
Journal of Gynecology Obstetrics and Human Reproduction 2023, 52, 102638.

Lafay C, Assad Z, Ouldali N, Quoc EB, Clement A, Durand C, Fares S, Faye A, Eveillard LA, Kaguelidou F, Titah C, Valtuille Z, Vinit C, Meinzer U, Dumaine C
Increased Incidence of Pediatric Uveitis Associated with the COVID-19 Pandemic Occurring Before COVID-19 Vaccine Implementation: A Time-Series Analysis.
The Journal of Pediatrics 2023, 263, 113682.

Egloff C, Roques P, Picone O
Impact of COVID-19 on pregnant women's health: Consequences in obstetrics two years after the pandemic.
Journal of Reproductive Immunology 2023, 158, 103981.

Smadja DM, Rossi E, Haviari S, Bieche I, Cras A, Gaussem P
Thrombin receptor PAR1 silencing in endothelial colony-forming cells modifies stemness and vasculogenic properties.
Journal of thrombosis and haemostasis: JTH 2023, 21, 3640-3648.

Siebert M, Lhomme C, Carbonnelle E, Trésallet C, Kolakowska A, Jaureguy F
Microbiological epidemiology and antibiotic susceptibility of infected meshes after prosthetic abdominal wall repair.
Journal of Visceral Surgery 2023, 160, 85-89.

Pellenc Q, Renard R, Gaudemer A, Amarenco P, Lavallée P
Bypass grafting to the third segment of the vertebral artery for symptomatic extensive vertebrobasilar atherosclerotic disease.
Journal of Vascular Surgery Cases and Innovative Techniques 2023, 9, 101260.

Ouldali N, Deceuninck G, Lefebvre B, Gilca R, Quach C, Brousseau N, Tapiero B, De Wals P
Increase of invasive pneumococcal disease in children temporally associated with RSV outbreak in Quebec: a time-series analysis.
Lancet Regional Health. Americas 2023, 19, 100448.

Bébéar C, Pereyre S, Berçot B, Cazanave C
Managing bacterial sexually transmitted infections (STIs) and preventing HIV/STIs in Europe.
The Lancet Regional Health. Europe 2023, 34, 100760.

Brault A, Tran-Kiem C, Couteaux C, Olié V, Paireau J, Yazdanpanah Y, Ghosn J, Martin-Blondel G, Bosetti P, Cauchemez S
Modelling the end of a Zero-COVID strategy using nirmatrelvir/ritonavir, vaccination and NPIs in Wallis and Futuna.
The Lancet Regional Health. Western Pacific 2023, 30, 100634.

Tesson F, Bernheim A
Synergy and regulation of antiphage systems: toward the existence of a bacterial immune system?.
Current Opinion in Microbiology 2023, 71, 102238.

Roblot P, Belaroussi Y, Peiffer-Smadja N, Lafarge X, Cotto E, Colombat M, Blohorn L, Gardere M, Kerdiles G, Le Petit L, Wavasseur T, Liguoro D, Jecko V, Vignes JR
Effect of microorganisms isolated by preoperative osseous sampling on surgical site infection after autologous cranioplasty: A single-center experience.
Neuro-Chirurgie 2023, 69, 101458.

Boukobza M, Ilic-Habensus E, Duval X, Laissy JP
MRI of unruptured infectious intracranial aneurysms in infective endocarditis. A case-control study.
Journal of Neuroradiology = Journal De Neuroradiologie 2023, 50, 539-547.

Ardellier FD, Baloglu S, Sokolska M, Noblet V, Lersy F, Collange O, Ferré JC, Maamar A, Carsin-Nicol B, Helms J, Schenck M, Khalil A, Gaudemer A, Caillard S, Pottecher J, Lefèbvre N, Zorn PE, Matthieu M, Brisset JC, Boulay C, Mutschler V, Hansmann Y, Mertes PM, Schneider F, Fafi-Kremer S, Ohana M, Meziani F, Meyer N, Yousry T, Anheim M, Cotton F, Jäger HR, Kremer S, SFNR-COVID group
Cerebral perfusion using ASL in patients with COVID-19 and neurological manifestations: A retrospective multicenter observational study.
Journal of Neuroradiology = Journal De Neuroradiologie 2023, S0150-9861(23)00006-8.

Jouneau S, Ricard JD, Seguin-Givelet A, Bigé N, Contou D, Desmettre T, Hugenschmitt D, Kepka S, Gloan KL, Maitre B, Mangiapan G, Marchand-Adam S, Mariolo A, Marx T, Messika J, Noël-Savina E, Oberlin M, Palmier L, Perruez M, Pichereau C, Roche N, Garnier M, Martinez M
SPLF/SMFU/SRLF/SFAR/SFCTCV Guidelines for the management of patients with primary spontaneous pneumothorax: Endorsed by the French Speaking Society of Respiratory Diseases (SPLF), the French Society of Emergency Medicine (SFMU), the French Intensive Care Society (SRLF), the French Society of Anesthesia & Intensive Care Medicine (SFAR) and the French Society of Thoracic and Cardiovascular Surgery (SFCTCV).
Respiratory Medicine and Research 2023, 83, 100999.

Le Guen P, Tardivon C, Laouénan C, Debray MP, Nicaise Roland P, Taillé C, Borie R, Ottaviani S, Guenther A, Dieudé P, Crestani B
Anti-mutated citrullinated vimentin antibodies are increased in IPF patients.
Respiratory Medicine and Research 2023, 85, 101081.

Dauny V, Dioguardi-Burgio M, Leflon-Guibout V, Bert F, Roux O, Houzé S, Lefort A, Rossi G
[Clinical and radiological differences between amoebic and pyogenic liver abscess: A case-control study].
La Revue De Medecine Interne 2023, 44, 472-478.

Kherabi Y, Chazal T, Emile JF, Allaham W, Mallart E, de Lastours V, Haroche J, Nguyen Y
A recurrent pleuropneumonia revealing Erdheim-Chester Disease.
Respiratory Medicine Case Reports 2023, 43, 101843.

Jouneau S, Ricard JD, Seguin-Givelet A, Bigé N, Contou D, Desmettre T, Hugenschmitt D, Kepka S, Le Gloan K, Maitre B, Mangiapan G, Marchand-Adam S, Mariolo A, Marx T, Messika J, Noël-Savina E, Oberlin M, Palmier L, Perruez M, Pichereau C, Roche N, Garnier M, Martinez M, Sous l’égide de la SPLF, avec la collaboration de la SFMU, SRLF, SFCTCV et SFAR
[Guidelines for management of patients with primary spontaneous pneumothorax].
Revue Des Maladies Respiratoires 2023, 40, 265-301.

Griffee MJ, Bozza PT, Reyes LF, Eddington DP, Rosenberger D, Merson L, Citarella BW, Fanning JP, Alexander PMA, Fraser J, Dalton H, Cho SM, ISARIC Clinical Characterisation Group
Thrombotic and hemorrhagic complications of COVID-19 in adults hospitalized in high-income countries compared with those in adults hospitalized in low- and middle-income countries in an international registry.
Research and Practice in Thrombosis and Haemostasis 2023, 7, 102142.

Barbier E, Fouchet T, Hartmann A, Cambau E, Mougari F, Dubois C, Lubetzki M, Rochelet M
Rapid electrochemical detection of Mycobacterium tuberculosis in sputum by measuring Ag85 activity with disposable carbon sensors.
Talanta 2023, 253, 123927.

Ballul T, Mageau A, Roland Nicaise P, Ajzenberg N, Strukov A, Dossier A, Rouzaud D, Papo T, Sacré K
Recurrent thrombotic events after disappearance of antiphospholipid autoantibodies: A long-term longitudinal study in patients with antiphospholipid syndrome.
Thrombosis Research 2023, 224, 1-3.

Goedegebuur J, Abbel D, Accassat S, Achterberg WP, Akbari A, Arfuch VM, Baddeley E, Bax JJ, Becker D, Bergmeijer B, Bertoletti L, Blom JW, Calvetti A, Cannegieter SC, Castro L, Chavannes NH, Coma-Auli N, Couffignal C, Edwards A, Edwards M, Enggaard H, Font C, Gava A, Geersing GJ, Geijteman ECT, Greenley S, Gregory C, Gussekloo J, Hoffmann I, Højen AA, van den Hout WB, Huisman MV, Jacobsen S, Jagosh J, Johnson MJ, Jørgensen L, Juffermans CCM, Kempers EK, Konstantinides S, Kroder AF, Kruip MJHA, Lafaie L, Langendoen JW, Larsen TB, Lifford K, van der Linden YM, Mahé I, Maiorana L, Maraveyas A, Martens ESL, Mayeur D, van Mens TE, Mohr K, Mooijaart SP, Murtagh FEM, Nelson A, Nielsen PB, Ording AG, Ørskov M, Pearson M, Poenou G, Portielje JEA, Raczkiewicz D, Rasmussen K, Trinks-Roerdink E, Schippers I, Seddon K, Sexton K, Sivell S, Skjøth F, Søgaard M, Szmit S, Trompet S, Vassal P, Visser C, van Vliet LM, Wilson E, Klok FA, Noble SIR
Towards optimal use of antithrombotic therapy of people with cancer at the end of life: A research protocol for the development and implementation of the SERENITY shared decision support tool.
Thrombosis Research 2023, 228, 54-60.

Gros C, Barral T, Mageau A, Roland Nicaise P, Vivier V, Papo T, Bourgeois-Moine A, Goulenok T, Sacre K
Unexplained fetal death, pre-eclampsia and fetal growth restriction in pregnancy: Who is screened for antiphospholipid syndrome?.
Thrombosis Research 2023, 228, 61-63.

Quagliaro P, Dziri S, Magdoud El Alaoui F, Saint Louis P, de Pontual L, Marin J, Carbonnelle E, Billard-Pomares T
Performances of bioinformatics tools for the analysis of sequencing data of Mycobacterium tuberculosis complex strains.
Tuberculosis (Edinburgh, Scotland) 2023, 139, 102324.

Senelle G, Guyeux C, Refrégier G, Sola C
Towards a better understanding of the long-lasting evolutionary history of Mycobacterium tuberculosis.
Tuberculosis (Edinburgh, Scotland) 2023, 143S, 102374.

Senelle G, Sahal MR, La K, Billard-Pomares T, Marin J, Mougari F, Bridier-Nahmias A, Carbonnelle E, Cambau E, Refrégier G, Guyeux C, Sola C
Towards the reconstruction of a global TB history using a new pipeline "TB-Annotator".
Tuberculosis (Edinburgh, Scotland) 2023, 143S, 102376.

Zein-Eddine R, Hak F, Le Meur A, Genestet C, Dumitrescu O, Guyeux C, Senelle G, Sola C, Refrégier G
The paradoxes of Mycobacterium tuberculosis molecular evolution and consequences for the inference of tuberculosis emergence date.
Tuberculosis (Edinburgh, Scotland) 2023, 143S, 102378.

Pálfi G, Dutour O, Hajdu T, Sola C, Zink A
Paleopathology and evolution of tuberculosis editorial.
Tuberculosis (Edinburgh, Scotland) 2023, 143S, 102428.

Kolakowska A, Brichler S, Delagrèverie H, Marin J, Alloui AC, Cailhol J
Cross sectional survey of Varicella-Zoster virus and measles seropositivity in people living with HIV in a Parisian suburb and a review of current immunization guidelines.
Vaccine 2023, 41, 3266-3274.

Coppée R, Chenane HR, Bridier-Nahmias A, Tcherakian C, Catherinot E, Collin G, Lebourgeois S, Visseaux B, Descamps D, Vasse M, Farfour E
Temporal dynamics of RSV shedding and genetic diversity in adults during the COVID-19 pandemic in a French hospital, early 2021.
Virus Research 2023, 323, 198950.

Lefrançois T, Malvy D, Atlani-Duault L, Benamouzig D, Druais PL, Yazdanpanah Y, Delfraissy JF, Lina B
After 2 years of the COVID-19 pandemic, translating One Health into action is urgent.
Lancet (London, England) 2023, 401, 789-794.

Mitjà O, Alemany A, Marks M, Lezama Mora JI, Rodríguez-Aldama JC, Torres Silva MS, Corral Herrera EA, Crabtree-Ramirez B, Blanco JL, Girometti N, Mazzotta V, Hazra A, Silva M, Montenegro-Idrogo JJ, Gebo K, Ghosn J, Peña Vázquez MF, Matos Prado E, Unigwe U, Villar-García J, Wald-Dickler N, Zucker J, Paredes R, Calmy A, Waters L, Galvan-Casas C, Walmsley S, Orkin CM, SHARE-NET writing group
Mpox in people with advanced HIV infection: a global case series.
Lancet (London, England) 2023, 401, 939-949.

Suñer C, Ubals M, Tarín-Vicente EJ, Mendoza A, Alemany A, Hernández-Rodríguez Á, Casañ C, Descalzo V, Ouchi D, Marc A, Rivero À, Coll P, Oller X, Miguel Cabrera J, Vall-Mayans M, Dolores Folgueira M, Ángeles Melendez M, Agud-Dios M, Gil-Cruz E, Paris de Leon A, Ramírez Marinero A, Buhiichyk V, Galván-Casas C, Paredes R, Prat N, Sala Farre MR, Bonet-Simó JM, Farré M, Ortiz-Romero PL, Clotet B, García-Patos V, Casabona J, Guedj J, Cardona PJ, Blanco I, Movie Group, Marks M, Mitjà O
Viral dynamics in patients with monkeypox infection: a prospective cohort study in Spain.
The Lancet. Infectious Diseases 2023, 23, 445-453.

Beaumont AL, Raphaël E, Bertin C, Lariven S, Peiffer-Smadja N
Mpox lesions on a tattoo.
The Lancet. Infectious Diseases 2023, 23, 762.

Beaumont AL, Peiffer-Smadja N
Mpox: a new name for a new disease?.
The Lancet. Infectious Diseases 2023, 23, 516-517.

Domínguez J, Boeree MJ, Cambau E, Chesov D, Conradie F, Cox V, Dheda K, Dudnyk A, Farhat MR, Gagneux S, Grobusch MP, Gröschel MI, Guglielmetti L, Kontsevaya I, Lange B, van Leth F, Lienhardt C, Mandalakas AM, Maurer FP, Merker M, Miotto P, Molina-Moya B, Morel F, Niemann S, Veziris N, Whitelaw A, Horsburgh CR, Lange C, TBnet and RESIST-TB networks
Clinical implications of molecular drug resistance testing for Mycobacterium tuberculosis: a 2023 TBnet/RESIST-TB consensus statement.
The Lancet. Infectious Diseases 2023, 23, e122-e137.

Amstutz A, Speich B, Mentré F, Rueegg CS, Belhadi D, Assoumou L, Burdet C, Murthy S, Dodd LE, Wang Y, Tikkinen KAO, Ader F, Hites M, Bouscambert M, Trabaud MA, Fralick M, Lee TC, Pinto R, Barratt-Due A, Lund-Johansen F, Müller F, Nevalainen OPO, Cao B, Bonnett T, Griessbach A, Taji Heravi A, Schönenberger C, Janiaud P, Werlen L, Aghlmandi S, Schandelmaier S, Yazdanpanah Y, Costagliola D, Olsen IC, Briel M
Effects of remdesivir in patients hospitalised with COVID-19: a systematic review and individual patient data meta-analysis of randomised controlled trials.
The Lancet. Respiratory Medicine 2023, 11, 453-464.

Reignier J, Plantefeve G, Mira JP, Argaud L, Asfar P, Aissaoui N, Badie J, Botoc NV, Brisard L, Bui HN, Chatellier D, Chauvelot L, Combes A, Cracco C, Darmon M, Das V, Debarre M, Delbove A, Devaquet J, Dumont LM, Gontier O, Groyer S, Guérin L, Guidet B, Hourmant Y, Jaber S, Lambiotte F, Leroy C, Letocart P, Madeux B, Maizel J, Martinet O, Martino F, Maxime V, Mercier E, Nay MA, Nseir S, Oziel J, Picard W, Piton G, Quenot JP, Reizine F, Renault A, Richecoeur J, Rigaud JP, Schneider F, Silva D, Sirodot M, Souweine B, Tamion F, Terzi N, Thévenin D, Thiery G, Thieulot-Rolin N, Timsit JF, Tinturier F, Tirot P, Vanderlinden T, Vinatier I, Vinsonneau C, Voicu S, Lascarrou JB, Le Gouge A, NUTRIREA-3 Trial Investigators, Clinical Research in Intensive Care, Sepsis (CRICS-TRIGGERSEP)Group
Low versus standard calorie and protein feeding in ventilated adults with shock: a randomised, controlled, multicentre, open-label, parallel-group trial (NUTRIREA-3).
The Lancet. Respiratory Medicine 2023, 11, 602-612.

Charani E, Mendelson M, Pallett SJC, Ahmad R, Mpundu M, Mbamalu O, Bonaconsa C, Nampoothiri V, Singh S, Peiffer-Smadja N, Anton-Vazquez V, Moore LSP, Schouten J, Kostyanev T, Vlahović-Palčevski V, Kofteridis D, Corrêa JS, Holmes AH
An analysis of existing national action plans for antimicrobial resistance-gaps and opportunities in strategies optimising antibiotic use in human populations.
The Lancet. Global Health 2023, 11, e466-e474.

Ogbuagu O, Segal-Maurer S, Ratanasuwan W, Avihingsanon A, Brinson C, Workowski K, Antinori A, Yazdanpanah Y, Trottier B, Wang H, Margot N, Dvory-Sobol H, Rhee MS, Baeten JM, Molina JM, GS-US-200-4625 investigators
Efficacy and safety of the novel capsid inhibitor lenacapavir to treat multidrug-resistant HIV: week 52 results of a phase 2/3 trial.
The lancet. HIV 2023, 10, e497-e505.

Guémas E, Coppée R, Ménard S, du Manoir M, Nsango S, Makaba Mvumbi D, Nakoune E, Eboumbou Moukoko CE, Bouyou Akotet MK, Mirabeau TY, Manguin S, Malekita Yobi D, Akiana J, Kouna LC, Mawili Mboumba DP, Voumbo-Matoumona DF, Otam AL, Rubbo PA, Lombart JP, Kwanai E, Cohen O, Iriart X, Ayong L, Lekana-Douki JB, Ariey F, Berry A
Evolution and spread of Plasmodium falciparum mutations associated with resistance to sulfadoxine-pyrimethamine in central Africa: a cross-sectional study.
The Lancet. Microbe 2023, S2666-5247(23)00211-2.

Landelle C, Birgand G, Price JR, Mutters NT, Morgan DJ, Lucet JC, Kerneis S, Zingg W
Considerations for de-escalating universal masking in healthcare centers.
Antimicrobial stewardship & healthcare epidemiology: ASHE 2023, 3, e128.

Faury HB, Awad Z, Jolivet S, Le Neindre K, Couturier J, Godmer A, Colle R, Levi LI, Cambau E, Barbut F
Investigation of a Mycobacterium fortuitum catheter-related bloodstream infection in an oncology unit.
Infection Control and Hospital Epidemiology 2023, 1-3.

Yokoe DS, Advani SD, Anderson DJ, Babcock HM, Bell M, Berenholtz SM, Bryant KA, Buetti N, Calderwood MS, Calfee DP, Dubberke ER, Ellingson KD, Fishman NO, Gerding DN, Glowicz J, Hayden MK, Kaye KS, Klompas M, Kociolek LK, Landon E, Larson EL, Malani AN, Marschall J, Meddings J, Mermel LA, Patel PK, Perl TM, Popovich KJ, Schaffzin JK, Septimus E, Trivedi KK, Weinstein RA, Maragakis LL
Executive Summary: A Compendium of Strategies to Prevent Healthcare-Associated Infections in Acute-Care Hospitals: 2022 Updates.
Infection Control and Hospital Epidemiology 2023, 44, 1540-1554.

Grant RL, Sauser J, Atkinson A, D'Incau S, Buetti N, Zanella MC, Harbarth S, Marschall J, Catho G, CH-SUR Collaborative Network
Comparison of clinical outcomes over time of inpatients with healthcare-associated or community-acquired coronavirus disease 2019 (COVID-19): A multicenter, prospective cohort study.
Infection Control and Hospital Epidemiology 2023, 1-7.

Yokoe DS, Advani SD, Anderson DJ, Babcock HM, Bell M, Berenholtz SM, Bryant KA, Buetti N, Calderwood MS, Calfee DP, Deloney VM, Dubberke ER, Ellingson KD, Fishman NO, Gerding DN, Glowicz J, Hayden MK, Kaye KS, Kociolek LK, Landon E, Larson EL, Malani AN, Marschall J, Meddings J, Mermel LA, Patel PK, Perl TM, Popovich KJ, Schaffzin JK, Septimus E, Trivedi KK, Weinstein RA, Maragakis LL
Introduction to A Compendium of Strategies to Prevent Healthcare-Associated Infections In Acute-Care Hospitals: 2022 Updates.
Infection Control and Hospital Epidemiology 2023, 44, 1533-1539.

Garrouste-Orgeas M, Marché V, Pujol N, Michel D, Evin A, Fossez-Diaz V, Perruchio S, Vanbésien A, Verlaine C, Copel L, Kaczmarek W, Birkui de Francqueville L, Michonneau-Gandon V, de Larivière E, Poupardin C, Touzet L, Guastella V, Mathias C, Mhalla A, Bouquet G, Richard B, Gracia D, Bienfait F, Verliac V, Ranchou G, Kirsch S, Flahault C, Loiodice A, Bailly S, Ruckly S, Timsit JF
Incidence and risk factors of prolonged grief in relatives of patients with terminal cancer in French palliative care units: The Fami-Life multicenter cohort study.
Palliative & Supportive Care 2023, 1-10.

Bruno R, Chanu P, Kågedal M, Mercier F, Yoshida K, Guedj J, Li C, Beyer U, Jin JY
Support to early clinical decisions in drug development and personalised medicine with checkpoint inhibitors using dynamic biomarker-overall survival models.
British Journal of Cancer 2023

Le Hingrat Q, Sette P, Xu C, Rahmberg AR, Tarnus L, Annapureddy H, Kleinman A, Brocca-Cofano E, Sivanandham R, Sivanandham S, He T, Capreri DJ, Ma D, Estes JD, Brenchley JM, Apetrei C, Pandrea I
Prolonged experimental CD4+ T-cell depletion does not cause disease progression in SIV-infected African green monkeys.
Nature Communications 2023, 14, 979.

Royer G, Clermont O, Marin J, Condamine B, Dion S, Blanquart F, Galardini M, Denamur E
Epistatic interactions between the high pathogenicity island and other iron uptake systems shape Escherichia coli extra-intestinal virulence.
Nature Communications 2023, 14, 3667.

Choudhury A, Gachet B, Dixit Z, Faure R, Gill RT, Tenaillon O
Deep mutational scanning reveals the molecular determinants of RNA polymerase-mediated adaptation and tradeoffs.
Nature Communications 2023, 14, 6319.

Amor DR
Smooth functional landscapes in microcosms.
Nature Ecology & Evolution 2023, 7, 1754-1755.

COVID-19 Host Genetics Initiative
A second update on mapping the human genetic architecture of COVID-19.
Nature 2023, 621, E7-E26.

Telford E, Grinsztejn B, Olsen IC, Pulik N, Mentré F, Haviari S, Hentzien M, Ségéral O, Ekkelenkamp MB, Ogoina D, Strub-Wourgaft N, Diallo A, Yazdanpanah Y, Calmy A
The international Unity study for antivirals against mpox is a blueprint for future epidemics.
Nature Medicine 2023, 29, 1894-1895.

Mirouse A, Friol A, Moreau AS, Jung B, Jullien E, Bureau C, Djibré M, de Prost N, Zafrani L, Argaud L, Reuter D, Calvet L, de Montmollin E, Benghanem S, Pichereau C, Pham T, Cacoub P, Biard L, Saadoun D
Severe SARS-Cov2 pneumonia in vaccinated patients: a multicenter cohort study.
Scientific Reports 2023, 13, 1902.

Baud A, Hillion KH, Plainvert C, Tessier V, Tazi A, Mandelbrot L, Poyart C, Kennedy SP
Microbial diversity in the vaginal microbiota and its link to pregnancy outcomes.
Scientific Reports 2023, 13, 9061.

de Roquetaillade C, Laouenan C, Mira JP, Roy C, Thuong M, Azoulay É, Gruson D, Jacobs F, Chommeloux J, Raffi F, Hocqueloux L, Imbert P, Jeantils V, Delassus JL, Matheron S, Fitting C, Timsit JF, Bruneel F
Cytokine profiles in adults with imported malaria.
Scientific Reports 2023, 13, 10347.

Napier G, Couvin D, Refrégier G, Guyeux C, Meehan CJ, Sola C, Campino S, Phelan J, Clark TG
Comparison of in silico predicted Mycobacterium tuberculosis spoligotypes and lineages from whole genome sequencing data.
Scientific Reports 2023, 13, 11368.

Ongenae V, Kempff A, van Neer V, Shomar H, Tesson F, Rozen D, Briegel A, Claessen D
Genome sequence and characterization of Streptomyces phages Vanseggelen and Verabelle, representing two new species within the genus Camvirus.
Scientific Reports 2023, 13, 20153.

Arnaud E, Elbattah M, Ammirati C, Dequen G, Ghazali DA
Predictive models in emergency medicine and their missing data strategies: a systematic review.
NPJ digital medicine 2023, 6, 28.

Nagle S, Roland-Nicaise P, Klein I, Bendid Y, Tubiana S, Papo T, Duval X, Iung B, Sacré K, IMAGE Study Group
Antiphospholipid Autoantibodies and Brain Ischemic Lesions in Infective Endocarditis.
Thrombosis and Haemostasis 2023, 123, 568-572.

Dequin PF, Meziani F, Quenot JP, Kamel T, Ricard JD, Badie J, Reignier J, Heming N, Plantefève G, Souweine B, Voiriot G, Colin G, Frat JP, Mira JP, Barbarot N, François B, Louis G, Gibot S, Guitton C, Giacardi C, Hraiech S, Vimeux S, L'Her E, Faure H, Herbrecht JE, Bouisse C, Joret A, Terzi N, Gacouin A, Quentin C, Jourdain M, Leclerc M, Coffre C, Bourgoin H, Lengellé C, Caille-Fénérol C, Giraudeau B, Le Gouge A, CRICS-TriGGERSep Network
Hydrocortisone in Severe Community-Acquired Pneumonia.
The New England Journal of Medicine 2023, 388, 1931-1941.

Nguyen Y, Nuzzo A, Gross A, Minka O, Lilamand M, Rossi G, Sanchez M, Legué C, Pourbaix A, Tran Dinh A, Rozencwajg S, Khider L, Peiffer-Smadja N, Bouzid D, Faye A, Mirault T, de Lastours V
Prior participation as a standardized patient improves OSCE scores of third-year medical students: A pilot comparative study at Université Paris Cité Medical School.
Medical Teacher 2023, 45, 1177-1182.

Mageau A, Ambert-Balay K, Boutolleau D, Schuffenecker I, Burrel S, Kaplon J, Nguyen Quoc S, Uzunov M, Souchet L, de Rougemont A, Roos-Weil D, Baron M
Norovirus and sapovirus infections after allogeneic hematopoietic stem cell transplantation: is it worth it to look for them?.
Leukemia & Lymphoma 2023, 64, 1295-1303.

Claudet I, Caula C, Gallart JC, Tourniaire G, Lerouge-Bailhache M, Michard-Lenoir AP, Tran A, Maleterre A, Huet F, Dufour D, Billaud N, David A, Di Patrizio M, Granjon M, Benoist G, Laguille C, Guitteny MA, Balençon M, Vrignaud B, Basmaci R, Dampfhoffer M, Dubos F, Chappuy H, Minodier P, Médiamolle N, Bréhin C
A French study of cocaine intoxication/exposure in children (2010-2020).
Clinical Toxicology (Philadelphia, Pa.) 2023, 61, 370-378.

Chabrol F, Traverson L, Hou R, Chotard L, Lucet JC, Peiffer-Smadja N, Bendjelloul G, Lescure FX, Yazdanpanah Y, Zinszer K, Ridde V
Adaptation and Response of a Major Parisian Referral Hospital to the COVID-19 Surge: A Qualitative Study.
Health Systems and Reform 2023, 9, 2165429.

Dagenais C, Kielende M, Coulibaly A, Gautier L, David PM, Peiffer-Smadja N, Honda A, de Araújo Oliveira SR, Traverson L, Zinszer K, Ridde V
Lessons Learned from Field Experiences on Hospitals' Resilience to the COVID-19 Pandemic: A Systematic Approach.
Health Systems and Reform 2023, 9, 2231644.

Tattevin P, Muñoz P, Moreno A, Hékimian G, Delahaye F, Duval X, Castel MÁ, Hasse B, Jaramillo N, Vincelj J, Wray D, Limonta S, Fariñas MC, Mestres CA, Miro JM
Heart transplantation as salvage treatment of intractable infective endocarditis.
Infectious Diseases (London, England) 2023, 55, 370-374.

Nguyen LBL, Soumah AA, Hoang VT, Nguyen AT, Pham TH, Royer-Devaux S, Madec Y
Performances of Dried Blood Spots and Point-of-Care Devices to Identify Virological Failure in HIV-Infected Patients: A Systematic Review and Meta-Analysis.
AIDS patient care and STDs 2023, 37, 66-83.

Boukobza M, Ilic-Habensus E, Duval X, Laissy JP
Letter to the Editor: Multiple Brain Abscesses in Hemophilus parainfluenzae Endocarditis: A Case Report.
Surgical Infections 2023, 24, 501-504.

Bertin C, Tarhini H, Rahi M, Deconinck L, Perrineau S, Merlant M, Ghosn J, Peiffer-Smadja N
Complicated scarring following mpox infection.
The British Journal of Dermatology 2023, 189, 225-226.

Cho SM, White N, Premraj L, Battaglini D, Fanning J, Suen J, Bassi GL, Fraser J, Robba C, Griffee M, Singh B, Citarella BW, Merson L, Solomon T, Thomson D, ISARIC Clinical Characterisation Group
Neurological manifestations of COVID-19 in adults and children.
Brain: A Journal of Neurology 2023, 146, 1648-1661.

Lutz W, Bertin C, Merlant M, Mailhe M, Le Hingrat Q, Descamps V, Guilhou T, Maisonobe L, Yazdanpanah Y, Deschamps L, Charpentier C, Lariven S
Mpox presenting as a chronic cutaneous ulcer in a patient with advanced HIV infection.
Clinical and Experimental Dermatology 2023, llad258.

Sibiude J, Le Chenadec J, Mandelbrot L, Hoctin A, Dollfus C, Faye A, Bui E, Pannier E, Ghosn J, Garrait V, Avettand-Fenoel V, Frange P, Warszawski J, Tubiana R
Update of Perinatal Human Immunodeficiency Virus Type 1 Transmission in France: Zero Transmission for 5482 Mothers on Continuous Antiretroviral Therapy From Conception and With Undetectable Viral Load at Delivery.
Clinical Infectious Diseases: An Official Publication of the Infectious Diseases Society of America 2023, 76, e590-e598.

Coppée R, Sarrasin V, Zaffaroulah R, Bouzayene A, Thellier M, Noël H, Clain J, Houzé S, Investigation Study Group
Nosocomial Malaria Transmissions Resolved by Genomic Analyses-A Retrospective Case Report Study in France: 2007-2021.
Clinical Infectious Diseases: An Official Publication of the Infectious Diseases Society of America 2023, 76, 631-639.

Chalali F, Merlant M, Truong A, Ghosn J, Phung BC, Mollo B, Perrineau S, Rahi M, Fidouh-Houhou N, Ferré VM, Brunet-Possenti F, Descamps V, Bouscarat F, Yazdanpanah Y, Deschamps L, Bertin C
Histological Features Associated With Human Mpox Virus Infection in 2022 Outbreak in a Nonendemic Country.
Clinical Infectious Diseases: An Official Publication of the Infectious Diseases Society of America 2023, 76, 1132-1135.

de Salazar A, Viñuela L, Fuentes A, Teyssou E, Charpentier C, Lambert-Niclot S, Serrano-Conde E, Pingarilho M, Fabeni L, De Monte A, Stefic K, Perno CF, Aguilera A, Falces I, Delgado R, Fernandes S, Diogo I, Gomes P, Paraskevis D, Santoro MM, Ceccherini-Silberstein F, Marcelin AG, Garcia F
Transmitted Drug Resistance to Integrase-Based First-Line Human Immunodeficiency Virus Antiretroviral Regimens in Mediterranean Europe.
Clinical Infectious Diseases: An Official Publication of the Infectious Diseases Society of America 2023, 76, 1628-1635.

Lafaurie M, Chevret S, Fontaine JP, Mongiat-Artus P, de Lastours V, Escaut L, Jaureguiberry S, Bernard L, Bruyere F, Gatey C, Abgrall S, Ferreyra M, Aumaitre H, Aparicio C, Garrait V, Meyssonnier V, Bourgarit-Durand A, Chabrol A, Piet E, Talarmin JP, Morrier M, Canoui E, Charlier C, Etienne M, Pacanowski J, Grall N, Desseaux K, Empana-Barat F, Madeleine I, Bercot B, Molina JM, Lefort A, PROSTASHORT Study Group
Antimicrobial for 7 or 14 Days for Febrile Urinary Tract Infection in Men: A Multicenter Noninferiority Double-Blind, Placebo-Controlled, Randomized Clinical Trial.
Clinical Infectious Diseases: An Official Publication of the Infectious Diseases Society of America 2023, 76, 2154-2162.

Laurent C, Yaya I, Cuer B, Sagaon-Teyssier L, Mensah E, Dah TTE, Coulibaly A, Kouamé MJB, Peytavin G, Serrano L, Eubanks A, Traoré I, Diallo F, Riegel L, Rojas Castro D, Dagnra CA, Anoma C, Vuylsteke B, Dembélé Keita B, Spire B, CohMSM-PrEP Study Group
Human Immunodeficiency Virus Seroconversion Among Men Who Have Sex With Men Who Use Event-Driven or Daily Oral Pre-Exposure Prophylaxis (CohMSM-PrEP): A Multi-Country Demonstration Study From West Africa.
Clinical Infectious Diseases: An Official Publication of the Infectious Diseases Society of America 2023, 77, 606-614.

Fowler VG, Durack DT, Selton-Suty C, Athan E, Bayer AS, Chamis AL, Dahl A, DiBernardo L, Durante-Mangoni E, Duval X, Fortes CQ, Fosbøl E, Hannan MM, Hasse B, Hoen B, Karchmer AW, Mestres CA, Petti CA, Pizzi MN, Preston SD, Roque A, Vandenesch F, van der Meer JTM, van der Vaart TW, Miro JM
The 2023 Duke-International Society for Cardiovascular Infectious Diseases Criteria for Infective Endocarditis: Updating the Modified Duke Criteria.
Clinical Infectious Diseases: An Official Publication of the Infectious Diseases Society of America 2023, 77, 518-526.

Cotto O, Armand-Lefèvre L, Matheron S, Ruppé E, Blanquart F
Within-Host Dynamics and Duration of Colonization of Travel-Acquired Multidrug-Resistant Enterobacterales in Untreated Individuals.
Clinical Infectious Diseases: An Official Publication of the Infectious Diseases Society of America 2023, 77, 934-936.

Régis C, Thy M, Mahida B, Deconinck L, Tubiana S, Iung B, Duval X, Rouzet F
Absence of infective endocarditis relapse when end-of-treatment fluorodeoxyglucose positron emission tomography/computed tomography is negative.
European Heart Journal. Cardiovascular Imaging 2023, 24, 1480-1488.

Stern J, Dupuis C, Kpeglo H, Reuter J, Vinclair C, Para M, Nataf P, Pelletier AL, de Montmollin E, Bouadma L, Timsit JF, Sonneville R
Upper gastrointestinal bleeding in adults treated with veno-arterial extracorporeal membrane oxygenation: a cohort study.
European Journal of Cardio-Thoracic Surgery: Official Journal of the European Association for Cardio-Thoracic Surgery 2023, 63, ezad083.

Eslier M, Deneux-Tharaux C, Schmitz T, Luton D, Mandelbrot L, Estellat C, Radjack R, Azria E
Association between language barrier and inadequate prenatal care utilization among migrant women in the PreCARE prospective cohort study.
European Journal of Public Health 2023, 33, 403-410.

Pineros N, Tenaillon K, Marin J, Berry V, Jaureguy F, Ghelfenstein-Ferreira T, Carbonnelle E, Lescat M
Using gamification to improve engagement and learning outcomes in medical microbiology: the case study of 'BacteriaGame'.
FEMS microbiology letters 2023, 370, fnad034.

von Cube M, Schumacher M, Timsit JF, Decruyenaere J, Steen J
The population-attributable fraction for time-to-event data.
International Journal of Epidemiology 2023, 52, 837-845.

Kartsonaki C, Baillie JK, Barrio NG, Baruch J, Beane A, Blumberg L, Bozza F, Broadley T, Burrell A, Carson G, Citarella BW, Dagens A, Dankwa EA, Donnelly CA, Dunning J, Elotmani L, Escher M, Farshait N, Goffard JC, Gonçalves BP, Hall M, Hashmi M, Sim Lim Heng B, Ho A, Jassat W, Pedrera Jiménez M, Laouenan C, Lissauer S, Martin-Loeches I, Mentré F, Merson L, Morton B, Munblit D, Nekliudov NA, Nichol AD, Singh Oinam BC, Ong D, Panda PK, Petrovic M, Pritchard MG, Ramakrishnan N, Ramos GV, Roger C, Sandulescu O, Semple MG, Sharma P, Sigfrid L, Somers EC, Streinu-Cercel A, Taccone F, Vecham PK, Kumar Tirupakuzhi Vijayaraghavan B, Wei J, Wils EJ, Ci Wong X, Horby P, Rojek A, Olliaro PL, ISARIC Clinical Characterisation Group
Characteristics and outcomes of an international cohort of 600 000 hospitalized patients with COVID-19.
International Journal of Epidemiology 2023, 52, 355-376.

Joste V, Colard-Itté E, Guillochon É, Ariey F, Coppée R, Clain J, Houzé S, French National Reference Center for Imported Malaria Study Group
Genetic Profiling of Plasmodium ovale wallikeri Relapses With Microsatellite Markers and Whole-Genome Sequencing.
The Journal of Infectious Diseases 2023, 228, 1089-1098.

Guilbaud R, Franco Yusti AM, Leducq V, Zafilaza K, Bridier-Nahmias A, Todesco E, Soulie C, Fauchois A, Le Hingrat Q, Kramer L, Goulenok T, Salpin M, Daugas E, Dorent R, Ottaviani S, Zalcman G, Ghosn J, Choquet S, Cacoub P, Amoura Z, Barroux B, Pourcher V, Spano JP, Louet M, Marcelin AG, Calvez V, Charpentier C, Descamps D, Marot S, Ferré VM, Coppée R
Higher levels of SARS-CoV-2 genetic variation in immunocompromised patients: a retrospective case-control study.
The Journal of Infectious Diseases 2023, jiad499.

Leducq V, Zafilaza K, Fauchois A, Ghidaoui E, Sayon S, Dorival C, Meledje ML, Lusivika-Nzinga C, Yordanov Y, Martin-Blondel G, Carrat F, Marcelin AG, Soulie C, COCOPREV Study Group
Spike protein genetic evolution in patients at high-risk of severe COVID-19 treated by monoclonal antibodies.
The Journal of Infectious Diseases 2023, jiad523.

Bachelard A, Isernia V, Charpentier C, Benalycherif A, Mora M, Donadille C, Duvivier C, Lacombe K, El Mouhebb M, Spire B, Landman R, Descamps D, Peytavin G, Assoumou L, Ghosn J, FAST study group
Same-day initiation of bictegravir/emtricitabine/tenofovir alafenamide: Week 48 results of the FAST study-IMEA 055.
The Journal of Antimicrobial Chemotherapy 2023, 78, 769-778.

Lafaurie M, Montlahuc C, Kerneis S, de Lastours V, Abgrall S, Manceron V, Couzigou C, Chabrol A, de Raigniac A, Lescure X, Longuet P, Lesprit P, Vanjak D, Lepeule R, Groupe des référents en Infectiologie d’Ile de France (GRIF)
Efficacy of vancomycin lock therapy for totally implantable venous access port-related infection due to coagulase-negative staphylococci in 100 patients with cancer.
The Journal of Antimicrobial Chemotherapy 2023, 78, 1253-1258.

Armenia D, Santoro MM, Charpentier C, Bertoli A, Forbici F, Calvez V, Descamps D, Ceccherini-Silberstein F, Marcelin AG, Flandre P
Evaluation of integrase resistance in individuals who failed a regimen containing dolutegravir in French and Italian clinical settings.
The Journal of Antimicrobial Chemotherapy 2023, 78, 1415-1422.

Lambert-Niclot S, Abdi B, Bellet J, Fofana D, De Truchis P, Amat K, Alvarez JC, Surgers L, Allavena C, Zaegell-Faucher O, Morlat P, Palich R, Gibowski S, Costagliola D, Girard PM, Landman R, Assoumou L, Morand-Joubert L, ANRS 170 QUATUOR study group
Four days/week antiretroviral maintenance strategy (ANRS 170 QUATUOR): substudies of reservoirs and ultrasensitive drug resistance.
The Journal of Antimicrobial Chemotherapy 2023, 78, 1510-1521.

Mandelbrot L, Tubiana R, Frange P, Peytavin G, Le Chenadec J, Canestri A, Morlat P, Brunet-Cartier C, Sibiude J, Peretti D, Chambrin V, Chabrol A, Bui E, Simon-Toulza C, Marchand L, Paul C, Delmas S, Avettand-Fenoel V, Warszawski J, Monogest study group
Maintenance darunavir/ritonavir monotherapy to prevent perinatal HIV transmission, ANRS-MIE 168 MONOGEST study.
The Journal of Antimicrobial Chemotherapy 2023, 78, 1711-1722.

Duhant A, Kusinza B, Tantet C, Bisimwa B, Gare M, Masemo B, Alloui C, Ntakwinjan M, Mechai F, Le MP, Gerber A, Muhigirwa B, Peytavin G, Gordien E, Brichler S, Mukwege M, Le Gal F
HIV-1 infection in South Kivu (Democratic Republic of Congo): high genotypic resistance to antiretrovirals.
The Journal of Antimicrobial Chemotherapy 2023, 78, 1732-1739.

Contejean A, Maillard A, Canouï E, Kernéis S, Fantin B, Bouscary D, Parize P, Garcia-Vidal C, Charlier C
Advances in antibacterial treatment of adults with high-risk febrile neutropenia.
The Journal of Antimicrobial Chemotherapy 2023, 78, 2109-2120.

Aslan AT, Tabah A, Köylü B, Kalem AK, Aksoy F, Erol Ç, Karaali R, Tunay B, Guzeldağ S, Batirel A, Dindar EK, Akdoğan Ö, Bilir Y, Ersöz G, Öztürk B, Selçuk M, Yilmaz M, Akyol A, Akbaş T, Sungurtekin H, Timuroğlu A, Gürbüz Y, Çolak O, Bayindir Y, Eroğlu A, Ferlicolak L, Çeşme U, Dağ O, Buetti N, Barbier F, Ruckly S, Staiquly Q, Timsit JF, Akova M
Epidemiology and risk factors of 28-day mortality of hospital-acquired bloodstream infection in Turkish intensive care units: a prospective observational cohort study.
The Journal of Antimicrobial Chemotherapy 2023, 78, 1757-1768.

Kakooza F, Golparian D, Matoga M, Maseko V, Lamorde M, Krysiak R, Manabe YC, Chen JS, Kularatne R, Jacobsson S, Godreuil S, Hoffman I, Bercot B, Wi T, Unemo M
Genomic surveillance and antimicrobial resistance determinants in Neisseria gonorrhoeae isolates from Uganda, Malawi and South Africa, 2015-20..
The Journal of antimicrobial chemotherapy 2023, dkad193.

Tran A, Zureik M, Sibiude J, Drouin J, Miranda S, Weill A, Dray-Spira R, Duval X, Tubiana S
Prevalence and associated factors of antibiotic exposure during pregnancy in a large French population-based study during the 2010-19 period.
The Journal of Antimicrobial Chemotherapy 2023, 78, 2535-2543.

Goutelle S, Jullien V, Bru JP, Cattoir V, Gauzit R, Lesprit P, Lina G, Schramm F, Canoui E, Lepeule R
Defining standard and high dosages for β-lactam agents administered by intermittent, prolonged or continuous infusion: a PK/PD simulation study.
The Journal of Antimicrobial Chemotherapy 2023, dkad300.

Mazouz F, Bertine M, Coppée R, Storto A, Katlama C, Landman R, Cabié A, Peytavin G, Raffi F, Yazdanpanah Y, Descamps D, Joly V, Ghosn J, Charpentier C, LAMIDOL Study Group
Proportion of APOBEC3-induced defective HIV DNA after 1 year of dolutegravir + lamivudine simplification in the ANRS 167 LAMIDOL trial.
The Journal of Antimicrobial Chemotherapy 2023, dkad344.

Dinh A, Duran C, Singh S, Tesmoingt C, Bouabdallah L, Hamon A, Antignac M, Ourghanlian C, Loustalot MC, Pain JB, Wyplosz B, Junot H, Bleibtreu A, Michelon H
Real-life temocillin use in Greater Paris area, effectiveness and risk factors for failure in infections caused by ESBL-producing Enterobacterales: a multicentre retrospective study..
JAC-antimicrobial resistance 2023, 5, dlac132.

Lignieres G, Rybak A, Levy C, Birgy A, Bechet S, Bonacorsi S, Cohen R, Madhi F
Meningitis caused by extended-spectrum β-lactamase-producing Escherichia coli in infants in France: a case series.
JAC-antimicrobial resistance 2023, 5, dlad042.

Rondinaud E, Clermont O, Petitjean M, Ruppé E, Esposito-Farèse M, Nazimoudine A, VOYAG-R Study Group, Coignard B, Matheron S, Andremont A, Denamur E, Armand-Lefevre L
Acquisition of Enterobacterales carrying the colistin resistance gene mcr following travel to the tropics.
Journal of Travel Medicine 2023, 30, taac141.

Gschwind R, Ugarcina Perovic S, Weiss M, Petitjean M, Lao J, Coelho LP, Ruppé E
ResFinderFG v2.0: a database of antibiotic resistance genes obtained by functional metagenomics.
Nucleic Acids Research 2023, 51, W493-W500.

Lassoued Y, Assad Z, Ouldali N, Caseris M, Mariani P, Birgy A, Bonacorsi S, Bidet P, Faye A
Unexpected Increase in Invasive Group A Streptococcal Infections in Children After Respiratory Viruses Outbreak in France: A 15-Year Time-Series Analysis.
Open Forum Infectious Diseases 2023, 10, ofad188.

de Malliard I, Houist AL, Peytavin G, L'Yavanc T, Bouvier M, Cappy P, Lelièvre JD, Feredj E, Vindrios W, Gallien S, Melica G
Gynoid Fat Distribution and Adipocyte Trapping May Explain Virological Failure With Intramuscular Long-Acting Cabotegravir and Rilpivirine.
Open Forum Infectious Diseases 2023, 10, ofad217.

Gaborit B, Vanhove B, Lacombe K, Guimard T, Hocqueloux L, Perrier L, Dubee V, Ferre V, Bressollette C, Josien R, Thuaut AL, Vibet MA, Jobert A, Dailly E, Ader F, Brouard S, Duvaux O, Raffi F, POLYCOR study group
Effect of Swine Glyco-humanized Polyclonal Neutralizing Antibody on Survival and Respiratory Failure in Patients Hospitalized With Severe COVID-19: A Randomized, Placebo-Controlled Trial.
Open Forum Infectious Diseases 2023, 10, ofad525.

Tin Y, Castry M, Bowers-Sword R, Shantharam S, Aldridge A, Zarkin GA, Starbird L, Linas BP, Barocas JA, Morgan JR
Establishing a Protocol for Determining the Costs of an Integrated Set of Evidence-based Practices Aimed at Reducing Opioid Overdose Deaths.
Journal of Addiction Medicine 2023

Galerneau LM, Bailly S, Terzi N, Ruckly S, Garrouste-Orgeas M, Cohen Y, Hong Tuan Ha V, Gainnier M, Siami S, Dupuis C, Darmon M, Forel JM, Rigault G, Adrie C, Goldgran-Toledano D, Laurent V, de Montmollin E, Argaud L, Reignier J, Pepin JL, Timsit JF, OUTCOMEREA Network
Management of Acute Exacerbations of Chronic Obstructive Pulmonary Disease in the ICU: An Observational Study From the OUTCOMEREA Database, 1997-2018.
Critical Care Medicine 2023, 51, 753-764.

Vacheron CH, Friggeri A, Gerbaud-Coulas C, Dagonneau T, Timsit JF, Allaouchiche B, Wallet F, Bohe J, Piriou V, Maucort-Boulch D, Fauvernier M
Improved 30-Day Survival Estimation in ICU Patients: A Comparative Analysis of Different Approaches With Real-World Data.
Critical Care Medicine 2023

Magréault S, Charbit J, Berkane N, Jaureguy F, Carbonnelle E, Cosson E, Jullien V, Bihan H
Usefulness of Therapeutic Drug Monitoring to Manage Clindamycin-Rifampicin Interaction in a Patient with Diabetic Foot Osteomyelitis.
Therapeutic Drug Monitoring 2023, 45, 703-706.

Cohen R, Varon E, Bidet P, Cohen JF, Béchet S, Couloigner V, Michot AS, Guiheneuf C, Bonacorsi S, Levy C
Diagnostic Accuracy of Group A Streptococcus Rapid Antigen Detection Test on Middle Ear Fluid in Children With Acute Otitis Media With Spontaneous Perforation: A Prospective Multicenter Evaluation.
The Pediatric Infectious Disease Journal 2023, 42, 816-818.

Roughley M, Bertrand J, Reeves S
The Yale University Open Data Access Project: A Resource for Research in Psychopharmacology.
Journal of Clinical Psychopharmacology 2023, 43, 479-481.

Sonneville R, Dangayach NS, Newcombe V
Neurological complications of critically ill COVID-19 patients.
Current Opinion in Critical Care 2023, 29, 61-67.

Thy M, de Montmollin E, Bouadma L, Timsit JF, Sonneville R
Severe meningoencephalitis: epidemiology and outcomes.
Current Opinion in Critical Care 2023, 29, 415-422.

Tubiana S, Epelboin L, Casalino E, Naccache JM, Feydy A, Khalil A, Hausfater P, Duval X, Claessens YE, ESCAPED study group
Effect of diagnosis level of certainty on adherence to antibiotics' guidelines in ED patients with pneumonia: a post-hoc analysis of an interventional trial.
European Journal of Emergency Medicine: Official Journal of the European Society for Emergency Medicine 2023, 30, 102-109.

Cancella de Abreu M, Peyrony O, Hermand C, Bompard R, Bouzid D, Eyer X
Time to result advantage of point-of-care SARS-CoV-2 PCR testing to confirm COVID-19 in emergency department: a retrospective multicenter study.
European Journal of Emergency Medicine: Official Journal of the European Society for Emergency Medicine 2023, 30, 132-134.

Abensur Vuillaume L, Gennai S, Casalino E, Tazarourte K, Bilbault P
An emergency department organizational assessment questionnaire: a Delphi study to create standardized comparators for emergency department directors.
European Journal of Emergency Medicine: Official Journal of the European Society for Emergency Medicine 2023, 30, 209-210.

de Villartay JP, Pannier E, Sibiude J, Frange P, Tubiana R, Blanche S
Brief Report: T-Cell Receptor α Repertoire Diversity at Birth After in utero Exposure to HIV Integrase Strand-Transfer Inhibitors.
Journal of Acquired Immune Deficiency Syndromes (1999) 2023, 92, 260-262.

Antoine M, Rubenstein E, Lascoux-Combe C, Chawki S, Zeggagh J, Pintado C, Tateo M, Ponscarme D, Ferre VM, Descamps D, Molina JM
Clinical Description of Sixty-Six Cases of Monkeypox Virus (MKPV) Infection Among Men Who Have Sex With Men (MSM) in an HIV/PrEP French Clinic.
Journal of Acquired Immune Deficiency Syndromes (1999) 2023, 92, e11-e14.

Barbier F, Woerther PL, Timsit JF
Rapid diagnostics for skin and soft tissue infections: the current landscape and future potential.
Current Opinion in Infectious Diseases 2023, 36, 57-66.

Do Rego H, Timsit JF
Management strategies for severe Pseudomonas aeruginosa infections.
Current Opinion in Infectious Diseases 2023, 36, 585-595.

Ghazali DA, Choquet C, Bouzid D, Peyrony O, Fontaine JP, Sonja C, Javaud N, Plaisance P, Revue E, Chauvin A, Casalino E
The Response of Emergency Departments (EDs) to the COVID-19 Pandemic: The Experience of 5 EDs in a Paris-Based Academic Hospital Trust.
Quality Management in Health Care 2023, 32, 46-52.

Georjon H, Tesson F, Shomar H, Bernheim A
Genomic characterization of the antiviral arsenal of Actinobacteria.
Microbiology (Reading, England) 2023, 169, 001374.

Tubiana S, Sibiude J, Herlemont P, Drouin J, Picone O, Duval X, Weill A, Zureik M, Dray-Spira R
Trends in anti-infective use during pregnancy in France between 2010 and 2019: a nationwide population-based study.
British Journal of Clinical Pharmacology 2023, 89, 1629-1639.

Terzić V, Levoyer L, Figarella M, Bigagli E, Mercier N, De Gastines L, Gibowski S, Trøseid M, Demotes J, Olsen IC, Hites M, Ader F, Lopez JRA, Mentré F, Espérou H, Costagliola D, Røttingen JA, Poissy J, Rozé JC, Warris A, O'Leary J, Fernandes RM, Assoumou L, Hankard R, Turner MA, Yazdanpanah Y, Diallo A, EU-Response safety group, c4c safety group
Implementation of a centralized pharmacovigilance system in academic pan-European clinical trials: Experience from EU-Response and conect4children consortia.
British Journal of Clinical Pharmacology 2023, 89, 1318-1328.

Roughley M, Mena C, Howard R, Reeves S, Bertrand J
Guiding safer risperidone prescribing in Alzheimer's disease with therapeutic drug monitoring.
British Journal of Clinical Pharmacology 2023, 89, 2316-2321.

Lemaitre F, Lagoutte-Renosi J, Gagnieu MC, Parant F, Venisse N, Grégoire M, Bouchet S, Garraffo R, Lê MP, Muret P, Comets E, Solas C, Peytavin G, ANRS-MIE-BIRIDER Study group on behalf of the Clinical Pharmacology Group of ANRS-MIE AC43
Therapeutic drug monitoring and virological response at week 48 in a cohort of HIV-1-infected patients switching to dolutegravir/rilpivirine dual maintenance therapy (ANRS-MIE-BIRIDER study).
British Journal of Clinical Pharmacology 2023

Kerioui M, Beaulieu M, Desmée S, Bertrand J, Mercier F, Jin JY, Bruno R, Guedj J
Nonlinear multilevel joint model for individual lesion kinetics and survival to characterize intra-individual heterogeneity in patients with advanced cancer.
Biometrics 2023

Rekik S, Pluart DL, Ferré V, Charpentier C, Laurain A, Ghosn J, Abramowitz L
Anogenital symptoms and lesions in a series of 20 patients infected with monkeypox virus.
Colorectal Disease: The Official Journal of the Association of Coloproctology of Great Britain and Ireland 2023, 25, 1002-1005.

Wortel MT, Agashe D, Bailey SF, Bank C, Bisschop K, Blankers T, Cairns J, Colizzi ES, Cusseddu D, Desai MM, van Dijk B, Egas M, Ellers J, Groot AT, Heckel DG, Johnson ML, Kraaijeveld K, Krug J, Laan L, Lässig M, Lind PA, Meijer J, Noble LM, Okasha S, Rainey PB, Rozen DE, Shitut S, Tans SJ, Tenaillon O, Teotónio H, de Visser JAGM, Visser ME, Vroomans RMA, Werner GDA, Wertheim B, Pennings PS
Towards evolutionary predictions: Current promises and challenges.
Evolutionary Applications 2023, 16, 3-21.

Liegeon G, Ghosn J
Long-acting injectable cabotegravir for PrEP: A game-changer in HIV prevention?.
HIV medicine 2023, 24, 653-663.

Hocqueloux L, Menard A, Arvieux C, Joly V, Becker A, Chéret A, Duvivier C, Cabié A, Delpierre C, Allavena C, Dat'AIDS Study Group
Weight gain following the single substitution of tenofovir disoproxil fumarate by tenofovir alafenamide in HIV-infected people from the French Dat'AIDS cohort: A propensity score-matched analysis.
HIV medicine 2023, 24, 925-932.

Protiere C, Sagaon-Teyssier L, Donadille C, Sow A, Gaubert G, Girard G, Mora M, Assoumou L, Beniguel L, Michels D, Ghosn J, Costagliola D, Rojas Castro D, Molina JM, Spire B, ANRS PREVENIR Study-Group
Perception of PrEP-related stigma in PrEP users: Results from the ANRS-PREVENIR cohort.
HIV medicine 2023, 24, 938-945.

Moghadam P, Herms F, Baroudjian B, Tetu P, Delyon J, Jouenne F, Boisson M, Louveau B, Mourah S, Brunet-Possenti F, Duverger L, Gounant V, Lebbé C, Basset-Seguin N
Eruptive squamous cell carcinomas following an acute skin inflammatory disease: A series of four cases.
Journal of the European Academy of Dermatology and Venereology: JEADV 2023, 37, e119-e121.

Bertin C, Beaumont AL, Merlant M, Mailhe M, Le Pluart D, Deconinck L, Thy M, Cortier M, Garé M, Dollat M, Rahi M, Joly V, Lariven S, Rioux C, Truong A, Deschamps L, Ferré VM, Charpentier C, Lescure FX, Bouscarat F, Descamps V, Yazdanpanah Y, Peiffer-Smadja N
Erythematous maculopapular rash in monkeypox virus infection: A retrospective case series of 30 patients.
Journal of the European Academy of Dermatology and Venereology: JEADV 2023, 37, e638-e641.

Khelef K, Maubec E, Jeudy G, Bonniaud B, Pham-Ledard A, Herms F, Aubin F, Beneton N, Dinulescu M, Jannic A, Duval-Modeste A, Archier E, Berthin C, Grange F, Arnault J, Heidelberger V, Moncourier M, Mansard S, Brunet-Possenti F, Triller R, Pracht M, Dumas M, Lauche O, Mortier L, Bedane C, Dalac Rat S
Duration of treatment with cemiplimab in advanced cutaneous squamous cell carcinoma in complete response: Real-life study.
Journal of the European Academy of Dermatology and Venereology: JEADV 2023

Mengeot L, Jachiet M, Bourrat E, Mahé A, Cambau E, Bernard E, Pasqualini C, Chamouine A, Truong J, Dumaine C, Bertolotti A, Franco J
Effective management of severe chronic erythema nodosum leprosum in adolescent patient using ustekinumab and apremilast: A case report.
Journal of the European Academy of Dermatology and Venereology: JEADV 2023

Geoffroy PA, Stern E, Maruani J, Cornic R, Bazin B, Clerici E, Ambar Akkaoui M, Lopez R, Frija Masson J, d'Ortho MP, Lejoyeux M, Micoulaud Franchi JA, Couffignal C
The nightmare severity index (NSI): A short new multidimensional tool for assessing nightmares.
Journal of Sleep Research 2023, e14065.

Allavena C, Bastides F, Moroy A, Occhipinti S, Durand F, Barriere G, Micoulaud-Franchi JA, Ghosn J
The screening and management of sleep disturbances in people living with HIV: Delphi consensus.
Journal of Sleep Research 2023, e14070.

Ghazali DA, Ilha-Schuelter P, Oriot D
Performing complex interdisciplinary procedures: Never on the patient the first time!.
Medical Education 2023

Canouï E, Rossi G, Nguyen Y, Lafont E, Rossi B, Roux O, Dokmak S, Bert F, Leflon-Guibout V, Fantin B, Lefort A
Analysis of 15 cases from a monocentric cohort of 307 liver abscesses.
Mycoses 2023, 66, 984-991.

Bonello K, Figoni H, Blanchard E, Vignier N, Avenin G, Melchior M, Cadwallader JS, Chastang J, Ibanez G
Prevalence of smoking during pregnancy and associated social inequalities in developed countries over the 1995-2020 period: A systematic review.
Paediatric and Perinatal Epidemiology 2023

Melenotte C, Aimanianda V, Slavin M, Aguado JM, Armstrong-James D, Chen YC, Husain S, Van Delden C, Saliba F, Lefort A, Botterel F, Lortholary O
Invasive aspergillosis in liver transplant recipients.
Transplant Infectious Disease: An Official Journal of the Transplantation Society 2023, e14049.

Lee D, Le Pen J, Yatim A, Dong B, Aquino Y, Ogishi M, Pescarmona R, Talouarn E, Rinchai D, Zhang P, Perret M, Liu Z, Jordan I, Elmas Bozdemir S, Bayhan GI, Beaufils C, Bizien L, Bisiaux A, Lei W, Hasan M, Chen J, Gaughan C, Asthana A, Libri V, Luna JM, Jaffré F, Hoffmann HH, Michailidis E, Moreews M, Seeleuthner Y, Bilguvar K, Mane S, Flores C, Zhang Y, Arias AA, Bailey R, Schlüter A, Milisavljevic B, Bigio B, Le Voyer T, Materna M, Gervais A, Moncada-Velez M, Pala F, Lazarov T, Levy R, Neehus AL, Rosain J, Peel J, Chan YH, Morin MP, Pino-Ramirez RM, Belkaya S, Lorenzo L, Anton J, Delafontaine S, Toubiana J, Bajolle F, Fumadó V, DeDiego ML, Fidouh N, Rozenberg F, Pérez-Tur J, Chen S, Evans T, Geissmann F, Lebon P, Weiss SR, Bonnet D, Duval X, CoV-Contact Cohort§, COVID Human Genetic Effort¶, Pan-Hammarström Q, Planas AM, Meyts I, Haerynck F, Pujol A, Sancho-Shimizu V, Dalgard CL, Bustamante J, Puel A, Boisson-Dupuis S, Boisson B, Maniatis T, Zhang Q, Bastard P, Notarangelo L, Béziat V, Perez de Diego R, Rodriguez-Gallego C, Su HC, Lifton RP, Jouanguy E, Cobat A, Alsina L, Keles S, Haddad E, Abel L, Belot A, Quintana-Murci L, Rice CM, Silverman RH, Zhang SY, Casanova JL
Inborn errors of OAS-RNase L in SARS-CoV-2-related multisystem inflammatory syndrome in children.
Science (New York, N.Y.) 2023, 379, eabo3627.

Bastard P, Vazquez SE, Liu J, Laurie MT, Wang CY, Gervais A, Le Voyer T, Bizien L, Zamecnik C, Philippot Q, Rosain J, Catherinot E, Willmore A, Mitchell AM, Bair R, Garçon P, Kenney H, Fekkar A, Salagianni M, Poulakou G, Siouti E, Sahanic S, Tancevski I, Weiss G, Nagl L, Manry J, Duvlis S, Arroyo-Sánchez D, Paz Artal E, Rubio L, Perani C, Bezzi M, Sottini A, Quaresima V, Roussel L, Vinh DC, Reyes LF, Garzaro M, Hatipoglu N, Boutboul D, Tandjaoui-Lambiotte Y, Borghesi A, Aliberti A, Cassaniti I, Venet F, Monneret G, Halwani R, Sharif-Askari NS, Danielson J, Burrel S, Morbieu C, Stepanovskyy Y, Bondarenko A, Volokha A, Boyarchuk O, Gagro A, Neuville M, Neven B, Keles S, Hernu R, Bal A, Novelli A, Novelli G, Saker K, Ailioaie O, Antolí A, Jeziorski E, Rocamora-Blanch G, Teixeira C, Delaunay C, Lhuillier M, Le Turnier P, Zhang Y, Mahevas M, Pan-Hammarström Q, Abolhassani H, Bompoil T, Dorgham K, COVID HGE Consortium, French COVID Study Group, COMET Consortium, Gorochov G, Laouenan C, Rodríguez-Gallego C, Ng LFP, Renia L, Pujol A, Belot A, Raffi F, Allende LM, Martinez-Picado J, Ozcelik T, Imberti L, Notarangelo LD, Troya J, Solanich X, Zhang SY, Puel A, Wilson MR, Trouillet-Assant S, Abel L, Jouanguy E, Ye CJ, Cobat A, Thompson LM, Andreakos E, Zhang Q, Anderson MS, Casanova JL, DeRisi JL
Vaccine breakthrough hypoxemic COVID-19 pneumonia in patients with auto-Abs neutralizing type I IFNs.
Science Immunology 2023, 8, eabp8966.

Le Turnier P, Tattevin P, Varon E, Duval X
Empirical Treatment in Acute Bacterial Meningitis: a Plea for High Doses of Cefotaxime or Ceftriaxone.
Antimicrobial Agents and Chemotherapy 2023, 67, e0001223.

Allain M, Mahérault AC, Gachet B, Martinez C, Condamine B, Magnan M, Kempf I, Denamur E, Landraud L
Dissemination of IncI plasmid encoding bla CTX-M-1 is not hampered by its fitness cost in the pig's gut.
Antimicrobial Agents and Chemotherapy 2023, 67, e0011123.

Presente S, Bonnal C, Normand AC, Gaudonnet Y, Fekkar A, Timsit JF, Kernéis S
Hospital Clonal Outbreak of Fluconazole-Resistant Candida parapsilosis Harboring the Y132F ERG11p Substitution in a French Intensive Care Unit.
Antimicrobial Agents and Chemotherapy 2023, 67, e0113022.

Facchin A, Benyoub N, Elie V, Magreault S, Jacqz-Aigrain E
Limited Sampling Strategies to Predict Ganciclovir Exposure after Valganciclovir Administration and to Reduce Monitoring Constraints in Renal Transplant Children.
Antimicrobial Agents and Chemotherapy 2023, 67, e0159722.

Bertrand J, Barrail-Tran A, Fayette L, Savic R, Goujard C, Teicher E, Barau C, Pruvost A, Taburet AM, Mentré F, Verstuyft C
Pharmacokinetic Model of Tenofovir and Emtricitabine and Their Intracellular Metabolites in Patients in the ANRS 134-COPHAR 3 Trial Using Dose Records.
Antimicrobial Agents and Chemotherapy 2023, 67, e0233918.

Guiraud V, Bocobza J, Desmonet M, Damond F, Plantier JC, Moreau G, Wirden M, Stefic K, Barin F, Gautheret-Dejean A
Are Confirmatory Assays Reliable for HIV-1/HIV-2 Infection Differentiation? A Multicenter Study.
Journal of Clinical Microbiology 2023, 61, e0061923.

Khan MS, Kim E, Le Hingrat Q, Kleinman A, Ferrari A, Sammartino JC, Percivalle E, Xu C, Huang S, Kenniston TW, Cassaniti I, Baldanti F, Pandrea I, Gambotto A, Apetrei C
Tetravalent SARS-CoV-2 S1 subunit protein vaccination elicits robust humoral and cellular immune responses in SIV-infected rhesus macaque controllers.
mBio 2023, e0207023.

Laurentie J, Loux V, Hennequet-Antier C, Chambellon E, Deschamps J, Trotereau A, Furlan S, Darrigo C, Kempf F, Lao J, Milhes M, Roques C, Quinquis B, Vandecasteele C, Boyer R, Bouchez O, Repoila F, Le Guennec J, Chiapello H, Briandet R, Helloin E, Schouler C, Kempf I, Serror P
Comparative Genome Analysis of Enterococcus cecorum Reveals Intercontinental Spread of a Lineage of Clinical Poultry Isolates.
mSphere 2023, 8, e0049522.

Hauser S, Lazarevic V, Tournoud M, Ruppé E, Santiago Allexant E, Guigon G, Schicklin S, Lanet V, Girard M, Mirande C, Gervasi G, Schrenzel J
A metagenomics method for the quantitative detection of bacterial pathogens causing hospital-associated and ventilator-associated pneumonia.
Microbiology Spectrum 2023, e0129423.

Caméléna F, Péan de Ponfilly G, Pailhoriès H, Bonzon L, Alanio A, Poncin T, Lafaurie M, Dépret F, Cambau E, Godreuil S, Chenouard R, Le Monnier A, Jacquier H, Berçot B
Multicenter Evaluation of the FilmArray Blood Culture Identification 2 Panel for Pathogen Detection in Bloodstream Infections.
Microbiology Spectrum 2023, 11, e0254722.

Bhattacharjee A, Sands K, Mitra S, Basu R, Saha B, Clermont O, Dutta S, Basu S
A Decade-Long Evaluation of Neonatal Septicaemic Escherichia coli: Clonal Lineages, Genomes, and New Delhi Metallo-Beta-Lactamase Variants..
Microbiology spectrum 2023, e0521522.

Sikias P, Biran V, Foix-L'Hélias L, Plainvert C, Boileau P, Bonacorsi S, EOS study group
Early-onset neonatal sepsis in the Paris area: a population-based surveillance study from 2019 to 2021.
Archives of Disease in Childhood. Fetal and Neonatal Edition 2023, 108, 114-120.

Lacombe K, Hueso T, Porcher R, Mekinian A, Chiarabini T, Georgin-Lavialle S, Ader F, Saison J, Martin-Blondel G, De Castro N, Bonnet F, Cazanave C, Francois A, Morel P, Hermine O, Pourcher V, Michel M, Lescure X, Soussi N, Brun P, Pommeret F, Sellier P, Rousset S, Piroth L, Michot JM, Baron G, de Lamballerie X, Mariette X, Tharaux PL, Resche-Rigon M, Ravaud P, Simon T, Tiberghien P
Use of covid-19 convalescent plasma to treat patients admitted to hospital for covid-19 with or without underlying immunodeficiency: open label, randomised clinical trial.
BMJ medicine 2023, 2, e000427.

Foucrier A, Roquilly A, Bachelet D, Martin-Loeches I, Bougle A, Timsit JF, Montravers P, Zahar JR, Eloy P, Weiss E, ASPIC study group
Antimicrobial Stewardship for Ventilator Associated Pneumonia in Intensive Care (the ASPIC trial): study protocol for a randomised controlled trial.
BMJ open 2023, 13, e065293.

Jaquet P, Couffignal C, Tardivon C, Godard V, Bellot R, Assouline B, Benghanem S, Da Silva D, Decavèle M, Dessajan J, Hermann B, Rambaud T, Voiriot G, Sonneville R, PODIUM Study Group
PupillOmetry for preDIction of DeliriUM in ICU (PODIUM): protocol for a prospective multicentre cohort study.
BMJ open 2023, 13, e072095.

Bouzid D, Tran-Dinh A, Lortat-Jacob B, Atchade E, Jean-Baptiste S, Tashk P, Snauwaert A, Zappella N, Augustin P, Pellenc Q, Castier Y, Ribeiro L, Gaudemer A, Khalil A, Montravers P, Tanaka S, Bichat stab wounds injury study group
Ultrasonography in thoracic and abdominal stab wound injury: results from the FETTHA study.
Emergency medicine journal: EMJ 2023, emermed-2023-213078.

Pereyre S, Laurier-Nadalié C, Le Roy C, Guiraud J, Dolzy A, Hénin N, Gardette M, Bébéar C
Prevalence of macrolide and fluoroquinolone resistance-associated mutations in Mycoplasma genitalium in metropolitan and overseas France..
Sexually transmitted infections 2023, 99, 254-260.

Sonneville R, Mazighi M, Collet M, Gayat E, Degos V, Duranteau J, Grégoire C, Sharshar T, Naim G, Cortier D, Jost PH, Foucrier A, Bagate F, de Montmollin E, Papin G, Magalhaes E, Guidet B, Ben Hadj Salem O, Benghanem S, le Guennec L, Delpierre E, Legriel S, Megarbane B, Toumert K, Tran M, Geri G, Monchi M, Bodiguel E, Mariotte E, Demoule A, Zarka J, Diehl JL, Roux D, Barré E, Tanaka S, Osman D, Pasquier P, Lamara F, Crassard I, Boursin P, Ruckly S, Staiquly Q, Timsit JF, Woimant F, SPICE Investigators
One-Year Outcomes in Patients With Acute Stroke Requiring Mechanical Ventilation.
Stroke 2023, 54, 2328-2337.

Chommeloux J, Valentin S, Winiszewski H, Adda M, Pineton de Chambrun M, Moyon Q, Mathian A, Capellier G, Guervilly C, Levy B, Jaquet P, Sonneville R, Voiriot G, Demoule A, Boussouar S, Painvin B, Lebreton G, Combes A, Schmidt M
One-Year Mental and Physical Health Assessment in Survivors after Extracorporeal Membrane Oxygenation for COVID-19-related Acute Respiratory Distress Syndrome.
American Journal of Respiratory and Critical Care Medicine 2023, 207, 150-159.

Guintivano J, Byrne EM, Kiewa J, Yao S, Bauer AE, Aberg KA, Adams MJ, Campbell A, Campbell ML, Choi KW, Corfield EC, Havdahl A, Hucks D, Koen N, Lu Y, Mægbæk ML, Mullaert J, Peterson RE, Raffield LM, Sallis HM, Sealock JM, Walker A, Watson HJ, Xiong Y, Yang JMK, Anney RJL, Gordon-Smith K, Hubbard L, Jones LA, Mihaescu R, Nyegaard M, Pardiñas AF, Perry A, Saquib N, Shadyab AH, Viktorin A, Andreassen OA, Bigdeli TB, Davis LK, Dennis CL, Di Florio A, Dubertret C, Feng YCA, Frey BN, Grigoriadis S, Gloaguen E, Jones I, Kennedy JL, Krohn H, Kunovac Kallak T, Li Y, Martin NG, McIntosh AM, Milgrom J, Munk-Olsen T, Oberlander T, Olsen CM, Ramoz N, Reichborn-Kjennerud T, Robertson Blackmore E, Rubinow D, Skalkidou A, Smoller JW, Stein DJ, Stowe ZN, Taylor V, Tebeka S, Tesli M, Van Lieshout RJ, van den Oord EJCG, Vigod SN, Werge T, Westlye LT, Whiteman DC, Zar HJ, Major Depressive Disorder Working Group of the Psychiatric Genomics Consortium, Wray N, Meltzer-Brody S, Sullivan P
Meta-Analyses of Genome-Wide Association Studies for Postpartum Depression.
The American Journal of Psychiatry 2023, 180, 884-895.

Penaud V, Duburcq T, Bureau C, Salmon Gandonnière C, Arrestier R, Henri S, Dres M, Jacquier S, Prost ND, Giraud R, Ricard JD, Roux D, Uhel F, Legouis D, Verney C
Kidney Increase Natriuresis but Not Glomerular Filtration Under Veno-venous ECMO, a Retrospective Study.
Journal of Intensive Care Medicine 2023, 8850666231195755.

Nicolas A, Leroy S, Mouthon L, Uzunhan Y, Cottin V, Mekinian A, Queyrel V, Hachulla E, Gachet B, Launay D, Martis N
Systemic sclerosis associated interstitial lung disease: a survey of current practices in France..
Therapeutic advances in musculoskeletal disease 2023, 15, 1759720X231159712.

Lenglart L, Ouldali N, Honeyford K, Bognar Z, Bressan S, Buonsenso D, Da Dalt L, De T, Farrugia R, Maconochie IK, Moll HA, Oostenbrink R, Parri N, Roland D, Rose K, Akyüz Özkan E, Angoulvant F, Aupiais C, Barber C, Barrett M, Basmaci R, Castanhinha S, Chiaretti A, Durnin S, Fitzpatrick P, Fodor L, Gomez B, Greber-Platzer S, Guedj R, Hey F, Jankauskaite L, Kohlfuerst D, Mascarenhas I, Musolino AM, Pučuka Z, Reis S, Rybak A, Salamon P, Schaffert M, Shahar-Nissan K, Supino MC, Teksam O, Turan C, Velasco R, Nijman RG, Titomanlio L, EPISODES Study Group
Respective roles of non-pharmaceutical interventions in bronchiolitis outbreaks: an interrupted time-series analysis based on a multinational surveillance system.
The European Respiratory Journal 2023, 61, 2201172.

Svendsen NA, Radchuk V, Morel-Journel T, Thuillier V, Schtickzelle N
Complexity vs linearity: relations between functional traits in a heterotrophic protist.
BMC ecology and evolution 2023, 23, 1.

Gras J, Le Flécher A, Dupont A, Vérine J, Amara A, Delaugerre C, Molina JM, Peraldi MN
Characteristics, risk factors and outcome of BKV nephropathy in kidney transplant recipients: a case-control study.
BMC infectious diseases 2023, 23, 74.

Sadio AJ, Ferré VM, Konu RY, Dagnra AC, Descamps D, Ekouevi DK, Charpentier C
High SARS-CoV-2 seroprevalence among street adolescents in Lomé, Togo, 2021.
BMC infectious diseases 2023, 23, 200.

Benadji A, Debroucker T, Martin-Blondel G, Argaud L, Vitrat V, Biron C, Wolff M, Hoen B, Duval X, Tubiana S
Cerebrovascular complications in patients with community-acquired bacterial meningitis: occurrence and associated factors in the COMBAT multicenter prospective cohort.
BMC infectious diseases 2023, 23, 376.

Vazouras K, Jackson C, Folgori L, Anastasiou-Katsiardani A, Hsia Y, Basmaci R
Quality indicators for appropriate antibiotic prescribing in urinary tract infections in children.
BMC infectious diseases 2023, 23, 400.

Sawras V, Deuffic-Burban S, Préau M, Spire B, Yazdanpanah Y, Champenois K
Assessing complex interventions: a systematic review of outcomes used in randomised controlled trials on STI partner notification in high-income countries.
BMC public health 2023, 23, 1838.

Perrichot A, Vaittinada Ayar P, Taboulet P, Choquet C, Gay M, Casalino E, Steg PG, Curac S, Vaittinada Ayar P
Assessment of real-time electrocardiogram effects on interpretation quality by emergency physicians.
BMC medical education 2023, 23, 677.

Sette AL, François P, Lesprit P, Vitrat V, Rogeaux O, Breugnon E, Baldeyrou M, Mondain V, Issartel B, Kerneis S, Diamantis S, Poitrenaud D, Boussat B, Pavese P
Infectious disease hotlines to provide advice to general practitioners: a prospective study.
BMC health services research 2023, 23, 502.

Philippot Q, Bastard P, Puel A, Casanova JL, Cobat A, Laouénan C, Tardivon C, Crestani B, Borie R
No increased prevalence of autoantibodies neutralizing type I IFNs in idiopathic pulmonary fibrosis patients.
Respiratory Research 2023, 24, 87.

Yade MS, Dièye B, Coppée R, Mbaye A, Diallo MA, Diongue K, Bailly J, Mama A, Fall A, Thiaw AB, Ndiaye IM, Ndiaye T, Gaye A, Tine A, Diédhiou Y, Mbaye AM, Doderer-Lang C, Garba MN, Bei AK, Ménard D, Ndiaye D
Ex vivo RSA and pfkelch13 targeted-amplicon deep sequencing reveal parasites susceptibility to artemisinin in Senegal, 2017.
Malaria Journal 2023, 22, 167.

Pichon M, Cremniter J, Burucoa C
French national epidemiology of bacterial superinfections in ventilator-associated pneumonia in patients infected with COVID-19: the COVAP study..
Annals of clinical microbiology and antimicrobials 2023, 22, 50.

De Castro N, Brun A, Sellier P, Hamet G, Mechaï F, Garrait V, Chabrol A, Bouldouyre MA, Froguel E, Troisvallets D, Caraux-Paz P, Delaugerre C, Rozenbaum W, Molina JM
Safety and efficacy of switching to elvitegravir, cobicistat, emtricitabine, tenofovir disoproxil fumarate in treatment-experienced people with HIV: a multicenter cohort study.
AIDS research and therapy 2023, 20, 1.

Nuzzo A, Peoc'h K, Vaittinada Ayar P, Tran-Dinh A, Weiss E, Panis Y, Ronot M, Garzelli L, Eloy P, Ben Abdallah I, Castier Y, Corcos O
Improving clinical suspicion of acute mesenteric ischemia among patients with acute abdomen: a cross-sectional study from an intestinal stroke center.
World journal of emergency surgery: WJES 2023, 18, 37.

de Villiers de la Noue V, Théry G, Faroux L, Belkessa N, Rubin S, Mourvillier B, Goury A
Left atrial dissection after a supra-annular mitral valve replacement for endocarditis.
Journal of Cardiothoracic Surgery 2023, 18, 75.

Trøseid M, Arribas JR, Assoumou L, Holten AR, Poissy J, Terzić V, Mazzaferri F, Baño JR, Eustace J, Hites M, Joannidis M, Paiva JA, Reuter J, Püntmann I, Patrick-Brown TDJH, Westerheim E, Nezvalova-Henriksen K, Beniguel L, Dahl TB, Bouscambert M, Halanova M, Péterfi Z, Tsiodras S, Rezek M, Briel M, Ünal S, Schlegel M, Ader F, Lacombe K, Amdal CD, Rodrigues S, Tonby K, Gaudet A, Heggelund L, Mootien J, Johannessen A, Møller JH, Pollan BD, Tveita AA, Kildal AB, Richard JC, Dalgard O, Simensen VC, Baldé A, de Gastines L, Del Álamo M, Aydin B, Lund-Johansen F, Trabaud MA, Diallo A, Halvorsen B, Røttingen JA, Tacconelli E, Yazdanpanah Y, Olsen IC, Costagliola D, EU SolidAct study group
Efficacy and safety of baricitinib in hospitalized adults with severe or critical COVID-19 (Bari-SolidAct): a randomised, double-blind, placebo-controlled phase 3 trial.
Critical Care (London, England) 2023, 27, 9.

Moreno R, Rhodes A, Piquilloud L, Hernandez G, Takala J, Gershengorn HB, Tavares M, Coopersmith CM, Myatra SN, Singer M, Rezende E, Prescott HC, Soares M, Timsit JF, de Lange DW, Jung C, De Waele JJ, Martin GS, Summers C, Azoulay E, Fujii T, McLean AS, Vincent JL
The Sequential Organ Failure Assessment (SOFA) Score: has the time come for an update?.
Critical Care (London, England) 2023, 27, 15.

Sharshar T, Porcher R, Asfar P, Grimaldi L, Jabot J, Argaud L, Lebert C, Bollaert PE, Harlay ML, Chillet P, Maury E, Santoli F, Blanc P, Sonneville R, Vu DC, Rohaut B, Mazeraud A, Alvarez JC, Navarro V, Clair B, Outin H, Valse investigators and for the Groupe d’Explorations Neurologiques en Reanimation (GENER)
Valproic acid as adjuvant treatment for convulsive status epilepticus: a randomised clinical trial.
Critical Care (London, England) 2023, 27, 8.

Gaillet A, Azoulay E, de Montmollin E, Garrouste-Orgeas M, Cohen Y, Dupuis C, Schwebel C, Reignier J, Siami S, Argaud L, Adrie C, Mourvillier B, Ruckly S, Forel JM, Timsit JF
Outcomes in critically Ill HIV-infected patients between 1997 and 2020: analysis of the OUTCOMEREA multicenter cohort.
Critical Care (London, England) 2023, 27, 108.

Giabicani M, Le Terrier C, Poncet A, Guidet B, Rigaud JP, Quenot JP, Mamzer MF, Pugin J, Weiss E, Bourcier S
Limitation of life-sustaining therapies in critically ill patients with COVID-19: a descriptive epidemiological investigation from the COVID-ICU study..
Critical care (London, England) 2023, 27, 103.

Contou D, Béduneau G, Rabault C, Sonneville R, Marchalot A, Coudroy R, Roux D, Cour M, Massol J, Préau S, de Prost N, HOPEFUL Study Group
Skin biopsy in adult patients with meningococcal purpura fulminans: a multicenter retrospective cohort study.
Critical Care (London, England) 2023, 27, 166.

Walter T, Ricard JD
Extended prone positioning for intubated ARDS: a review..
Critical care (London, England) 2023, 27, 264.

Williams PG, Tabah A, Cotta MO, Sandaradura I, Kanji S, Scheetz MH, Imani S, Elhadi M, Luque-Pardos S, Schellack N, Sanches C, Timsit JF, Xie J, Farkas A, Wilks K, Roberts JA, National Coordinators on behalf of the European Society of Intensive Care Medicine (ESICM) and the European Society of Clinical Microbiology and Infectious Diseases (ESCMID) Study Group for Infections in Critically Ill Patients [ESGCIP]
International survey of antibiotic dosing and monitoring in adult intensive care units.
Critical Care (London, England) 2023, 27, 241.

Giacobbe DR, Dettori S, Di Pilato V, Asperges E, Ball L, Berti E, Blennow O, Bruzzone B, Calvet L, Capra Marzani F, Casabella A, Choudaly S, Dartevel A, De Pascale G, Di Meco G, Fallon M, Galerneau LM, Gallego M, Giacomini M, González Sáez A, Hänsel L, Icardi G, Koehler P, Lagrou K, Lahmer T, Lewis White P, Magnasco L, Marchese A, Marelli C, Marín-Arriaza M, Martin-Loeches I, Mekontso-Dessap A, Mikulska M, Mularoni A, Nordlander A, Poissy J, Russelli G, Signori A, Tascini C, Vaconsin LM, Vargas J, Vena A, Wauters J, Pelosi P, Timsit JF, Bassetti M, JIR-ICU investigators (collaborators), Critically Ill Patients Study Group of the European Society of Clinical Microbiology and Infectious Diseases (ESGCIP), and the Fungal Infection Study Group of the European Society of Clinical Microbiology and Infectious Diseases (EFISG)
Pneumocystis jirovecii pneumonia in intensive care units: a multicenter study by ESGCIP and EFISG.
Critical Care (London, England) 2023, 27, 323.

Galerneau LM, Bailly S, Terzi N, Ruckly S, Garrouste-Orgeas M, Oziel J, Hong Tuan Ha V, Gainnier M, Siami S, Dupuis C, Forel JM, Dartevel A, Dessajan J, Adrie C, Goldgran-Toledano D, Laurent V, Argaud L, Reignier J, Pepin JL, Darmon M, Timsit JF, OUTCOME R. E. A. network
Non-ventilator-associated ICU-acquired pneumonia (NV-ICU-AP) in patients with acute exacerbation of COPD: From the French OUTCOMEREA cohort.
Critical Care (London, England) 2023, 27, 359.

Sonneville R, Benghanem S, Jeantin L, de Montmollin E, Doman M, Gaudemer A, Thy M, Timsit JF
The spectrum of sepsis-associated encephalopathy: a clinical perspective.
Critical Care (London, England) 2023, 27, 386.

Matuozzo D, Talouarn E, Marchal A, Zhang P, Manry J, Seeleuthner Y, Zhang Y, Bolze A, Chaldebas M, Milisavljevic B, Gervais A, Bastard P, Asano T, Bizien L, Barzaghi F, Abolhassani H, Abou Tayoun A, Aiuti A, Alavi Darazam I, Allende LM, Alonso-Arias R, Arias AA, Aytekin G, Bergman P, Bondesan S, Bryceson YT, Bustos IG, Cabrera-Marante O, Carcel S, Carrera P, Casari G, Chaïbi K, Colobran R, Condino-Neto A, Covill LE, Delmonte OM, El Zein L, Flores C, Gregersen PK, Gut M, Haerynck F, Halwani R, Hancerli S, Hammarström L, Hatipoğlu N, Karbuz A, Keles S, Kyheng C, Leon-Lopez R, Franco JL, Mansouri D, Martinez-Picado J, Metin Akcan O, Migeotte I, Morange PE, Morelle G, Martin-Nalda A, Novelli G, Novelli A, Ozcelik T, Palabiyik F, Pan-Hammarström Q, de Diego RP, Planas-Serra L, Pleguezuelo DE, Prando C, Pujol A, Reyes LF, Rivière JG, Rodriguez-Gallego C, Rojas J, Rovere-Querini P, Schlüter A, Shahrooei M, Sobh A, Soler-Palacin P, Tandjaoui-Lambiotte Y, Tipu I, Tresoldi C, Troya J, van de Beek D, Zatz M, Zawadzki P, Al-Muhsen SZ, Alosaimi MF, Alsohime FM, Baris-Feldman H, Butte MJ, Constantinescu SN, Cooper MA, Dalgard CL, Fellay J, Heath JR, Lau YL, Lifton RP, Maniatis T, Mogensen TH, von Bernuth H, Lermine A, Vidaud M, Boland A, Deleuze JF, Nussbaum R, Kahn-Kirby A, Mentre F, Tubiana S, Gorochov G, Tubach F, Hausfater P, COVID Human Genetic Effort, COVIDeF Study Group, French COVID Cohort Study Group, CoV-Contact Cohort, COVID-STORM Clinicians, COVID Clinicians, Orchestra Working Group, Amsterdam UMC Covid-19 Biobank, NIAID-USUHS COVID Study Group, Meyts I, Zhang SY, Puel A, Notarangelo LD, Boisson-Dupuis S, Su HC, Boisson B, Jouanguy E, Casanova JL, Zhang Q, Abel L, Cobat A
Rare predicted loss-of-function variants of type I IFN immunity genes are associated with life-threatening COVID-19.
Genome Medicine 2023, 15, 22.

Martin-Loeches I, Shorr AF, Wunderink RG, Kollef MH, Timsit JF, Yu B, Huntington JA, Jensen E, Bruno CJ
Outcomes in participants with ventilated nosocomial pneumonia and organ failure treated with ceftolozane/tazobactam versus meropenem: a subset analysis of the phase 3, randomized, controlled ASPECT-NP trial.
Annals of Intensive Care 2023, 13, 8.

Iachkine J, Buetti N, de Grooth HJ, Briant AR, Mimoz O, Mégarbane B, Mira JP, Valette X, Daubin C, du Cheyron D, Mermel LA, Timsit JF, Parienti JJ
Development and validation of a multivariable model predicting the required catheter dwell time among mechanically ventilated critically ill patients in three randomized trials.
Annals of Intensive Care 2023, 13, 5.

Roux D, Benichou N, Hajage D, Martin-Lefèvre L, de Prost N, Lerolle N, Titeca-Beauport D, Boulet E, Mayaux J, Mégarbane B, Mahjoub K, Carpentier D, Nseir S, Tubach F, Ricard JD, Dreyfuss D, Gaudry S, AKIKI Study group
Impact of renal replacement therapy strategy on beta-lactam plasma concentrations: the BETAKIKI study-an ancillary study of a randomized controlled trial.
Annals of Intensive Care 2023, 13, 11.

Jeantin L, Dupuis C, Vellieux G, Jaquet P, de Montmollin E, Timsit JF, Sonneville R, ENCEPHALITICA Study Group
Electroencephalography for prognostication of outcome in adults with severe herpes simplex encephalitis.
Annals of Intensive Care 2023, 13, 10.

Bourcier S, Coutrot M, Ferré A, Van Grunderbeeck N, Charpentier J, Hraiech S, Azoulay E, Nseir S, Aissaoui N, Messika J, Fillatre P, Persichini R, Carreira S, Lautrette A, Delmas C, Terzi N, Mégarbane B, Lascarrou JB, Razazi K, Repessé X, Pichereau C, Contou D, Frérou A, Barbier F, Ehrmann S, de Montmollin E, Sztrymf B, Morawiec E, Bigé N, Reuter D, Schnell D, Ellrodt O, Dellamonica J, Combes A, Schmidt M
Critically ill severe hypothyroidism: a retrospective multicenter cohort study.
Annals of Intensive Care 2023, 13, 15.

Mekontso Dessap A, Papazian L, Schaller M, Nseir S, Megarbane B, Haudebourg L, Timsit JF, Teboul JL, Kuteifan K, Gainnier M, Slama M, Houeto P, Lecourt L, Mercat A, Vieillard-Baron A
Inhaled nitric oxide in patients with acute respiratory distress syndrome caused by COVID-19: treatment modalities, clinical response, and outcomes.
Annals of Intensive Care 2023, 13, 57.

Barbier F, Hraiech S, Kernéis S, Veluppillai N, Pajot O, Poissy J, Roux D, Zahar JR, French Intensive Care Society
Rationale and evidence for the use of new beta-lactam/beta-lactamase inhibitor combinations and cefiderocol in critically ill patients.
Annals of Intensive Care 2023, 13, 65.

Helms J, Poissy J, Dequin PF, Timsit JF
Treatment of immunothrombosis dysregulation: high-dose corticosteroids is not the good option.
Annals of Intensive Care 2023, 13, 58.

Chevret S, Bouadma L, Dupuis C, Burdet C, Timsit JF, COVIDICUS RCT group
Which severe COVID-19 patients could benefit from high dose dexamethasone? A Bayesian post-hoc reanalysis of the COVIDICUS randomized clinical trial.
Annals of Intensive Care 2023, 13, 75.

Szychowiak P, Boulain T, Timsit JF, Elabaddi A, Argaud L, Ehrmann S, Issa N, Canet E, Martino F, Bruneel F, Quenot JP, Wallet F, Azoulay É, Barbier F
Clinical spectrum and prognostic impact of cancer in critically ill patients with HIV: a multicentre cohort study.
Annals of Intensive Care 2023, 13, 74.

Jouneau S, Ricard JD, Seguin-Givelet A, Bigé N, Contou D, Desmettre T, Hugenschmitt D, Kepka S, Le Gloan K, Maitre B, Mangiapan G, Marchand-Adam S, Mariolo A, Marx T, Messika J, Noël-Savina E, Oberlin M, Palmier L, Perruez M, Pichereau C, Roche N, Garnier M, Martinez M
SPLF/SMFU/SRLF/SFAR/SFCTCV Guidelines for the management of patients with primary spontaneous pneumothorax.
Annals of Intensive Care 2023, 13, 88.

Laurichesse G, Schwebel C, Buetti N, Neuville M, Siami S, Cohen Y, Laurent V, Mourvillier B, Reignier J, Goldgran-Toledano D, Ruckly S, de Montmollin E, Souweine B, Timsit JF, Dupuis C, OUTCOME R. E. A. network
Mortality, incidence, and microbiological documentation of ventilated acquired pneumonia (VAP) in critically ill patients with COVID-19 or influenza.
Annals of Intensive Care 2023, 13, 108.

Yi G, de Kraker MEA, Buetti N, Zhong X, Li J, Yuan Z, Zhu W, Zhou J, Zhou H
Risk factors for in-hospital mortality and secondary bacterial pneumonia among hospitalized adult patients with community-acquired influenza: a large retrospective cohort study.
Antimicrobial Resistance and Infection Control 2023, 12, 25.

Januel JM, Lotfinejad N, Grant R, Tschudin-Sutter S, Schreiber PW, Grandbastien B, Jent P, Lo Priore E, Scherrer A, Harbarth S, Catho G, Buetti N, Swissnoso
Predictive performance of automated surveillance algorithms for intravascular catheter bloodstream infections: a systematic review and meta-analysis.
Antimicrobial Resistance and Infection Control 2023, 12, 87.

Dalmasso G, Beyrouthy R, Brugiroux S, Ruppé E, Guillouard L, Bonnin V, Saint-Sardos P, Ghozlane A, Gaumet V, Barnich N, Delmas J, Bonnet R
Genes mcr improve the intestinal fitness of pathogenic E. coli and balance their lifestyle to commensalism.
Microbiome 2023, 11, 12.

Dalmasso G, Beyrouthy R, Brugiroux S, Ruppé E, Guillouard L, Bonnin V, Saint-Sardos P, Ghozlane A, Gaumet V, Barnich N, Delmas J, Bonnet R
Correction: Genes mcr improve the intestinal fitness of pathogenic E. coli and balance their lifestyle to commensalism.
Microbiome 2023, 11, 23.

de Prost N, Audureau E, Préau S, Favory R, Guigon A, Bay P, Heming N, Gault E, Pham T, Chaghouri A, Voiriot G, Morand-Joubert L, Jochmans S, Pitsch A, Meireles S, Contou D, Henry A, Joseph A, Chaix ML, Uhel F, Descamps D, Emery M, Garcia-Sanchez C, Luyt CE, Marot S, Pène F, Lhonneur AS, Gaudry S, Brichler S, Picard L, Mekontso Dessap A, Rodriguez C, Pawlotsky JM, Fourati S, SEVARVIR investigators
Clinical phenotypes and outcomes associated with SARS-CoV-2 Omicron variants BA.2, BA.5 and BQ.1.1 in critically ill patients with COVID-19: a prospective, multicenter cohort study.
Intensive Care Medicine Experimental 2023, 11, 48.

Touitou R, Bidet P, Dubois C, Partouche H, Bonacorsi S, Jung C, Cohen R, Levy C, Cohen JF
Diagnostic accuracy of a rapid nucleic acid test for group A streptococcal pharyngitis using saliva samples: protocol for a prospective multicenter study in primary care.
Diagnostic and Prognostic Research 2023, 7, 13.

Kerioui M, Bertrand J, Desmée S, Le Tourneau C, Mercier F, Bruno R, Guedj J
Assessing the Increased Variability in Individual Lesion Kinetics During Immunotherapy: Does It Exist, and Does It Matter?.
JCO precision oncology 2023, 7, e2200368.

Fayette L, Leroux R, Mentré F, Seurat J
Robust and Adaptive Two-stage Designs in Nonlinear Mixed Effect Models.
The AAPS journal 2023, 25, 71.

Pesonel E, Hoffmann I, Guiraud L, Bourner J, Diallo A, Dunning J, Horby P, Kali S, Laouénan C, Mentré F, Merson L, Molino D, Palich R, Rojek A, Tacconelli E, Tardivon C, MOSAIC study group, Yazdanpanah Y, Calmy A, Lescure FX, Olliaro P
MOSAIC: A cohort study of human mpox virus disease.
Wellcome Open Research 2023, 8, 415.

Tchoubou T, El-Hosni R, Dollat M, Jaquet P, Tournus C, Tandjaoui-Lambiotte Y, Da Silva D
Acute Respiratory Distress Syndrome due to Monkeypox Virus.
European Journal of Case Reports in Internal Medicine 2023, 10, 004126.

Paniagua-Diaz AM, Simón DM, Martínez C, Moreno E, Rodríguez-Ródenas A, Yago I, Marín JM, Artal P
Optical memory effect of excised cataractous human crystalline lenses.
Biomedical Optics Express 2023, 14, 639-650.

Nguyen BT, Marc A, Suñer C, Marks M, Ubals M, Hernández-Rodríguez Á, Melendez MÁ, Movie Group, Hruby DE, Russo AT, Mentré F, Mitjà O, Grosenbach DW, Guedj J
Early administration of tecovirimat shortens the time to mpox clearance in a model of human infection.
PLoS biology 2023, 21, e3002249.

Marc A, Marlin R, Donati F, Prague M, Kerioui M, Hérate C, Alexandre M, Dereuddre-Bosquet N, Bertrand J, Contreras V, Behillil S, Maisonnasse P, Van Der Werf S, Le Grand R, Guedj J
Impact of variants of concern on SARS-CoV-2 viral dynamics in non-human primates.
PLoS computational biology 2023, 19, e1010721.

Clairon Q, Prague M, Planas D, Bruel T, Hocqueloux L, Prazuck T, Schwartz O, Thiébaut R, Guedj J
Modeling the kinetics of the neutralizing antibody response against SARS-CoV-2 variants after several administrations of Bnt162b2.
PLoS computational biology 2023, 19, e1011282.

Burgaya J, Marin J, Royer G, Condamine B, Gachet B, Clermont O, Jaureguy F, Burdet C, Lefort A, de Lastours V, Denamur E, Galardini M, Blanquart F, Colibafi/Septicoli & Coliville groups
The bacterial genetic determinants of Escherichia coli capacity to cause bloodstream infections in humans.
PLoS genetics 2023, 19, e1010842.

Inzaule SC, Siedner MJ, Little SJ, Avila-Rios S, Ayitewala A, Bosch RJ, Calvez V, Ceccherini-Silberstein F, Charpentier C, Descamps D, Eshleman SH, Fokam J, Frenkel LM, Gupta RK, Ioannidis JPA, Kaleebu P, Kantor R, Kassaye SG, Kosakovsky Pond SL, Kouamou V, Kouyos RD, Kuritzkes DR, Lessells R, Marcelin AG, Mbuagbaw L, Minalga B, Ndembi N, Neher RA, Paredes R, Pillay D, Raizes EG, Rhee SY, Richman DD, Ruxrungtham K, Sabeti PC, Schapiro JM, Sirivichayakul S, Steegen K, Sugiura W, van Zyl GU, Vandamme AM, Wensing AMJ, Wertheim JO, Gunthard HF, Jordan MR, Shafer RW
Recommendations on data sharing in HIV drug resistance research.
PLoS medicine 2023, 20, e1004293.

Jaume L, Hau E, Monsel G, Mahé A, Bertolotti A, Petit A, Le B, Chauveau M, Duhamel E, Maisonobe T, Bagot M, Bouaziz JD, Mougari F, Cambau E, Jachiet M, Groupe d’infectiologie en dermatologie et des infections sexuellement transmissibles (GrIDIST)
Methotrexate as a corticosteroid-sparing agent in leprosy reactions: A French multicenter retrospective study.
PLoS neglected tropical diseases 2023, 17, e0011238.

Sahal MR, Senelle G, La K, Panda TW, Taura DW, Guyeux C, Cambau E, Sola C
Mycobacterium tuberculosis complex drug-resistance, phylogenetics, and evolution in Nigeria: Comparison with Ghana and Cameroon.
PLoS neglected tropical diseases 2023, 17, e0011619.

Puppo C, Hansmann Y, Moinot L, Duval X, Chirouze C, Préau M
The social representations of diagnosing Lyme disease.
PloS One 2023, 18, e0276800.

Reingruber J, Papale A, Ruckly S, Timsit JF, Holcman D
Data-driven multiscale dynamical framework to control a pandemic evolution with non-pharmaceutical interventions.
PloS One 2023, 18, e0278882.

Della Vecchia C, Ebah JV, Tubiana S, Guimard T, Piroth L, Jaffuel S, Gorenne I, Mourvillier B, Hoen B, Duval X, Préau M
Mid-term health-related quality of life in community-acquired bacterial meningitis survivors; the COMBAT study.
PloS One 2023, 18, e0281544.

Tchounga BK, Bertine M, Damond F, Ferré VM, Inwoley A, Boni SP, Moisan A, Plantier JC, Descamps D, Ekouevi DK, Charpentier C
Molecular confirmation of HIV-1 and HIV-2 coinfections among initially serologically dually-reactive samples from patients living in West Africa.
PloS One 2023, 18, e0283602.

Galerneau LM, Bailly S, Terzi N, Ruckly S, Garrouste-Orgeas M, Cohen Y, Hong Tuan Ha V, Gainnier M, Siami S, Dupuis C, Darmon M, Azoulay E, Forel JM, Sigaud F, Adrie C, Goldgran-Toledano D, Ferré A, de Montmollin E, Argaud L, Reignier J, Pepin JL, Timsit JF, OUTCOMEREA network
Corticosteroids for severe acute exacerbations of chronic obstructive pulmonary disease in intensive care: From the French OUTCOMEREA cohort.
PloS One 2023, 18, e0284591.

Dinh A, Drouet F, Dechartres A, Yordanov Y, Duran C, Schmidt N, Banzet A, Perrier MH, Mosquet N, Lescure FX, Jourdain P, Nizard J, Masingue X, AP-HP/Universities/Inserm COVID-19 research collaboration
Pregnant women with mild COVID-19 followed in community setting by telemedicine, and factors associated with unfavorable outcome.
PloS One 2023, 18, e0288845.

Tarhini H, Waked R, Rahi M, Haddad N, Dorent R, Randoux C, Bunel V, Lariven S, Deconinck L, Rioux C, Yazdanpanah Y, Joly V, Ghosn J
Investigating infectious outcomes in adult patients undergoing solid organ transplantation: A retrospective single-center experience, Paris, France.
PloS One 2023, 18, e0291860.

Ouldali N, Le Roux E, Faye A, Leblanc C, Angoulvant F, Korb D, Delcour C, Caula C, Wohrer D, Rybak A, Delafoy M, Carrié C, Strullu M, Oualha M, Levy R, Mimoun C, Griffon L, Nuzzo A, Eyraud C, Levy M, Ellul P
Early formative objective structured clinical examinations for students in the pre-clinical years of medical education: A non-randomized controlled prospective pilot study.
PloS One 2023, 18, e0294022.

Gaschignard J, Koehl B, Rees DC, Rincón-López E, Vanderfaeillie A, Pascault A, Allali S, Cela E, Odièvre MH, Hau I, Oliveira M, Guillaumat C, Brousse V, de Montalembert M, Navarro Gómez ML, Beldjoudi N, Bardon-Cancho EJ, Epalza C, BACT-SPRING study group
Invasive Bacterial Infections in Children With Sickle Cell Disease: 2014-2019.
Pediatrics 2023, 152, e2022061061.

Ouldali N, Son MBF, McArdle AJ, Vito O, Vaugon E, Belot A, Leblanc C, Murray NL, Patel MM, Levin M, Randolph AG, Angoulvant F, BATS CONSORTIUM, the OVERCOMING COVID-19 INVESTIGATORS, and the FRENCH COVID-19 PEDIATRIC INFLAMMATION CONSORTIUM AND PANDOR STUDY GROUP
Immunomodulatory Therapy for MIS-C.
Pediatrics 2023, 152, e2022061173.

Kali S, Bourner J, Calmy A, Laouénan C, Merson L, Cervantes-Gonzalez M, Rojek A, Pesonel E, Guiraud L, Tardivon C, Descamps D, Diallo A, Gibowski S, Rosenthal E, Petrov-Sanchez V, Letrou S, Hoffmann I, Le Mestre S, Mentré F, Yazdanpanah Y, Olliaro P, Lescure FX
[MOSAIC: a European cohort study of human Mpox - the challenges of clinical research in outbreaks].
Virologie (Montrouge, France) 2023, 27, 23-26.

Kali S, Bourner J, Calmy A, Laouénan C, Merson L, Cervantes-Gonzalez M, Rojek A, Pesonel E, Guiraud L, Tardivon C, Descamps D, Diallo A, Gibowski S, Rosenthal E, Petrov-Sanchez V, Letrou S, Hoffmann I, Le Mestre S, Mentré F, Yazdanpanah Y, Olliaro P, Lescure FX
MOSAIC: a European cohort study of human Mpox - the challenges of clinical research in outbreaks.
Virologie (Montrouge, France) 2023, 27, 12-15.

Friedman D, Grimaldi L, Cariou A, Aegerter P, Gaudry S, Ben Salah A, Oueslati H, Megarbane B, Meunier-Beillard N, Quenot JP, Schwebel C, Jacob L, Robin Lagandré S, Kalfon P, Sonneville R, Siami S, Mazeraud A, Sharshar T
Correction: Impact of a Postintensive Care Unit Multidisciplinary Follow-up on the Quality of Life (SUIVI-REA): Protocol for a Multicenter Randomized Controlled Trial.
JMIR research protocols 2023, 12, e47929.

Castera L, Laouenan C, Vallet-Pichard A, Vidal-Trécan T, Manchon P, Paradis V, Roulot D, Gault N, Boitard C, Terris B, Bihan H, Julla JB, Radu A, Poynard T, Brzustowsky A, Larger E, Czernichow S, Pol S, Bedossa P, Valla D, Gautier JF, QUID-NASH investigators
High Prevalence of NASH and Advanced Fibrosis in Type 2 Diabetes: A Prospective Study of 330 Outpatients Undergoing Liver Biopsies for Elevated ALT, Using a Low Threshold.
Diabetes Care 2023, 46, 1354-1362.

Lacarra B, Geslain G, Maroni A, Naudin J, Matrot B, Dauger S
Tracheal cuff pressure control in intubated young children: a randomized crossover trial of two cuff-pressure regulators.
Minerva Anestesiologica 2023, 89, 365-367.

Mansour I, Godono A, Sansone E, Visci G, Spiteri G, Lourdes Monaco MG, Mates D, Rascu A, Duval X, Pira E, Ciocan C, Violante F, Lodi V, De Palma G, Sala E, Dell'Olmo M, Negro C, Casolari L, Abedini M, Ditano G, Asafo S, Boffetta P, Working Group OW
Factors Associated with SARS-CoV-2 Infection before Vaccination among European Health Care Workers.
La Medicina Del Lavoro 2023, 114, e2023022.

Ruppé E, Network for Enhancing Tricycle ESBL Surveillance Efficiency (NETESE) group
Lessons from a global antimicrobial resistance surveillance network.
Bulletin of the World Health Organization 2023, 101, 672-678.

Maubaret C, Caméléna F, Mrimèche M, Braille A, Liberge M, Mainardis M, Guillaume C, Noel F, Bébéar C, Molina JM, Lot F, Chazelle E, Berçot B
Two cases of extensively drug-resistant (XDR) Neisseria gonorrhoeae infection combining ceftriaxone-resistance and high-level azithromycin resistance, France, November 2022 and May 2023.
Euro Surveillance: Bulletin Europeen Sur Les Maladies Transmissibles = European Communicable Disease Bulletin 2023, 28,

Rose AM, Nicolay N, Sandonis Martín V, Mazagatos C, Petrović G, Niessen FA, Machado A, Launay O, Denayer S, Seyler L, Baruch J, Burgui C, Loghin II, Domegan L, Vaikutytė R, Husa P, Panagiotakopoulos G, Aouali N, Dürrwald R, Howard J, Pozo F, Sastre-Palou B, Nonković D, Knol MJ, Kislaya I, Luong Nguyen LB, Bossuyt N, Demuyser T, Džiugytė A, Martínez-Baz I, Popescu C, Duffy R, Kuliešė M, Součková L, Michelaki S, Simon M, Reiche J, Otero-Barrós MT, Lovrić Makarić Z, Bruijning-Verhagen PC, Gomez V, Lesieur Z, Barbezange C, Van Nedervelde E, Borg ML, Castilla J, Lazar M, O'Donnell J, Jonikaitė I, Demlová R, Amerali M, Wirtz G, Tolksdorf K, Valenciano M, Bacci S, Kissling E, I-MOVE-COVID-19 hospital study team, VEBIS hospital study team, Members of the I-MOVE-COVID-19 and VEBIS hospital study teams (in addition to the named authors)
Vaccine effectiveness against COVID-19 hospitalisation in adults (≥ 20 years) during Alpha- and Delta-dominant circulation: I-MOVE-COVID-19 and VEBIS SARI VE networks, Europe, 2021.
Euro Surveillance: Bulletin Europeen Sur Les Maladies Transmissibles = European Communicable Disease Bulletin 2023, 28, 2300186.

Rose AM, Nicolay N, Sandonis Martín V, Mazagatos C, Petrović G, Baruch J, Denayer S, Seyler L, Domegan L, Launay O, Machado A, Burgui C, Vaikutyte R, Niessen FA, Loghin II, Husa P, Aouali N, Panagiotakopoulos G, Tolksdorf K, Horváth JK, Howard J, Pozo F, Gallardo V, Nonković D, Džiugytė A, Bossuyt N, Demuyser T, Duffy R, Luong Nguyen LB, Kislaya I, Martínez-Baz I, Gefenaite G, Knol MJ, Popescu C, Součková L, Simon M, Michelaki S, Reiche J, Ferenczi A, Delgado-Sanz C, Lovrić Makarić Z, Cauchi JP, Barbezange C, Van Nedervelde E, O'Donnell J, Durier C, Guiomar R, Castilla J, Jonikaite I, Bruijning-Verhagen PC, Lazar M, Demlová R, Wirtz G, Amerali M, Dürrwald R, Kunstár MP, Kissling E, Bacci S, Valenciano M, I-MOVE-COVID-19 hospital study team, VEBIS hospital study team, Members of the I-MOVE-COVID-19 and VEBIS hospital study teams (in addition to authors above)
Vaccine effectiveness against COVID-19 hospitalisation in adults (≥ 20 years) during Omicron-dominant circulation: I-MOVE-COVID-19 and VEBIS SARI VE networks, Europe, 2021 to 2022.
Euro Surveillance: Bulletin Europeen Sur Les Maladies Transmissibles = European Communicable Disease Bulletin 2023, 28, 2300187.

Geslain G, Cointe A, Bidet P, Courroux C, Abasse S, Mariani P, Bonacorsi S
Fatal Meningitis from Shiga Toxin-Producing Escherichia coli in 2 Full-Term Neonates, France.
Emerging Infectious Diseases 2023, 29, 1703-1705.

Jones G, Mariani-Kurkdjian P, Cointe A, Bonacorsi S, Lefèvre S, Weill FX, Le Strat Y
Sporadic Shiga Toxin-Producing Escherichia coli-Associated Pediatric Hemolytic Uremic Syndrome, France, 2012-2021.
Emerging Infectious Diseases 2023, 29, 2054-2064.

Valeyre D, Brauner M, Bernaudin JF, Carbonnelle E, Duchemann B, Rotenberg C, Berger I, Martin A, Nunes H, Naccache JM, Jeny F
Differential diagnosis of pulmonary sarcoidosis: a review.
Frontiers in Medicine 2023, 10, 1150751.

Jolivet S, Couturier J, Grohs P, Vilfaillot A, Zahar JR, Frange P, Casetta A, Moulin V, Lawrence C, Baune P, Bourgeois C, Bouffier A, Laussucq C, Sienzonit L, Picard S, Podglajen I, Kassis-Chikhani N, Barbut F
Prevalence and risk factors of toxigenic Clostridioides difficile asymptomatic carriage in 11 French hospitals.
Frontiers in Medicine 2023, 10, 1221363.

Blachez M, Boussier J, Mariani P, Caula C, Gaschignard J, Lefèvre-Utile A
Detection of enterovirus in cerebrospinal fluids without pleocytosis in febrile infants under 3 months old reduces antibiotherapy duration.
Frontiers in Pediatrics 2023, 11, 1122460.

Morat B, Lucidarme N, Gibert A, Harbulot C, Lachaume N, Gréteau S, Basmaci R
Impact of lockdown on children with type-1 diabetes: returning to the community was associated with a decrease in HbA1c.
Frontiers in Pediatrics 2023, 11, 1245861.

Bornand E, Letourneux F, Deschanvres C, Boutoille D, Lucet JC, Lepelletier D, Leclere B, Mayol S, Peiffer-Smadja N, Birgand G
Social representations of mask wearing in the general population during the COVID-19 pandemic.
Frontiers in Public Health 2023, 11, 1136980.

Brun-Rambaud G, Alcouffe L, Tareau MA, Adenis A, Vignier N
Access to health care for migrants in French Guiana in 2022: a qualitative study of health care system actors.
Frontiers in Public Health 2023, 11, 1185341.

Tran-Dinh A, Tir I, Tanaka S, Atchade E, Lortat-Jacob B, Jean-Baptiste S, Zappella N, Boudinet S, Castier Y, Mal H, Mordant P, Ben Abdallah I, Bunel V, Messika J, Armand-Lefèvre L, Grall N, Montravers P
Impact of Culture-Positive Preservation Fluid on Early Morbidity and Mortality After Lung Transplantation.
Transplant International: Official Journal of the European Society for Organ Transplantation 2023, 36, 10826.

Sandot A, Grall N, Rodier T, Bunel V, Godet C, Weisenburger G, Tran-Dinh A, Montravers P, Mordant P, Castier Y, Eloy P, Armand-Lefevre L, Mal H, Messika J
Risk of Bronchial Complications After Lung Transplantation With Respiratory Corynebacteria. Results From a Monocenter Retrospective Cohort Study.
Transplant International: Official Journal of the European Society for Organ Transplantation 2023, 36, 10942.

Nel I, Parmentier C, Dehoux L, Minier M, Duneton C, Charbit M, Baudouin V, Bidet P, Carol A, Cheyssac E, Delbet JD, Guérin-El Khourouj V, Louillet F, Ulinski T, Delaugerre C, Carcelain G, Hogan J
Optimizing COVID-19 Vaccination Strategy in Pediatric Kidney Transplant Recipients: Humoral and Cellular Response to SARS-CoV-2 mRNA Vaccination.
Transplant International: Official Journal of the European Society for Organ Transplantation 2023, 36, 11153.

Serris A, Coussement J, Pilmis B, De Lastours V, Dinh A, Parquin F, Epailly E, Ader F, Lortholary O, Morelon E, Kamar N, Forcade E, Lebeaux D, Dumortier J, Conti F, Lefort A, Scemla A, Kaminski H
New Approaches to Manage Infections in Transplant Recipients: Report From the 2023 GTI (Infection and Transplantation Group) Annual Meeting.
Transplant International: Official Journal of the European Society for Organ Transplantation 2023, 36, 11859.

Chosidow S, Fantin B, Nicolas I, Mascary JB, Chau F, Bordeau V, Verdier MC, Rocheteau P, Guérin F, Cattoir V, de Lastours V
Synergistic Activity of Pep16, a Promising New Antibacterial Pseudopeptide against Multidrug-Resistant Organisms, in Combination with Colistin against Multidrug-Resistant Escherichia coli, In Vitro and in a Murine Peritonitis Model.
Antibiotics (Basel, Switzerland) 2023, 12, 81.

de Tymowski C, Sahnoun T, Provenchere S, Para M, Derre N, Mutuon P, Duval X, Grall N, Iung B, Kernéis S, Lucet JC, Montravers P
Impact of Antibiotic Prophylaxis on Surgical Site Infections in Cardiac Surgery.
Antibiotics (Basel, Switzerland) 2023, 12, 85.

Senneville E, Gachet B, Blondiaux N, Robineau O
Do Anti-Biofilm Antibiotics Have a Place in the Treatment of Diabetic Foot Osteomyelitis?.
Antibiotics (Basel, Switzerland) 2023, 12,

López de Egea G, González-Díaz A, Guédon G, Lao J, Berbel D, Casabella A, Marimón JM, Cercenado E, Fernández-Delgado L, Chiapello H, Lacroix T, Domínguez MÁ, Leblond-Bourget N, Ardanuy C
A New Integrative and Mobilizable Element Is a Major Contributor to Tetracycline Resistance in Streptococcus dysgalactiae subsp. equisimilis.
Antibiotics (Basel, Switzerland) 2023, 12, 579.

Chaïbi K, Jaureguy F, Do Rego H, Ruiz P, Mory C, El Helali N, Mrabet S, Mizrahi A, Zahar JR, Pilmis B
What to Do with the New Antibiotics?.
Antibiotics (Basel, Switzerland) 2023, 12, 654.

Thy M, Timsit JF, de Montmollin E
Aminoglycosides for the Treatment of Severe Infection Due to Resistant Gram-Negative Pathogens.
Antibiotics (Basel, Switzerland) 2023, 12, 860.

Wicky PH, Poiraud J, Alves M, Patrier J, d'Humières C, Lê M, Kramer L, de Montmollin É, Massias L, Armand-Lefèvre L, Timsit JF
Cefiderocol Treatment for Severe Infections due to Difficult-to-Treat-Resistant Non-Fermentative Gram-Negative Bacilli in ICU Patients: A Case Series and Narrative Literature Review.
Antibiotics (Basel, Switzerland) 2023, 12, 991.

Rybak A, Levy C, Ouldali N, Bonacorsi S, Béchet S, Delobbe JF, Batard C, Donikian I, Goldrey M, Assouline J, Cohen R, Varon E
Dynamics of Antibiotic Resistance of Streptococcus pneumoniae in France: A Pediatric Prospective Nasopharyngeal Carriage Study from 2001 to 2022.
Antibiotics (Basel, Switzerland) 2023, 12, 1020.

Assad Z, Cohen R, Varon E, Levy C, Bechet S, Corrard F, Werner A, Ouldali N, Bonacorsi S, Rybak A
Antibiotic Resistance of Haemophilus influenzae in Nasopharyngeal Carriage of Children with Acute Otitis Media and in Middle Ear Fluid from Otorrhea.
Antibiotics (Basel, Switzerland) 2023, 12, 1605.

Farrugia MA, Le Corvec M, Renou C, Nousbaum JB, Ouizeman DJ, Sire O, Loréal O, Tariel H, Bernard J, Piche T, Tran A, Ait-Oufella H, Landraud L, Gual P, Anty R, The Cytokine Ascites Group n
Mid-Infrared Spectroscopy as a New Tool for Ruling Out Spontaneous Bacterial Peritonitis: A Proof-of-Concept Study.
Biomedicines 2023, 11, 838.

Pilmis B, Kherabi Y, Huriez P, Zahar JR, Mokart D
Infectious Complications of Targeted Therapies for Solid Cancers or Leukemias/Lymphomas.
Cancers 2023, 15, 1989.

Nardin C, Hennemann A, Diallo K, Funck-Brentano E, Puzenat E, Heidelberger V, Jeudy G, Samimi M, Lesage C, Boussemart L, Peuvrel L, Rouanet J, Brunet-Possenti F, Gerard E, Seris A, Jouary T, Saint-Jean M, Puyraveau M, Saiag P, Aubin F
Efficacy of Immune Checkpoint Inhibitor (ICI) Rechallenge in Advanced Melanoma Patients' Responders to a First Course of ICI: A Multicenter National Retrospective Study of the French Group of Skin Cancers (Groupe de Cancérologie Cutanée, GCC).
Cancers 2023, 15, 3564.

Reichert C, Baldini C, Mezghani S, Maubec E, Longvert C, Mortier L, Quereux G, Jannic A, Machet L, de Quatrebarbes J, Nardin C, Beneton N, Amini Adle M, Funck-Brentano E, Descamps V, Hachon L, Malissen N, Baroudjian B, Brunet-Possenti F, Groupe de Cancérologie Cutanée
Combined Nivolumab and Ipilimumab in Octogenarian and Nonagenarian Melanoma Patients.
Cancers 2023, 15, 4330.

Ghazali DA, Bouzid D, Frachon A, Ait-Abdesselam S, Kenway P, Choquet C, Casalino E
Pain Self-Management with Inhaled Methoxyflurane by Emergency Department Trauma Patients: A Prospective, Interventional, Single-Center Study.
International Journal of Environmental Research and Public Health 2023, 20, 6107.

Wicky PH, Dupuis C, Cerf C, Siami S, Cohen Y, Laurent V, Mourvillier B, Reignier J, Goldgran-Toledano D, Schwebel C, Ruckly S, de Montmollin E, Buetti N, Timsit JF
Ventilator-Associated Pneumonia in COVID-19 Patients Admitted in Intensive Care Units: Relapse, Therapeutic Failure and Attributable Mortality-A Multicentric Observational Study from the OutcomeRea Network.
Journal of Clinical Medicine 2023, 12, 1298.

Marcellier G, Dupont A, Bourgeois-Moine A, Le Tohic A, De Carne-Carnavalet C, Poujade O, Girard G, Benbara A, Mandelbrot L, Abramowitz L
Risk Factors for Anal Continence Impairment Following a Second Delivery after a First Traumatic Delivery: A Prospective Cohort Study.
Journal of Clinical Medicine 2023, 12, 1531.

Timsit JF
After SARS-CoV-2 Pandemics: New Insights into ICU-Acquired Pneumonia.
Journal of Clinical Medicine 2023, 12, 2160.

Sellem B, Abdi B, Lê M, Tubiana R, Valantin MA, Seang S, Schneider L, Fayçal A, Peytavin G, Soulié C, Marcelin AG, Katlama C, Pourcher V, Palich R
Intermittent Bictegravir/Emtricitabine/Tenofovir Alafenamide Treatment Maintains High Level of Viral Suppression in Virally Suppressed People Living with HIV.
Journal of Personalized Medicine 2023, 13, 583.

Hayotte A, Mariani-Kurkdjian P, Boizeau P, Dauger S, Riaud C, Lacarra B, Bourmaud A, Levy M
Viral Identification Using Multiplex Polymerase Chain Reaction Testing Does Not Reduce Antibiotic Prescribing in Paediatric Intensive Care Units.
Microorganisms 2023, 11, 884.

Rezzoug I, Visseaux B, Bertine M, Parisey M, Bonnal C, Ruppe E, Descamps D, Timsit JF, Yazdanpanah Y, Armand-Lefevre L, Houze S, Argy N
Faecal Viral Excretion and Gastrointestinal Co-Infection Do Not Explain Digestive Presentation in COVID-19 Patients.
Microorganisms 2023, 11, 1780.

Eid R, Zahar JR, Ait Ali C, Mizrahi A, Ibrahim R, Banh E, Halouani H, Jauréguy F, Pilmis B, Saliba R
Bloodstream Infections: Comparison of Diagnostic Methods and Therapeutic Consequences between a Hospital in a Resource-Limited Setting and Two French Hospitals.
Microorganisms 2023, 11, 2136.

Saliba R, Zahar JR, Dabar G, Riachy M, Karam-Sarkis D, Husni R
Limiting the Spread of Multidrug-Resistant Bacteria in Low-to-Middle-Income Countries: One Size Does Not Fit All.
Pathogens (Basel, Switzerland) 2023, 12, 144.

de Crane D'Heysselaer S, Parisi G, Lisson M, Bruyère O, Donneau AF, Fontaine S, Gillet L, Bureau F, Darcis G, Thiry E, Ducatez M, Snoeck CJ, Zientara S, Haddad N, Humblet MF, Ludwig-Begall LF, Daube G, Thiry D, Misset B, Lambermont B, Tandjaoui-Lambiotte Y, Zahar JR, Sartor K, Noël C, Saegerman C, Haubruge E
Systematic Review of the Key Factors Influencing the Indoor Airborne Spread of SARS-CoV-2.
Pathogens (Basel, Switzerland) 2023, 12, 382.

Weissfuss C, Wienhold SM, Bürkle M, Gaborieau B, Bushe J, Behrendt U, Bischoff R, Korf IHE, Wienecke S, Dannheim A, Ziehr H, Rohde C, Gruber AD, Ricard JD, Debarbieux L, Witzenrath M, Nouailles G
Repetitive Exposure to Bacteriophage Cocktails against Pseudomonas aeruginosa or Escherichia coli Provokes Marginal Humoral Immunity in Naïve Mice.
Viruses 2023, 15, 387.

Charpentier C, Le Hingrat Q, Ferré VM, Damond F, Descamps D
Future of Antiretroviral Drugs and Evolution of HIV-1 Drug Resistance.
Viruses 2023, 15, 540.

Sartori P, Egloff C, Hcini N, Vauloup Fellous C, Périllaud-Dubois C, Picone O, Pomar L
Primary, Secondary, and Tertiary Prevention of Congenital Cytomegalovirus Infection.
Viruses 2023, 15, 819.

Claudet A, De Luca D, Mosnino E, Mattern J, Picone O, Sibiude J, Wafo E, Tsatsaris V, Giral E, Grefenstette I, Carrara J, Badr DA, Saint-Frison MH, Prevot S, Benachi A, Vivanti AJ
Impact of SARS-CoV-2 Infection on Unvaccinated Pregnant Women: Non-Reassuring Fetal Heart Rate Tracing Because of Placentitis.
Viruses 2023, 15, 1069.

Azzini AM, Canziani LM, Davis RJ, Mirandola M, Hoelscher M, Meyer L, Laouénan C, Giannella M, Rodríguez-Baño J, Boffetta P, Mates D, Malhotra-Kumar S, Scipione G, Stellmach C, Rinaldi E, Hasenauer J, Tacconelli E
How European Research Projects Can Support Vaccination Strategies: The Case of the ORCHESTRA Project for SARS-CoV-2.
Vaccines 2023, 11, 1361.

Goulenok T, Mendes C, Dayan L, Ferre VM, Bucau M, Farhi F, Papo T, Sacré K
Improving Human Papillomavirus-Related Cervical Cancer Screening in Patients With Systemic Lupus Erythematosus.
The Journal of Rheumatology 2023, jrheum.2022-1335.

Mignot S, Berthome AC, Andre M, Breque C, Richer JP, Ghazali D, Oriot D
Development and validation of a performance assessment checklist for insertion of an intra-uterine device (IUD).
Ginekologia Polska 2023

Coppée R, Blanquart F, Jary A, Leducq V, Ferré VM, Franco Yusti AM, Daniel L, Charpentier C, Lebourgeois S, Zafilaza K, Calvez V, Descamps D, Marcelin AG, Visseaux B, Bridier-Nahmias A
Phylodynamics of SARS-CoV-2 in France, Europe, and the world in 2020.
eLife 2023, 12, e82538.

 2022                                                                            

Bouadma L, Mekontso-Dessap A, Burdet C, Merdji H, Poissy J, Dupuis C, Guitton C, Schwebel C, Cohen Y, Bruel C, Marzouk M, Geri G, Cerf C, Mégarbane B, Garçon P, Kipnis E, Visseaux B, Beldjoudi N, Chevret S, Timsit JF, COVIDICUS Study Group
High-Dose Dexamethasone and Oxygen Support Strategies in Intensive Care Unit Patients With Severe COVID-19 Acute Hypoxemic Respiratory Failure: The COVIDICUS Randomized Clinical Trial.
JAMA internal medicine 2022, 182, 906-916.

Marcellin L, Goffinet F, Azria E, Thomin A, Garabedian C, Sibiude J, Verspyck E, Koskas M, Santulli P, Rousseau J, Ancel PY, Chapron C
Association Between Endometriosis Phenotype and Preterm Birth in France.
JAMA network open 2022, 5, e2147788.

Rybak A, Levy C, Angoulvant F, Auvrignon A, Gembara P, Danis K, Vaux S, Levy-Bruhl D, van der Werf S, Béchet S, Bonacorsi S, Assad Z, Lazzati A, Michel M, Kaguelidou F, Faye A, Cohen R, Varon E, Ouldali N
Association of Nonpharmaceutical Interventions During the COVID-19 Pandemic With Invasive Pneumococcal Disease, Pneumococcal Carriage, and Respiratory Viral Infections Among Children in France.
JAMA network open 2022, 5, e2218959.

Assad Z, Michel M, Valtuille Z, Lazzati A, Boizeau P, Madhi F, Gaschignard J, Pham LL, Caseris M, Cohen R, Kaguelidou F, Varon E, Alberti C, Faye A, Angoulvant F, Koehl B, Ouldali N
Incidence of Acute Chest Syndrome in Children With Sickle Cell Disease Following Implementation of the 13-Valent Pneumococcal Conjugate Vaccine in France.
JAMA network open 2022, 5, e2225141.

Solignac F, Ouldali N, Aupiais C, Casha P, Cohen R, Levy C, Angoulvant F
Analysis of COVID-19 Vaccination Status Among Parents of Hospitalized Children Younger Than 5 Years With SARS-CoV-2 Infection During the Delta and Omicron Waves.
JAMA network open 2022, 5, e2242295.

Ningarhari M, Mourad A, Delacôte C, Ntandja Wandji LC, Lassailly G, Louvet A, Dharancy S, Mathurin P, Deuffic-Burban S
Benefits of tailored hepatocellular carcinoma screening in patients with cirrhosis on cancer-specific and overall mortality: A modeling approach.
Hepatology Communications 2022, 6, 2964-2974.

Villemonteix J, Cohen L, Guihot A, Guérin V, Moulin C, Caseris M, Carol A, Bonacorsi S, Carcelain G
Comparison between enzyme-linked immunospot assay and intracellular cytokine flow cytometry assays for the evaluation of T cell response to SARS-CoV-2 after symptomatic COVID-19.
Immunity, Inflammation and Disease 2022, 10, e617.

Houhou-Fidouh N, Bucau M, Bertine M, Minh TNT, Picone O, Salakos E, Luton D
Preliminary results on transmission of SARS-CoV-2 antibodies to the fetus and serum neutralizing activity.
International Journal of Gynaecology and Obstetrics: The Official Organ of the International Federation of Gynaecology and Obstetrics 2022, 158, 476-478.

Castry M, Cousien A, Champenois K, Supervie V, Velter A, Ghosn J, Yazdanpanah Y, Paltiel AD, Deuffic-Burban S
Cost-effectiveness of hepatitis C virus test-and-treat and risk reduction strategies among men who have sex with men living with HIV in France.
Journal of the International AIDS Society 2022, 25, e26035.

Elie B, Roquebert B, Sofonea MT, Trombert-Paolantoni S, Foulongne V, Guedj J, Haim-Boukobza S, Alizon S
Variant-specific SARS-CoV-2 within-host kinetics.
Journal of Medical Virology 2022, 94, 3625-3633.

Khellaf L, Bouscarat F, Burrel S, Fidouh N, Hachon L, Bucau M, Lariven S, Boutolleau D, Joly V, Ghosn J, Le Pluart D, Thy M
Novel mutations in antiviral multiresistant HSV-2 genital lesion: A case report.
Journal of Medical Virology 2022, 94, 6122-6126.

Ayrolles A, Ellul P, Trebossen V, Houhou-Fidouh N, Bonacorsi S, Descamps D, Delorme R
Is SARS-CoV-2 seroconversion a risk factor for severe and acute psychiatric symptoms in children?.
Neuropsychopharmacology Reports 2022, 42, 218-220.

David M, Hcini N, Mandelbrot L, Sibiude J, Picone O
Fetal and neonatal abnormalities due to congenital syphilis: A literature review.
Prenatal Diagnosis 2022, 42, 643-655.

Pencole L, Sibiude J, Weingertner AS, Mandelbrot L, Vauloup-Fellous C, Picone O
Congenital lymphocytic choriomeningitis virus: A review.
Prenatal Diagnosis 2022, 42, 1059-1069.

Guk J, Bridier-Nahmias A, Magnan M, Grall N, Duval X, Clermont O, Ruppé E, d'Humières C, Tenaillon O, Denamur E, Mentré F, Guedj J, Burdet C, CEREMI study group
Modeling the bacterial dynamics in the gut microbiota following an antibiotic-induced perturbation.
CPT: pharmacometrics & systems pharmacology 2022, 11, 906-918.

Lavalley-Morelle A, Timsit JF, Mentré F, Mullaert J, OUTCOMEREA network
Joint modeling under competing risks: Application to survival prediction in patients admitted in Intensive Care Unit for sepsis with daily Sequential Organ Failure Assessment score assessments.
CPT: pharmacometrics & systems pharmacology 2022, 11, 1472-1484.

Ghazali DA, Ilha-Schuelter P, Barreyre L, Stephan O, Barbosa SS, Oriot D, Tourinho FSV, Plaisance P
Development and validation of the first performance assessment scale for interdisciplinary chest tube insertion: a prospective multicenter study.
European Journal of Trauma and Emergency Surgery: Official Publication of the European Trauma Society 2022

Buetti N, Rickard CM, Timsit JF
Catheter dressings.
Intensive Care Medicine 2022

Timsit JF, Tabah A, Mimoz O
Update on prevention of intra-vascular accesses complications.
Intensive Care Medicine 2022

Rouzé A, Estella Á, Timsit JF
Is (1,3)-β-D-glucan useless to guide antifungal therapy in ICU?.
Intensive Care Medicine 2022, 48, 930-932.

Tallarico RT, Deniau B, Fong N, Ghosn J, Legrand M, French-COVID and the FROG-ICU Investigators
Differences in HADS and SF-36 scores 1 year after critical illness in COVID-19 patients.
Intensive Care Medicine 2022, 48, 1245-1247.

De Pascale G, Antonelli M, Deschepper M, Arvaniti K, Blot K, Brown BC, de Lange D, De Waele J, Dikmen Y, Dimopoulos G, Eckmann C, Francois G, Girardis M, Koulenti D, Labeau S, Lipman J, Lipovetsky F, Maseda E, Montravers P, Mikstacki A, Paiva JA, Pereyra C, Rello J, Timsit JF, Vogelaers D, Blot S, Abdominal Sepsis Study (AbSeS) group and the Trials Group of the European Society of Intensive Care Medicine
Poor timing and failure of source control are risk factors for mortality in critically ill patients with secondary peritonitis.
Intensive Care Medicine 2022, 48, 1593-1606.

Bagshaw SM, Neto AS, Smith O, Weir M, Qiu H, Du B, Wang AY, Gallagher M, Bellomo R, Wald R
Impact of renal-replacement therapy strategies on outcomes for patients with chronic kidney disease: a secondary analysis of the STARRT-AKI trial..
Intensive care medicine 2022, 48, 1736-1750.

Gras J, Villar-Fernandez S, Baylac P, Xhaard A, Valade S, Camelena F, Bercot B, Touratier S, de Fontbrune FS, Molina JM, Lafaurie M
Successful cefiderocol therapy of severe infections due to difficult-to-treat Pseudomonas aeruginosa in two allogeneic hematopoietic stem cell transplantation recipients.
Annals of Hematology 2022, 101, 1365-1367.

Foutel-Rodier F, Blanquart F, Courau P, Czuppon P, Duchamps JJ, Gamblin J, Kerdoncuff É, Kulathinal R, Régnier L, Vuduc L, Lambert A, Schertzer E
From individual-based epidemic models to McKendrick-von Foerster PDEs: a guide to modeling and inferring COVID-19 dynamics.
Journal of Mathematical Biology 2022, 85, 43.

Kolakowska A, El Alaoui F, Ben Alba H, Challal S, Carbonnelle E, Jaureguy F
Vaginal microbiota as an unusual cause of spondylodiscitis.
Archives of Gynecology and Obstetrics 2022, 306, 109-114.

Chebib E, Maudoux A, Benoit C, Bernard S, Belarbi N, Parodi M, Picone O, Van Den Abbeele T, Wiener Vacher SR, Teissier N
Predictors of cochleovestibular dysfunction in children with congenital cytomegalovirus infection.
European Journal of Pediatrics 2022, 181, 2909-2918.

Dembinski J, Yoh T, Aussilhou B, Ftériche FS, Hounkonnou CPA, Hentic O, Cros J, Sauvanet A, Dokmak S
The long-term outcomes of laparoscopic versus open pancreatoduodenectomy for ampullary carcinoma showed similar survival: a case-matched comparative study.
Surgical Endoscopy 2022, 36, 4732-4740.

Mallet C, Meissburger V, Caseris M, Happiette A, Chinnappa J, Bonacorsi S, Simon AL, Ilharreborde B
Does the use of intrawound povidone-iodine irrigation and local vancomycin powder impact surgical site infection rate in adolescent idiopathic scoliosis surgery?.
European Spine Journal: Official Publication of the European Spine Society, the European Spinal Deformity Society, and the European Section of the Cervical Spine Research Society 2022, 31, 3020-3028.

Sokal A, Chawki S, Nguyen Y, Sauvanet A, Ponsot P, Maire F, Fantin B, de Lastours V
Specificities of acute cholangitis in patients with cancer: a retrospective comparative study of 130 episodes.
European Journal of Clinical Microbiology & Infectious Diseases: Official Publication of the European Society of Clinical Microbiology 2022, 41, 143-146.

Tanaka S, Thy M, Tashk P, Ribeiro L, Lortat-Jacob B, Hermieu JF, Zappella N, Rozencwajg S, Snauwaert A, Atchade E, Grall N, Assadi M, Tran-Dinh A, Montravers P
Impact of prior antibiotic therapy on severe necrotizing soft-tissue infections in ICU patients: results from a French retrospective and observational study.
European Journal of Clinical Microbiology & Infectious Diseases: Official Publication of the European Society of Clinical Microbiology 2022, 41, 109-117.

Beauruelle C, Plouzeau C, Grillon A, Isnard C, Corvec S, Degand N, Jacquier H, Amara M, Mizrahi A, Diedrich T, Piau C, Farfour E, Bonzon L, Le Brun C, Walewski V, Bille E, Dortet L, Guillard T, Soismier N, Le Guen R, Morand P, de Ponfilly GP, Le Monnier A, Héry-Arnaud G
Capnocytophaga zoonotic infections: a 10-year retrospective study (the French CANCAN study).
European Journal of Clinical Microbiology & Infectious Diseases: Official Publication of the European Society of Clinical Microbiology 2022, 41, 581-588.

Mizrahi A, Chat L, Danjean M, Mory C, Nguyen Van JC, de Ponfilly GP, Caméléna F, Le Monnier A, Bercot B, Birgy A, Jacquier H, Pilmis B
Inoculum effect of Enterobacterales co-expressing OXA-48 and CTX-M on the susceptibility to ceftazidime/avibactam and meropenem.
European Journal of Clinical Microbiology & Infectious Diseases: Official Publication of the European Society of Clinical Microbiology 2022, 41, 853-858.

Hobson CA, Bonacorsi S, Baruchel A, Tenaillon O, Birgy A
The interplay between anticancer challenges and the microbial communities from the gut.
European Journal of Clinical Microbiology & Infectious Diseases: Official Publication of the European Society of Clinical Microbiology 2022, 41, 691-711.

Le Bot A, Sokal A, Choquet A, Maire F, Fantin B, Sauvanet A, de Lastours V
Clinical and microbiological characteristics of reflux cholangitis following bilio-enteric anastomosis..
European journal of clinical microbiology & infectious diseases : official publication of the European Society of Clinical Microbiology 2022, 41, 1139-1143.

Garzaro M, Zhao LP, De Castro N, Mercier-Delarue S, Camelena F, Pereyre S, Gardette M, Berçot B, Malphettes M, Bébéar C, Bouaziz JD, Le Goff J, Galicier L, Salmona M
Metagenomic next-generation sequencing restores the diagnosis of a rare infectious complication of B cell depletion.
European Journal of Clinical Microbiology & Infectious Diseases: Official Publication of the European Society of Clinical Microbiology 2022, 41, 1269-1273.

Di Ciaccio M, Delabre RM, Vilotitch A, Corbelli GM, Villes V, Ros Sánchez A, Zantkuijl P, Sweers H, Sanchez F, Meulbroek M, Cairns G, Bernier A, Ghosn J, Carvalho Rocha LM, Cosmaro ML, Duken SB, Dan M, Schlegel V, Stranz R, Jonas KJ, Spire B, Rojas Castro D
PrEP in the Context of Other HIV Risk Reduction Strategies Among Men Who Have Sex with Men: Results from the Flash! PrEP in Europe Survey.
Archives of Sexual Behavior 2022, 51, 2451-2464.

Bolze A, Mogensen TH, Zhang SY, Abel L, Andreakos E, Arkin LM, Borghesi A, Brodin P, Hagin D, Novelli G, Okada S, Peter J, Renia L, Severe K, Tiberghien P, Vinh DC, COVID human genetic effort, Cirulli ET, Casanova JL, Hsieh EWY
Decoding the Human Genetic and Immunological Basis of COVID-19 mRNA Vaccine-Induced Myocarditis.
Journal of Clinical Immunology 2022, 42, 1354-1359.

Guhl M, Mercier F, Hofmann C, Sharan S, Donnelly M, Feng K, Sun W, Sun G, Grosser S, Zhao L, Fang L, Mentré F, Comets E, Bertrand J
Impact of model misspecification on model-based tests in PK studies with parallel design: real case and simulation studies.
Journal of Pharmacokinetics and Pharmacodynamics 2022, 49, 557-577.

Karila-Cohen P, Pelletier AL, Saker L, Laouénan C, Bachelet D, Khalil A, Arapis K
Staple Line Intrathoracic Migration After Sleeve Gastrectomy: Correlation between Symptoms, CT Three-Dimensional Stomach Analysis, and 24-h pH Monitoring.
Obesity Surgery 2022, 32, 1-9.

Duval X, Taha MK, Lamaury I, Escaut L, Gueit I, Manchon P, Tubiana S, Hoen B, COMBAT study group
One-Year Sequelae and Quality of Life in Adults with Meningococcal Meningitis: Lessons from the COMBAT Multicentre Prospective Study.
Advances in Therapy 2022, 39, 3031-3041.

Rossi G, Nguyen Y, Lafont E, Rossi B, Canouï E, Roux O, Dokmak S, Bert F, Fantin B, Lefort A
Large retrospective study analysing predictive factors of primary treatment failure, recurrence and death in pyogenic liver abscesses.
Infection 2022, 50, 1205-1215.

Akroum S, Tubiana S, de Broucker T, Dournon N, Varon E, Ploy MC, Mourvillier B, Oziol E, Lacassin F, Laurichesse H, Hoen B, Duval X, Burdet C, and the COMBAT study group
Long-term neuro-functional disability in adult patients with community-acquired bacterial meningitis.
Infection 2022, 50, 1363-1372.

Bassetti M, Vena A, Giacobbe DR, Trucchi C, Ansaldi F, Antonelli M, Adamkova V, Alicino C, Almyroudi MP, Atchade E, Azzini AM, Brugnaro P, Carannante N, Peghin M, Berruti M, Carnelutti A, Castaldo N, Corcione S, Cortegiani A, Dimopoulos G, Dubler S, García-Garmendia JL, Girardis M, Cornely OA, Ianniruberto S, Kullberg BJ, Lagrou K, Lebihan C, Luzzati R, Malbrain M, Merelli M, Marques AJ, Martin-Loeches I, Mesini A, Paiva JA, Raineri SM, Rautemaa-Richardson R, Schouten J, Spapen H, Tasioudis P, Timsit JF, Tisa V, Tumbarello M, Van den Berg CHSB, Veber B, Venditti M, Voiriot G, Wauters J, Zappella N, Montravers P, from the Study Group for Infections in Critically Ill Patients (ESGCIP) of the European Society of Clinical Microbiology and Infectious Diseases (ESCMID)
Risk Factors for Intra-Abdominal Candidiasis in Intensive Care Units: Results from EUCANDICU Study.
Infectious Diseases and Therapy 2022, 11, 827-840.

Béraud G, Tubiana S, Erpelding ML, Le Moing V, Chirouze C, Gorenne I, Manchon P, Tattevin P, Vernet V, Varon E, Hoen B, Duval X, AEPEI study group, COMBAT study group
Combined Bacterial Meningitis and Infective Endocarditis: When Should We Search for the Other When Either One is Diagnosed?.
Infectious Diseases and Therapy 2022

Ferré VM, Peiffer-Smadja N, Visseaux B, Descamps D, Ghosn J, Charpentier C
Omicron SARS-CoV-2 variant: What we know and what we don't.
Anaesthesia, Critical Care & Pain Medicine 2022, 41, 100998.

Buetti N, Mermel LA, Timsit JF
Routine catheter-tip cultures for assessing catheter-related bloodstream infections in randomised-controlled trials.
Anaesthesia, Critical Care & Pain Medicine 2022, 41, 101006.

Prague M, Alexandre M, Thiébaut R, Guedj J
Within-host models of SARS-CoV-2: What can it teach us on the biological factors driving virus pathogenesis and transmission?.
Anaesthesia, Critical Care & Pain Medicine 2022, 41, 101055.

Atchade E, Goldstein V, Viane S, Van Gysel D, Lolom I, Lortat-Jacob B, Tran-Dinh A, Ben Rehouma M, Lucet JC, Montravers P
Economic impact of an outbreak of carbapenemase producing-Enterobacteriaceae in a surgical intensive care unit.
Anaesthesia, Critical Care & Pain Medicine 2022, 101093.

Gouel-Cheron A, Kantor E, Rioux C, Kerneis S, Montravers P
Monkeypox-infected patients in the perioperative context: Recommendations from an expert centre.
Anaesthesia, Critical Care & Pain Medicine 2022, 41, 101122.

Bagou G, Sentilhes L, Mercier FJ, Berveiller P, Blanc J, Cesareo E, Dewandre PY, Douai B, Gloaguen A, Gonzalez M, Le Conte P, Le Gouez A, Madar H, Maisonneuve E, Morau E, Rackelboom T, Rossignol M, Sibiude J, Vaux J, Vivanti A, Goddet S, Rozenberg P, Garnier M, Chauvin A
Guidelines for the management of urgent obstetric situations in emergency medicine, 2022.
Anaesthesia, Critical Care & Pain Medicine 2022, 41, 101127.

Dudoignon E, Camelena F, Leone M, Dépret F
What's new in antibiotic stewardship for pneumonia in ICU?.
Anaesthesia, Critical Care & Pain Medicine 2022, 41, 101135.

Le Ray C, Rozenberg P, Kayem G, Harvey T, Sibiude J, Doret M, Parant O, Fuchs F, Vardon D, Azria E, Sénat MV, Ceccaldi PF, Seco A, Garabedian C, Chantry AA, Groupe de Recherche en Obstétrique et Gynécologie
Alternative to intensive management of the active phase of the second stage of labor: a multicenter randomized trial (Phase Active du Second STade trial) among nulliparous women with an epidural.
American Journal of Obstetrics and Gynecology 2022, 227, 639.e1-639.e15.

Boukobza M, Raffoul R, Duval X, Laissy JP
Premier cas d'endocardite infectieuse sur valve aortique prosthétique dû à Prevotella Intermedia.
Annales De Cardiologie Et D'angeiologie 2022, 71, 240-242.

Herms F, Poizeau F, Anyfantakis V, Bonhomme P, Chaine-Sidibé B, Louison JB, Berçot B, Bagot M, Fouéré S, Groupe infectiologie dermatologique et infections sexuellement transmissibles (GrIDIST) de la Société française de dermatologie (SFD)
Mycoplasma genitalium screening in a specialized French unit: A retrospective study.
Annales De Dermatologie Et De Venereologie 2022, 149, 165-168.

Minary K, Tanne C, Kwon T, Faudeux C, Clave S, Langevin L, Pietrement C, Enoch C, Parmentier C, Mariani-Kurkdjian P, Weill FX, Jones G, Djouadi N, Morin D, Fila M
Outbreak of hemolytic uremic syndrome with unusually severe clinical presentation caused by Shiga toxin-producing Escherichia coli O26:H11 in France.
Archives De Pediatrie: Organe Officiel De La Societe Francaise De Pediatrie 2022, 29, 448-452.

Sadowski E, Bercot B, Chauffour A, Gomez C, Varon E, Mainardis M, Sougakoff W, Mayer C, Sachon E, Anquetin G, Aubry A
Lipophilic quinolone derivatives: Synthesis and in vitro antibacterial evaluation.
Bioorganic & Medicinal Chemistry Letters 2022, 55, 128450.

Delattre R, Seurat J, Haddad F, Nguyen TT, Gaborieau B, Kane R, Dufour N, Ricard JD, Guedj J, Debarbieux L
Combination of in vivo phage therapy data with in silico model highlights key parameters for pneumonia treatment efficacy.
Cell Reports 2022, 39, 110825.

Duval X, Franck B, Revest M, Tron C, Chemouny JM, Lalanne S, Houot R, Verdier MC, Lemaitre F
Comparison of different equations for renal function evaluation as proxies for antibiotic drug clearance: The examples of amoxicillin and cloxacillin.
Clinical Biochemistry 2022, 109-110, 86-89.

Fillâtre P, Dufour MJ, Behillil S, Vatan R, Reusse P, Gabellec A, Velmans N, Montagne C, Geffroy Du Coudret S, Droumaguet E, Merour V, Enouf V, Buzelé R, Valence M, Guillotel E, Gagnière B, Baidaliuk A, Zhukova A, Tourdjman M, Thibault V, Grolhier C, Pronier C, Lescure FX, Simon-Loriere E, Costagliola D, Van Der Werf S, Tattevin P, Massart N
A new SARS-CoV-2 variant with high lethality poorly detected by RT-PCR on nasopharyngeal samples: an observational study.
Clinical Microbiology and Infection: The Official Publication of the European Society of Clinical Microbiology and Infectious Diseases 2022, 28, 298.e9-298.e15.

Fiolet T, Kherabi Y, MacDonald CJ, Ghosn J, Peiffer-Smadja N
Comparing COVID-19 vaccines for their characteristics, efficacy and effectiveness against SARS-CoV-2 and variants of concern: a narrative review.
Clinical Microbiology and Infection: The Official Publication of the European Society of Clinical Microbiology and Infectious Diseases 2022, 28, 202-221.

EU-Response investigators group, Diallo A, Trøseid M, Simensen VC, Boston A, Demotes J, Olsen IC, Chung F, Paiva JA, Hites M, Ader F, Arribas JR, Baratt-Due A, Melien Ø, Tacconelli E, Staub T, Greil R, Tsiodras S, Briel M, Esperou H, Mentré F, Eustace J, Saillard J, Delmas C, LeMestre S, Dumousseaux M, Costagliola D, Røttingen JA, Yazdanpanah Y
Accelerating clinical trial implementation in the context of the COVID-19 pandemic: challenges, lessons learned and recommendations from DisCoVeRy and the EU-SolidAct EU response group.
Clinical Microbiology and Infection: The Official Publication of the European Society of Clinical Microbiology and Infectious Diseases 2022, 28, 1-5.

Feldman SF, Temkin E, Wullfhart L, Nutman A, Schechner V, Shitrit P, Shvartz R, Schwaber MJ, Andremont A, Carmeli Y
A nationwide population-based study of Escherichia coli bloodstream infections: incidence, antimicrobial resistance and mortality.
Clinical Microbiology and Infection: The Official Publication of the European Society of Clinical Microbiology and Infectious Diseases 2022, 28, 879.e1-879.e7.

Trøseid M, Diallo A, Hites M, Røttingen JA, Yazdanpanah Y
Accelerating clinical trial implementation in the context of the COVID-19 pandemic: author's response.
Clinical Microbiology and Infection: The Official Publication of the European Society of Clinical Microbiology and Infectious Diseases 2022, 28, 743-744.

Dinh A, Dahmane L, Dahoumane M, Masingue X, Jourdain P, Lescure FX
Impact of Omicron surge in community setting in greater Paris area.
Clinical Microbiology and Infection: The Official Publication of the European Society of Clinical Microbiology and Infectious Diseases 2022, S1198-743X(22)00089-1.

Duvignaud A, Lhomme E, Onaisi R, Sitta R, Gelley A, Chastang J, Piroth L, Binquet C, Dupouy J, Makinson A, Lefèvre B, Naccache JM, Roussillon C, Landman R, Wallet C, Karcher S, Journot V, Nguyen D, Pistone T, Bouchet S, Lafon ME, Molimard M, Thiébaut R, de Lamballerie X, Joseph JP, Richert L, Saint-Lary O, Djabarouti S, Wittkop L, Anglaret X, Malvy D, Coverage Study Group
Inhaled ciclesonide for outpatient treatment of COVID-19 in adults at risk of adverse outcomes: a randomised controlled trial (COVERAGE).
Clinical Microbiology and Infection: The Official Publication of the European Society of Clinical Microbiology and Infectious Diseases 2022, S1198-743X(22)00108-2.

Ruppé E, d'Humières C, Armand-Lefèvre L
Inferring antibiotic susceptibility from metagenomic data: dream or reality?.
Clinical Microbiology and Infection: The Official Publication of the European Society of Clinical Microbiology and Infectious Diseases 2022, 28, 1225-1229.

Moussiegt A, Birgy A, Cointe A, Duval X, Bidet P, Bonacorsi S
Escherichia coli community-acquired meningitis in adults: a case series of 29 patients in France.
Clinical Microbiology and Infection: The Official Publication of the European Society of Clinical Microbiology and Infectious Diseases 2022, 28, 1304-1305.

Belan M, Charmet T, Schaeffer L, Tubiana S, Duval X, Lucet JC, Fontanet A, Birgand G, Kernéis S
SARS-CoV-2 exposures of healthcare workers from primary care, long-term care facilities and hospitals: a nationwide matched case-control study.
Clinical Microbiology and Infection: The Official Publication of the European Society of Clinical Microbiology and Infectious Diseases 2022, 28, 1471-1476.

Pilmis B, Weiss E, Scemla A, Monnier AL, Grossi PA, Slavin MA, Van Delden C, Lortholary O, Paugam-Burtz C, Zahar JR
Multidrug-resistant enterobacterales infections in abdominal solid organ transplantation.
Clinical Microbiology and Infection: The Official Publication of the European Society of Clinical Microbiology and Infectious Diseases 2022, S1198-743X(22)00318-4.

Danjean M, Hobson CA, Gits-Muselli M, Courroux C, Monjault A, Bonacorsi S, Birgy A
Evaluation of the inoculum effect of new antibiotics against carbapenem-resistant enterobacterales.
Clinical Microbiology and Infection: The Official Publication of the European Society of Clinical Microbiology and Infectious Diseases 2022, 28, 1503.e1-1503.e3.

Kraef C, Lindquist E, Svensson E, Cambau E
Diagnostic toolkit for tuberculosis: should we include urine lipoarabinomannan (LAM) detection in the WHO European Region?.
Clinical Microbiology and Infection: The Official Publication of the European Society of Clinical Microbiology and Infectious Diseases 2022, 28, 1406-1408.

Riveline JP, Vergés B, Detournay B, Picard S, Benhamou PY, Bismuth E, Bordier L, Jeandidier N, Joubert M, Roussel R, Sola-Gazagnes A, Bonnefond A, Clavel S, Velayoudom FL, Beltrand J, Hanaire H, Fontaine P, Thivolet C, Servy H, Tubiana S, Lion S, Gautier JF, Larger E, Vicaut E, Sablone L, Fagherazzi G, Cosson E
Design of a prospective, longitudinal cohort of people living with type 1 diabetes exploring factors associated with the residual cardiovascular risk and other diabetes-related complications: The SFDT1 study.
Diabetes & Metabolism 2022, 48, 101306.

Coléon S, Wiedemann A, Surénaud M, Lacabaratz C, Hue S, Prague M, Cervantes-Gonzalez M, Wang Z, Ellis J, Sansoni A, Pierini C, Bardin Q, Fabregue M, Sharkaoui S, Hoest P, Dupaty L, Picard F, El Hajj M, Centlivre M, Ghosn J, French COVID Cohort Study Group, Thiébaut R, Cardinaud S, Malissen B, Zurawski G, Zarubica A, Zurawski SM, Godot V, Lévy Y
Design, immunogenicity, and efficacy of a pan-sarbecovirus dendritic-cell targeting vaccine.
EBioMedicine 2022, 80, 104062.

Hermine O, Mariette X, Porcher R, Djossou F, Nguyen Y, Arlet JB, Savale L, Diehl JL, Georgin-Lavialle S, Cadranel J, Pialoux G, Lacombe K, Mekinian A, Gros H, Lescure X, Ghosn J, Coupez E, Grapin K, Rapp C, Michel M, Lecapitaine AL, Michot JM, Costedoat-Chalumeau N, Nguyen LBL, Semerano L, Raffi F, Aguillar C, Rouzaud C, Gottenberg JE, Hansmann Y, Bienvenu B, London J, Fantchou FS, Ackermann F, Gros A, Morel A, Gambier N, Sène D, Mégarbane B, Azoulay E, Bureau S, Dougados M, Emmerich J, Fartoukh M, Guidet B, Humbert M, Mahevas M, Pène F, Schlemmer F, Pourcher-Martinez V, Tibi A, Baron G, Perrodeau E, Baron S, Steg G, Yazdapanah Y, Simon T, Resche-Rigon M, Tharaux PL, Ravaud P
Tocilizumab plus dexamethasone versus dexamethasone in patients with moderate-to-severe COVID-19 pneumonia: A randomised clinical trial from the CORIMUNO-19 study group.
EClinicalMedicine 2022, 46, 101362.

Barrière J, Carles M, Audigier-Valette C, Re D, Adjtoutah Z, Seitz-Polski B, Gounant V, Descamps D, Zalcman G
Third dose of anti-SARS-CoV-2 vaccine for patients with cancer: Should humoral responses be monitored? A position article.
European Journal of Cancer (Oxford, England: 1990) 2022, 162, 182-193.

Barrière J, Zalcman G, Fignon L, Peiffer-Smadja N, Audigier-Valette C, Carles M
Omicron variant: A clear and present danger for patients with cancer.
European Journal of Cancer (Oxford, England: 1990) 2022, 165, 25-26.

Eshagh D, Mageau A, Papo T, Benali K, Sacre K
Persistent FDG uptake in large vessels and risk of relapse in giant cell arteritis.
European Journal of Internal Medicine 2022, 106, 158-160.

Kerioui M, Desmée S, Mercier F, Lin A, Wu B, Jin JY, Shen X, Le Tourneau C, Bruno R, Guedj J
Assessing the impact of organ-specific lesion dynamics on survival in patients with recurrent urothelial carcinoma treated with atezolizumab or chemotherapy.
ESMO open 2022, 7, 100346.

Petersen E, Meroni V, Vasconcelos-Santos DV, Mandelbrot L, Peyron F
Congenital toxoplasmosis: Should we still care about screening?.
Food and Waterborne Parasitology 2022, 27, e00162.

Brun JL, Sentilhes L, Torre A, Huchon C, Garabedian C, Legendre G, Sibiude J, Sénat MV, Marret H, Schmitz T
[CNGOF clinical practice guidelines: Evaluation one year after revision of the methodology].
Gynecologie, Obstetrique, Fertilite & Senologie 2022, 50, 130-135.

Huré M, Peyronnet V, Sibiude J, Cazenave MG, Anselem O, Luton D, Vauloup-Fellous C, Deruelle P, Cordier AG, Benachi A, Mandelbrot L, Couffignal C, Pauphilet V, Vivanti AJ, Picone O
[SARS-Cov-2 vaccine's acceptance among pregnant women-A cross-sectional survey].
Gynecologie, Obstetrique, Fertilite & Senologie 2022, 50, 712-720.

Blot S, Ruppé E, Harbarth S, Asehnoune K, Poulakou G, Luyt CE, Rello J, Klompas M, Depuydt P, Eckmann C, Martin-Loeches I, Povoa P, Bouadma L, Timsit JF, Zahar JR
Healthcare-associated infections in adult intensive care unit patients: Changes in epidemiology, diagnosis, prevention and contributions of new technologies.
Intensive & Critical Care Nursing 2022, 70, 103227.

Eloy P, Laouénan C, Beavogui AH, Keita S, Manchon P, Etard JF, Sissoko D, Mentré F, Malvy D
High doses of favipiravir in two men survivors of Ebola virus disease carrying Ebola virus in semen in Guinea.
IDCases 2022, 27, e01412.

Husain M, Valayer S, Poey N, Rondinaud E, d'Humières C, Visseaux B, Lariven S, Lescure FX, Deconinck L
Pulmonary bacterial infections in adult patients hospitalized for COVID-19 in standard wards.
Infectious Diseases Now 2022, 52, 208-213.

Luong Ngyen LB, Bauer R, Lesieur Z, Galtier F, Duval X, Vanhems P, Lainé F, Tattevin P, Durier C, Launay O, FLUVAC Study group
Vaccine effectiveness against COVID-19 hospitalization in adults in France: A test negative case control study.
Infectious Diseases Now 2022, 52, 40-43.

Saïb A, Bouscaren N, Berçot B, Duchateau A, Miltgen G, Rodet R, Wartel G, Andry F, Iacobelli S, Bertolotti A
Prevalence and risk factors for gonococcal infection in Reunion Island.
Infectious Diseases Now 2022, 52, 149-153.

Landman R, Marcelin AG, Bennani M, Philippe C, Kousignian P, Finkielsztejn L, Roustand L, Nachbaur G, Pourcher V
COPEDOL: A two-year observational study in pretreated HIV-1-infected patients switching to a dolutegravir-based regimen.
Infectious Diseases Now 2022, 52, 93-100.

Koch A, Vermel M, Hansmann Y, Lodi M, Mura C, Sananes A, Gallien S, Wurtz É, Bleibtreu A, Martinot M, Exinger J, Lescure X, Kerneis S, Lacombe K, Mootien JY, Shawali C, Lecointre L, Debry C, Lefebvre N, Sananes N
3D-printed simulator for nasopharyngeal swab collection for COVID-19.
Infectious Diseases Now 2022, S2666-9919(22)00035-5.

Aubry A, Sammarco Rosa P, Chauffour A, Fletcher ML, Cambau E, Avanzi C
Drug resistance in leprosy: An update following 70years of chemotherapy.
Infectious Diseases Now 2022, 52, 243-251.

Grall-Zahar I, Rucly S, Billard-Pomares T, Gasnier-Besnardeau K, Al Mouft O, Zahar JR, Zirnhelt I
Prevalence and risk factors for carriage of extended-spectrum β-lactamase-producing enterobacteriaceae in rehabilitation wards in France.
Infectious Diseases Now 2022, 52, 403-407.

Méchaï F, Bachelet D, Han L, Dubert M, Parisey M, Cordel H, Bourgarit A, Bertrac C, Chauveau S, Billard-Pomares T, Carbonnelle E, Bouchaud O, Yazdanpanah Y, Vignier N, Laouénan C
Tuberculosis treatment outcomes among precarious patients in France.
Infectious Diseases Now 2022, 52, 389-395.

Lemaitre M, Galy A, de Lastours V, Thill P, Tattevin P, Lefort A
The intravenous vancomycin prescription practices of French infectious disease specialists: A cross-sectional observational study.
Infectious Diseases Now 2022, 52, 414-417.

Cohen R, Rybak A, Ouldali N, Angoulvant F, Béchet S, Gajdos V, Hau I, Sellam A, El Aouane El Ghomari I, Elmerich F, Batard C, Auvrignon A, Grimprel E, Favier M, Jung C, Levy C
From the original SARS-CoV-2 strain to the Omicron variant: Predictors of COVID-19 in ambulatory symptomatic children.
Infectious Diseases Now 2022, 52, 432-440.

Pugliese P, Arvieux C, Huleux T, Pialoux G, Vignier N
Proposal of the French HIV Society on the CD4 threshold below which patients living with HIV who wish to be vaccinated against Monkeypox should receive a 3-dose regimen.
Infectious Diseases Now 2022, 52, 459-460.

Saliba R, Lomont A, Eudesson JL, Seytre D, Zahar JR, Pilmis B
Significant variation in the faecal relative abundance of carbapenemase-producing Enterobacteriaceae of colonised patients during hospitalisation: a preliminary study.
International Journal of Antimicrobial Agents 2022, 59, 106479.

Arvaniti K, Dimopoulos G, Antonelli M, Blot K, Creagh-Brown B, Deschepper M, de Lange D, De Waele J, Dikmen Y, Eckmann C, Einav S, Francois G, Fjeldsoee-Nielsen H, Girardis M, Jovanovic B, Lindner M, Koulenti D, Labeau S, Lipman J, Lipovestky F, Makikado LDU, Maseda E, Mikstacki A, Montravers P, Paiva JA, Pereyra C, Rello J, Timsit JF, Tomescu D, Vogelaers D, Blot S, Abdominal Sepsis Study (AbSeS) group on behalf of the Trials Group of the European Society of Intensive Care Medicine
Epidemiology and Age-Related Mortality in Critically Ill Patients With Intra-Abdominal Infection or Sepsis: An International Cohort Study.
International Journal of Antimicrobial Agents 2022, 106591.

Caméléna F, Poncin T, Magnan M, Jacquier H, Merimèche M, Berçot B
Detection of Klebsiella pneumoniae isolates coproducing the plasmid-encoded 16S rRNA methyltransferase RmtF and carbapenemase in Paris, France.
International Journal of Antimicrobial Agents 2022, 60, 106634.

Gueneau R, Joannard B, Haddad N, Alby F, Jullien V, Schlatter J, Cotteret C, Bougnoux ME, Lanternier F, Laroche L, Delliere S, Cisternino S, Lortholary O
Extensive dermatophytosis caused by terbinafine-resistant Trichophyton indotineae, successfully treated with topical voriconazole.
International Journal of Antimicrobial Agents 2022, 60, 106677.

Amarsy R, Trystram D, Cambau E, Monteil C, Fournier S, Oliary J, Junot H, Sabatier P, Porcher R, Robert J, Jarlier V, “la Collégiale de Bactériologie–Virologie–Hygiène de l'Assistance Publique – Hôpitaux de Paris”
Surging bloodstream infections and antimicrobial resistance during the first wave of COVID-19: a study in a large multihospital institution in the Paris region.
International journal of infectious diseases: IJID: official publication of the International Society for Infectious Diseases 2022, 114, 90-96.

Rollin G, Rossi B, Brisse S, Decré D, Leflon-Guibout V, Bert F, Hoffmann I, Decousser JW, Fantin B, Lefort A
Spontaneous and postsurgical/traumatic Klebsiella pneumoniae meningitis: two distinct clinico-microbiological entities.
International journal of infectious diseases: IJID: official publication of the International Society for Infectious Diseases 2022, 114, 185-191.

Bouzid D, Hadad O, Bertine M, Houhou-Fidouh N, Mirand A, Duval X, Bunel V, Borie R, Lucet JC, Descamps D, Visseaux B
Rhinoviruses: molecular diversity and clinical characteristics.
International journal of infectious diseases: IJID: official publication of the International Society for Infectious Diseases 2022, 118, 144-149.

Bachelard A, Sautereau A, Digumber M, Isernia V, Phung B, Lehur AC, Gac SL, Landman R, Yazdanpanah Y, Ghosn J
Risk Factors Associated with Severe/Critical COVID-19 in People Living with HIV-1.
International journal of infectious diseases: IJID: official publication of the International Society for Infectious Diseases 2022, 122, 152-154.

de Lastours V, El Meouche I, Chau F, Beghain J, Chevret D, Aubert-Frambourg A, Clermont O, Royer G, Bouvet O, Denamur E, Fantin B, CIPHARES Group
Evolution of fluoroquinolone-resistant Escherichia coli in the gut after ciprofloxacin treatment.
International journal of medical microbiology: IJMM 2022, 312, 151548.

Eveillard LA, Quartier P, Ouldali N, Bader-Meunier B, Aeschlimann F, Abasq C, Ballot C, Bouric P, Desdoits A, Dumaine C, Galeotti C, Hentgen V, Lefevre-Utile A, Chausset A, Hubiche T, Kupfer-Bessaguet I, Leclerq-Mercier S, Mallet S, Melki I, Merlin E, Miquel J, Piram M, Talmud D, Garcelon N, Vinit C, Welfringer A, Bourrat E, Meinzer U, Groupe de recherche de la Société Française de Dermatologie Pédiatrique (SFDP), Société Francophone pour la rhumatologie et les Maladies Inflammatoires en Pédiatrie (SOFREMIP)
Association of atypical skin manifestations at the onset of systemic juvenile idiopathic arthritis with difficult-to-treat disease: A retrospective multicenter study.
Journal of the American Academy of Dermatology 2022, 87, 1425-1428.

Boussier J, Yatim N, Marchal A, Hadjadj J, Charbit B, El Sissy C, Carlier N, Pène F, Mouthon L, Tharaux PL, Bergeron A, Smadja DM, Rieux-Laucat F, Duffy D, Kernéis S, Frémeaux-Bacchi V, Terrier B
Severe COVID-19 is associated with hyperactivation of the alternative complement pathway.
The Journal of Allergy and Clinical Immunology 2022, 149, 550-556.e2.

Durand C, Chappuis A, Douriez E, Poulain F, Ahmad R, Lescure FX, Peiffer-Smadja N
Perceptions, current practices, and interventions of community pharmacists regarding antimicrobial stewardship: A qualitative study.
Journal of the American Pharmacists Association: JAPhA 2022, S1544-3191(22)00056-5.

Azoulay LD, Pineton de Chambrun M, Larcher R, Pène F, Argaud L, Mayaux J, Jamme M, Coudroy R, Mathian A, Gibelin A, Azoulay E, Tandjaoui-Lambiotte Y, Dargent A, Beloncle F, Raphalen JH, Troger A, de Prost N, Devaquet J, Contou D, Gaugain S, Trouiller P, Grangé S, Ledochowski S, Lemarie J, Faguer S, Degos V, Moyon Q, Luyt CE, Kerneis M, Combes A, Amoura Z
Prevalence, characteristics and outcome of cardiac manifestations in critically-ill antiphospholipid syndrome patients.
Journal of Autoimmunity 2022, 133, 102908.

Hassold N, Saidenberg N, Sigaux J, Lacroix M, Cruaud P, Walewski V, Bouchaud O, Méchaï F
Asymptomatic bacteriuria before biotherapy for rheumatic diseases: Shall we treat?.
Joint Bone Spine 2022, 89, 105327.

Magréault S, Jaureguy F, Zahar JR, Méchaï F, Toinon D, Cohen Y, Carbonnelle E, Jullien V
Automated HPLC-MS/MS assay for the simultaneous determination of ten plasma antibiotic concentrations.
Journal of Chromatography. B, Analytical Technologies in the Biomedical and Life Sciences 2022, 1211, 123496.

Santoro MM, Armenia D, Teyssou E, Santos JR, Charpentier C, Lambert-Niclot S, Antinori A, Katlama C, Descamps D, Perno CF, Calvez V, Paredes R, Ceccherini-Silberstein F, Marcelin AG, LAMRES Study Group
Virological efficacy of switch to DTG plus 3TC in a retrospective observational cohort of suppressed HIV-1 patients with or without past M184V: the LAMRES study.
Journal of Global Antimicrobial Resistance 2022, 31, 52-62.

De Broucker C, Plessier A, Ollivier-Hourmand I, Dharancy S, Bureau C, Cervoni JP, Sogni P, Goria O, Corcos O, Sartoris R, Ronot M, Vilgrain V, de Raucourt E, Zekrini K, Davy H, Durand F, Payancé A, Fidouh-Houhou N, Yazdanpanah Y, Valla D, Rautou PE
Multicenter study on recent portal venous system thrombosis associated with cytomegalovirus disease.
Journal of Hepatology 2022, 76, 115-122.

Saliba R, Karam-Sarkis D, Zahar JR, Glélé LSA
Adverse events associated with patient isolation: a systematic literature review and meta-analysis.
The Journal of Hospital Infection 2022, 119, 54-63.

Nagle S, Tandjaoui-Lambiotte Y, Boubaya M, Athenaïs G, Alloui C, Bloch-Queyrat C, Carbonnelle E, Brichler S, Cohen Y, Zahar JR, Delagrèverie H
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The Journal of Hospital Infection 2022, 126, 116-122.

Le Monnier A, Candela T, Mizrahi A, Bille E, Bourgeois-Nicolaos N, Cattoir V, Farfour E, Grall I, Lecointe D, Limelette A, Marcade G, Poilane I, Poupy P, Kansau I, Zahar JR, Pilmis B, GMC group
One-day prevalence of asymptomatic carriage of toxigenic and non-toxigenic Clostridioides difficile in 10 French hospitals.
The Journal of Hospital Infection 2022, S0195-6701(22)00162-1.

Bidet P, Birgy A, Brethon B, Dalle JH, Mariani-Kurkdjian P, Courroux C, Monjault A, Gits-Muselli M, Bonacorsi S
Epidemiological investigation of Pseudomonas aeruginosa isolates including multidrug-resistant serogroup O12 isolates, by use of a rapid and simplified multiple-locus variable-number of tandem repeats analysis and whole genome sequencing.
The Journal of Hospital Infection 2022, 130, 56-62.

Cosentino G, Bernard M, Ambroise J, Giannoli JM, Guedj J, Débarre F, Blanquart F
SARS-CoV-2 viral dynamics in infections with Alpha and Beta variants of concern in the French community.
The Journal of Infection 2022, 84, 94-118.

Ferré VM, Lebourgeois S, Menidjel R, Collin G, Chenane HR, Guindi MO, Yazdanpanah Y, Timsit JF, Charpentier C, Descamps D, Fidouh N, Visseaux B
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The Journal of Infection 2022, 84, 248-288.

Lebourgeois S, Menidjel R, Chenane HR, Ferré VM, Collin G, Damond F, Coppée R, Yazdanpanah Y, Timsit JF, Houhou-Fidouh N, Descamps D, Charpentier C, Visseaux B
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The Journal of Infection 2022, 84, 418-467.

Moby V, Millot S, Erpelding ML, Euvrard E, Bourgeois G, Martin-Thomé H, Chirouze C, Tattevin P, Strady C, Agrinier N, Alla F, Iung B, Selton-Suty C, Hoen B, Duval X, EI-dents Association pour lȉEtude et la Prévention de l’Endocardite Infectieuse (AEPEI) Study Group
Poor oral health and hygiene habits in patients with infective endocarditis and previously identified predisposing cardiac condition: A prospective cohort study.
The Journal of Infection 2022, 84, e58-e61.

Ferré VM, Lebourgeois S, Chenane HR, Menidjel R, Masson C, Collin G, Visseaux B, Descamps D, Fidouh N, Charpentier C
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The Journal of Infection 2022, S0163-4453(22)00126-8.

Bachir M, Guglielmetti L, Tunesi S, Billard-Pomares T, Chiesi S, Jaffré J, Langris H, Pourcher V, Schramm F, Lemaître N, Robert J, Isoniazid Resistance Group
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The Journal of Infection 2022, 85, 24-30.

Martin-Blondel G, Marcelin AG, Soulié C, Kaisaridi S, Lusivika-Nzinga C, Dorival C, Nailler L, Boston A, Melenotte C, Cabié A, Choquet C, Coustillères F, Martellosio JP, Gaube G, Trinh-Duc A, Ronchetti AM, Pourcher V, Chauveau M, Lacombe K, Peiffer-Smadja N, Housset P, Perrot A, Pialoux G, Martin A, Dubee V, Devaux M, Frey J, Cazanave C, Liblau R, Carrat F, Yordanov Y
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The Journal of Infection 2022, 85, e104-e108.

Wehbe K, Pencole L, Lhuaire M, Sibiude J, Mandelbrot L, Villena I, Picone O
Hygiene measures as primary prevention of toxoplasmosis during pregnancy: A systematic review.
Journal of Gynecology Obstetrics and Human Reproduction 2022, 51, 102300.

Payet L, Peyronnet V, Thouny C, Coffin B, Ceccaldi PF, M'Barek IB, Treton X, Letendre I, Mandelbrot L
Impact of Crohn's disease on obstetrical management.
Journal of Gynecology Obstetrics and Human Reproduction 2022, 51, 102480.

Aubart M, Roux CJ, Durrleman C, Gins C, Hully M, Kossorotoff M, Gitiaux C, Levy R, Moulin F, Debray A, Belhadjer Z, Georget E, Kom T, Blanc P, Wehbi S, Mazeghrane M, Tencer J, Gajdos V, Rouget S, De Pontual L, Basmaci R, Yacouben K, Angoulvant F, Leruez-Ville M, Sterlin D, Rozenberg F, Robert MP, Zhang SY, Boddaert N, Desguerre I
Neuroinflammatory Disease following Severe Acute Respiratory Syndrome Coronavirus 2 Infection in Children.
The Journal of Pediatrics 2022, 247, 22-28.e2.

Gounant V, Ferré VM, Soussi G, Charpentier C, Flament H, Fidouh N, Collin G, Namour C, Assoun S, Bizot A, Brouk Z, Vicaut E, Teixeira L, Descamps D, Zalcman G
Efficacy of Severe Acute Respiratory Syndrome Coronavirus-2 Vaccine in Patients With Thoracic Cancer: A Prospective Study Supporting a Third Dose in Patients With Minimal Serologic Response After Two Vaccine Doses.
Journal of Thoracic Oncology: Official Publication of the International Association for the Study of Lung Cancer 2022, 17, 239-251.

Farrar DS, Drouin O, Moore Hepburn C, Baerg K, Chan K, Cyr C, Donner EJ, Embree JE, Farrell C, Forgie S, Giroux R, Kang KT, King M, Laffin Thibodeau M, Orkin J, Ouldali N, Papenburg J, Pound CM, Price VE, Proulx-Gauthier JP, Purewal R, Ricci C, Sadarangani M, Salvadori MI, Thibeault R, Top KA, Viel-Thériault I, Kakkar F, Morris SK
Risk factors for severe COVID-19 in hospitalized children in Canada: A national prospective study from March 2020-May 2021.
Lancet Regional Health. Americas 2022, 15, 100337.

Alidjinou EK, Demaret J, Corroyer-Simovic B, Labreuche J, Goffard A, Trauet J, Lupau D, Miczek S, Vuotto F, Dendooven A, Huvent-Grelle D, Podvin J, Dreuil D, Faure K, Deplanque D, Bocket L, Duhamel A, Sobaszek A, Hober D, Hisbergues M, Puisieux F, Autran B, Yazdanpanah Y, Labalette M, Lefèvre G
Immunogenicity of BNT162b2 vaccine booster against SARS-CoV-2 Delta and Omicron variants in nursing home residents: A prospective observational study in older adults aged from 68 to 98 years.
The Lancet Regional Health. Europe 2022, 17, 100385.

Ouldali N, Bagheri H, Salvo F, Antona D, Pariente A, Leblanc C, Tebacher M, Micallef J, Levy C, Cohen R, Javouhey E, Bader-Meunier B, Ovaert C, Renolleau S, Hentgen V, Kone-Paut I, Deschamps N, De Pontual L, Iriart X, Guen CGL, Angoulvant F, Belot A, “French Covid-19 Paediatric Inflammation Consortium”£ and the “French Pharmacovigilance network”*
Hyper inflammatory syndrome following COVID-19 mRNA vaccine in children: A national post-authorization pharmacovigilance study.
The Lancet Regional Health. Europe 2022, 17, 100393.

Tacconelli E, Gorska A, Carrara E, Davis RJ, Bonten M, Friedrich AW, Glasner C, Goossens H, Hasenauer J, Abad JMH, Peñalvo JL, Sanchez-Niubo A, Sialm A, Scipione G, Soriano G, Yazdanpanah Y, Vorstenbosch E, Jaenisch T
Challenges of data sharing in European Covid-19 projects: A learning opportunity for advancing pandemic preparedness and response.
The Lancet Regional Health. Europe 2022, 21, 100467.

Ouldali N, Bagheri H, Salvo F, Antona D, Pariente A, Leblanc C, Tebacher M, Micallef J, Levy C, Cohen R, Javouhey E, Bader-Meunier B, Ovaert C, Renolleau S, Hentgen V, Kone-Paut I, Deschamps N, De Pontual L, Iriart X, Guen CGL, Angoulvant F, Belot A, French Covid-19 Paediatric Inflammation Consortium, French Pharmacovigilance network
Correction to "Hyper inflammatory syndrome following COVID-19 mRNA vaccine in children: A national post-authorization pharmacovigilance study".
The Lancet Regional Health. Europe 2022, 21, 100468.

Ouldali N, Dellepiane RM, Torreggiani S, Mauri L, Beaujour G, Beyler C, Cucchetti M, Dumaine C, La Vecchia A, Melki I, Stracquadaino R, Vinit C, Cimaz R, Meinzer U
Development of a score for early identification of children with Kawasaki disease requiring second-line treatment in multi-ethnic populations in Europe: A multicentre retrospective cohort study.
The Lancet Regional Health. Europe 2022, 22, 100481.

Cohen PR, Rybak A, Werner A, Béchet S, Desandes R, Hassid F, André JM, Gelbert N, Thiebault G, Kochert F, Cahn-Sellem F, Vié Le Sage F, Angoulvant PF, Ouldali N, Frandji B, Levy C
Trends in pediatric ambulatory community acquired infections before and during COVID-19 pandemic: A prospective multicentric surveillance study in France.
The Lancet Regional Health. Europe 2022, 22, 100497.

Sonneville R, Jaquet P, Vellieux G, de Montmollin E, Visseaux B
Intensive care management of patients with viral encephalitis.
Revue Neurologique 2022, 178, 48-56.

Debray MP, Carette MF, Loubet P, Pasquet B, Houhou Fidouh N, Benjoar M, Varon E, Brun AL, Claessens YE, Duval X, Khalil A, ESCAPED study group
CT features of community-acquired pneumonia at the emergency department.
Respiratory Medicine and Research 2022, 81, 100892.

Perisse E, Mageau A, Brandberg Y, Gardeur L, Gresteau V, Mroz A, Reversat M, Roullier E, Stojicic D, Belmir L, Leblanc C, Goulenok T, de Lastours V, Teixeira M, Moins-Teisserenc H, Sacré K, DUSIR Paris Nord
[Attitude and beliefs of healthcare workers toward influenza vaccination in Internal Medicine: A cross-sectional survey].
La Revue De Medecine Interne 2022, 43, 342-346.

Guiraud V, Verney C, Tetelboum N, Argy N, Debus J, Herbel S, Thy M, Ricard JD, Roux D, Zucman N
Life-threatening hemophagocytic syndrome triggered by disseminated toxoplasmosis in a young patient with previously unknown AIDS.
La Revue De Medecine Interne 2022, 43, 622-625.

Wurtzer S, Waldman P, Levert M, Cluzel N, Almayrac JL, Charpentier C, Masnada S, Gillon-Ritz M, Mouchel JM, Maday Y, Boni M, OBEPINE Consortium, AP-HP Virologist Group, Marechal V, Moulin L
SARS-CoV-2 genome quantification in wastewaters at regional and city scale allows precise monitoring of the whole outbreaks dynamics and variants spreading in the population.
The Science of the Total Environment 2022, 810, 152213.

Fromentin M, Mullaert J, Gille B, Tchalla A, Lavollay M, Boyer-Besseyre M, Gauzit R, Ricard JD, Gaujoux S, Baillard C
Extended antibiotic prophylaxis after pancreatoduodenectomy reduces postoperative abdominal infection in high-risk patients: Results from a retrospective cohort study.
Surgery 2022, 172, 205-211.

Deplanque D, Cviklinski S, Bardou M, Ader F, Blanchard H, Barthélémy P, David I, D'Ortenzio E, Espérou H, Launay O, Lazarevic M, Lechat P, Lethiec F, Levy Y, Pérol D, Rage V, Roustit M, Thabut G
Health crisis: What opportunities for clinical drug research?.
Therapie 2022, 77, 59-67.

Cortier M, de La Porte C, Papot E, Goudjo A, Guenneau L, Riou F, Cervantes-Gonzalez M, Prioux M, Yazdanpanah Y, Galy A
Health status and healthcare trajectory of vulnerable asylum seekers hosted in a French Reception Center.
Travel Medicine and Infectious Disease 2022, 46, 102180.

Schmitz T, Doret-Dion M, Sentilhes L, Parant O, Claris O, Renesme L, Abbal J, Girault A, Torchin H, Houllier M, Le Saché N, Vivanti AJ, De Luca D, Winer N, Flamant C, Thuillier C, Boileau P, Blanc J, Brevaut V, Bouet PE, Gascoin G, Beucher G, Datin-Dorriere V, Bounan S, Bolot P, Poncelet C, Alberti C, Ursino M, Aupiais C, Baud O, BETADOSE trial study group, Groupe de Recherche en Obstétrique et Gynécologie
Neonatal outcomes for women at risk of preterm delivery given half dose versus full dose of antenatal betamethasone: a randomised, multicentre, double-blind, placebo-controlled, non-inferiority trial.
Lancet (London, England) 2022, 400, 592-604.

Burdet C, Ader F
Real-world effectiveness of oral antivirals for COVID-19.
Lancet (London, England) 2022, 400, 1175-1176.

Thornhill JP, Palich R, Ghosn J, Walmsley S, Moschese D, Cortes CP, Galliez RM, Garlin AB, Nozza S, Mitja O, Radix AE, Blanco JL, Crabtree-Ramirez B, Thompson M, Wiese L, Schulbin H, Levcovich A, Falcone M, Lucchini A, Sendagorta E, Treutiger CJ, Byrne R, Coyne K, Meyerowitz EA, Grahn AM, Hansen ABE, Pourcher V, DellaPiazza M, Lee R, Stoeckle M, Hazra A, Apea V, Rubenstein E, Jones J, Wilkin A, Ganesan A, Henao-Martínez AF, Chow EJ, Titanji BK, Zucker JE, Ogoina D, Orkin CM, Share-Net writing group
Human monkeypox virus infection in women and non-binary individuals during the 2022 outbreaks: a global case series.
Lancet (London, England) 2022, 400, 1953-1965.

Ader F, Bouscambert-Duchamp M, Hites M, Peiffer-Smadja N, Poissy J, Belhadi D, Diallo A, Lê MP, Peytavin G, Staub T, Greil R, Guedj J, Paiva JA, Costagliola D, Yazdanpanah Y, Burdet C, Mentré F, DisCoVeRy Study Group
Remdesivir plus standard of care versus standard of care alone for the treatment of patients admitted to hospital with COVID-19 (DisCoVeRy): a phase 3, randomised, controlled, open-label trial.
The Lancet. Infectious Diseases 2022, 22, 209-221.

Lange C, Böttger EC, Cambau E, Griffith DE, Guglielmetti L, van Ingen J, Knight SL, Marras TK, Olivier KN, Santin M, Stout JE, Tortoli E, Wagner D, Winthrop K, Daley CL, expert panel group for management recommendations in non-tuberculous mycobacterial pulmonary diseases
Consensus management recommendations for less common non-tuberculous mycobacterial pulmonary diseases.
The Lancet. Infectious Diseases 2022, 22, e178-e190.

Nasa P, Azoulay E, Chakrabarti A, Divatia JV, Jain R, Rodrigues C, Rosenthal VD, Alhazzani W, Arabi YM, Bakker J, Bassetti M, De Waele J, Dimopoulos G, Du B, Einav S, Evans L, Finfer S, Guérin C, Hammond NE, Jaber S, Kleinpell RM, Koh Y, Kollef M, Levy MM, Machado FR, Mancebo J, Martin-Loeches I, Mer M, Niederman MS, Pelosi P, Perner A, Peter JV, Phua J, Piquilloud L, Pletz MW, Rhodes A, Schultz MJ, Singer M, Timsit JF, Venkatesh B, Vincent JL, Welte T, Myatra SN
Infection control in the intensive care unit: expert consensus statements for SARS-CoV-2 using a Delphi method.
The Lancet. Infectious Diseases 2022, 22, e74-e87.

Delaugerre C, Foissac F, Abdoul H, Masson G, Choupeaux L, Dufour E, Gastli N, Delarue SM, Néré ML, Minier M, Gabassi A, Salmona M, Seguineau M, Schmitt S, Tonglet S, Olivier A, Poyart C, Le Goff J, Lescure X, Kernéis S, Tréluyer JM, SPRING study group
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The Lancet. Infectious Diseases 2022, 22, 341-348.

Colosi E, Bassignana G, Contreras DA, Poirier C, Boëlle PY, Cauchemez S, Yazdanpanah Y, Lina B, Fontanet A, Barrat A, Colizza V
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The Lancet. Infectious Diseases 2022, S1473-3099(22)00138-4.

Ader F, Bouscambert-Duchamp M, Hites M, Peiffer-Smadja N, Mentré F, Burdet C, DisCoVeRy Study Group
Final results of the DisCoVeRy trial of remdesivir for patients admitted to hospital with COVID-19.
The Lancet. Infectious Diseases 2022, 22, 764-765.

Hentzien M, Autran B, Piroth L, Yazdanpanah Y, Calmy A
A monoclonal antibody stands out against omicron subvariants: a call to action for a wider access to bebtelovimab.
The Lancet. Infectious Diseases 2022, S1473-3099(22)00495-9.

Gangneux JP, Dannaoui E, Fekkar A, Luyt CE, Botterel F, De Prost N, Tadié JM, Reizine F, Houzé S, Timsit JF, Iriart X, Riu-Poulenc B, Sendid B, Nseir S, Persat F, Wallet F, Le Pape P, Canet E, Novara A, Manai M, Cateau E, Thille AW, Brun S, Cohen Y, Alanio A, Mégarbane B, Cornet M, Terzi N, Lamhaut L, Sabourin E, Desoubeaux G, Ehrmann S, Hennequin C, Voiriot G, Nevez G, Aubron C, Letscher-Bru V, Meziani F, Blaize M, Mayaux J, Monsel A, Boquel F, Robert-Gangneux F, Le Tulzo Y, Seguin P, Guegan H, Autier B, Lesouhaitier M, Pelletier R, Belaz S, Bonnal C, Berry A, Leroy J, François N, Richard JC, Paulus S, Argaud L, Dupont D, Menotti J, Morio F, Soulié M, Schwebel C, Garnaud C, Guitard J, Le Gal S, Quinio D, Morcet J, Laviolle B, Zahar JR, Bougnoux ME
Fungal infections in mechanically ventilated patients with COVID-19 during the first wave: the French multicentre MYCOVID study.
The Lancet. Respiratory Medicine 2022, 10, 180-190.

Gangneux JP, Morcet J, Laviolle B, Dannaoui E, Timsit JF, Ruckly S, Zahar JR, Bougnoux ME
Time-dependent bias when analysing COVID-19-associated pulmonary aspergillosis - Authors' reply.
The Lancet. Respiratory Medicine 2022, 10, e27.

Dudoignon E, Coutrot M, Camelena F, Leone M, Dépret F
Multiplex bacterial PCR for antibiotic stewardship in pneumonia.
The Lancet. Respiratory Medicine 2022, 10, e78.

Landman R, de Truchis P, Assoumou L, Lambert S, Bellet J, Amat K, Lefebvre B, Allavena C, Katlama C, Yazdanpanah Y, Molina JM, Petrov-Sanchez V, Gibowski S, Alvarez JC, Leibowitch J, Capeau J, Fellahi S, Duracinsky M, Morand-Joubert L, Costagliola D, Alvarez JC, Girard PM, ANRS 170 QUATUOR study group
A 4-days-on and 3-days-off maintenance treatment strategy for adults with HIV-1 (ANRS 170 QUATUOR): a randomised, open-label, multicentre, parallel, non-inferiority trial.
The lancet. HIV 2022, 9, e79-e90.

Molina JM, Ghosn J, Assoumou L, Delaugerre C, Algarte-Genin M, Pialoux G, Katlama C, Slama L, Liegeon G, Beniguel L, Ohayon M, Mouhim H, Goldwirt L, Spire B, Loze B, Surgers L, Pavie J, Lourenco J, Ben-Mechlia M, Le Mestre S, Rojas-Castro D, Costagliola D, ANRS PREVENIR Study Group
Daily and on-demand HIV pre-exposure prophylaxis with emtricitabine and tenofovir disoproxil (ANRS PREVENIR): a prospective observational cohort study.
The lancet. HIV 2022, 9, e554-e562.

Schramm B, Temfack E, Descamps D, Nicholas S, Peytavin G, Bitilinyu-Bangoh JE, Storto A, Lê MP, Abdi B, Ousley J, Kalua T, Calvez V, Jahn A, Marcelin AG, Szumilin E
Viral suppression and HIV-1 drug resistance 1 year after pragmatic transitioning to dolutegravir first-line therapy in Malawi: a prospective cohort study.
The lancet. HIV 2022, 9, e544-e553.

CORIMUNO-19 Collaborative group
Sarilumab in adults hospitalised with moderate-to-severe COVID-19 pneumonia (CORIMUNO-SARI-1): An open-label randomised controlled trial.
The Lancet. Rheumatology 2022, 4, e24-e32.

Goulenok T, Delaval L, Delory N, François C, Papo T, Descamps D, Ferré VM, Sacré K
Pre-exposure anti-SARS-CoV-2 monoclonal antibodies in severely immunocompromised patients with immune-mediated inflammatory diseases.
The Lancet. Rheumatology 2022, 4, e458-e461.

Thielebein A, Ighodalo Y, Taju A, Olokor T, Omiunu R, Esumeh R, Ebhodaghe P, Ekanem A, Igenegbale G, Giwa R, Renevey A, Hinzmann J, Müller J, Pallasch E, Pahlmann M, Guedj J, Nwatuzor J, Femi Babatunde O, Adomeh DI, Asogun D, Akpede N, Okogbenin S, Günther S, Oestereich L, Duraffour S, Ogbaini-Emovon E
Virus persistence after recovery from acute Lassa fever in Nigeria: a 2-year interim analysis of a prospective longitudinal cohort study.
The Lancet. Microbe 2022, 3, e32-e40.

Sánchez-Busó L, Cole MJ, Spiteri G, Day M, Jacobsson S, Golparian D, Sajedi N, Yeats CA, Abudahab K, Underwood A, Bluemel B, Aanensen DM, Unemo M
Europe-wide expansion and eradication of multidrug-resistant Neisseria gonorrhoeae lineages: a genomic surveillance study..
The Lancet. Microbe 2022, 3, e452-e463.

Marijke Braet S, Jouet A, Aubry A, Van Dyck-Lippens M, Lenoir E, Assoumani Y, Baco A, Mzembaba A, Cambau E, Vasconcellos SEG, Rigouts L, Suffys PN, Hasker E, Supply P, de Jong BC
Investigating drug resistance of Mycobacterium leprae in the Comoros: an observational deep-sequencing study.
The Lancet. Microbe 2022, 3, e693-e700.

Casalino E, Bouzid D, Ben Hammouda A, Wargon M, Curac S, Hellmann R, Choquet C, Ghazali DA
COVID-19 Preparedness Among Emergency Departments: A Cross-Sectional Study in France.
Disaster Medicine and Public Health Preparedness 2022, 16, 245-253.

Guyeux C, Senelle G, Refrégier G, Bretelle-Establet F, Cambau E, Sola C
Connection between two historical tuberculosis outbreak sites in Japan, Honshu, by a new ancestral Mycobacterium tuberculosis L2 sublineage.
Epidemiology and Infection 2022, 1-25.

Pavlovsky T, Obadia M, Ragot S, Douay B, Casalino E, Ghazali DA
Predictors of Risk Stratification and Value of Point-of-Care of High-Sensitivity Cardiac Troponin-I in EMS Management of Non-ST-Segment Elevation Myocardial Infarction: A Retrospective Study.
Prehospital and Disaster Medicine 2022, 37, 365-372.

Luong Nguyen LB, Ghosn J, Durier C, Tachot C, Tartour E, Touati A, Simon T, Autran B, Ortega Perez I, Telford E, Ward JK, Michels D, Meyer L, Rousseau A, Berard L, de Lamballerie X, Launay O
A prospective national cohort evaluating ring MVA vaccination as post-exposure prophylaxis for monkeypox.
Nature Medicine 2022, 28, 1983-1984.

Smith DRM, Duval A, Zahar JR, EMAE-MESuRS Working Group on Nosocomial SARS-CoV-2 Modelling, Opatowski L, Temime L
Rapid antigen testing as a reactive response to surges in nosocomial SARS-CoV-2 outbreak risk.
Nature Communications 2022, 13, 236.

Tesson F, Hervé A, Mordret E, Touchon M, d'Humières C, Cury J, Bernheim A
Systematic and quantitative view of the antiviral arsenal of prokaryotes.
Nature Communications 2022, 13, 2561.

Bertaux F, Sosa-Carrillo S, Gross V, Fraisse A, Aditya C, Furstenheim M, Batt G
Enhancing bioreactor arrays for automated measurements and reactive control with ReacSight.
Nature Communications 2022, 13, 3363.

Vigué L, Croce G, Petitjean M, Ruppé E, Tenaillon O, Weigt M
Deciphering polymorphism in 61,157 Escherichia coli genomes via epistatic sequence landscapes.
Nature Communications 2022, 13, 4030.

Marlin R, Desjardins D, Contreras V, Lingas G, Solas C, Roques P, Naninck T, Pascal Q, Behillil S, Maisonnasse P, Lemaitre J, Kahlaoui N, Delache B, Pizzorno A, Nougairede A, Ludot C, Terrier O, Dereuddre-Bosquet N, Relouzat F, Chapon C, Ho Tsong Fang R, van der Werf S, Rosa Calatrava M, Malvy D, de Lamballerie X, Guedj J, Le Grand R
Antiviral efficacy of favipiravir against Zika and SARS-CoV-2 viruses in non-human primates.
Nature Communications 2022, 13, 5108.

de Prost N, Audureau E, Heming N, Gault E, Pham T, Chaghouri A, de Montmollin N, Voiriot G, Morand-Joubert L, Joseph A, Chaix ML, Préau S, Favory R, Guigon A, Luyt CE, Burrel S, Mayaux J, Marot S, Roux D, Descamps D, Meireles S, Pène F, Rozenberg F, Contou D, Henry A, Gaudry S, Brichler S, Timsit JF, Kimmoun A, Hartard C, Jandeaux LM, Fafi-Kremer S, Gabarre P, Emery M, Garcia-Sanchez C, Jochmans S, Pitsch A, Annane D, Azoulay E, Mekontso Dessap A, Rodriguez C, Pawlotsky JM, Fourati S
Clinical phenotypes and outcomes associated with SARS-CoV-2 variant Omicron in critically ill French patients with COVID-19.
Nature Communications 2022, 13, 6025.

Smith N, Possémé C, Bondet V, Sugrue J, Townsend L, Charbit B, Rouilly V, Saint-André V, Dott T, Pozo AR, Yatim N, Schwartz O, Cervantes-Gonzalez M, Ghosn J, Bastard P, Casanova JL, Szwebel TA, Terrier B, Conlon N, O'Farrelly C, Cheallaigh CN, Bourke NM, Duffy D
Defective activation and regulation of type I interferon immunity is associated with increasing COVID-19 severity.
Nature Communications 2022, 13, 7254.

Piel D, Bruto M, Labreuche Y, Blanquart F, Goudenège D, Barcia-Cruz R, Chenivesse S, Le Panse S, James A, Dubert J, Petton B, Lieberman E, Wegner KM, Hussain FA, Kauffman KM, Polz MF, Bikard D, Gandon S, Rocha EPC, Le Roux F
Phage-host coevolution in natural populations.
Nature Microbiology 2022, 7, 1075-1086.

Cox N, Young BE, Bowles P, Fernandez M, Marin J, Rapacciuolo G, Böhm M, Brooks TM, Hedges SB, Hilton-Taylor C, Hoffmann M, Jenkins RKB, Tognelli MF, Alexander GJ, Allison A, Ananjeva NB, Auliya M, Avila LJ, Chapple DG, Cisneros-Heredia DF, Cogger HG, Colli GR, de Silva A, Eisemberg CC, Els J, Fong G A, Grant TD, Hitchmough RA, Iskandar DT, Kidera N, Martins M, Meiri S, Mitchell NJ, Molur S, Nogueira CdC, Ortiz JC, Penner J, Rhodin AGJ, Rivas GA, Rödel MO, Roll U, Sanders KL, Santos-Barrera G, Shea GM, Spawls S, Stuart BL, Tolley KA, Trape JF, Vidal MA, Wagner P, Wallace BP, Xie Y
A global reptile assessment highlights shared conservation needs of tetrapods.
Nature 2022, 605, 285-290.

ISARIC Clinical Characterization Group, Garcia-Gallo E, Merson L, Kennon K, Kelly S, Citarella BW, Fryer DV, Shrapnel S, Lee J, Duque S, Fuentes YV, Balan V, Smith S, Wei J, Gonçalves BP, Russell CD, Sigfrid L, Dagens A, Olliaro PL, Baruch J, Kartsonaki C, Dunning J, Rojek A, Rashan A, Beane A, Murthy S, Reyes LF
ISARIC-COVID-19 dataset: A Prospective, Standardized, Global Dataset of Patients Hospitalized with COVID-19.
Scientific Data 2022, 9, 454.

Peyneau M, Granger V, Wicky PH, Khelifi-Touhami D, Timsit JF, Lescure FX, Yazdanpanah Y, Tran-Dinh A, Montravers P, Monteiro RC, Chollet-Martin S, Hurtado-Nedelec M, de Chaisemartin L
Innate immune deficiencies are associated with severity and poor prognosis in patients with COVID-19.
Scientific Reports 2022, 12, 638.

Leducq V, Jary A, Bridier-Nahmias A, Daniel L, Zafilaza K, Damond F, Goldstein V, Duval A, Blanquart F, Calvez V, Descamps D, Marcelin AG, Visseaux B
Nosocomial transmission clusters and lineage diversity characterized by SARS-CoV-2 genomes from two large hospitals in Paris, France, in 2020.
Scientific Reports 2022, 12, 1094.

Luque-Paz D, Tattevin P, Loubet P, Bénézit F, Thibault V, Lainé F, Vanhems P, Amour S, Lina B, Duval X, L'Honneur AS, Fidouh N, Vallejo C, Alain S, Galtier F, Foulongne V, Lagathu G, Lenzi N, Lesieur Z, Launay O, Jouneau S, FLUVAC Study Group
Chronic use of inhaled corticosteroids in patients admitted for respiratory virus infections: a 6-year prospective multicenter study.
Scientific Reports 2022, 12, 4199.

da Cunha MF, Pranke I, Sassi A, Schreiweis C, Moriceau S, Vidovic D, Hatton A, Carlon MS, Creste G, Berhal F, Prestat G, Freund R, Odolczyk N, Jais JP, Gravier-Pelletier C, Zielenkiewicz P, Jullien V, Hinzpeter A, Oury F, Edelman A, Sermet-Gaudelus I
Systemic bis-phosphinic acid derivative restores chloride transport in Cystic Fibrosis mice.
Scientific Reports 2022, 12, 6132.

Hausfater P, Boutolleau D, Lacombe K, Beurton A, Dumont M, Constantin JM, Ghosn J, Combes A, Cury N, Guedj R, Djibré M, Bompard R, Mazerand S, Pourcher V, Gimeno L, Marois C, Teyssou E, Marcelin AG, Hajage D, Tubach F
Cumulative incidence of SARS-CoV-2 infection and associated risk factors among frontline health care workers in Paris: the SEROCOV cohort study.
Scientific Reports 2022, 12, 7211.

Beydon M, Nicaise-Roland P, Mageau A, Farkh C, Daugas E, Descamps V, Dieude P, Dossier A, Goulenok T, Farhi F, Mutuon P, Timsit JF, Papo T, Sacre K
Autoantibodies against IFNα in patients with systemic lupus erythematosus and susceptibility for infection: a retrospective case-control study.
Scientific Reports 2022, 12, 11244.

Long GS, Klunk J, Duggan AT, Tapson M, Giuffra V, Gazzè L, Fornaciari A, Duchene S, Fornaciari G, Clermont O, Denamur E, Golding GB, Poinar H
A 16th century Escherichia coli draft genome associated with an opportunistic bile infection.
Communications Biology 2022, 5, 599.

Tenaillon O, Matic I
L’impact des mutations neutres sur l’évolvabilité et l’évolution des génomes.
Medecine Sciences: M/S 2022, 38, 777-785.

Wicky PH, Martin-Loeches I, Timsit JF
HAP and VAP after Guidelines.
Seminars in Respiratory and Critical Care Medicine 2022, 43, 248-254.

Thy M, Peiffer-Smadja N, Mailhe M, Kramer L, Ferré VM, Houhou N, Tarhini H, Bertin C, Beaumont AL, Garé M, Le Pluart D, Perrineau S, Rahi M, Deconinck L, Phung B, Mollo B, Cortier M, Cresta M, De La Porte Des Vaux C, Joly V, Lariven S, Rioux C, Somarriba C, Lescure FX, Charpentier C, Yazdanpanah Y, Ghosn J
Breakthrough Infections after Postexposure Vaccination against Mpox.
The New England Journal of Medicine 2022, 387, 2477-2479.

PREVAC Study Team, Kieh M, Richert L, Beavogui AH, Grund B, Leigh B, D'Ortenzio E, Doumbia S, Lhomme E, Sow S, Vatrinet R, Roy C, Kennedy SB, Faye S, Lees S, Millimouno NP, Camara AM, Samai M, Deen GF, Doumbia M, Espérou H, Pierson J, Watson-Jones D, Diallo A, Wentworth D, McLean C, Simon J, Wiedemann A, Dighero-Kemp B, Hensley L, Lane HC, Levy Y, Piot P, Greenwood B, Chêne G, Neaton J, Yazdanpanah Y
Randomized Trial of Vaccines for Zaire Ebola Virus Disease.
The New England Journal of Medicine 2022, 387, 2411-2424.

Gessain A, Nakoune E, Yazdanpanah Y
Monkeypox.
The New England Journal of Medicine 2022, 387, 1783-1793.

Amor DR, Gore J
Fast growth can counteract antibiotic susceptibility in shaping microbial community resilience to antibiotics.
Proceedings of the National Academy of Sciences of the United States of America 2022, 119, e2116954119.

Manry J, Bastard P, Gervais A, Le Voyer T, Rosain J, Philippot Q, Michailidis E, Hoffmann HH, Eto S, Garcia-Prat M, Bizien L, Parra-Martínez A, Yang R, Haljasmägi L, Migaud M, Särekannu K, Maslovskaja J, de Prost N, Tandjaoui-Lambiotte Y, Luyt CE, Amador-Borrero B, Gaudet A, Poissy J, Morel P, Richard P, Cognasse F, Troya J, Trouillet-Assant S, Belot A, Saker K, Garçon P, Rivière JG, Lagier JC, Gentile S, Rosen LB, Shaw E, Morio T, Tanaka J, Dalmau D, Tharaux PL, Sene D, Stepanian A, Mégarbane B, Triantafyllia V, Fekkar A, Heath JR, Franco JL, Anaya JM, Solé-Violán J, Imberti L, Biondi A, Bonfanti P, Castagnoli R, Delmonte OM, Zhang Y, Snow AL, Holland SM, Biggs CM, Moncada-Vélez M, Arias AA, Lorenzo L, Boucherit S, Anglicheau D, Planas AM, Haerynck F, Duvlis S, Ozcelik T, Keles S, Bousfiha AA, El Bakkouri J, Ramirez-Santana C, Paul S, Pan-Hammarström Q, Hammarström L, Dupont A, Kurolap A, Metz CN, Aiuti A, Casari G, Lampasona V, Ciceri F, Barreiros LA, Dominguez-Garrido E, Vidigal M, Zatz M, van de Beek D, Sahanic S, Tancevski I, Stepanovskyy Y, Boyarchuk O, Nukui Y, Tsumura M, Vidaur L, Tangye SG, Burrel S, Duffy D, Quintana-Murci L, Klocperk A, Kann NY, Shcherbina A, Lau YL, Leung D, Coulongeat M, Marlet J, Koning R, Reyes LF, Chauvineau-Grenier A, Venet F, Monneret G, Nussenzweig MC, Arrestier R, Boudhabhay I, Baris-Feldman H, Hagin D, Wauters J, Meyts I, Dyer AH, Kennelly SP, Bourke NM, Halwani R, Sharif-Askari FS, Dorgham K, Sallette J, Sedkaoui SM, AlKhater S, Rigo-Bonnin R, Morandeira F, Roussel L, Vinh DC, Erikstrup C, Condino-Neto A, Prando C, Bondarenko A, Spaan AN, Gilardin L, Fellay J, Lyonnet S, Bilguvar K, Lifton RP, Mane S, HGID Lab, COVID Clinicians, COVID-STORM Clinicians, NIAID Immune Response to COVID Group, NH-COVAIR Study Group, Danish CHGE, Danish Blood Donor Study, St. James's Hospital, SARS CoV2 Interest Group, French COVID Cohort Study Group, Imagine COVID-Group, Milieu Intérieur Consortium, CoV-Contact Cohort, Amsterdam UMC Covid-19 Biobank Investigators, COVID Human Genetic Effort, CP-COVID-19 Group, CONSTANCES cohort, 3C-Dijon Study, Cerba Health-Care, Etablissement Français du Sang Study group, Anderson MS, Boisson B, Béziat V, Zhang SY, Andreakos E, Hermine O, Pujol A, Peterson P, Mogensen TH, Rowen L, Mond J, Debette S, de Lamballerie X, Burdet C, Bouadma L, Zins M, Soler-Palacin P, Colobran R, Gorochov G, Solanich X, Susen S, Martinez-Picado J, Raoult D, Vasse M, Gregersen PK, Piemonti L, Rodríguez-Gallego C, Notarangelo LD, Su HC, Kisand K, Okada S, Puel A, Jouanguy E, Rice CM, Tiberghien P, Zhang Q, Casanova JL, Abel L, Cobat A
The risk of COVID-19 death is much greater and age dependent with type I IFN autoantibodies.
Proceedings of the National Academy of Sciences of the United States of America 2022, 119, e2200413119.

Fromentin M, Bridier-Nahmias A, Legoff J, Mercier-Delarue S, Ranger N, Vuillard C, Do Vale J, Zucman N, Alberdi A, Ricard JD, Roux D
The 16S rRNA lung microbiome in mechanically ventilated patients: a methodological study.
Experimental Lung Research 2022, 48, 23-34.

Taillé C, Roche N, Tesson F, Tardivon C, Tran VT, Couffignal C
Belief and adherence to COVID 19-lockdown restrictions in patients with asthma versus other chronic diseases: results from a cross-sectional survey nested in the ComPaRe e-cohort, in France.
The Journal of Asthma: Official Journal of the Association for the Care of Asthma 2022, 59, 1491-1500.

Bouzid D, Mirault T, Ghazali A, Muller L, Casalino E, Peiffer Smadja N, Auber B, Guerin M, Sambet CH, Etienne I, De Lastours V, Badoual C, Lemogne C, Ruszniewski P, Université Paris Cité' Osce Study Group n, Faye A, Tran Dinh A
Feasibility of large-scale eOSCES: the simultaneous evaluation of 500 medical students during a mock examination.
Medical Education Online 2022, 27, 2084261.

Rienzo M, Skirecki T, Monneret G, Timsit JF
Immune checkpoint inhibitors for the treatment of sepsis:insights from preclinical and clinical development.
Expert Opinion on Investigational Drugs 2022, 31, 885-894.

Sénat MV, Schmitz T, Bouchghoul H, Diguisto C, Girault A, Paysant S, Sibiude J, Lassel L, Sentilhes L
Term prelabor rupture of membranes: guidelines for clinical practice from the French College of Gynaecologists and Obstetricians (CNGOF).
The Journal of Maternal-Fetal & Neonatal Medicine: The Official Journal of the European Association of Perinatal Medicine, the Federation of Asia and Oceania Perinatal Societies, the International Society of Perinatal Obstetricians 2022, 35, 3105-3109.

Joubert M, Sibiude J, Bounan S, Mandelbrot L
Mid-trimester miscarriage and subsequent pregnancy outcomes: the role of cervical insufficiency in a cohort of 175 cases.
The Journal of Maternal-Fetal & Neonatal Medicine: The Official Journal of the European Association of Perinatal Medicine, the Federation of Asia and Oceania Perinatal Societies, the International Society of Perinatal Obstetricians 2022, 35, 4698-4703.

Giacobbe DR, Roberts JA, Abdul-Aziz MH, de Montmollin E, Timsit JF, Bassetti M
Treatment of ventilator-associated pneumonia due to carbapenem-resistant Gram-negative bacteria with novel agents: a contemporary, multidisciplinary ESGCIP perspective.
Expert Review of Anti-Infective Therapy 2022, 1-17.

Casalino E, Bouzid D, Antoniol S, Choquet C, Colosi L, Pereira L, Agbessi A, Kenway P, Yazdanpanah Y, Ghazali DA
Assessment of HIV-postexposure prophylaxis prescription quality after a training programme and assistance in decisions provided by a computer-based decision program: a cross-over study.
Acta Clinica Belgica 2022, 77, 495-509.

Tsoumtsa Meda LL, Landraud L, Petracchini S, Descorps-Declere S, Perthame E, Nahori MA, Ramirez Finn L, Ingersoll MA, Patiño-Navarrete R, Glaser P, Bonnet R, Dussurget O, Denamur E, Mettouchi A, Lemichez E
The cnf1 gene is associated with an expanding Escherichia coli ST131 H30Rx/C2 subclade and confers a competitive advantage for gut colonization.
Gut Microbes 2022, 14, 2121577.

Radjabaly Mandjee A, Filippetti L, Goehringer F, Duval X, Botelho-Nevers E, Tribouilloy C, Huguet R, Chirouze C, Erpelding ML, Hoen B, Selton-Suty C, Agrinier N, Lefèvre B, investigators of the French AEPEI Observatory on Infective Endocarditis (Association pour l’Etude et la Prévention de l’Endocardite Infectieuse)
Characteristics of patients with infective endocarditis and no underlying cardiac conditions.
Infectious Diseases (London, England) 2022, 54, 656-665.

Planchais C, Fernández I, Bruel T, de Melo GD, Prot M, Beretta M, Guardado-Calvo P, Dufloo J, Molinos-Albert LM, Backovic M, Chiaravalli J, Giraud E, Vesin B, Conquet L, Grzelak L, Planas D, Staropoli I, Guivel-Benhassine F, Hieu T, Boullé M, Cervantes-Gonzalez M, Ungeheuer MN, Charneau P, van der Werf S, Agou F, French COVID Cohort Study Group, CORSER Study Group, Dimitrov JD, Simon-Lorière E, Bourhy H, Montagutelli X, Rey FA, Schwartz O, Mouquet H
Potent human broadly SARS-CoV-2-neutralizing IgA and IgG antibodies effective against Omicron BA.1 and BA.2.
The Journal of Experimental Medicine 2022, 219, e20220638.

Möllenhoff K, Loingeville F, Bertrand J, Nguyen TT, Sharan S, Zhao L, Fang L, Sun G, Grosser S, Mentré F, Dette H
Efficient model-based bioequivalence testing.
Biostatistics (Oxford, England) 2022, 23, 314-327.

Royer G, Clermont O, Condamine B, Mercier-Darty M, Laouénan C, Lefort A, Denamur E, de Lastours V, COLIBAFI and SEPTICOLI Groups
O-Antigen Targeted Vaccines Against Escherichia coli May Be Useful in Reducing Morbidity, Mortality, and Antimicrobial Resistance.
Clinical Infectious Diseases: An Official Publication of the Infectious Diseases Society of America 2022, 74, 364-366.

Tinévez C, Velardo F, Ranc AG, Dubois D, Pailhoriès H, Codde C, Join-Lambert O, Gras E, Corvec S, Neuwirth C, Melenotte C, Dorel M, Lagneaux AS, Pichon M, Doat V, Fournier D, Lemaignen A, Bouard L, Patoz P, Hery-Arnaud G, Lemaitre N, Couzigou C, Guillard T, Recalt E, Bille E, Belaroussi Y, Neau D, Cazanave C, Lehours P, Puges M
Retrospective Multicentric Study on Campylobacter spp. Bacteremia in France: The Campylobacteremia Study..
Clinical infectious diseases : an official publication of the Infectious Diseases Society of America 2022, 75, 702-709.

Timsit JF, Paul M, Shields RK, Echols R, Baba T, Yamano Y, Portsmouth S
Cefiderocol for the Treatment of Infections Due To Metallo-Beta-Lactamase-Producing Pathogens in the CREDIBLE-CR And APEKS-NP Phase 3 Randomized Studies.
Clinical Infectious Diseases: An Official Publication of the Infectious Diseases Society of America 2022, ciac078.

Coppée R, Bailly J, Sarrasin V, Vianou B, Zinsou BE, Mazars E, Georges H, Hamane S, Lavergne RA, Dannaoui E, Balikagala B, Fukuda N, Odongo-Aginya EI, Mita T, Houzé S, Clain J
Circulation of an Artemisinin-Resistant Malaria Lineage in a Traveler Returning from East Africa to France.
Clinical Infectious Diseases: An Official Publication of the Infectious Diseases Society of America 2022, 75, 1242-1244.

Eimer J, Fréchet-Jachym M, Le Dû D, Caumes E, El-Helali N, Marigot-Outtandy D, Mechai F, Peytavin G, Pourcher V, Rioux C, Yazdanpanah Y, Robert J, Guglielmetti L, LZDM group
Increased linezolid plasma concentrations are associated with the development of severe toxicity in MDR-TB treatment.
Clinical Infectious Diseases: An Official Publication of the Infectious Diseases Society of America 2022, ciac485.

Sengupta SP, Prendergast B, Laroche C, Furnaz S, Ronderos R, Almaghraby A, Asch FM, Blechova K, Zaky H, Strahilevitz J, Dworakowski R, Miyasaka Y, Sebag I, Izumi C, Axler O, Jamiel A, Philip M, Campos Vieira ML, Lancellotti P, Habib G, EURO-ENDO Investigators Group
Socio-Economic Variations Determine the Clinical Presentation, Aetiology and Outcome of Infective Endocarditis: a Prospective Cohort Study from the ESC-EORP EURO-ENDO (European Infective Endocarditis) Registry.
European Heart Journal. Quality of Care & Clinical Outcomes 2022, qcac012.

Kong WKF, Salsano A, Giacobbe DR, Popescu BA, Laroche C, Duval X, Schueler R, Moreo A, Colonna P, Piper C, Calvo-Iglesias F, Badano LP, Srdanovic I, Boutoille D, Huttin O, Stöhr E, Timóteo AT, Vaskelyte JJ, Sadeghpour A, Tornos P, Abid L, Poh KK, Habib G, Lancellotti P
Outcomes of culture-negative vs. culture-positive infective endocarditis: the ESC-EORP EURO-ENDO registry.
European Heart Journal 2022, 43, 2770-2780.

Ghosn J, Assoumou L, Lascoux-Combe C, Peytavin G, Amat K, Gabassi A, Le MP, Nzalakanda R, Valin N, Landman R, Chaix ML, Delaugerre C
HIV-1 RNA Kinetics in Blood Plasma and in Seminal Plasma of Men Starting a Dolutegravir-Based Triple-Combination Regimen at the Time of Primary HIV-1 Infection.
The Journal of Infectious Diseases 2022, 225, 116-120.

Le Hingrat Q, Collin G, Damond F, Peytavin G, Lebourgeois S, Ghosn J, Bachelard A, Ferré VM, Matheron S, Descamps D, Charpentier C
In vitro analysis of the replicative capacity and phenotypic susceptibility to integrase inhibitors of HIV-2 mutants with integrase insertions.
The Journal of Antimicrobial Chemotherapy 2022, 77, 409-412.

Delory T, Le Bel J, Lariven S, Peiffer-Smadja N, Lescure FX, Bouvet E, Jeanmougin P, Tubach F, Boëlle PY
Computerized decision support system (CDSS) use for surveillance of antimicrobial resistance in urinary tract infections in primary care.
The Journal of Antimicrobial Chemotherapy 2022, 77, 524-530.

Lê MP, Ferré VM, Mazy F, Bourgeois-Moine A, Damond F, Matheron S, Descamps D, Ghosn J, Peytavin G
Bictegravir pharmacokinetics in a late-presenting HIV-1-infected pregnant woman: a case report.
The Journal of Antimicrobial Chemotherapy 2022, 77, 851-853.

Vehreschild MJGT, Ducher A, Louie T, Cornely OA, Feger C, Dane A, Varastet M, Vitry F, de Gunzburg J, Andremont A, Mentré F, Wilcox MH
An open randomized multicentre Phase 2 trial to assess the safety of DAV132 and its efficacy to protect gut microbiota diversity in hospitalized patients treated with fluoroquinolones.
The Journal of Antimicrobial Chemotherapy 2022, 77, 1155-1165.

Thill P, Robineau O, Roosen G, Patoz P, Gachet B, Lafon-Desmurs B, Tetart M, Nadji S, Senneville E, Blondiaux N
Rifabutin versus rifampicin bactericidal and antibiofilm activities against clinical strains of Staphylococcus spp. isolated from bone and joint infections..
The Journal of antimicrobial chemotherapy 2022, 77, 1036-1040.

Martin-Loeches I, Timsit JF, Kollef MH, Wunderink RG, Shime N, Nováček M, Kivistik Ü, Réa-Neto Á, Bruno CJ, Huntington JA, Lin G, Jensen EH, Motyl M, Yu B, Gates D, Butterton JR, Rhee EG
Clinical and microbiological outcomes, by causative pathogen, in the ASPECT-NP randomized, controlled, Phase 3 trial comparing ceftolozane/tazobactam and meropenem for treatment of hospital-acquired/ventilator-associated bacterial pneumonia.
The Journal of Antimicrobial Chemotherapy 2022, 77, 1166-1177.

Labarthe L, Gelé T, Gouget H, Benzemrane MS, Le Calvez P, Legrand N, Lambotte O, Le Grand R, Bourgeois C, Barrail-Tran A
Pharmacokinetics and tissue distribution of tenofovir, emtricitabine and dolutegravir in mice.
The Journal of Antimicrobial Chemotherapy 2022, 77, 1094-1101.

Canouï E, Kerneis S, Morand P, Enser M, Gauzit R, Eyrolle L, Leclerc P, Contejean A, Zheng Y, Anract P, Hirt D, Treluyer JM, Bouazza N, Benaboud S
Oral levofloxacin: population pharmacokinetics model and pharmacodynamics study in bone and joint infections.
The Journal of Antimicrobial Chemotherapy 2022, 77, 1344-1352.

Lingas G, Néant N, Gaymard A, Belhadi D, Peytavin G, Hites M, Staub T, Greil R, Paiva JA, Poissy J, Peiffer-Smadja N, Costagliola D, Yazdanpanah Y, Wallet F, Gagneux-Brunon A, Mentré F, Ader F, Burdet C, Guedj J, Bouscambert-Duchamp M
Effect of remdesivir on viral dynamics in COVID-19 hospitalized patients: a modelling analysis of the randomized, controlled, open-label DisCoVeRy trial.
The Journal of Antimicrobial Chemotherapy 2022, 77, 1404-1412.

Buis DTP, Prins JM, Betica-Radic L, de Boer MGJ, Ekkelenkamp M, Kofteridis D, Peiffer-Smadja N, Schouten J, Spernovasilis N, Tattevin P, Ten Oever J, Sigaloff KCE
Current clinical practice in antibiotic treatment of Staphylococcus aureus bacteraemia: results from a survey in five European countries.
The Journal of Antimicrobial Chemotherapy 2022, 77, 2827-2834.

Escolà-Vergé L, Rello P, Declerck C, Dubée V, Rouleau F, Duval X, Habib G, Lavie-Badie Y, Martin-Blondel G, Porte L, Bouiller K, Goehringer F, Selton-Suty C, Lamas CdC, Nacinovich F, Issa N, Richaud C, Hammoudi N, Barranco FJ, Almirante B, Tattevin P, Fernández-Hidalgo N
Infective endocarditis in pregnant women without intravenous drug use: a multicentre retrospective case series.
The Journal of Antimicrobial Chemotherapy 2022, 77, 2701-2705.

Breton G, Diallo OH, Cissé M, Diallo OH, Diallo NA, Soumaoro SA, Camara Y, Montoyo A, Rouzioux C, Koita Y, Peytavin G, Tubiana R, Frange P, ANRS 12344-DIAVINA study group
HIV stigma limits the effectiveness of PMTCT in Guinea: the ANRS 12344-DIAVINA study.
The Journal of Antimicrobial Chemotherapy 2022, 77, 3093-3101.

Grohs P, Vilfaillot A, Zahar JR, Barbut F, Frange P, Casetta A, Moulin V, Lawrence C, Baune P, Bourgeois C, Bouffier A, Laussucq C, Sienzonit L, Picard S, Podglajen I, Kassis-Chikhani N
Faecal carriage of multidrug-resistant bacteria and associated risk factors: results from a point prevalence study.
The Journal of Antimicrobial Chemotherapy 2022, 77, 2667-2678.

Liegeon G, Assoumou L, Ghosn J, El Mouhebb M, Palich R, Palacios C, Slama L, Surgers L, Genin M, Beniguel L, Goldwirt L, Duvivier C, Rojas Castro D, Costagliola D, Molina JM, ANRS-PREVENIR Study Group
Impact on renal function of daily and on-demand HIV pre-exposure prophylaxis in the ANRS-PREVENIR study.
The Journal of Antimicrobial Chemotherapy 2022, dkac336.

Bidet P, Birgy A, Ouldali N, Béchet S, Levy C, Madhi F, Sobral E, Cohen R, Bonacorsi S
Comparative genomic analysis of ESBL-producing Escherichia coli from faecal carriage and febrile urinary tract infection in children: a prospective multicentre study.
JAC-antimicrobial resistance 2022, 4, dlac056.

Hobson CA, Vigue L, Naimi S, Chassaing B, Magnan M, Bonacorsi S, Gachet B, El Meouche I, Birgy A, Tenaillon O
MiniBioReactor Array (MBRA) in vitro gut model: a reliable system to study microbiota-dependent response to antibiotic treatment.
JAC-antimicrobial resistance 2022, 4, dlac077.

Davido B, D'Anglejan E, Baudoin R, Dahmane L, Chaud A, Cortier M, Vauloup-Fellous C, De Truchis P, Ghosn J
Monkeypox outbreak 2022: an unusual case of peritonsillar abscess in a person previously vaccinated against smallpox.
Journal of Travel Medicine 2022, 29, taac082.

Fleurier S, Dapa T, Tenaillon O, Condon C, Matic I
rRNA operon multiplicity as a bacterial genome stability insurance policy.
Nucleic Acids Research 2022, 50, 12601-12620.

Lao J, Lacroix T, Guédon G, Coluzzi C, Payot S, Leblond-Bourget N, Chiapello H
ICEscreen: a tool to detect Firmicute ICEs and IMEs, isolated or enclosed in composite structures.
NAR genomics and bioinformatics 2022, 4, lqac079.

Pansu N, Le Moing V, Poizot-Martin I, Joly V, Allavena C, Hocqueloux L, Duvivier C, Lourenco J, Jovelin T, Reynes J, Makinson A
Pneumocystis jirovecii Pneumonia and Toxoplasmosis in PWH With HIV-Controlled Disease Treated for Solid Malignancies: A DAT'AIDS Study.
Open Forum Infectious Diseases 2022, 9, ofac109.

Delaugerre C, Assoumou L, Maylin S, Minier M, Gabassi A, Genin M, Beniguel L, Ghosn J, de Lamballerie X, El Mouhebb M, Costagliola D, Carrat F, Molina JM, PREVENIR and SAPRIS-Sero Study Groups
Severe Acute Respiratory Syndrome Coronavirus 2 Seroprevalence Among HIV-Negative Participants Using Tenofovir/Emtricitabine-Based Preexposure Prophylaxis in 2020: A Substudy of the French National Agency for Research on AIDS and Viral Hepatitis PREVENIR and Inserm SAPRIS-Sero Cohorts.
Open Forum Infectious Diseases 2022, 9, ofac188.

Gras E, Bergeron E, Puges M, Ducours M, Leleux C, Amoureux L, Jean B, Bendjelloul I, Camelena F, Chenouard R, Mahieu R, Lemenand O, Toro A, Lecoustumier A, Lortholary O, Rodriguez Nava V, Lebeaux D, French Streptomyces Study Group
Identification of Streptomyces spp. in a Clinical Sample: Always Contamination? Results of a French Retrospective Study.
Open Forum Infectious Diseases 2022, 9, ofac271.

De Castro N, Mechaï F, Bachelet D, Canestri A, Joly V, Vandenhende M, Boutoille D, Kerjouan M, Veziris N, Molina JM, Grall N, Tattevin P, Laouénan C, Yazdanpanah Y, FAST TB Study Group
Treatment With a Three-Drug Regimen for Pulmonary Tuberculosis Based on Rapid Molecular Detection of Isoniazid Resistance: A Noninferiority Randomized Trial (FAST-TB).
Open Forum Infectious Diseases 2022, 9, ofac353.

Le Pluart D, Ruyer-Thompson M, Ferré VM, Mailhe M, Descamps D, Bouscarat F, Lescure FX, Lucet JC, Yazdanpanah Y, Ghosn J
A Healthcare-Associated Infection With Monkeypox Virus of a Healthcare Worker During the 2022 Outbreak.
Open Forum Infectious Diseases 2022, 9, ofac520.

David C, Duployez N, Eloy P, Belhadi D, Chezel J, Guern VL, Laouénan C, Fenwarth L, Rouzaud D, Mathian A, de Almeida Chaves S, Duhaut P, Fain O, Galicier L, Ghillani-Dalbin P, Kahn JE, Morel N, Perard L, Pha M, Sarrot-Reynauld F, Aumaitre O, Chasset F, Limal N, Desmurs-Clavel H, Ackermann F, Amoura Z, Papo T, Preudhomme C, Costedoat-Chalumeau N, Sacre K
Clonal haematopoiesis of indeterminate potential and cardiovascular events in systemic lupus erythematosus (HEMATOPLUS study).
Rheumatology (Oxford, England) 2022, 61, 4355-4363.

Zhao L, Wymant C, Blanquart F, Golubchik T, Gall A, Bakker M, Bezemer D, Hall M, Ong SH, Albert J, Bannert N, Fellay J, Grabowski MK, Gunsenheimer-Bartmeyer B, Günthard HF, Kivelä P, Kouyos RD, Laeyendecker O, Meyer L, Porter K, van Sighem A, van der Valk M, Berkhout B, Kellam P, Cornelissen M, Reiss P, Fraser C, Ferretti L
Phylogenetic estimation of the viral fitness landscape of HIV-1 set-point viral load.
Virus Evolution 2022, 8, veac022.

Abid S, Papin G, Vellieux G, de Montmollin E, Wicky PH, Patrier J, Jaquet P, Bouadma L, Rouvel-Tallec A, Timsit JF, Sonneville R
A Simplified Electroencephalography Montage and Interpretation for Evaluation of Comatose Patients in the ICU.
Critical Care Explorations 2022, 4, e0781.

Vacheron CH, Lepape A, Savey A, Machut A, Timsit JF, Vanhems P, Le QV, Egbeola J, Martin M, Maxime V, Pugliesi PS, Maucort-Boulch D, Friggeri A, REA-REZO Study Group
Increased Incidence of Ventilator-Acquired Pneumonia in Coronavirus Disease 2019 Patients: A Multicentric Cohort Study.
Critical Care Medicine 2022, 50, 449-459.

de Montmollin E, Dupuis C, Jaquet P, Sarton B, Sazio C, Susset V, Conrad M, Argaud L, Demeret S, Tadié JM, Barbier F, Wolff M, Timsit JF, Visseaux B, Sonneville R, ENCEPHALITICA Study Group
Herpes Simplex Virus Encephalitis With Initial Negative Polymerase Chain Reaction in the Cerebrospinal Fluid: Prevalence, Associated Factors, and Clinical Impact.
Critical Care Medicine 2022, 50, e643-e648.

Jaquet P, Legouy C, Le Fevre L, Grinea A, Sinnah F, Franchineau G, Patrier J, Marzouk M, Wicky PH, Alexis Geoffroy P, Arnoult F, Vledouts S, de Montmollin E, Bouadma L, Timsit JF, Sharshar T, Sonneville R
Neurologic Outcomes of Survivors of COVID-19-Associated Acute Respiratory Distress Syndrome Requiring Intubation.
Critical Care Medicine 2022, 50, e674-e682.

Dollfus C, Le Chenadec J, Mandelbrot L, Tubiana R, Faye A, Brossard M, Frange P, Blanche S, Warszawski J, ANRS CO1/CO11 study group
Improved Hematologic Outcomes in HIV1-Exposed Infants Receiving Nevirapine Compared With Zidovudine for Postnatal Prophylaxis in a High Resource Setting.
The Pediatric Infectious Disease Journal 2022, 41, 420-423.

Rybak A, Aupiais C, Cotillon M, Basmaci R, de Pontual L, Bonacorsi S, Mariani P, Landraud L, Brichler S, Poilane I, Ouldali N, Titomanlio L
Reassessing the Performance of the "Step-By-Step" Approach to Febrile Infants 90 Days of Age and Younger in the Context of the COVID-19 Pandemic: A Multicentric Retrospective Study.
The Pediatric Infectious Disease Journal 2022, 41, e365-e368.

Bizot E, Truong J, Mariani-Kurkdjian P, Bonacorsi S, Faye A, Caseris M
Pediatric Enterococcal Bacteremia: A 12-Year Retrospective Study in a French Pediatric Center.
The Pediatric Infectious Disease Journal 2022, 41, e346-e350.

Guerra D, Vidal P, Paccoud O, Maillard A, Cachera L, Junot H, Gauzit R, Zahar JR, Abreu MA, Bleibtreu A
Dual beta-lactam treatment: Pros and cons.
Porto Biomedical Journal 2022, 7, e189.

Thy M, Gaudemer A, Vellieux G, Sonneville R
Critical care management of meningitis and encephalitis: an update.
Current Opinion in Critical Care 2022, 28, 486-494.

Claessens YE, Berthier F, Baqué-Juston M, Perrin C, Faraggi M, Keita-Perse O, Duval X
Early chest CT-scan in emergency patients affected by community-acquired pneumonia is associated with improved diagnosis consistency.
European Journal of Emergency Medicine: Official Journal of the European Society for Emergency Medicine 2022, 29, 417-420.

Durier C, Mercier-Delarue S, Verdière NCD, Meiffrédy V, Matheron S, Samri A, Resch M, Marchand L, Autran B, Launay O, Simon F, ANRS NOVAA EP46 study group
A 5-year neutralizing immune response to yellow fever vaccine in HIV-infected and HIV-uninfected adults.
AIDS (London, England) 2022, 36, 319-321.

Hassold N, Brichler S, Ouedraogo E, Leclerc D, Carroue S, Gater Y, Alloui C, Carbonnelle E, Bouchaud O, Mechai F, Cordel H, Delagreverie H
Impaired antibody response to COVID-19 vaccination in advanced HIV infection.
AIDS (London, England) 2022, 36, F1-F5.

Le Hingrat Q, Collin G, Bachelard A, Ghosn J, Chalal S, Pacanowski J, Peytavin G, Weinheimer S, Marsolais C, Damond F, Matheron S, Charpentier C, Descamps D, and the ANRS CO5 HIV-2 cohort
Ibalizumab shows in vitro activity against group A and group B HIV-2 clinical isolates.
AIDS (London, England) 2022

Pourcher V, Capeau J, Dudoit Y, Boccara F, Soulié C, Ndoadoumgue AL, Charlotte F, Fellahi S, Bastard JP, Béréziat V, Lagathu C, Marcelin AG, Peytavin G, Boutron-Ruault MC, Tubbax C, D'Avout D'Auerstaedt A, Valantin MA, Schneider L, Costagliola D, Katlama C, Assoumou L, Pourcher G
Comparison of HIV-infected and non-infected patients undergoing bariatric surgery: the ObeVIH study.
Journal of Acquired Immune Deficiency Syndromes (1999) 2022

Kherabi Y, de Castro N, Sellier PO, Hamet G, Brun A, Méchaï F, Joly V, Yazdanpanah Y, Molina JM
Efficacy and safety of efavirenz, raltegravir and dolutegravir in HIV-1/TB co-infection. A multicenter retrospective cohort study in France.
Journal of Acquired Immune Deficiency Syndromes (1999) 2022

Wicky PH, d'Humières C, Timsit JF
How common is ventilator-associated pneumonia after coronavirus disease 2019?.
Current Opinion in Infectious Diseases 2022, 35, 170-175.

Thy M, Gaudemer A, d'Humières C, Sonneville R
Brain abscess in immunocompetent patients: recent findings.
Current Opinion in Infectious Diseases 2022, 35, 238-245.

Zahar JR, Timsit JF
Risk stratification for selecting empiric antibiotherapy during and after COVID-19.
Current Opinion in Infectious Diseases 2022, 35, 605-613.

Chotard E, Jacquier H, Bart G, Richette P, Rioux C, Joly V, Goossens J, Palazzo E, Forien M, Jelin G, Yazdanpanah Y, Dieudé P, Le Goff B, Ottaviani S
MRI Features Associated With the Detection of Microbial Pathogens by CT-Guided Biopsy in Septic Spondylodiscitis.
Journal of Clinical Rheumatology: Practical Reports on Rheumatic & Musculoskeletal Diseases 2022, 28, e189-e194.

Alkhalil R, Ouersighni A, Kenway P, Breque C, Oriot D, Ghazali DA
Impact of a Multidisciplinary Simulation-Based Training Program on the Multiple Techniques of Intraosseous Access: A Prospective Multicentric Study.
Simulation in Healthcare: Journal of the Society for Simulation in Healthcare 2022

Tran-Dinh A, Slassi L, De Tymowski C, Assadi M, Tanaka S, Zappella N, Lortat Jacob B, Jean-Baptiste S, Atchade E, Castier Y, Mal H, Mordant P, Armand-Lefèvre L, Messika J, Grall N, Montravers P
Secondary Prophylaxis With Inhaled Colistin to Prevent Recurrence of Pseudomonas aeruginosa and Extended-spectrum β-lactamase-producing Enterobacterales Pneumonia in ICU After Lung Transplantation: A Before-and-after Retrospective Cohort Analysis.
Transplantation 2022, 106, 2232-2240.

Lehtinen S, Croucher NJ, Blanquart F, Fraser C
Epidemiological dynamics of bacteriocin competition and antibiotic resistance.
Proceedings. Biological Sciences 2022, 289, 20221197.

Bienvenu AL, Pavese P, Leboucher G, Berger P, Roux S, Charmillon A, Foroni L, Menotti J, Lebeaux D, Mayan R, Mondain V, Robin C, Lesprit P, Alfandari S, Kernéis S
Practical checklist for implementation of antifungal stewardship programmes.
Journal of Medical Microbiology 2022, 71,

Delaunay-Moisan A, Guilleminot T, Semeraro M, Briand N, Bader-Meunier B, Berthaud R, Morelle G, Quartier P, Galeotti C, Basmaci R, Benoist G, Gajdos V, Lorrot M, Rifai M, Crespin M, M'Sakni Z, Padavia F, Savetier-Leroy C, Lorenzi M, Maurin C, Behillil S, de Pontual L, Elenga N, Bouazza N, Moltrecht B, van der Werf S, Leruez-Ville M, Sermet-Gaudelus I
Saliva for molecular detection of SARS-CoV-2 in pre-school and school-age children.
Environmental Microbiology 2022, 24, 4725-4737.

Eslier M, Deneux-Tharaux C, Sauvegrain P, Schmitz T, Luton D, Mandelbrot L, Estellat C, Azria E
Severe maternal morbidity among undocumented migrant women in the PreCARE prospective cohort study.
BJOG: an international journal of obstetrics and gynaecology 2022, 129, 1762-1771.

Henriot P, Castry M, Luong Nguyen LB, Shimakawa Y, Jean K, Temime L
Meta-analysis: Risk of hepatitis C virus infection associated with hospital-based invasive procedures.
Alimentary Pharmacology & Therapeutics 2022

Saint-Lary L, Diallo A, de Monteynard LA, Paul C, Marchand L, Tubiana R, Warszawski J, Mandelbrot L, Rekacewicz C, Petrov-Sanchez V, Faye A, Sibiude J, Dabis F, Sommet A, Leroy V
In utero exposure to antiretroviral drugs and pregnancy outcomes: Analysis of the French ANRS pharmacovigilance database.
British Journal of Clinical Pharmacology 2022, 88, 942-964.

Kerioui M, Bertrand J, Bruno R, Mercier F, Guedj J, Desmée S
Modelling the association between biomarkers and clinical outcome: An introduction to nonlinear joint models.
British Journal of Clinical Pharmacology 2022, 88, 1452-1463.

Demouche S, Juge PA, Charles P, Descamps V, Benali K, Brunet-Possenti F
Safe use of tocilizumab in rheumatic patients with Kaposi's sarcoma.
Dermatologic Therapy 2022, 35, e15797.

Congo-Ouedraogo M, Poncin T, Sangaré L, Mérimèche M, Braille A, Jacquier H, Ouedraogo AS, Dah E, Traore I, Corander J, Haukka K, Berçot B, Godreuil S
Genomic and antimicrobial resistance analyses of Neisseria gonorrhoeae isolates, Burkina Faso, 2018-2019.
Journal of the European Academy of Dermatology and Venereology: JEADV 2022, 36, e565-e568.

David C, Costedoat-Chalumeau N, Belhadi D, Laouénan C, Boutten A, Chezel J, Rouzaud D, Dehoux M, Guern VL, Mathian A, Chaves SdA, Duhaut P, Fain O, Galicier L, Ghillani-Dalbin P, Kahn JE, Morel N, Perard L, Pha M, Sarrot-Reynauld F, Aumaitre O, Chasset F, Limal N, Desmurs-Clavel H, Ackermann F, Amoura Z, Papo T, Sacre K
Soluble CD163 and incident cardiovascular events in patients with systemic lupus erythematosus: An observational cohort study.
Journal of Internal Medicine 2022, 292, 536-539.

Valade S, Picard M, Mokart D, Calvet L, Bruneel F, de Montmollin E, Aissaoui N, Champigneulle B, Bigé N, Boissier F, Pène F, Mayaux J, Argaud L, Moreau AS, Murgier M, Azoulay E, Darmon M
Critically ill patients with severe infections related to Geotrichum species: A French retrospective multicentre study.
Mycoses 2022, 65, 226-232.

Geslain G, Ntorkou A, Ali L, Naudin J, Levy M
Trauma with an air compressor, a massive emphysema..
Pediatrics international : official journal of the Japan Pediatric Society 2022, 64, e15110.

Mageau A, Borie R, Crestani B, Timsit JF, Papo T, Sacre K
Epidemiology of interstitial lung disease in systemic lupus erythematosus in France: A nation-wide population-based study over 10 years.
Respirology (Carlton, Vic.) 2022

Kherabi Y, Messika J, Peiffer-Smadja N
Machine learning, antimicrobial stewardship, and solid organ transplantation: Is this the future?.
Transplant Infectious Disease: An Official Journal of the Transplantation Society 2022, 24, e13957.

Wymant C, Bezemer D, Blanquart F, Ferretti L, Gall A, Hall M, Golubchik T, Bakker M, Ong SH, Zhao L, Bonsall D, de Cesare M, MacIntyre-Cockett G, Abeler-Dörner L, Albert J, Bannert N, Fellay J, Grabowski MK, Gunsenheimer-Bartmeyer B, Günthard HF, Kivelä P, Kouyos RD, Laeyendecker O, Meyer L, Porter K, Ristola M, van Sighem A, Berkhout B, Kellam P, Cornelissen M, Reiss P, Fraser C, Netherlands ATHENA HIV Observational Cohort†, BEEHIVE Collaboration†
A highly virulent variant of HIV-1 circulating in the Netherlands.
Science (New York, N.Y.) 2022, 375, 540-545.

Hu J, Amor DR, Barbier M, Bunin G, Gore J
Emergent phases of ecological diversity and dynamics mapped in microcosms.
Science (New York, N.Y.) 2022, 378, 85-89.

Lapaillerie D, Charlier C, Guyonnet-Dupérat V, Murigneux E, Fernandes HS, Martins FG, Magalhães RP, Vieira TF, Richetta C, Subra F, Lebourgeois S, Charpentier C, Descamps D, Visseaux B, Weigel P, Favereaux A, Beauvineau C, Buron F, Teulade-Fichou MP, Routier S, Gallois-Montbrun S, Meertens L, Delelis O, Sousa SF, Parissi V
Selection of Bis-Indolyl Pyridines and Triphenylamines as New Inhibitors of SARS-CoV-2 Cellular Entry by Modulating the Spike Protein/ACE2 Interfaces.
Antimicrobial Agents and Chemotherapy 2022, 66, e0008322.

Hobson CA, Pierrat G, Tenaillon O, Bonacorsi S, Bercot B, Jaouen E, Jacquier H, Birgy A
Klebsiella pneumoniae Carbapenemase Variants Resistant to Ceftazidime-Avibactam: an Evolutionary Overview.
Antimicrobial Agents and Chemotherapy 2022, 66, e0044722.

Paloque L, Coppée R, Stokes BH, Gnädig NF, Niaré K, Augereau JM, Fidock DA, Clain J, Benoit-Vical F
Mutation in the Plasmodium falciparum BTB/POZ Domain of K13 Protein Confers Artemisinin Resistance.
Antimicrobial Agents and Chemotherapy 2022, 66, e0132021.

Bizot E, Cointe A, Bidet P, Mariani-Kurkdjian P, Hobson CA, Courroux C, Liguori S, Bridier-Nahmias A, Magnan M, Merimèche M, Caméléna F, Berçot B, Weill FX, Lefèvre S, Bonacorsi S, Birgy A
Azithromycin Resistance in Shiga Toxin-Producing Escherichia coli in France between 2004 and 2020 and Detection of mef(C)-mph(G) Genes.
Antimicrobial Agents and Chemotherapy 2022, 66, e0194921.

Royer G, Ortiz de la Rosa JM, Vuillemin X, Lacombe B, Chau F, Clermont O, Mercier-Darty M, Decousser JW, Ricard JD, Nordmann P, Denamur E, Poirel L
Reduced Chlorhexidine Susceptibility Is Associated with Tetracycline Resistance tet Genes in Clinical Isolates of Escherichia coli.
Antimicrobial Agents and Chemotherapy 2022, 66, e0197221.

Royer G, Dixit Z, Pédron J, Pierrat G, Demontant V, Berçot B, Rodriguez C, Barny MA, Jacquier H, Woerther PL
Genetic and Phenotypic Study of the Pectobacterium versatile Beta-Lactamase, the Enzyme Most Similar to the Plasmid-Encoded TEM-1.
Applied and Environmental Microbiology 2022, 88, e0022022.

Marin J, Clermont O, Royer G, Mercier-Darty M, Decousser JW, Tenaillon O, Denamur E, Blanquart F
The Population Genomics of Increased Virulence and Antibiotic Resistance in Human Commensal Escherichia coli over 30 Years in France.
Applied and Environmental Microbiology 2022, 88, e0066422.

Bizot E, Cointe A, Smadja N, Sergentet D, Lefèvre S, Weill FX, Levy C, Cohen R, Mariani-Kurkdjian P, Bonacorsi S
Improved Molecular Diagnosis and Culture of the Emerging Heteropathotype Enterohemorrhagic Escherichia coli O80:H2 Using Its Non-Melibiose-Fermenting and Antibiotic-Resistance Properties.
Journal of Clinical Microbiology 2022, 60, e0153021.

Richetta C, Subra F, Malet I, Leh H, Charpentier C, Corona A, Collin G, Descamps D, Deprez E, Parissi V, Calvez V, Tramontano E, Marcelin AG, Delelis O
Mutations in the 3'-PPT Lead to HIV-1 Replication without Integration.
Journal of Virology 2022, 96, e0067622.

Su WL, Bredèche MF, Dion S, Dauverd J, Condamine B, Gutierrez A, Denamur E, Matic I
TisB Protein Protects Escherichia coli Cells Suffering Massive DNA Damage from Environmental Toxic Compounds.
mBio 2022, 13, e0038522.

Bretagne S, Sitbon K, Desnos-Ollivier M, Garcia-Hermoso D, Letscher-Bru V, Cassaing S, Millon L, Morio F, Gangneux JP, Hasseine L, Favennec L, Cateau E, Bailly E, Moniot M, Bonhomme J, Desbois-Nogard N, Chouaki T, Paugam A, Bouteille B, Pihet M, Dalle F, Eloy O, Sasso M, Demar M, Mariani-Kurkdjian P, Robert V, Lortholary O, Dromer F, French Mycoses Study Group
Active Surveillance Program to Increase Awareness on Invasive Fungal Diseases: the French RESSIF Network (2012 to 2018).
mBio 2022, 13, e0092022.

Delavy M, Burdet C, Sertour N, Devente S, Docquier JD, Grall N, Volant S, Ghozlane A, Duval X, Mentré F, d'Enfert C, Bougnoux ME, PrediRes Study Group
A Clinical Study Provides the First Direct Evidence That Interindividual Variations in Fecal β-Lactamase Activity Affect the Gut Mycobiota Dynamics in Response to β-Lactam Antibiotics.
mBio 2022, 13, e0288022.

Salmona M, Chaix ML, Feghoul L, Mahjoub N, Maylin S, Schnepf N, Jacquier H, Walle EM, Helary M, Mellon G, Osinski N, Zebiche W, Achili Y, Amarsy R, Mahé V, Le Goff J, Delaugerre C
Detection of SARS-CoV-2 in Saliva and Nasopharyngeal Swabs According to Viral Variants.
Microbiology Spectrum 2022, 10, e0213322.

Ferré VM, Peiffer-Smadja N, Kramer L, Coppée R, Kante A, Debarge M, Choquet C, Saint Joannis T, Bouzid D, Messika J, Le Grand J, Thy M, Kernéis S, Descamps D, Visseaux B, Ghosn J
Dual Monoclonal Antibodies on Sars-Cov-2 Alpha and Delta Variants: Clinical and Virological Efficacy.
Microbiology Spectrum 2022, 10, e0215222.

Lo S, Lolom I, Goldstein V, Petitjean M, Rondinaud E, Bunel-Gourdy V, Tran Dinh A, Wicky PH, Ruppé E, d'Humières C, Lucet JC, Armand-Lefèvre L
Simultaneous Hospital Outbreaks of New Delhi Metallo-β-Lactamase-Producing Enterobacterales Unraveled Using Whole-Genome Sequencing.
Microbiology Spectrum 2022, 10, e0228721.

Ferran AA, Lacroix MZ, Gourbeyre O, Huesca A, Gaborieau B, Debarbieux L, Bousquet-Mélou A
The Selection of Antibiotic- and Bacteriophage-Resistant Pseudomonas aeruginosa Is Prevented by Their Combination.
Microbiology Spectrum 2022, 10, e0287422.

Borocco C, Pouletty M, Galeotti C, Meinzer U, Faye A, Koné-Paut I, Ouldali N, Melki I
Response to: 'Correspondence on 'Paediatric multisystem inflammatory syndrome temporally associated with SARS-CoV-2 mimicking Kawasaki disease (Kawa-COVID19): a multicentre cohort'' by Mastrolia et al.
Annals of the Rheumatic Diseases 2022, 81, e219.

Chommeloux J, Pouletty M, Ouldali N, Kerneis M, Mathian A, Mestiri R, Rohmer J, Hekimian G, Melki I, Great Paris Region (GPR) Kawa-COVID-19 consortium
Response to: 'Correspondence on 'Paediatric multisystem inflammatory syndrome temporally associated with SARS-CoV-2 mimicking Kawasaki disease (Kawa-COVID-19): a multicentre cohort' by Ventura et al'.
Annals of the Rheumatic Diseases 2022, 81, e240.

Mageau A, Papo T, Ruckly S, Strukov A, van Gysel D, Sacre K, Timsit JF
Survival after COVID-19-associated organ failure among inpatients with systemic lupus erythematosus in France: a nationwide study.
Annals of the Rheumatic Diseases 2022, 81, 569-574.

Mageau A, Ferré VM, Goulenok T, Charpentier C, Delory N, Francois C, Houhou-Fidouh N, Papo T, Descamps D, Sacre K
Severely impaired humoral response against SARS-CoV-2 variants of concern following two doses of BNT162b2 vaccine in patients with systemic lupus erythematosus (SLE).
Annals of the Rheumatic Diseases 2022, 81, 1194-1196.

Truong J, Cointe A, Le Roux E, Bidet P, Michel M, Boize J, Mariani-Kurkdjian P, Caseris M, Hobson CA, Desmarest M, Titomanlio L, Faye A, Bonacorsi S
Clinical impact of a gastrointestinal PCR panel in children with infectious diarrhoea.
Archives of Disease in Childhood 2022, 107, 601-605.

Plaçais L, Dalle S, Dereure O, Trabelsi S, Dalac S, Legoupil D, Montaudié H, Arnault JP, De Quatrebarbes J, Saiag P, Brunet-Possenti F, Lesimple T, Maubec E, Aubin F, Granel-Brocard F, Grob JJ, Stoebner PE, Allayous C, Oriano B, Dutriaux C, Mortier L, Lebbe C
Risk of irAEs in patients with autoimmune diseases treated by immune checkpoint inhibitors for stage III or IV melanoma: results from a matched case-control study.
Annals of the Rheumatic Diseases 2022, 81, 1445-1452.

Legrand M, Fong N, Laouénan C, Ghosn J, Thill B, Faure K, Garot D, Goujard C, Curlier E, Resche-Rigon M, Rossignol P, Pirracchio R
Risk factors of long term symptoms and outcomes among patients discharged after covid-19: prospective, multicentre observational study.
BMJ medicine 2022, 1, e000093.

Labbe V, Contou D, Heming N, Megarbane B, Ait-Oufella H, Boissier F, Carreira S, Robert A, Vivier E, Fejjal M, Doyen D, Monchi M, Preau S, Noel-Savina E, Souweine B, Zucman N, Picos SA, Dres M, Juguet W, Mariotte E, Timsit JF, Turpin M, Razazi K, Gendreau S, Baloul S, Voiriot G, Fartoukh M, Audureau E, Mekontso Dessap A
Comparison of standard prophylactic, intermediate prophylactic and therapeutic anticoagulation in patients with severe COVID-19: protocol for the ANTICOVID multicentre, parallel-group, open-label, randomised controlled trial.
BMJ open 2022, 12, e059383.

Marwali EM, Kekalih A, Yuliarto S, Wati DK, Rayhan M, Valerie IC, Cho HJ, Jassat W, Blumberg L, Masha M, Semple C, Swann OV, Kohns Vasconcelos M, Popielska J, Murthy S, Fowler RA, Guerguerian AM, Streinu-Cercel A, Pathmanathan MD, Rojek A, Kartsonaki C, Gonçalves BP, Citarella BW, Merson L, Olliaro PL, Dalton HJ, International Severe Acute Respiratory and emerging Infection Consortium (ISARIC) Clinical Characterization Group Investigators
Paediatric COVID-19 mortality: a database analysis of the impact of health resource disparity.
BMJ paediatrics open 2022, 6, e001657.

Poncet L, Panjo H, Schmitz T, Luton D, Mandelbrot L, Estellat C, Andro A, Ringa V, Azria E
Gestational weight gain in a migration context: are migrant women more at risk of inadequate or excessive weight gain during pregnancy?.
Journal of Epidemiology and Community Health 2022, 76, 230-238.

Thille AW, Coudroy R, Nay MA, Gacouin A, Decavèle M, Sonneville R, Beloncle F, Girault C, Dangers L, Lautrette A, Levrat Q, Rouzé A, Vivier E, Lascarrou JB, Ricard JD, Mekontso-Dessap A, Barberet G, Lebert C, Ehrmann S, Massri A, Bourenne J, Pradel G, Bailly P, Terzi N, Dellamonica J, Lacave G, Robert R, Frat JP, Ragot S, HIGH-WEAN Study Group and the REVA Research Network
Beneficial Effects of Noninvasive Ventilation after Extubation in Obese or Overweight Patients: A Post Hoc Analysis of a Randomized Clinical Trial.
American Journal of Respiratory and Critical Care Medicine 2022, 205, 440-449.

Dres M, de Abreu MG, Merdji H, Müller-Redetzky H, Dellweg D, Randerath WJ, Mortaza S, Jung B, Bruells C, Moerer O, Scharffenberg M, Jaber S, Besset S, Bitter T, Geise A, Heine A, Malfertheiner MV, Kortgen A, Benzaquen J, Nelson T, Uhrig A, Moenig O, Meziani F, Demoule A, Similowski T, RESCUE-2 Study Group Investigators
Randomized Clinical Study of Temporary Transvenous Phrenic Nerve Stimulation in Difficult-to-Wean Patients.
American Journal of Respiratory and Critical Care Medicine 2022, 205, 1169-1178.

Demoule A, Hajage D, Messika J, Jaber S, Diallo H, Coutrot M, Kouatchet A, Azoulay E, Fartoukh M, Hraiech S, Beuret P, Darmon M, Decavèle M, Ricard JD, Chanques G, Mercat A, Schmidt M, Similowski T, REVA Network (Research Network in Mechanical Ventilation)
Prevalence, Intensity, and Clinical Impact of Dyspnea in Critically Ill Patients Receiving Invasive Ventilation.
American Journal of Respiratory and Critical Care Medicine 2022, 205, 917-926.

Hajage D, Combes A, Guervilly C, Lebreton G, Mercat A, Pavot A, Nseir S, Mekontso-Dessap A, Mongardon N, Mira JP, Ricard JD, Beurton A, Tachon G, Kontar L, Le Terrier C, Richard JC, Mégarbane B, Keogh RH, Belot A, Maringe C, Leyrat C, Schmidt M, COVID-ICU Investigators
Extracorporeal Membrane Oxygenation for Severe Acute Respiratory Distress Syndrome Associated with COVID-19: An Emulated Target Trial Analysis.
American Journal of Respiratory and Critical Care Medicine 2022, 206, 281-294.

Maggiore SM, Jaber S, Grieco DL, Mancebo J, Zakynthinos S, Demoule A, Ricard JD, Navalesi P, Vaschetto R, Hraiech S, Klouche K, Frat JP, Lemiale V, Fanelli V, Chanques G, Natalini D, Ischaki E, Reuter D, Morán I, La Combe B, Longhini F, De Gaetano A, Ranieri VM, Brochard LJ, Antonelli M, RINO Trial Study Group
High-Flow Versus VenturiMask Oxygen Therapy to Prevent Reintubation in Hypoxemic Patients after Extubation: A Multicenter Randomized Clinical Trial.
American Journal of Respiratory and Critical Care Medicine 2022, 206, 1452-1462.

Vacheron CH, Lepape A, Savey A, Machut A, Timsit JF, Comparot S, Courno G, Vanhems P, Landel V, Lavigne T, Bailly S, Bettega F, Study Group RR, Maucort-Boulch D, Friggeri A
Attributable Mortality of Ventilator-associated Pneumonia Among COVID-19 Patients.
American Journal of Respiratory and Critical Care Medicine 2022

Vieillard-Baron A, Flicoteaux R, Salmona M, Chariot A, De Maupeou D'Ableiges B, Darmon M, Batteux F
Omicron Variant in the Critical Care Units of the Paris Metropolitan Area: The Reality Research Group..
American journal of respiratory and critical care medicine 2022, 206, 349-363.

Morvillers JM, Roy C, Laouénan C, Goutté N
[Therapeutic alliance between sectorial psychiatry inpatients and nurses and aides: A prospective, observational and cross-sectional study].
Canadian Journal of Psychiatry. Revue Canadienne De Psychiatrie 2022, 67, 854-863.

Rahib D, Bercot B, Delagreverie H, Gabassi A, Delaugerre C, Salord H, Icard V, Le Thi TT, Leveau B, Khiri H, Digne J, Didelot MN, Pisoni A, Tuaillon E, Lydié N, Vandentorren S
Online self-sampling kits for human immunodeficiency virus and other sexually transmitted infections: Feasibility, positivity rates, and factors associated with infections in France.
International journal of STD & AIDS 2022, 33, 355-362.

Guglielmetti L, Günther G, Leu C, Cirillo D, Duarte R, Garcia-Basteiro AL, Goletti D, Jankovic M, Kuksa L, Maurer FP, Méchaï F, Tiberi S, van Leth F, Veziris N, Lange C, Study Group on Mycobacteria of the European Society of Microbiology and Infectious Diseases (ESGMYC), European Society of Mycobacteriology (ESM), European Respiratory Society (ERS) and, Tuberculosis Network European Trials group (TBnet)
Rifapentine access in Europe: growing concerns over key tuberculosis treatment component.
The European Respiratory Journal 2022, 59, 2200388.

Descamps A, Lenzi N, Galtier F, Lainé F, Lesieur Z, Vanhems P, Amour S, L'Honneur AS, Fidouh N, Foulongne V, Lagathu G, Duval X, Merle C, Lina B, Carrat F, Launay O, Loubet P, FLUVAC study group
In-hospital and midterm post-discharge complications of adults hospitalised with respiratory syncytial virus infection in France, 2017-2019: an observational study.
The European Respiratory Journal 2022, 59, 2100651.

Dauriat G, Reynaud-Gaubert M, Cottin V, Lamia B, Montani D, Belhadi D, Humbert M, Laouenan C, Mal H, French group of investigators on severe PH-COPD
Severe pulmonary hypertension associated with COPD: long-term results of a prospective French multicentre cohort.
The European Respiratory Journal 2022, 60, 2102897.

Beurnier A, Yordanov Y, Dechartres A, Dinh A, Debuc E, Lescure FX, Jourdain P, Jaulmes L, Humbert M
Characteristics and outcomes of asthmatic outpatients with COVID-19 who receive home telesurveillance.
ERJ open research 2022, 8, 00012-2022.

Chevret S, Timsit JF, Biard L
Challenges of using external data in clinical trials- an illustration in patients with COVID-19.
BMC medical research methodology 2022, 22, 321.

Martin-Blondel G, Lescure FX, Assoumou L, Charpentier C, Chapplain JM, Perpoint T, Grouteau G, Cordel H, Pialoux G, Pacanowski J, Thy M, Bauvois A, Laureillard D, Hamrouni F, Algarte-Genin M, Poissy J, Descamps D, Costagliola D, CoCliCo Study Group
Increased risk of severe COVID-19 in hospitalized patients with SARS-CoV-2 Alpha variant infection: a multicentre matched cohort study.
BMC infectious diseases 2022, 22, 540.

Day MJ, Jacobsson S, Spiteri G, Kulishev C, Sajedi N, Woodford N, Blumel B, van der Werf MJ, Amato-Gauci AJ, Unemo M, Cole MJ
Significant increase in azithromycin "resistance" and susceptibility to ceftriaxone and cefixime in Neisseria gonorrhoeae isolates in 26 European countries, 2019..
BMC infectious diseases 2022, 22, 524.

Tran-Dinh A, Bouzid D, El Kalai A, Atchade E, Tanaka S, Lortat-Jacob B, Jean-Baptiste S, Zappella N, Boudinet S, Castier Y, Mal H, Mordant P, Messika J, Montravers P
Favorable, arduous or fatal postoperative pathway within 90 days of lung transplantation.
BMC pulmonary medicine 2022, 22, 326.

Fasse L, Roche N, Flahault C, Garrouste-Orgeas M, Ximenes M, Pages A, Evin A, Dauchy S, Scotte F, Le Provost JB, Blot F, Mateus C
The APSY-SED study: protocol of an observational, longitudinal, mixed methods and multicenter study exploring the psychological adjustment of relatives and healthcare providers of patients with cancer with continuous deep sedation until death.
BMC palliative care 2022, 21, 217.

Mattern J, Letendre I, Sibiude J, Pénager C, Jnifen A, Souare F, Ayel S, Nguyen T, Mandelbrot L
Diagnosis of advanced cervical cancer, missed opportunities?.
BMC women's health 2022, 22, 97.

Pham T, Beloncle F, Piquilloud L, Ehrmann S, Roux D, Mekontso-Dessap A, Carteaux G
Correction to: Assessment of a massive open online course (MOOC) incorporating interactive simulation videos on residents' knowledge retention regarding mechanical ventilation.
BMC medical education 2022, 22, 56.

Bouzid D, Mullaert J, Ghazali A, Ferré VM, Mentré F, Lemogne C, Ruszniewski P, Faye A, Dinh AT, Mirault T, Université Paris Cité Osce study group
eOSCE stations live versus remote evaluation and scores variability.
BMC medical education 2022, 22, 861.

Hedible GB, Louart S, Neboua D, Catala L, Anago G, Sawadogo AG, Kargougou GD, Meda B, Kolié JS, Hema A, Keita S, Niome M, Savadogo AS, Peters-Bokol L, Agbeci H, Zair Z, Lenaud S, Vignon M, Ouedraogo Yugbare S, Abarry H, Diakite AA, Diallo IS, Lamontagne F, Briand V, Dahourou DL, Cousien A, Ridde V, Leroy V, AIRE Research Study Group
Evaluation of the routine implementation of pulse oximeters into integrated management of childhood illness (IMCI) guidelines at primary health care level in West Africa: the AIRE mixed-methods research protocol.
BMC health services research 2022, 22, 1579.

Bosetti P, Tran Kiem C, Andronico A, Colizza V, Yazdanpanah Y, Fontanet A, Benamouzig D, Cauchemez S
Epidemiology and control of SARS-CoV-2 epidemics in partially vaccinated populations: a modeling study applied to France.
BMC medicine 2022, 20, 33.

Dupont A, Couffignal C, Arias C, Salah K, Phillips-Houlbraq M, Le Brun M, Taillé C
Outcomes and risk factors with COVID-19 or influenza in hospitalized asthma patients.
Respiratory Research 2022, 23, 342.

Coppée R, Mama A, Sarrasin V, Kamaliddin C, Adoux L, Palazzo L, Ndam NT, Letourneur F, Ariey F, Houzé S, Clain J
5WBF: a low-cost and straightforward whole blood filtration method suitable for whole-genome sequencing of Plasmodium falciparum clinical isolates.
Malaria Journal 2022, 21, 51.

Bouzayene A, Zaffaroullah R, Bailly J, Ciceron L, Sarrasin V, Cojean S, Argy N, Houzé S, Joste V
Evaluation of two commercial kits and two laboratory-developed qPCR assays compared to LAMP for molecular diagnosis of malaria..
Malaria journal 2022, 21, 204.

Imbard A, Toumazi A, Magréault S, Garcia-Segarra N, Schlemmer D, Kaguelidou F, Perronneau I, Haignere J, de Baulny HO, Kuster A, Feillet F, Alberti C, Guilmin-Crépon S, Benoist JF, Schiff M
Efficacy and pharmacokinetics of betaine in CBS and cblC deficiencies: a cross-over randomized controlled trial.
Orphanet Journal of Rare Diseases 2022, 17, 417.

Le Terrier C, Sigaud F, Lebbah S, Desmedt L, Hajage D, Guérin C, Pugin J, Primmaz S, Terzi N
Early prone positioning in acute respiratory distress syndrome related to COVID-19: a propensity score analysis from the multicentric cohort COVID-ICU network-the ProneCOVID study..
Critical care (London, England) 2022, 26, 71.

Roca O, Caritg O, Santafé M, Ramos FJ, Pacheco A, García-de-Acilu M, Ferrer R, Schultz MJ, Ricard JD
Closed-loop oxygen control improves oxygen therapy in acute hypoxemic respiratory failure patients under high flow nasal oxygen: a randomized cross-over study (the HILOOP study).
Critical Care (London, England) 2022, 26, 108.

Thouy F, Bohé J, Souweine B, Abidi H, Quenot JP, Thiollière F, Dellamonica J, Preiser JC, Timsit JF, Brunot V, Klich A, Sedillot N, Tchenio X, Roudaut JB, Mottard N, Hyvernat H, Wallet F, Danin PE, Badie J, Jospe R, Morel J, Mofredj A, Fatah A, Drai J, Mialon A, Ait Hssain A, Lautrette A, Fontaine E, Vacheron CH, Maucort-Boulch D, Klouche K, Dupuis C
Impact of prolonged requirement for insulin on 90-day mortality in critically ill patients without previous diabetic treatments: a post hoc analysis of the CONTROLING randomized control trial.
Critical Care (London, England) 2022, 26, 138.

Iachkine J, Buetti N, de Grooth HJ, Briant AR, Mimoz O, Mégarbane B, Mira JP, Ruckly S, Souweine B, du Cheyron D, Mermel LA, Timsit JF, Parienti JJ
Development and validation of a multivariable prediction model of central venous catheter-tip colonization in a cohort of five randomized trials.
Critical Care (London, England) 2022, 26, 205.

Walter T, Zucman N, Mullaert J, Thiry I, Gernez C, Roux D, Ricard JD
Extended prone positioning duration for COVID-19-related ARDS: benefits and detriments.
Critical Care (London, England) 2022, 26, 208.

Zampieri FG, da Costa BR, Vaara ST, Lamontagne F, Rochwerg B, Nichol AD, McGuinness S, McAuley DF, Ostermann M, Wald R, Bagshaw SM
A Bayesian reanalysis of the Standard versus Accelerated Initiation of Renal-Replacement Therapy in Acute Kidney Injury (STARRT-AKI) trial..
Critical care (London, England) 2022, 26, 255.

Reyes LF, Murthy S, Garcia-Gallo E, Merson L, Ibáñez-Prada ED, Rello J, Fuentes YV, Martin-Loeches I, Bozza F, Duque S, Taccone FS, Fowler RA, Kartsonaki C, Gonçalves BP, Citarella BW, Aryal D, Burhan E, Cummings MJ, Delmas C, Diaz R, Figueiredo-Mello C, Hashmi M, Panda PK, Jiménez MP, Rincon DFB, Thomson D, Nichol A, Marshall JC, Olliaro PL, ISARIC Characterization Group
Respiratory support in patients with severe COVID-19 in the International Severe Acute Respiratory and Emerging Infection (ISARIC) COVID-19 study: a prospective, multinational, observational study.
Critical Care (London, England) 2022, 26, 276.

Patrier J, Villageois-Tran K, Szychowiak P, Ruckly S, Gschwind R, Wicky PH, Gueye S, Armand-Lefevre L, Marzouk M, Sonneville R, Bouadma L, Petitjean M, Lamara F, de Montmollin E, Timsit JF, Ruppé E, French COVID Cohort Study Group
Oropharyngeal and intestinal concentrations of opportunistic pathogens are independently associated with death of SARS-CoV-2 critically ill adults.
Critical Care (London, England) 2022, 26, 300.

Buetti N, Tabah A, Loiodice A, Ruckly S, Aslan AT, Montrucchio G, Cortegiani A, Saltoglu N, Kayaaslan B, Aksoy F, Murat A, Akdoğan Ö, Saracoglu KT, Erdogan C, Leone M, Ferrer R, Paiva JA, Hayashi Y, Ramanan M, Conway Morris A, Barbier F, Timsit JF, Eurobact 2 study group
Different epidemiology of bloodstream infections in COVID-19 compared to non-COVID-19 critically ill patients: a descriptive analysis of the Eurobact II study.
Critical Care (London, England) 2022, 26, 319.

Blet A, McNeil JB, Josse J, Cholley B, Cinotti R, Cotter G, Dauvergne A, Davison B, Duarte K, Duranteau J, Fournier MC, Gayat E, Jaber S, Lasocki S, Merkling T, Peoc'h K, Mayer I, Sadoune M, Laterre PF, Sonneville R, Ware L, Mebazaa A, Kimmoun A
Association between in-ICU red blood cells transfusion and 1-year mortality in ICU survivors.
Critical Care (London, England) 2022, 26, 307.

Kollef MH, Timsit JF, Martin-Loeches I, Wunderink RG, Huntington JA, Jensen EH, Yu B, Bruno CJ
Outcomes in participants with failure of initial antibacterial therapy for hospital-acquired/ventilator-associated bacterial pneumonia prior to enrollment in the randomized, controlled phase 3 ASPECT-NP trial of ceftolozane/tazobactam versus meropenem.
Critical Care (London, England) 2022, 26, 373.

Soum E, Timsit JF, Ruckly S, Gruson D, Canet E, Klouche K, Argaud L, Garrouste-Orgeas M, Mariat C, Vincent F, Cayot S, Darmon M, Bohé J, Schwebel C, Bouadma L, Dupuis C, Souweine B, Lautrette A
Predictive factors for severe long-term chronic kidney disease after acute kidney injury requiring renal replacement therapy in critically ill patients: an ancillary study of the ELVIS randomized controlled trial.
Critical Care (London, England) 2022, 26, 367.

Guédon G, Lao J, Payot S, Lacroix T, Chiapello H, Leblond-Bourget N
FirmiData: a set of 40 genomes of Firmicutes with a curated annotation of ICEs and IMEs.
BMC research notes 2022, 15, 157.

Goletto T, Decaux S, Bunel V, Weisenburger G, Messika J, Najem S, Medraoui C, Godet C, Debray MP, Lortat-Jacob B, Mordant P, Castier Y, Bouadma L, Borie R, Mal H
Acute worsening of native lung fibrosis after single lung transplantation for pulmonary fibrosis: two case reports.
Journal of Medical Case Reports 2022, 16, 2.

Ghazali DA, Kenway P, Choquet C, Casalino E
Early diagnosis of sepsis using an E-health application for a clinical early warning system outside of the intensive care unit: a case report.
Journal of Medical Case Reports 2022, 16, 185.

Szychowiak P, Villageois-Tran K, Patrier J, Timsit JF, Ruppé É
The role of the microbiota in the management of intensive care patients.
Annals of Intensive Care 2022, 12, 3.

Massart N, Maxime V, Fillatre P, Razazi K, Ferré A, Moine P, Legay F, Voiriot G, Amara M, Santi F, Nseir S, Marque-Juillet S, Bounab R, Barbarot N, Bruneel F, Luyt CE, COVID ICU Bacteremia Study Group on behalf of the COVID-ICU Investigators
Correction to: Characteristics and prognosis of bloodstream infection in patients with COVID‑19 admitted in the ICU: an ancillary study of the COVID‑ICU study.
Annals of Intensive Care 2022, 12, 4.

Thietart S, Boumendil A, Pateron D, Guidet B, Vallet H
Impact on 6-month outcomes of hospital trajectory in critically ill older patients: analysis of the ICE-CUB2 clinical trial..
Annals of intensive care 2022, 12, 65.

Fage N, Demiselle J, Seegers V, Merdji H, Grelon F, Mégarbane B, Anguel N, Mira JP, Dequin PF, Gergaud S, Weiss N, Legay F, Le Tulzo Y, Conrad M, Coudroy R, Gonzalez F, Guitton C, Tamion F, Tonnelier JM, Bedos JP, Van Der Linden T, Vieillard-Baron A, Mariotte E, Pradel G, Lesieur O, Ricard JD, Hervé F, Du Cheyron D, Guerin C, Mercat A, Teboul JL, Radermacher P, Asfar P
Effects of mean arterial pressure target on mottling and arterial lactate normalization in patients with septic shock: a post hoc analysis of the SEPSISPAM randomized trial.
Annals of Intensive Care 2022, 12, 78.

Egea A, Dupuis C, de Montmollin E, Wicky PH, Patrier J, Jaquet P, Lefèvre L, Sinnah F, Marzouk M, Sonneville R, Bouadma L, Souweine B, Timsit JF
Augmented renal clearance in the ICU: estimation, incidence, risk factors and consequences-a retrospective observational study.
Annals of Intensive Care 2022, 12, 88.

Rambaud T, de Montmollin E, Jaquet P, Gaudemer A, Mariotte E, Abid S, Para M, Cimadevilla C, Iung B, Duval X, Wolff M, Bouadma L, Timsit JF, Sonneville R
Cerebrovascular complications and outcomes of critically ill adult patients with infective endocarditis.
Annals of Intensive Care 2022, 12, 119.

Windsor C, Hua C, De Roux Q, Harrois A, Anguel N, Montravers P, Vieillard-Baron A, Mira JP, Urbina T, Gaudry S, Turpin M, Damoisel C, Annane D, Ricard JD, Hersant B, Mekontso Dessap A, Chosidow O, Layese R, de Prost N, AP-HP NSTI study group
Healthcare trajectory of critically ill patients with necrotizing soft tissue infections: a multicenter retrospective cohort study using the clinical data warehouse of Greater Paris University Hospitals.
Annals of Intensive Care 2022, 12, 115.

Ravalihasy A, Kardaś-Słoma L, Yazdanpanah Y, Ridde V
Quantitative methods used to evaluate impact of health promotion interventions to prevent HIV infections: a methodological systematic review protocol.
Systematic Reviews 2022, 11, 87.

Eyebe S, Nana-Djeunga HC, Guewo-Fokeng M, Wafeu GS, Vouking MZ, Massoda S, Evina CD, Zoumabo AC, Ongolo-Zogo P, Zahar JR
Risk factors for colonization and infection with multidrug-resistant Pseudomonas aeruginosa in intensive care unit: protocol for a systematic review and meta-analysis.
Systematic Reviews 2022, 11, 270.

Berthod D, Alvarez D, Perozziello A, Chabrol F, Lucet JC
Are there reasons behind high Handrub consumption? A French National in-depth qualitative assessment.
Antimicrobial Resistance and Infection Control 2022, 11, 42.

Contejean A, Abbara S, Chentouh R, Alviset S, Grignano E, Gastli N, Casetta A, Willems L, Canouï E, Charlier C, Pène F, Charpentier J, Reboul-Marty J, Batista R, Bouscary D, Kernéis S
Antimicrobial stewardship in high-risk febrile neutropenia patients.
Antimicrobial Resistance and Infection Control 2022, 11, 52.

Kardaś-Słoma L, Fournier S, Dupont JC, Rochaix L, Birgand G, Zahar JR, Lescure FX, Kernéis S, Durand-Zaleski I, Lucet JC
Cost-effectiveness of strategies to control the spread of carbapenemase-producing Enterobacterales in hospitals: a modelling study.
Antimicrobial Resistance and Infection Control 2022, 11, 117.

Durand C, Douriez E, Chappuis A, Poulain F, Yazdanpanah Y, Lariven S, Lescure FX, Peiffer-Smadja N
Contributions and challenges of community pharmacists during the COVID-19 pandemic: a qualitative study.
Journal of Pharmaceutical Policy and Practice 2022, 15, 43.

Girod M, Dalle S, Mortier L, Dalac S, Leccia MT, Dutriaux C, Montaudié H, de Quatrebarbes J, Lesimple T, Brunet-Possenti F, Saiag P, Maubec E, Legoupil D, Stoebner PE, Arnault JP, Lefevre W, Lebbe C, Dereure O
Non-V600E/K BRAF Mutations in Metastatic Melanoma: Molecular Description, Frequency, and Effectiveness of Targeted Therapy in a Large National Cohort.
JCO precision oncology 2022, 6, e2200075.

Denamur E, Condamine B, Esposito-Farèse M, Royer G, Clermont O, Laouenan C, Lefort A, de Lastours V, Galardini M, COLIBAFI, SEPTICOLI groups
Genome wide association study of Escherichia coli bloodstream infection isolates identifies genetic determinants for the portal of entry but not fatal outcome.
PLoS genetics 2022, 18, e1010112.

Kherabi Y, Mollo B, Gerard S, Lescure FX, Rioux C, Yazdanpanah Y
Patient-centered approach to the management of drug-resistant tuberculosis in France: How far off the mark are we?.
PLOS global public health 2022, 2, e0000313.

Nijman RG, Honeyford K, Farrugia R, Rose K, Bognar Z, Buonsenso D, Da Dalt L, De T, Maconochie IK, Parri N, Roland D, Alfven T, Aupiais C, Barrett M, Basmaci R, Borensztajn D, Castanhinha S, Vasilico C, Durnin S, Fitzpatrick P, Fodor L, Gomez B, Greber-Platzer S, Guedj R, Hartshorn S, Hey F, Jankauskaite L, Kohlfuerst D, Kolnik M, Lyttle MD, Mação P, Mascarenhas MI, Messahel S, Özkan EA, Pučuka Z, Reis S, Rybak A, Ryd Rinder M, Teksam O, Turan C, Thors VS, Velasco R, Bressan S, Moll HA, Oostenbrink R, Titomanlio L, in association with the REPEM network (Research in European Pediatric Emergency Medicine) as part of the EPISODES study group
Presentations of children to emergency departments across Europe and the COVID-19 pandemic: A multinational observational study.
PLoS medicine 2022, 19, e1003974.

Belhadi D, El Baied M, Mulier G, Malvy D, Mentré F, Laouénan C
The number of cases, mortality and treatments of viral hemorrhagic fevers: A systematic review.
PLoS neglected tropical diseases 2022, 16, e0010889.

Béraud G, Timsit JF, Leleu H
Remdesivir and dexamethasone as tools to relieve hospital care systems stressed by COVID-19: A modelling study on bed resources and budget impact.
PloS One 2022, 17, e0262462.

Egloff C, Couffignal C, Cordier AG, Deruelle P, Sibiude J, Anselem O, Benachi A, Luton D, Mandelbrot L, Vauloup-Fellous C, Vivanti AJ, Picone O
Pregnant women's perceptions of the COVID-19 vaccine: A French survey.
PloS One 2022, 17, e0263512.

Flahault C, Vioulac C, Fasse L, Bailly S, Timsit JF, Garrouste-Orgeas M
"A story with gaps": An interpretative phenomenological analysis of ICU survivors' experience.
PloS One 2022, 17, e0264310.

Grandjean D, Elie C, Gallet C, Julien C, Roger V, Desquilbet L, Alvergnat G, Delarue S, Gabassi A, Minier M, Choupeaux L, Kerneis S, Delaugerre C, LE Goff J, Treluyer JM
Diagnostic accuracy of non-invasive detection of SARS-CoV-2 infection by canine olfaction.
PloS One 2022, 17, e0268382.

Habib A, Lo S, Villageois-Tran K, Petitjean M, Malik SA, Armand-Lefèvre L, Ruppé E, Zahra R
Dissemination of carbapenemase-producing Enterobacterales in the community of Rawalpindi, Pakistan.
PloS One 2022, 17, e0270707.

Tanaka S, De Tymowski C, Stern J, Bouzid D, Zappella N, Snauwaert A, Robert T, Lortat-Jacob B, Tran-Dinh A, Augustin P, Boutten A, Tashk P, Peoc'h K, Meilhac O, Montravers P
Relationship between liver dysfunction, lipoprotein concentration and mortality during sepsis.
PloS One 2022, 17, e0272352.

Sawers L, Wallon M, Mandelbrot L, Villena I, Stillwaggon E, Kieffer F
Prevention of congenital toxoplasmosis in France using prenatal screening: A decision-analytic economic model.
PloS One 2022, 17, e0273781.

Dewez JE, Pembrey L, Nijman RG, Del Torso S, Grossman Z, Hadjipanayis A, Van Esso D, Lim E, Emonts M, Burns J, Gras-LeGuen C, Kohlfuerst D, Dornbusch HJ, Brengel-Pesce K, Mallet F, von Both U, Tsolia M, Eleftheriou I, Zavadska D, de Groot R, van der Flier M, Moll H, Hagedoorn N, Borensztajn D, Oostenbrink R, Kuijpers T, Pokorn M, Vincek K, Martinón-Torres F, Rivero I, Agyeman P, Carrol ED, Paulus S, Cunnington A, Herberg J, Levin M, Mujkić A, Geitmann K, Da Dalt L, Valiulis A, Lapatto R, Syridou G, Altorjai P, Torpiano P, Størdal K, Illy K, Mazur A, Spreitzer MV, Rios J, Wyder C, Romankevych I, Basmaci R, Ibanez-Mico S, Yeung S
Availability and use of rapid diagnostic tests for the management of acute childhood infections in Europe: A cross-sectional survey of paediatricians.
PloS One 2022, 17, e0275336.

Angriman F, Ferreyro BL, Angeloni N, da Costa BR, Wald R, Bagshaw SM, Adhikari NKJ
The Effect of an Accelerated Renal Replacement Therapy Initiation Is Not Modified by Baseline Risk..
Annals of the American Thoracic Society 2022, 19, 1613-1618.

Vaittinada Ayar P, Taillé C, Vaittinada Ayar P, Gay M, Diallo A, Dara AF, Peyrony O, Chassany O, Casalino E
Assessment of Predictor Factors Associated with Multiple Emergency Department Attendance with Asthma Attack: A Qualitative and Multicentric Prospective Observational Study.
Journal of Asthma and Allergy 2022, 15, 303-313.

Gérardin C, Mageau A, Mékinian A, Tannier X, Carrat F
Construction of Cohorts of Similar Patients From Automatic Extraction of Medical Concepts: Phenotype Extraction Study.
JMIR medical informatics 2022, 10, e42379.

Bouiller K, Peiffer-Smadja N, Cevik M, Last K, Antunović IA, Šterbenc A, Lopes MJ, Barac A, Schweitzer V, Dellière S
Role and perception of clinical microbiology and infectious diseases trainees during the COVID-19 crisis.
Future Microbiology 2022, 17, 411-416.

Rapin A, Boyer FC, Mourvillier B, Giordano Orsini G, Launois C, Taiar R, Deslee G, Goury A, Carazo-Mendez S
Post-Intensive Care Syndrome Prevalence Six Months after Critical Covid-19: Comparison between First and Second Waves.
Journal of Rehabilitation Medicine 2022, 54, jrm00339.

Visci G, Zunarelli C, Mansour I, Porru S, De Palma G, Duval X, Monaco MGL, Spiteri G, Carta A, Lippi G, Verlato G, Sansone E, Sala E, Lombardo M, Abedini M, Violante F, Boffetta P
Serological response after SARS-CoV2 vaccination in healthcare workers: a multicenter study.
La Medicina Del Lavoro 2022, 113, e2022022.

Viriot D, Lucas E, de Barbeyrac B, Bébéar C, Fouéré S, Dupin N, Bertolotti A, Berçot B, Cazanave C, Delmas G, Pillonel J, Lot F, Ngangro NN
Use of healthcare reimbursement data to monitor bacterial sexually transmitted infection testing in France, 2006 to 2020.
Euro Surveillance: Bulletin Europeen Sur Les Maladies Transmissibles = European Communicable Disease Bulletin 2022, 27,

Piezzi V, Wassilew N, Atkinson A, D'Incau S, Kaspar T, Seth-Smith HM, Casanova C, Bittel P, Jent P, Sommerstein R, Buetti N, Marschall J
Nosocomial outbreak of vancomycin-resistant Enterococcus faecium (VRE) ST796, Switzerland, 2017 to 2020.
Euro Surveillance: Bulletin Europeen Sur Les Maladies Transmissibles = European Communicable Disease Bulletin 2022, 27, 2200285.

Jordans CCE, Vasylyev M, Rae C, Jakobsen ML, Vassilenko A, Dauby N, Grevsen AL, Jakobsen SF, Raahauge A, Champenois K, Papot E, Malin JJ, Boender TS, Behrens GMN, Gruell H, Neumann A, Spinner CD, Valbert F, Akinosoglou K, Kostaki EG, Nozza S, Giacomelli A, Lapadula G, Mazzitelli M, Torti C, Matulionyte R, Matulyte E, Van Welzen BJ, Hensley KS, Thompson M, Ankiersztejn-Bartczak M, Skrzat-Klapaczyńska A, Săndulescu O, Streinu-Cercel A, Streinu-Cercel A, Miron VD, Pokrovskaya A, Hachfeld A, Dorokhina A, Sukach M, Lord E, Sullivan AK, Rokx C, Guidelines Review Group for the projects: Optimising testing and linkage to care for HIV across Europe (OptTEST by HiE) and the Joint Action on integrating prevention, testing and linkage to care strategies across HIV, viral hepatitis, TB and STIs in Euro
National medical specialty guidelines of HIV indicator conditions in Europe lack adequate HIV testing recommendations: a systematic guideline review.
Euro Surveillance: Bulletin Europeen Sur Les Maladies Transmissibles = European Communicable Disease Bulletin 2022, 27, 2200338.

Berçot B, Caméléna F, Mérimèche M, Jacobsson S, Sbaa G, Mainardis M, Valin C, Molina JM, Bébéar C, Chazelle E, Lot F, Golparian D, Unemo M
Ceftriaxone-resistant, multidrug-resistant Neisseria gonorrhoeae with a novel mosaic penA-237.001 gene, France, June 2022..
Euro surveillance : bulletin Europeen sur les maladies transmissibles = European communicable disease bulletin 2022, 27,

Alizon S, Selinger C, Sofonea MT, Haim-Boukobza S, Giannoli JM, Ninove L, Pillet S, Thibault V, de Rougemont A, Tumiotto C, Solis M, Stephan R, Bressollette-Bodin C, Salmona M, L'Honneur AS, Behillil S, Lefeuvre C, Dina J, Hantz S, Hartard C, Veyer D, Delagrèverie HM, Fourati S, Visseaux B, Henquell C, Lina B, Foulongne V, Burrel S, SFM COVID-19 study group
Epidemiological and clinical insights from SARS-CoV-2 RT-PCR crossing threshold values, France, January to November 2020.
Euro Surveillance: Bulletin Europeen Sur Les Maladies Transmissibles = European Communicable Disease Bulletin 2022, 27,

Daniau C, Lecorche E, Mougari F, Benmansour H, Bernet C, Blanchard H, Robert J, Berger-Carbonne A, Cambau E
Association of Healthcare and Aesthetic Procedures with Infections Caused by Nontuberculous Mycobacteria, France, 2012‒2020.
Emerging Infectious Diseases 2022, 28, 518-526.

Daniau C, Berger-Carbonne A, Cambau E
Association of Healthcare and Aesthetic Procedures with Infections Caused by Nontuberculous Mycobacteria, France, 2012‒2020.
Emerging Infectious Diseases 2022, 28, 1303-1304.

Shirreff G, Zahar JR, Cauchemez S, Temime L, Opatowski L, EMEA-MESuRS Working Group on the Nosocomial Modelling of SARS-CoV-22
Measuring Basic Reproduction Number to Assess Effects of Nonpharmaceutical Interventions on Nosocomial SARS-CoV-2 Transmission.
Emerging Infectious Diseases 2022, 28, 1345-1354.

Kherabi Y, Fréchet-Jachym M, Rioux C, Yazdanpanah Y, Méchaï F, Pourcher V, Robert J, Guglielmetti L, MDR-TB Management Group
Revised Definitions of Tuberculosis Resistance and Treatment Outcomes, France, 2006-2019.
Emerging Infectious Diseases 2022, 28, 1796-1804.

Hobson CA, Vigué L, Magnan M, Chassaing B, Naimi S, Gachet B, Claraz P, Storme T, Bonacorsi S, Tenaillon O, Birgy A
A Microbiota-Dependent Response to Anticancer Treatment in an In Vitro Human Microbiota Model: A Pilot Study With Hydroxycarbamide and Daunorubicin.
Frontiers in Cellular and Infection Microbiology 2022, 12, 886447.

Lebourgeois S, David A, Chenane HR, Granger V, Menidjel R, Fidouh N, Noël B, Delelis O, Richetta C, Charpentier C, Chollet-Martin S, Descamps D, Visseaux B, de Chaisemartin L
Differential activation of human neutrophils by SARS-CoV-2 variants of concern.
Frontiers in Immunology 2022, 13, 1010140.

Lefèvre B, Legoff A, Boutrou M, Goehringer F, Ngueyon-Sime W, Chirouze C, Revest M, Vernet Garnier V, Duval X, Delahaye F, Le Moing V, Selton-Suty C, Filippetti L, Hoen B, Agrinier N
Staphylococcus aureus endocarditis: Identifying prognostic factors using a method derived from morbidity and mortality conferences.
Frontiers in Medicine 2022, 9, 1053278.

Hawkins-Villarreal A, Moreno-Espinosa AL, Martinez-Portilla RJ, Castillo K, Hahner N, Nakaki A, Trigo L, Picone O, Siauve N, Figueras F, Nadal A, Eixarch E, Goncé A
Fetal Liver Volume Assessment Using Magnetic Resonance Imaging in Fetuses With Cytomegalovirus Infection†.
Frontiers in Medicine 2022, 9, 889976.

d'Humières C, Gaïa N, Gueye S, de Lastours V, Leflon-Guibout V, Maataoui N, Duprilot M, Lecronier M, Rousseau MA, Gamany N, Lescure FX, Senard O, Deconinck L, Dollat M, Isernia V, Le Hur AC, Petitjean M, Nazimoudine A, Le Gac S, Chalal S, Ferreira S, Lazarevic V, Guigon G, Gervasi G, Armand-Lefèvre L, Schrenzel J, Ruppé E
Contribution of Clinical Metagenomics to the Diagnosis of Bone and Joint Infections.
Frontiers in Microbiology 2022, 13, 863777.

Choufa C, Tidjani AR, Gauthier A, Harb M, Lao J, Leblond-Bourget N, Vos M, Leblond P, Bontemps C
Prevalence and mobility of integrative and conjugative elements within a Streptomyces natural population.
Frontiers in Microbiology 2022, 13, 970179.

Delafoy M, Goutines J, Fourmont AM, Birgy A, Chomton M, Levy M, Naudin J, Zafrani L, Le Mouel L, Yakouben K, Cointe A, Caseris M, Lafaurie M, Bonacorsi S, Mechinaud F, Pereyre S, Boissel N, Baruchel A
Case Report: Hyperammonemic Encephalopathy Linked to Ureaplasma spp. and/or Mycoplasma hominis Systemic Infection in Patients Treated for Leukemia, an Emergency Not to Be Missed.
Frontiers in Oncology 2022, 12, 912695.

Rybak A, Ouldali N, Angoulvant F, Minodier P, Biscardi S, Madhi F, Hau I, Santos A, Bouvy E, Dubos F, Martinot A, Dommergues MA, Gras-Le Guen C, Launay E, Levieux K, Zenkhri F, Craiu I, Lorrot M, Gillet Y, Mezgueldi E, Faye A, Béchet S, Varon E, Cohen R, Levy C
Shift in Clinical Profile of Hospitalized Pneumonia in Children in the Non-pharmaceutical Interventions Period During the COVID-19 Pandemic: A Prospective Multicenter Study.
Frontiers in Pediatrics 2022, 10, 782894.

Rybak A, Varon E, Masson E, Etchevers A, Levy-Brühl D, Ouldali N, Levy C, Cohen R
Investigation of Concurrent Pneumococcal Meningitis in Two Children Attending the Same Day-Care Center.
Frontiers in Pediatrics 2022, 10, 945767.

Alcouffe L, Huber F, Creton PM, Bitan L, Gonzalez A, Volpellier M, Panfili B, Adenis A, Vignier N
Sexual vulnerability of migrant women in the multicultural context of French Guiana: A societal issue.
Frontiers in Public Health 2022, 10, 934049.

Vignier N, Moussaoui S, Marsaudon A, Wittwer J, Jusot F, Dourgnon P
Burden of infectious diseases among undocumented migrants in France: Results of the Premiers Pas survey.
Frontiers in Public Health 2022, 10, 934050.

Goupil de Bouillé J, Luong Nguyen LB, Crépey P, Garlantezec R, Doré V, Dumas A, Ben Mechlia M, Tattevin P, Gaudart J, Spire B, Lert F, Yazdanpanah Y, Delaugerre C, Noret M, Zeggagh J
Transmission of SARS-CoV-2 during indoor clubbing events: A clustered randomized, controlled, multicentre trial protocol.
Frontiers in Public Health 2022, 10, 981213.

Saliba R, Mizrahi A, Gauthier PdP, Alban LM, Zahar JR, Pilmis B
Antimicrobial Stewardship Program: Reducing Antibiotic's Spectrum of Activity Is not the Solution to Limit the Emergence of Multidrug-Resistant Bacteria.
Antibiotics (Basel, Switzerland) 2022, 11, 70.

Timsit JF, Wicky PH, de Montmollin E
Treatment of Severe Infections Due to Metallo-Betalactamases Enterobacterales in Critically Ill Patients.
Antibiotics (Basel, Switzerland) 2022, 11, 144.

Chaïbi K, Péan de Ponfilly G, Dortet L, Zahar JR, Pilmis B
Empiric Treatment in HAP/VAP: "Don't You Want to Take a Leap of Faith?".
Antibiotics (Basel, Switzerland) 2022, 11, 359.

Tabah A, Lipman J, Barbier F, Buetti N, Timsit JF, On Behalf Of The Escmid Study Group For Infections In Critically Ill Patients-Esgcip n
Use of Antimicrobials for Bloodstream Infections in the Intensive Care Unit, a Clinically Oriented Review.
Antibiotics (Basel, Switzerland) 2022, 11, 362.

Durand C, Alfandari S, Béraud G, Tsopra R, Lescure FX, Peiffer-Smadja N
Clinical Decision Support Systems for Antibiotic Prescribing: An Inventory of Current French Language Tools.
Antibiotics (Basel, Switzerland) 2022, 11, 384.

Birgy A, Magnan M, Hobson CA, Figliuzzi M, Panigoni K, Codde C, Tenaillon O, Jacquier H
Local and Global Protein Interactions Contribute to Residue Entrenchment in Beta-Lactamase TEM-1.
Antibiotics (Basel, Switzerland) 2022, 11, 652.

de Montmollin E, Peoc'h K, Marzouk M, Ruckly S, Wicky PH, Patrier J, Jaquet P, Sonneville R, Bouadma L, Timsit JF
Mid-Regional Pro-Adrenomedullin as a Prognostic Factor for Severe COVID-19 ARDS.
Antibiotics (Basel, Switzerland) 2022, 11, 1166.

Tran-Dinh A, Guiot M, Tanaka S, Lortat-Jacob B, Atchade E, Zappella N, Mordant P, Castier Y, Mal H, Weisenburger G, Messika J, Grall N, Montravers P
Bacteraemia Is Associated with Increased ICU Mortality in the Postoperative Course of Lung Transplantation.
Antibiotics (Basel, Switzerland) 2022, 11, 1405.

Mimram L, Magréault S, Kerroumi Y, Salmon D, Kably B, Marmor S, Jannot AS, Jullien V, Zeller V
Population Pharmacokinetics of Orally Administered Clindamycin to Treat Prosthetic Joint Infections: A Prospective Study.
Antibiotics (Basel, Switzerland) 2022, 11, 1462.

Pajot O, Lakhal K, Lambert J, Gros A, Bruel C, Boulain T, Garot D, Das V, Timsit JF, Cerf C, Souweine B, Chaffaut C, Mentec H, Zahar JR, Mira JP, Jullien V
Empirical Antibiotic Therapy for Gram-Negative Bacilli Ventilator-Associated Pneumonia: Observational Study and Pharmacodynamic Assessment.
Antibiotics (Basel, Switzerland) 2022, 11, 1664.

Magréault S, Jauréguy F, Carbonnelle E, Zahar JR
When and How to Use MIC in Clinical Practice?.
Antibiotics (Basel, Switzerland) 2022, 11, 1748.

Hansen SS, Pedersen TM, Marin J, Boardman NT, Shah AM, Aasum E, Hafstad AD
Overexpression of NOX2 Exacerbates AngII-Mediated Cardiac Dysfunction and Metabolic Remodelling.
Antioxidants (Basel, Switzerland) 2022, 11, 143.

Marin J, Journe F, Ghanem GE, Awada A, Kindt N
Cytokine Landscape in Central Nervous System Metastases..
Biomedicines 2022, 10,

Delhommeau G, Buetti N, Neuville M, Siami S, Cohen Y, Laurent V, Mourvillier B, Reignier J, Goldgran-Toledano D, Schwebel C, Ruckly S, de Montmollin E, Souweine B, Timsit JF, Dupuis C
Bacterial Pulmonary Co-Infections on ICU Admission: Comparison in Patients with SARS-CoV-2 and Influenza Acute Respiratory Failure: A Multicentre Cohort Study.
Biomedicines 2022, 10, 2646.

Ngono Ayissi K, Gorwood J, Le Pelletier L, Bourgeois C, Beaupère C, Auclair M, Foresti R, Motterlini R, Atlan M, Barrail-Tran A, Le Grand R, Desjardins D, Fève B, Lambotte O, Capeau J, Béréziat V, Lagathu C
Inhibition of Adipose Tissue Beiging by HIV Integrase Inhibitors, Dolutegravir and Bictegravir, Is Associated with Adipocyte Hypertrophy, Hypoxia, Elevated Fibrosis, and Insulin Resistance in Simian Adipose Tissue and Human Adipocytes.
Cells 2022, 11, 1841.

Mausoléo A, Olivo A, Desjardins D, Sáez-Cirión A, Barrail-Tran A, Avettand-Fenoel V, Noël N, Lagathu C, Béréziat V, Le Grand R, Lambotte O, Bourgeois C
Prolonged Antiretroviral Treatment Induces Adipose Tissue Remodelling Associated with Mild Inflammation in SIV-Infected Macaques.
Cells 2022, 11, 3104.

Kandel M, Bardet A, Dalle S, Allayous C, Mortier L, Guillot B, Dutriaux C, Leccia MT, Dalac S, Montaudie H, Saiag P, Legoupil D, Brunet-Possenti F, Arnault JP, Quatrebarbes JD, Beylot-Barry M, Maubec E, Lesimple T, Aubin F, Grob JJ, Granel-Brocard F, Stoebner PE, Dupuy A, Dreno B, Michiels S, Lebbe C, Borget I
Cost-Effectiveness Analysis of Sequential Treatment Strategies for Advanced Melanoma in Real Life in France.
Current Oncology (Toronto, Ont.) 2022, 29, 9255-9270.

Senelle G, Guyeux C, Refrégier G, Sola C
Investigating the Diversity of Tuberculosis Spoligotypes with Dimensionality Reduction and Graph Theory.
Genes 2022, 13, 2328.

Ousseine YM, Vaux S, Vandentorren S, Bonmarin I, Champenois K, Lydié N, Velter A
Predictors of Uncertainty and Unwillingness to Receive the COVID-19 Vaccine in Men Who Have Sex with Men in France.
International Journal of Environmental Research and Public Health 2022, 19, 5372.

Arnaud E, Elbattah M, Ammirati C, Dequen G, Ghazali DA
Use of Artificial Intelligence to Manage Patient Flow in Emergency Department during the COVID-19 Pandemic: A Prospective, Single-Center Study.
International Journal of Environmental Research and Public Health 2022, 19, 9667.

Zerbit J, Detroit M, Chevret S, Pene F, Luyt CE, Ghosn J, Eyvrard F, Martin-Blondel G, Sarton B, Clere-Jehl R, Moine P, Cransac A, Andreu P, Labruyère M, Albertini L, Huon JF, Roge P, Bernard L, Farines-Raffoul M, Villiet M, Venet A, Dumont LM, Kaiser JD, Chapuis C, Goehringer F, Barbier F, Desjardins S, Benzidi Y, Abbas N, Guerin C, Batista R, Llitjos JF, Kroemer M
Remdesivir for Patients Hospitalized with COVID-19 Severe Pneumonia: A National Cohort Study (Remdeco-19).
Journal of Clinical Medicine 2022, 11, 6545.

Portefaix A, Pons S, Ouziel A, Basmaci R, Rebaud P, Delafay MC, Generenaz L, Oriol G, Meunier B, Abbas-Chorfa F, Trouillet-Assant S, Ginhoux T, Subtil F, Gillet Y, Brengel-Pesce K, Javouhey E
Performance Evaluation of Host Biomarker Combinations for the Diagnosis of Serious Bacterial Infection in Young Febrile Children: A Double-Blind, Multicentre, Observational Study.
Journal of Clinical Medicine 2022, 11, 6563.

Paccoud O, Vignier N, Boui M, Migaud M, Vironneau P, Kania R, Méchaï F, Brun S, Alanio A, Tauziède-Espariat A, Adle-Biassette H, Ouedraogo E, Bustamante J, Bouchaud O, Casanova JL, Puel A, Lanternier F
Invasive Rhinosinusitis Caused by Alternaria infectoria in a Patient with Autosomal Recessive CARD9 Deficiency and a Review of the Literature.
Journal of Fungi (Basel, Switzerland) 2022, 8, 446.

Bonnet C, Masse S, Benamar H, Vilcu AM, Swital M, Hanslik T, van der Werf S, Duval X, Carrat F, Falchi A, Blanchon T
Is the Alpha Variant of SARS-CoV-2 Associated with a Higher Viral Load than the Historical Strain in Saliva Samples in Patients with Mild to Moderate Symptoms?.
Life (Basel, Switzerland) 2022, 12, 163.

Basmaci R, Bidet P, Bonacorsi S
Kingella kingae and Viral Infections.
Microorganisms 2022, 10, 230.

I B, E H, L G, P B, L B, A B, R B, G C, E C, L E, E F, M FJ, A G, H G, B LD, Jp L, P L, A L, B L, N L, C M, P M, F M, D MO, S PD, T P, C P, V P, V Z, V Z, N V, S J, A A
Clinical Features and Outcome of Multidrug-Resistant Osteoarticular Tuberculosis: A 12-Year Case Series from France.
Microorganisms 2022, 10,

Levi G, Lurie-Weinberger M, Keren-Paz A, Andremont AO, Schwartz D, Carmeli Y
Unraveling the Diversity of Co-Colonization by CPE.
Microorganisms 2022, 10, 1292.

Billard-Pomares T, Marin J, Quagliaro P, Méchaï F, Walewski V, Dziri S, Carbonnelle E
Use of Whole-Genome Sequencing to Explore Mycobacterium tuberculosis Complex Circulating in a Hotspot Department in France.
Microorganisms 2022, 10, 1586.

Farfour E, Dortet L, Guillard T, Chatelain N, Poisson A, Mizrahi A, Fournier D, Bonnin RA, Degand N, Morand P, Janvier F, Fihman V, Corvec S, Broutin L, Le Brun C, Yin N, Héry-Arnaud G, Grillon A, Bille E, Jean-Pierre H, Amara M, Jaureguy F, Isnard C, Cattoir V, Diedrich T, Flevin E, Merens A, Jacquier H, Vasse M, On Behalf Of The Gmc Study Group n
Antimicrobial Resistance in Enterobacterales Recovered from Urinary Tract Infections in France.
Pathogens (Basel, Switzerland) 2022, 11, 356.

Garweg JG, Kieffer F, Mandelbrot L, Peyron F, Wallon M
Long-Term Outcomes in Children with Congenital Toxoplasmosis-A Systematic Review.
Pathogens (Basel, Switzerland) 2022, 11, 1187.

Gelé T, Gouget H, Dereuddre-Bosquet N, Furlan V, Le Grand R, Lambotte O, Desjardins D, Barrail-Tran A
Pharmacological Validation of Long-Term Treatment with Antiretroviral Drugs in a Model of SIV-Infected Non-Human Primates.
Pharmaceutics 2022, 14, 2282.

Fourati S, Audureau E, Arrestier R, Marot S, Dubois C, Voiriot G, Luyt CE, Urbina T, Mayaux J, Roque-Afonso AM, Pham T, Landraud L, Visseaux B, Roux D, Bellaiche R, L'honneur AS, Ait Hamou Z, Brichler S, Gaudry S, Salmona M, Clere-Jehl R, Azoulay E, Morand-Joubert L, Marcelin AG, Chaix ML, Descamps D, Mekontso Dessap A, Rodriguez C, Pawlotsky JM, de Prost N
SARS-CoV-2 Genomic Characteristics and Clinical Impact of SARS-CoV-2 Viral Diversity in Critically Ill COVID-19 Patients: A Prospective Multicenter Cohort Study.
Viruses 2022, 14, 1529.

Paillet T, Lossouarn J, Figueroa C, Midoux C, Rué O, Petit MA, Dugat-Bony E
Virulent Phages Isolated from a Smear-Ripened Cheese Are Also Detected in Reservoirs of the Cheese Factory.
Viruses 2022, 14, 1620.

Périllaud-Dubois C, Bouthry E, Mouna L, Pirin C, Vieux-Combe C, Picone O, Roque-Afonso AM, Vivanti AJ, Vauloup-Fellous C
Contribution of Serum Cytomegalovirus PCR to Diagnosis of Early CMV Primary Infection in Pregnant Women.
Viruses 2022, 14, 2137.

Périllaud-Dubois C, Letamendia E, Bouthry E, Rafek R, Thouard I, Vieux-Combe C, Picone O, Cordier AG, Vauloup-Fellous C
Cytomegalovirus Specific Serological and Molecular Markers in a Series of Pregnant Women With Cytomegalovirus Non Primary Infection.
Viruses 2022, 14, 2425.

Messeca C, Balanger M, Geoffroy F, Duval X, Samimi M, Millot S
Oral Kaposi Sarcoma in two patients living with HIV despite sustained viral suppression: New clues.
Journal of Clinical and Experimental Dentistry 2022, 14, e453-e456.

Cloitre A, Hascoët E, Iung B, Duval X, Lesclous P
Impact of cone-beam computed tomography for the identification and management of an oral portal of entry in patients with infective endocarditis. A Delphi study.
Medicina Oral, Patologia Oral Y Cirugia Bucal 2022, 27, e42-e50.

Migliori GB, Wu SJ, Matteelli A, Zenner D, Goletti D, Ahmedov S, Al-Abri S, Allen DM, Balcells ME, Garcia-Basteiro AL, Cambau E, Chaisson RE, Chee CBE, Dalcolmo MP, Denholm JT, Erkens C, Esposito S, Farnia P, Friedland JS, Graham S, Hamada Y, Harries AD, Kay AW, Kritski A, Manga S, Marais BJ, Menzies D, Ng D, Petrone L, Rendon A, Silva DR, Schaaf HS, Skrahina A, Sotgiu G, Thwaites G, Tiberi S, Tukvadze N, Zellweger JP, D Ambrosio L, Centis R, Ong CWM
Clinical standards for the diagnosis, treatment and prevention of TB infection.
The International Journal of Tuberculosis and Lung Disease: The Official Journal of the International Union Against Tuberculosis and Lung Disease 2022, 26, 190-205.

Fromentin M, Barat M, Ricard JD, Roux D
Ultrasound Guidance for Internal Jugular Vein Catheterization: Don't Forget the Basics..
Asian journal of anesthesiology 2022, 60, 41-42.

Bouzid D, Visseaux B, Kassasseya C, Daoud A, Fémy F, Hermand C, Truchot J, Beaune S, Javaud N, Peyrony O, Chauvin A, Vaittinada Ayar P, Bourg A, Riou B, Marot S, Bloom B, Cachanado M, Simon T, Freund Y, IMProving Emergency Care (IMPEC) FHU Collaborators Group
Comparison of Patients Infected With Delta Versus Omicron COVID-19 Variants Presenting to Paris Emergency Departments : A Retrospective Cohort Study.
Annals of Internal Medicine 2022, 175, 831-837.

Johnson MG, Puenpatom A, Moncada PA, Burgess L, Duke ER, Ohmagari N, Wolf T, Bassetti M, Bhagani S, Ghosn J, Zhang Y, Wan H, Williams-Diaz A, Brown ML, Paschke A, De Anda C
Effect of Molnupiravir on Biomarkers, Respiratory Interventions, and Medical Services in COVID-19 : A Randomized, Placebo-Controlled Trial.
Annals of Internal Medicine 2022, 175, 1126-1134.

Ferré VM, Bachelard A, Zaidi M, Armand-Lefevre L, Descamps D, Charpentier C, Ghosn J
Detection of Monkeypox Virus in Anorectal Swabs From Asymptomatic Men Who Have Sex With Men in a Sexually Transmitted Infection Screening Program in Paris, France.
Annals of Internal Medicine 2022, 175, 1491-1492.

Blanquart F, Hozé N, Cowling BJ, Débarre F, Cauchemez S
Selection for infectivity profiles in slow and fast epidemics, and the rise of SARS-CoV-2 variants.
eLife 2022, 11, e75791.

Wensing AM, Calvez V, Ceccherini-Silberstein F, Charpentier C, Günthard HF, Paredes R, Shafer RW, Richman DD
2022 update of the drug resistance mutations in HIV-1.
Topics in Antiviral Medicine 2022, 30, 559-574.

El Messaoudi S, Lemenuel-Diot A, Gonçalves A, Guedj J
A semi-mechanistic model to characterize the long-term dynamic of HBV markers during treatment with lamivudine and Peg-IFN.
Clinical Pharmacology & Therapeutics 2022

 2021                                                                            

Ouldali N, Toubiana J, Antona D, Javouhey E, Madhi F, Lorrot M, Léger PL, Galeotti C, Claude C, Wiedemann A, Lachaume N, Ovaert C, Dumortier M, Kahn JE, Mandelcwajg A, Percheron L, Biot B, Bordet J, Girardin ML, Yang DD, Grimaud M, Oualha M, Allali S, Bajolle F, Beyler C, Meinzer U, Levy M, Paulet AM, Levy C, Cohen R, Belot A, Angoulvant F, French Covid-19 Paediatric Inflammation Consortium
Association of Intravenous Immunoglobulins Plus Methylprednisolone vs Immunoglobulins Alone With Course of Fever in Multisystem Inflammatory Syndrome in Children.
JAMA 2021, 325, 855-864.

Russotto V, Myatra SN, Laffey JG, Tassistro E, Antolini L, Bauer P, Lascarrou JB, Szuldrzynski K, Camporota L, Pelosi P, Sorbello M, Higgs A, Greif R, Putensen C, Agvald-Öhman C, Chalkias A, Bokums K, Brewster D, Rossi E, Fumagalli R, Pesenti A, Foti G, Bellani G, INTUBE Study Investigators
Intubation Practices and Adverse Peri-intubation Events in Critically Ill Patients From 29 Countries.
JAMA 2021, 325, 1164-1172.

Hermine O, Mariette X, Tharaux PL, Resche-Rigon M, Porcher R, Ravaud P, CORIMUNO-19 Collaborative Group
Effect of Tocilizumab vs Usual Care in Adults Hospitalized With COVID-19 and Moderate or Severe Pneumonia: A Randomized Clinical Trial.
JAMA internal medicine 2021, 181, 32-40.

Sarton B, Jaquet P, Belkacemi D, de Montmollin E, Bonneville F, Sazio C, Frérou A, Conrad M, Daubin D, Chabanne R, Argaud L, Dailler F, Brulé N, Lerolle N, Maestraggi Q, Marechal J, Bailly P, Razazi K, Mateos F, Guidet B, Levrat A, Susset V, Lautrette A, Mira JP, El Kalioubie A, Robert A, Massri A, Albucher JF, Olivot JM, Conil JM, Boudma L, Timsit JF, Sonneville R, Silva S, ENCEPHALITICA Consortium
Assessment of Magnetic Resonance Imaging Changes and Functional Outcomes Among Adults With Severe Herpes Simplex Encephalitis.
JAMA network open 2021, 4, e2114328.

Birgand G, Mutters NT, Otter J, Eichel VM, Lepelletier D, Morgan DJ, Lucet JC
Variation of National and International Guidelines on Respiratory Protection for Health Care Professionals During the COVID-19 Pandemic.
JAMA network open 2021, 4, e2119257.

Cousien A, Acquaviva E, Kernéis S, Yazdanpanah Y, Delorme R
Temporal Trends in Suicide Attempts Among Children in the Decade Before and During the COVID-19 Pandemic in Paris, France.
JAMA network open 2021, 4, e2128611.

Dinh A, Duran C, Ropers J, Bouchand F, Davido B, Deconinck L, Matt M, Senard O, Lagrange A, Mellon G, Calin R, Makhloufi S, de Lastours V, Mathieu E, Kahn JE, Rouveix E, Grenet J, Dumoulin J, Chinet T, Pépin M, Delcey V, Diamantis S, Benhamou D, Vitrat V, Dombret MC, Guillemot D, Renaud B, Claessens YE, Labarère J, Aegerter P, Bedos JP, Crémieux AC, Pneumonia Short Treatment (PTC) Study Group
Factors Associated With Treatment Failure in Moderately Severe Community-Acquired Pneumonia: A Secondary Analysis of a Randomized Clinical Trial.
JAMA network open 2021, 4, e2129566.

Anquetil A, Khung Savatovsky S, Gavard L, Bazin A, Guimiot F, Dubourg C, Mandelbrot L, Picone O
Case report: Antenatal diagnostic of a polymalformative syndrome due to biallelic BRCA2 mutations.
Clinical Case Reports 2021, 9, e04838.

Pinquier JL, Varastet M, Meyers D, Sayah-Jeanne S, Féger C, Gaumétou O, Corbel T, de Gunzburg J, Mentré F, Ducher A
A Colon-Targeted Adsorbent (DAV132) Does Not Affect the Pharmacokinetics of Warfarin or Clonazepam in Healthy Subjects.
Clinical Pharmacology in Drug Development 2021, 10, 908-917.

Guk J, Guedj J, Burdet C, Andremont A, de Gunzburg J, Ducher A, Mentré F
Modeling the Effect of DAV132, a Novel Colon-Targeted Adsorbent, on Fecal Concentrations of Moxifloxacin and Gut Microbiota Diversity in Healthy Volunteers.
Clinical Pharmacology and Therapeutics 2021, 109, 1045-1054.

Bouchghoul H, Bouyer J, Senat MV, Mandelbrot L, Letourneau A, Bourcigaux N, Becquemont L, Verstuyft C
Hypoglycemia and Glycemic Control With Glyburide in Women With Gestational Diabetes and Genetic Variants of Cytochrome P450 2C9 and/or OATP1B3.
Clinical Pharmacology and Therapeutics 2021, 110, 141-148.

Mullaert J, Bouaziz M, Seeleuthner Y, Bigio B, Casanova JL, Alcaïs A, Abel L, Cobat A
Taking population stratification into account by local permutations in rare-variant association studies on small samples.
Genetic Epidemiology 2021

Atkinson A, Miro JM, Mocroft A, Reiss P, Kirk O, Morlat P, Ghosn J, Stephan C, Mussini C, Antoniadou A, Doerholt K, Girardi E, De Wit S, Kraus D, Zwahlen M, Furrer H, Opportunistic Infections Working Group of the Collaboration of Observational HIV Epidemiological Research Europe (COHERE) study in EuroCOORD
No need for secondary Pneumocystis jirovecii pneumonia prophylaxis in adult people living with HIV from Europe on ART with suppressed viraemia and a CD4 cell count greater than 100 cells/µL.
Journal of the International AIDS Society 2021, 24, e25726.

Yazdanpanah Y, French COVID cohort investigators and study group
Impact on disease mortality of clinical, biological, and virological characteristics at hospital admission and overtime in COVID-19 patients.
Journal of Medical Virology 2021, 93, 2149-2159.

Lefeuvre C, Salmona M, Bondeelle L, Houdouin V, Feghoul L, Jacquier H, Mercier-Delarue S, Bergeron A, LeGoff J
Frequent lower respiratory tract disease in hematological patients with parainfluenza virus type 3 infection.
Journal of Medical Virology 2021, 93, 6371-6376.

Roussel A, Germanaud D, Bouchoucha Y, Ouldali N, Vedrenne-Cloquet M, Castelle M, Baruchel A
Cranial polyneuropathy as the first manifestation of a severe COVID-19 in a child.
Pediatric Blood & Cancer 2021, 68, e28707.

Russo I, Levy-Gabriel C, Dupont A, Lumbroso-Le Rouic L, Cassoux N, Desjardins L, Bertozzi AI, Coze C, Doz F, Savignoni A, Aerts I
Prospective phase II study of children affected by bilateral intraocular retinoblastoma with macular involvement of both eyes or in the only preserved eye. Macular tumor control, eye preservation rate, and visual outcome.
Pediatric Blood & Cancer 2021, 68, e28721.

Couffignal C, Mentré F, Bertrand J
Impact of study design and statistical model in pharmacogenetic studies with gene-treatment interaction.
CPT: pharmacometrics & systems pharmacology 2021, 10, 340-349.

French J, Mentré F
Welcome to the statistics and pharmacometrics themed issue.
CPT: pharmacometrics & systems pharmacology 2021, 10, 273-274.

Rowland Yeo K, Hennig S, Krishnaswami S, Strydom N, Ayyar VS, French J, Sinha V, Sobie E, Zhao P, Friberg LE, Mentré F
CPT: Pharmacometrics & Systems Pharmacology - Inception, Maturation, and Future Vision.
CPT: pharmacometrics & systems pharmacology 2021, 10, 649-657.

Bauer RJ, Hooker AC, Mentre F
Tutorial for $DESIGN in NONMEM: Clinical Trial Evaluation and Optimization.
CPT: pharmacometrics & systems pharmacology 2021

Demagny J, Driss A, Stepanian A, Anguel N, Affo L, Roux D, Habibi A, Benghezal S, Capdenat S, Coppo P, Driss F, Veyradier A
ADAMTS13 and von Willebrand factor assessment in steady state and acute vaso-occlusive crisis of sickle cell disease.
Research and Practice in Thrombosis and Haemostasis 2021, 5, 197-203.

Buatois S, Ueckert S, Frey N, Retout S, Mentré F
cLRT-Mod: An efficient methodology for pharmacometric model-based analysis of longitudinal phase II dose finding studies under model uncertainty.
Statistics in Medicine 2021, 40, 2435-2451.

COVID-ICU Group on behalf of the REVA Network and the COVID-ICU Investigators
Clinical characteristics and day-90 outcomes of 4244 critically ill adults with COVID-19: a prospective cohort study.
Intensive Care Medicine 2021, 47, 60-73.

Buetti N, Souweine B, Mermel L, Mimoz O, Ruckly S, Loiodice A, Mongardon N, Lucet JC, Parienti JJ, Timsit JF
Obesity and risk of catheter-related infections in the ICU. A post hoc analysis of four large randomized controlled trials.
Intensive Care Medicine 2021, 47, 435-443.

Fromentin M, Ricard JD, Roux D
Respiratory microbiome in mechanically ventilated patients: a narrative review.
Intensive Care Medicine 2021, 47, 292-306.

Buetti N, Ruckly S, de Montmollin E, Reignier J, Terzi N, Cohen Y, Shiami S, Dupuis C, Timsit JF
COVID-19 increased the risk of ICU-acquired bloodstream infections: a case-cohort study from the multicentric OUTCOMEREA network.
Intensive Care Medicine 2021, 47, 180-187.

Arabi YM, Azoulay E, Al-Dorzi HM, Phua J, Salluh J, Binnie A, Hodgson C, Angus DC, Cecconi M, Du B, Fowler R, Gomersall CD, Horby P, Juffermans NP, Kesecioglu J, Kleinpell RM, Machado FR, Martin GS, Meyfroidt G, Rhodes A, Rowan K, Timsit JF, Vincent JL, Citerio G
How the COVID-19 pandemic will change the future of critical care.
Intensive Care Medicine 2021, 47, 282-291.

Penaud V, Roux D, Coffin B, Verney C
A Sengstaken-Blakemore tube to rescue respiratory failure due to oesophageal-pulmonary fistula.
Intensive Care Medicine 2021

Buetti N, Mimoz O, Mongardon N, Parienti JJ, Timsit JF
Ultrasound-guided catheterization and infectious risk in obese ICU patients.
Intensive Care Medicine 2021, 47, 632-634.

de Tymowski C, Dépret F, Dudoignon E, Legrand M, Mallet V, Keta-Cov Research Group
Ketamine-induced cholangiopathy in ARDS patients.
Intensive Care Medicine 2021, 47, 1173-1174.

Arabi YM, Derde LPG, Timsit JF
How COVID-19 will change the management of other respiratory viral infections.
Intensive Care Medicine 2021

Bohé J, Abidi H, Brunot V, Klich A, Klouche K, Sedillot N, Tchenio X, Quenot JP, Roudaut JB, Mottard N, Thiollière F, Dellamonica J, Wallet F, Souweine B, Lautrette A, Preiser JC, Timsit JF, Vacheron CH, Ait Hssain A, Maucort-Boulch D, CONTROLe INdividualisé de la Glycémie (CONTROLING) Study Group
Individualised versus conventional glucose control in critically-ill patients: the CONTROLING study-a randomized clinical trial.
Intensive Care Medicine 2021, 47, 1271-1283.

Boyer P, Couffignal C, Bahman M, Mylle G, Rousseau MA, Dukan R
Displaced three and four part proximal humeral fractures: prospective controlled randomized open-label two-arm study comparing intramedullary nailing and locking plate.
International Orthopaedics 2021

Debray MP, Tarabay H, Males L, Chalhoub N, Mahdjoub E, Pavlovsky T, Visseaux B, Bouzid D, Borie R, Wackenheim C, Crestani B, Rioux C, Saker L, Choquet C, Mullaert J, Khalil A
Observer agreement and clinical significance of chest CT reporting in patients suspected of COVID-19.
European Radiology 2021, 31, 1081-1089.

de Margerie-Mellon C, Debry JB, Dupont A, Cuvier C, Giacchetti S, Teixeira L, Espié M, de Bazelaire C
Nonpalpable breast lesions: impact of a second-opinion review at a breast unit on BI-RADS classification.
European Radiology 2021, 31, 5913-5923.

Chomton M, Marsac L, Deho A, Maroni A, Geslain G, Frannais-Haverland K, Robert-Debré University Hospital Study Group, Nicolas-Robin A, Levy M
Transforming a paediatric ICU to an adult ICU for severe Covid-19: lessons learned.
European Journal of Pediatrics 2021, 180, 2319-2323.

Chomton M, Marsac L, Deho A, Maroni A, Geslain G, Frannais-Haverland K, Robert-Debré University Hospital Study Group, Nicolas-Robin A, Levy M
Correction to: Transforming a paediatric ICU to an adult ICU for severe Covid-19: lessons learned.
European Journal of Pediatrics 2021

Beauplet B, Soulie O, Niemier JY, Pons-Peyneau C, Belhadi D, Couffignal C, Fossey-Diaz V
Dealing with the lack of evidence to treat depression in older patients with cancer: French Societies of Geriatric Oncology (SOFOG) and PsychoOncology (SFFPO) position paper based on a systematic review.
Supportive Care in Cancer: Official Journal of the Multinational Association of Supportive Care in Cancer 2021, 29, 563-571.

Plainvert C, Anselem O, Joubrel C, Marcou V, Falloukh A, Frigo A, Magdoud El Alaoui F, Ancel PY, Jarreau PH, Mandelbrot L, Goffinet F, Poyart C, Tazi A
Persistence of group B Streptococcus vaginal colonization and prevalence of hypervirulent CC-17 clone correlate with the country of birth: a prospective 3-month follow-up cohort study.
European Journal of Clinical Microbiology & Infectious Diseases: Official Publication of the European Society of Clinical Microbiology 2021, 40, 133-140.

Poline J, Postaire M, Parize P, Pilmis B, Bille E, Zahar JR, Frange P, Cohen JF, Lortholary O, Toubiana J
Stewardship program on carbapenem prescriptions in a tertiary hospital for adults and children in France: a cohort study.
European Journal of Clinical Microbiology & Infectious Diseases: Official Publication of the European Society of Clinical Microbiology 2021, 40, 1039-1048.

Chawki S, Sokal A, Duprilot M, Henry A, Leflon-Guibout V, Nicolas-Chanoine MH, Fantin B, de Lastours V
Temocillin as an alternative treatment for acute bacterial cholangitis: a retrospective microbiology susceptibility-based study of 140 episodes.
European Journal of Clinical Microbiology & Infectious Diseases: Official Publication of the European Society of Clinical Microbiology 2021

Ginocchio CC, Garcia-Mondragon C, Mauerhofer B, Rindlisbacher C, and the EME Evaluation Program Collaborative
Multinational evaluation of the BioFire® FilmArray® Pneumonia plus Panel as compared to standard of care testing.
European Journal of Clinical Microbiology & Infectious Diseases: Official Publication of the European Society of Clinical Microbiology 2021

Maataoui N, Chemali L, Patrier J, Tran Dinh A, Le Fèvre L, Lortat-Jacob B, Marzouk M, d'Humières C, Rondinaud E, Ruppé E, Montravers P, Timsit JF, Armand-Lefèvre L
Impact of rapid multiplex PCR on management of antibiotic therapy in COVID-19-positive patients hospitalized in intensive care unit.
European Journal of Clinical Microbiology & Infectious Diseases: Official Publication of the European Society of Clinical Microbiology 2021, 40, 2227-2234.

Vauloup-Fellous C, Maylin S, Périllaud-Dubois C, Brichler S, Alloui C, Gordien E, Rameix-Welti MA, Gault E, Moreau F, Fourati S, Challine D, Pawlotsky JM, Houhou-Fidouh N, Damond F, Mackiewicz V, Charpentier C, Méritet JF, Rozenberg F, Podglajen I, Marot S, Petit H, Burrel S, Akhavan S, Leruez-Ville M, Avettand-Fenoel V, Fourgeaud J, Guilleminot T, Gardiennet E, Bonacorsi S, Carol A, Carcelain G, Villemonteix J, Boukli N, Gozlan J, Morand-Joubert L, Legoff J, Delaugerre C, Chaix ML, Roque-Afonso AM, Dortet L, Naas T, Ronat JB, Lepape S, Marcelin AG, Descamps D
Performance of 30 commercial SARS-CoV-2 serology assays in testing symptomatic COVID-19 patients.
European Journal of Clinical Microbiology & Infectious Diseases: Official Publication of the European Society of Clinical Microbiology 2021, 40, 2235-2241.

de Ponfilly GP, Lourtet-Hascoet J, Porcheret H, Cambau E, Le Monnier A, Jacquier H, Vasse M, Farfour E
Seasonal variations in blood culture numbers and time to positivity and potential impact of reducing incubation periods..
European journal of clinical microbiology & infectious diseases : official publication of the European Society of Clinical Microbiology 2021, 40, 2087-2093.

Péan de Ponfilly G, Benmansour H, Manda V, Lecorche E, Mougari F, Munier AL, Temim S, Amarsy R, Jacquier H, Cambau E
Impact of 24/7 loading of blood culture bottles in a new automated incubator on the diagnosis of bloodstream infections.
European Journal of Clinical Microbiology & Infectious Diseases: Official Publication of the European Society of Clinical Microbiology 2021, 40, 2639-2643.

Mascitti H, Jourdain P, Bleibtreu A, Jaulmes L, Dechartres A, Lescure X, Yordanov Y, Dinh A, AP-HP/Universities/INSERM COVID-19 research collaboration
Prognosis of rash and chilblain-like lesions among outpatients with COVID-19: a large cohort study.
European Journal of Clinical Microbiology & Infectious Diseases: Official Publication of the European Society of Clinical Microbiology 2021, 40, 2243-2248.

Kernéis S, Elie C, Fourgeaud J, Choupeaux L, Delarue SM, Alby ML, Quentin P, Pavie J, Brazille P, Néré ML, Minier M, Gabassi A, Gibaud A, Gauthier S, Leroy C, Voirin-Mathieu E, Poyart C, Vidaud M, Parfait B, Delaugerre C, Tréluyer JM, LeGoff J
Accuracy of saliva and nasopharyngeal sampling for detection of SARS-CoV-2 in community screening: a multicentric cohort study.
European Journal of Clinical Microbiology & Infectious Diseases: Official Publication of the European Society of Clinical Microbiology 2021, 40, 2379-2388.

Comets E, Rodrigues C, Jullien V, Ursino M
Conditional Non-parametric Bootstrap for Non-linear Mixed Effect Models.
Pharmaceutical Research 2021, 38, 1057-1066.

Boursier C, Duval X, Mahida B, Hoen B, Goehringer F, Selton-Suty C, Chevalier E, Roch V, Lamiral Z, Bourdon A, Piriou N, Pallardy A, Morel O, Rouzet F, Marie PY, AEPEI-TEPvENDO Study Group
Hypermetabolism of the spleen or bone marrow is an additional albeit indirect sign of infective endocarditis at FDG-PET.
Journal of Nuclear Cardiology: Official Publication of the American Society of Nuclear Cardiology 2021, 28, 2533-2542.

ISARIC Clinical Characterisation Group
COVID-19 symptoms at hospital admission vary with age and sex: results from the ISARIC prospective multinational observational study.
Infection 2021, 49, 889-905.

Benadji A, Duval X, Danis K, Hoen B, Page B, Béraud G, Vernet-Garnier V, Strady C, Brieu N, Maulin L, Roy C, Ploy MC, Gaillat J, Varon E, Tubiana S, COMBAT Study Group, SIIP Study Group
Relationship between serotypes, disease characteristics and 30-day mortality in adults with invasive pneumococcal disease.
Infection 2021

Maraolo AE, Corcione S, Grossi A, Signori A, Alicino C, Hussein K, Trecarichi EM, Viale P, Timsit JF, Veeraraghavan B, Villegas MV, Rahav G, Daikos GL, Vardakas KZ, Roilides E, Uhlemann AC, Ghafur AK, Mornese Pinna S, Bassetti M, Kohler PP, Giacobbe DR
The Impact of Carbapenem Resistance on Mortality in Patients With Klebsiella Pneumoniae Bloodstream Infection: An Individual Patient Data Meta-Analysis of 1952 Patients.
Infectious Diseases and Therapy 2021

Muff S, Tabah A, Que YA, Timsit JF, Mermel L, Harbarth S, Buetti N
Short-Course Versus Long-Course Systemic Antibiotic Treatment for Uncomplicated Intravascular Catheter-Related Bloodstream Infections due to Gram-Negative Bacteria, Enterococci or Coagulase-Negative Staphylococci: A Systematic Review.
Infectious Diseases and Therapy 2021, 10, 1591-1605.

Magréault S, Roy C, Launay M, Sermet-Gaudelus I, Jullien V
Pharmacokinetic and Pharmacodynamic Optimization of Antibiotic Therapy in Cystic Fibrosis Patients: Current Evidences, Gaps in Knowledge and Future Directions.
Clinical Pharmacokinetics 2021, 60, 409-445.

Vogelaers D, Blot S, Van den Berge A, Montravers P, Abdominal Sepsis Study (‘AbSeS’) Group on behalf of the Trials Group of the European Society of Intensive Care Medicine
Antimicrobial Lessons From a Large Observational Cohort on Intra-abdominal Infections in Intensive Care Units.
Drugs 2021

d'Humières C, Salmona M, Dellière S, Leo S, Rodriguez C, Angebault C, Alanio A, Fourati S, Lazarevic V, Woerther PL, Schrenzel J, Ruppé E
The Potential Role of Clinical Metagenomics in Infectious Diseases: Therapeutic Perspectives.
Drugs 2021, 81, 1453-1466.

Baud FJ, Jullien V, Secrétan PH, Houzé P, Lamhaut L
Are we correctly treating invasive candidiasis under continuous renal replacement therapy with echinocandins? Preliminary in vitro assessment.
Anaesthesia, Critical Care & Pain Medicine 2021, 40, 100640.

Peiffer-Smadja N, Rozencwajg S, Kherabi Y, Yazdanpanah Y, Montravers P
COVID-19 vaccines: a race against time.
Anaesthesia, Critical Care & Pain Medicine 2021, 100848.

Zahar JR, Allaouchiche B
Even vaccinated against COVID-19, we must continue to wear a mask.
Anaesthesia, Critical Care & Pain Medicine 2021, 40, 100849.

Terzi N, Dreyfuss D, Roux D
Disclosure of conflicts of interest should appear in clinical guidelines.
Anaesthesia, Critical Care & Pain Medicine 2021, 40, 100926.

Mercier JC, Ouldali N, Melki I, Basmaci R, Levy M, Titomanlio L, Beyler C, Meinzer U
Severe acute respiratory syndrome coronavirus 2-related multisystem inflammatory syndrome in children mimicking Kawasaki disease.
Archives of Cardiovascular Diseases 2021, 114, 426-433.

Amarsy R, Jacquier H, Munier AL, Merimèche M, Berçot B, Mégarbane B
Outbreak of NDM-1-producing Klebsiella pneumoniae in the intensive care unit during the COVID-19 pandemic: Another nightmare.
American Journal of Infection Control 2021, 49, 1324-1326.

Lamau MC, Ruiz E, Merrer J, Sibiude J, Huon C, Lepercq J, Goffinet F, Jarreau PH
A new individualized prognostic approach to the management of women at risk of extreme preterm birth in France: Effect on neonatal outcome.
Archives De Pediatrie: Organe Officiel De La Societe Francaise De Pediatrie 2021, 28, 366-373.

Bailey RL, Ramanan M, Litton E, Yan Kai NS, Coyer FM, Garrouste-Orgeas M, Tabah A, Welcome ICU contributors
Staff perceptions of family access and visitation policies in Australian and New Zealand intensive care units: The WELCOME-ICU survey.
Australian Critical Care: Official Journal of the Confederation of Australian Critical Care Nurses 2021, S1036-7314(21)00108-9.

Lemaitre F, Fily F, Foulquier JB, Revest M, Jullien V, Petitcollin A, Tattevin P, Tron C, Polard JL, Verdier MC, Comets E, Huten D, Arvieux C, Bellissant E, Laviolle B
Development of a dosing-adjustment tool for fluoroquinolones in osteoarticular infections: The Fluo-pop study.
Biomedicine & Pharmacotherapy = Biomedecine & Pharmacotherapie 2021, 142, 112053.

Gouel-Cheron A, Elmaleh Y, Couffignal C, Kantor E, Meslin S, Caillard A, Salome A, Hamada S, Cholley B, Mebazaa A, Longrois D, Bourgain JL, Billard V, Servin F, Montravers P
Effectiveness of anaesthesia ventilator use for mechanical ventilation in critically ill patients during the COVID-19 pandemic.
British Journal of Anaesthesia 2021, 127, e35-e37.

Delorme P, Lorthe E, Sibiude J, Kayem G
Preterm and term prelabour rupture of membranes: A review of timing and methods of labour induction.
Best Practice & Research. Clinical Obstetrics & Gynaecology 2021, 77, 27-41.

Boyer A, Timsit JF, Klouche K, Canet E, Phan TN, Bohé J, Rubin S, Orieux A, Lautrette A, Gruson D, Souweine B
Aminoglycosides in Critically Ill Septic Patients With Acute Kidney Injury Receiving Continuous Renal Replacement Therapy: A Multicenter, Observational Study.
Clinical Therapeutics 2021, S0149-2918(21)00206-X.

Boyer A, Timsit JF, Klouche K, Canet E, Phan TN, Bohé J, Rubin S, Orieux A, Lautrette A, Gruson D, Souweine B
Aminoglycosides in Critically Ill Septic Patients With Acute Kidney Injury Receiving Intermittent Hemodialysis: A Multicenter, Observational Study.
Clinical Therapeutics 2021, S0149-2918(21)00210-1.

Bouzid D, Zanella MC, Kerneis S, Visseaux B, May L, Schrenzel J, Cattoir V
Rapid diagnostic tests for infectious diseases in the emergency department.
Clinical Microbiology and Infection: The Official Publication of the European Society of Clinical Microbiology and Infectious Diseases 2021, 27, 182-191.

Loubet P, Mathieu P, Lenzi N, Galtier F, Lainé F, Lesieur Z, Vanhems P, Duval X, Postil D, Amour S, Rogez S, Lagathu G, L'Honneur AS, Foulongne V, Houhou N, Lina B, Carrat F, Launay O, Fluvac study group
Characteristics of human metapneumovirus infection in adults hospitalized for community-acquired influenza-like illness in France, 2012-2018: a retrospective observational study.
Clinical Microbiology and Infection: The Official Publication of the European Society of Clinical Microbiology and Infectious Diseases 2021, 27, 127.e1-127.e6.

Fiolet T, Guihur A, Rebeaud ME, Mulot M, Peiffer-Smadja N, Mahamat-Saleh Y
Effect of hydroxychloroquine with or without azithromycin on the mortality of coronavirus disease 2019 (COVID-19) patients: a systematic review and meta-analysis.
Clinical Microbiology and Infection: The Official Publication of the European Society of Clinical Microbiology and Infectious Diseases 2021, 27, 19-27.

Fiolet T, Guihur A, Rebeaud ME, Mulot M, Peiffer-Smadja N, Mahamat-Saleh Y
Effect of hydroxychloroquine with or without azithromycin on the mortality of COVID-19 patients: authors' response.
Clinical Microbiology and Infection: The Official Publication of the European Society of Clinical Microbiology and Infectious Diseases 2021, 27, 138-140.

Schön T, Werngren J, Machado D, Borroni E, Wijkander M, Lina G, Mouton J, Matuschek E, Kahlmeter G, Giske C, Santin M, Cirillo DM, Viveiros M, Cambau E
Multicentre testing of the EUCAST broth microdilution reference method for MIC determination on Mycobacterium tuberculosis.
Clinical Microbiology and Infection: The Official Publication of the European Society of Clinical Microbiology and Infectious Diseases 2021, 27, 288.e1-288.e4.

Meppiel E, Peiffer-Smadja N, Maury A, Bekri I, Delorme C, Desestret V, Gorza L, Hautecloque-Raysz G, Landre S, Lannuzel A, Moulin S, Perrin P, Petitgas P, SellaI F, Wang A, Tattevin P, de Broucker T, contributors to the NeuroCOVID registry
Neurologic manifestations associated with COVID-19: a multicentre registry.
Clinical Microbiology and Infection: The Official Publication of the European Society of Clinical Microbiology and Infectious Diseases 2021, 27, 458-466.

Gastli N, Loubinoux J, Daragon M, Lavigne JP, Saint-Sardos P, Pailhoriès H, Lemarié C, Benmansour H, d'Humières C, Broutin L, Dauwalder O, Levy M, Auger G, Kernéis S, Cattoir V, French FA-PP study group
Multicentric evaluation of BioFire FilmArray Pneumonia Panel for rapid bacteriological documentation of pneumonia.
Clinical Microbiology and Infection: The Official Publication of the European Society of Clinical Microbiology and Infectious Diseases 2021, 27, 1308-1314.

Tran VT, Mahévas M, Bani-Sadr F, Robineau O, Perpoint T, Perrodeau E, Gallay L, Ravaud P, Goehringer F, Lescure FX, COCORICO Collaborative Group
Corticosteroids in patients hospitalized for COVID-19 pneumonia who require oxygen: observational comparative study using routine care data.
Clinical Microbiology and Infection: The Official Publication of the European Society of Clinical Microbiology and Infectious Diseases 2021, 27, 603-610.

van Rooden SM, Aspevall O, Carrara E, Gubbels S, Johansson A, Lucet JC, Mookerjee S, Palacios-Baena ZR, Presterl E, Tacconelli E, Abbas M, Behnke M, Gastmeier P, van Mourik MSM, PRAISE network
Governance aspects of large-scale implementation of automated surveillance of healthcare-associated infections.
Clinical Microbiology and Infection: The Official Publication of the European Society of Clinical Microbiology and Infectious Diseases 2021, 27 Suppl 1, S20-S28.

van Mourik MSM, van Rooden SM, Abbas M, Aspevall O, Astagneau P, Bonten MJM, Carrara E, Gomila-Grange A, de Greeff SC, Gubbels S, Harrison W, Humphreys H, Johansson A, Koek MBG, Kristensen B, Lepape A, Lucet JC, Mookerjee S, Naucler P, Palacios-Baena ZR, Presterl E, Pujol M, Reilly J, Roberts C, Tacconelli E, Teixeira D, Tängdén T, Valik JK, Behnke M, Gastmeier P, PRAISE network
PRAISE: providing a roadmap for automated infection surveillance in Europe.
Clinical Microbiology and Infection: The Official Publication of the European Society of Clinical Microbiology and Infectious Diseases 2021, 27 Suppl 1, S3-S19.

Ghosn J, Piroth L, Epaulard O, Le Turnier P, Mentré F, Bachelet D, Laouénan C, French COVID cohort study and investigators groups
Persistent COVID-19 symptoms are highly prevalent 6 months after hospitalization: results from a large prospective cohort.
Clinical Microbiology and Infection: The Official Publication of the European Society of Clinical Microbiology and Infectious Diseases 2021, 27, 1041.e1-1041.e4.

Gallay L, Tran VT, Perrodeau E, Vignier N, Mahevas M, Bisio F, Forestier E, Lescure FX, COCO-OLD Study group
Fourteen-day survival among older adults with severe infection with severe acute respiratory syndrome coronavirus 2 treated with corticosteroid: a cohort study.
Clinical Microbiology and Infection: The Official Publication of the European Society of Clinical Microbiology and Infectious Diseases 2021, 27, 1145-1150.

Yordanov Y, Dinh A, Bleibtreu A, Mensch A, Lescure FX, Debuc E, Jourdain P, Jaulmes L, Dechartres A, AP-HP/Universities/Inserm COVID-19 research collaboration
Clinical characteristics and factors associated with hospital admission or death in 43 103 adult outpatients with coronavirus disease 2019 managed with the Covidom telesurveillance solution: a prospective cohort study.
Clinical Microbiology and Infection: The Official Publication of the European Society of Clinical Microbiology and Infectious Diseases 2021, 27, 1158-1166.

Ronat JB, Natale A, Kesteman T, Andremont A, Elamin W, Hardy L, Kanapathipillai R, Michel J, Langendorf C, Vandenberg O, Naas T, Kouassi F
AMR in low-resource settings: Médecins Sans Frontières bridges surveillance gaps by developing a turnkey solution, the Mini-Lab.
Clinical Microbiology and Infection: The Official Publication of the European Society of Clinical Microbiology and Infectious Diseases 2021, 27, 1414-1421.

Hobson CA, Cointe A, Jacquier H, Choudhury A, Magnan M, Courroux C, Tenaillon O, Bonacorsi S, Birgy A
Cross-resistance to cefiderocol and ceftazidime-avibactam in KPC β-lactamase mutants and the inoculum effect.
Clinical Microbiology and Infection: The Official Publication of the European Society of Clinical Microbiology and Infectious Diseases 2021, 27, 1172.e7-1172.e10.

Zeller V, Magreault S, Heym B, Salmon D, Kitzis MD, Billaud E, Marmor S, Jannot AS, Salomon L, Jullien V
Influence of the clindamycin administration route on the magnitude of clindamycin-rifampicin interaction: a prospective pharmacokinetic study.
Clinical Microbiology and Infection: The Official Publication of the European Society of Clinical Microbiology and Infectious Diseases 2021, 27, 1857.e1-1857.e7.

Dubois C, Smeesters PR, Refes Y, Levy C, Bidet P, Cohen R, Chalumeau M, Toubiana J, Cohen JF
Diagnostic accuracy of rapid nucleic acid tests for group A streptococcal pharyngitis: systematic review and meta-analysis.
Clinical Microbiology and Infection: The Official Publication of the European Society of Clinical Microbiology and Infectious Diseases 2021, 27, 1736-1745.

Buetti N, Marschall J, Timsit JF, Atkinson A, Kronenberg A, Sommerstein R, Swiss Centre for Antibiotic Resistance (ANRESIS)
Distribution of pathogens and antimicrobial resistance in bacteraemia according to hospitalization duration: a nationwide surveillance study in Switzerland.
Clinical Microbiology and Infection: The Official Publication of the European Society of Clinical Microbiology and Infectious Diseases 2021, S1198-743X(21)00212-3.

Ader F, Peiffer-Smadja N, Poissy J, Bouscambert-Duchamp M, Belhadi D, Diallo A, Delmas C, Saillard J, Dechanet A, Mercier N, Dupont A, Alfaiate T, Lescure FX, Raffi F, Goehringer F, Kimmoun A, Jaureguiberry S, Reignier J, Nseir S, Danion F, Clere-Jehl R, Bouiller K, Navellou JC, Tolsma V, Cabié A, Dubost C, Courjon J, Leroy S, Mootien J, Gaci R, Mourvillier B, Faure E, Pourcher V, Gallien S, Launay O, Lacombe K, Lanoix JP, Makinson A, Martin-Blondel G, Bouadma L, Botelho-Nevers E, Gagneux-Brunon A, Epaulard O, Piroth L, Wallet F, Richard JC, Reuter J, Staub T, Lina B, Noret M, Andrejak C, Lê MP, Peytavin G, Hites M, Costagliola D, Yazdanpanah Y, Burdet C, Mentré F, DisCoVeRy study group
An open-label randomized controlled trial of the effect of lopinavir/ritonavir, lopinavir/ritonavir plus IFN-β-1a and hydroxychloroquine in hospitalized patients with COVID-19.
Clinical Microbiology and Infection: The Official Publication of the European Society of Clinical Microbiology and Infectious Diseases 2021, 27, 1826-1837.

Husain M, Rachline A, Cousien A, Rolland S, Rouzaud C, Ferre VM, Gomez MV, Le Teurnier M, Wicky-Thisse M, Descamps D, Yazdanpanah Y, Charpentier C, Pasquet-Cadre A
Impact of the COVID-19 pandemic on the homeless: results from a retrospective closed cohort in France (March-May 2020).
Clinical Microbiology and Infection: The Official Publication of the European Society of Clinical Microbiology and Infectious Diseases 2021, 27, 1520.e1-1520.e5.

Chauffour A, Morel F, Reibel F, Petrella S, Mayer C, Cambau E, Aubry A
A systematic review of Mycobacterium leprae DNA gyrase mutations and their impact on fluoroquinolone resistance.
Clinical Microbiology and Infection: The Official Publication of the European Society of Clinical Microbiology and Infectious Diseases 2021, 27, 1601-1612.

Dinh A, Jaulmes L, Dechartres A, Duran C, Mascitti H, Lescure X, Yordanov Y, Jourdain P, AP-HP/Universities/INSERM COVID-19 research collaboration, Data-sciences committee, Scientific committee, Covidom regional centre steering commitee
Time to resolution of respiratory and systemic coronavirus disease 2019 symptoms in community setting.
Clinical Microbiology and Infection: The Official Publication of the European Society of Clinical Microbiology and Infectious Diseases 2021, 27, 1862.e1-1862.e4.

Pereyre S, Caméléna F, Hénin N, Berçot B, Bébéar C
Clinical performance of four multiplex real-time PCR kits detecting urogenital and sexually transmitted pathogens.
Clinical Microbiology and Infection: The Official Publication of the European Society of Clinical Microbiology and Infectious Diseases 2021, S1198-743X(21)00557-7.

Seurat J, Tang Y, Mentré F, Nguyen TT
Finding optimal design in nonlinear mixed effect models using multiplicative algorithms.
Computer Methods and Programs in Biomedicine 2021, 207, 106126.

Caméléna F, Moy AC, Dudoignon E, Poncin T, Deniau B, Guillemet L, Le Goff J, Budoo M, Benyamina M, Chaussard M, Coutrot M, Lafaurie M, Plaud B, Mebazaa A, Depret F, Berçot B
Performance of a multiplex polymerase chain reaction panel for identifying bacterial pathogens causing pneumonia in critically ill patients with COVID-19.
Diagnostic Microbiology and Infectious Disease 2021, 99, 115183.

Farfour E, Lomont A, Fihman V, Lecuru M, Hüssler S, Ouzani S, Zahar JR, Dortet L, GMC study group
Rapid and accurate eXDR screening: use Xpert Carba-R® with FecalSwab®.
Diagnostic Microbiology and Infectious Disease 2021, 99, 115279.

Farfour E, Si Larbi AG, Cattoir V, Corvec S, Guillard T, Grillon A, Isnard C, Mérens A, Degand N, Billard-Pomares T, Fournier D, Bille E, Le Brun C, Plouzeau C, Flevin E, Yin N, Woerther PL, Lourtet J, Lesprit P, Le Monnier A, GMC study group
Temocillin susceptibility among Enterobacterales strains recovered from blood culture in France.
Diagnostic Microbiology and Infectious Disease 2021, 100, 115368.

Charpentier C, Pellissier G, Ichou H, Ferré VM, Larfi I, Phung BC, Vallois D, LeGac S, Aubier M, Descamps D, Fidouh-Houhou N, Bouvet E
Contribution of rapid lateral flow assays from capillary blood specimens to the diagnosis of COVID-19 in symptomatic healthcare workers: a pilot study in a university hospital, Paris, France.
Diagnostic Microbiology and Infectious Disease 2021, 101, 115430.

Andremont A, Cervesi J, Bandinelli PA, Vitry F, de Gunzburg J
Spare and repair the gut microbiota from antibiotic-induced dysbiosis: state-of-the-art.
Drug Discovery Today 2021, 26, 2159-2163.

Eloy P, Le Grand R, Malvy D, Guedj J
Combined treatment of molnupiravir and favipiravir against SARS-CoV-2 infection: One + zero equals two?.
EBioMedicine 2021, 74, 103663.

Louchet M, Peytavin G, Didelot H, Lê M, Bourgeois-Moine A, Carbillon L, Luton D, Matheron I, Rigonnot L, Mandelbrot L
Frequency of differential placental transfer to twins of maternal antiretroviral medications.
European Journal of Obstetrics, Gynecology, and Reproductive Biology 2021, 256, 405-411.

Hcini N, Maamri F, Picone O, Carod JF, Lambert V, Mathieu M, Carles G, Pomar L
Maternal, fetal and neonatal outcomes of large series of SARS-CoV-2 positive pregnancies in peripartum period: A single-center prospective comparative study.
European Journal of Obstetrics, Gynecology, and Reproductive Biology 2021, 257, 11-18.

Pencole L, Peyronnet V, Mandelbrot L, Lepercq J
Risk factors of relaparotomy for intra-abdominal hemorrhage after cesarean delivery.
European Journal of Obstetrics, Gynecology, and Reproductive Biology 2021, 260, 118-123.

Ben M'Barek I, Landraud L, Desfrere L, Sallah K, Couffignal C, Schneider M, Mandelbrot L
Contribution of vaginal culture to predict early onset neonatal infection in preterm prelabor rupture of membranes.
European Journal of Obstetrics, Gynecology, and Reproductive Biology 2021, 261, 78-84.

Boukobza M, Ilic-Habensus E, Duval X, Laissy JP
Usefulness of contrast-enhanced 3D MR angiography and contrast-enhanced 3D T1 sequence for detecting intracranial infectious aneurysms in infectious endocarditis.
European Journal of Radiology 2021, 144, 110008.

Belloir A, Blanquart F
Estimating the global reduction in transmission and rise in detection capacity of the novel coronavirus SARS-CoV-2 in early 2020.
Epidemics 2021, 35, 100445.

Mattern J, Sibiude J, Picone O, Mandelbrot L
[Efficiency of Bakri intra uterine tamponade balloon use in postpartum hemorrhage: Before and after study].
Gynecologie, Obstetrique, Fertilite & Senologie 2021, 49, 239-245.

Mandelbrot L, Kieffer F, Wallon M, Winer N, Massardier J, Picone O, Fuchs F, Benoist G, Garcia-Meric P, L'Ollivier C, Paris L, Piarroux R, Villena I, Peyron F
[Toxoplasmosis in pregnancy: Practical Management].
Gynecologie, Obstetrique, Fertilite & Senologie 2021, 49, 782-791.

Dauriat G, Reynaud-Gaubert M, Cottin V, Lamia B, Montani D, Canuet M, Boissin C, Tromeur C, Chaouat A, Degano B, Bergot E, Sanchez O, Prevot G, Sitbon O, Thabut G, Belhadi D, de Beauregard YC, Bencherif A, Humbert M, Simonneau G, Laouenan C, Mal H
Severe pulmonary hypertension associated with chronic obstructive pulmonary disease: A prospective French multicenter cohort.
The Journal of Heart and Lung Transplantation: The Official Publication of the International Society for Heart Transplantation 2021, 40, 1009-1018.

Deconinck L, Gschwind R, Petitjean M, Gueye S, Leflon-Guibout V, Maataoui N, Rondinaud E, Suard A, Gallais K, Richaud R, Fuchs A, Iung B, Alkhoder S, Ismaël S, Herrou J, Prié H, Armand-Lefèvre L, d'Humières C, Ruppé E
Endocarditis caused by Thalassospira sp.
IDCases 2021, 24, e01109.

Maillet F, Pourbaix A, le Pluart D, Sirmai L, Postolache SA, Couvelard A, Houhou-Fidouh N, Males L, Deconinck L, Lescure FX
Cytomegalovirus proctitis as a complication of COVID-19 with immunosuppressive treatments.
IDCases 2021, 24, e01111.

Gourjault C, Tarhini H, Rahi M, Thy M, Le Pluart D, Rioux C, Parisey M, Ismael S, Al Rida Aidibi A, Paradis V, Ghosn J, Yazdanpanah Y, Lescure FX, Gervais A
Cholangitis in three critically ill patients after a severe CoVID-19 infection.
IDCases 2021, e01267.

Vanjak A, Canouï E, Honsel V, Argy N, Houzé S, Roux O, Fantin B
Early primary toxoplasmosis transmitted by liver graft: A case report.
Infectious Diseases Now 2021, 51, 315-316.

Bouiller K, Catho G, Le Maréchal M, Gras J, Hentzien M, Peiffer-Smadja N, Bessis S, Cabon M, Dubee V, Lemaignen A, Thy M, Martins C, Thill P, Osei L, ReJIF (Réseau des Jeunes Infectiologues Français, Société de Pathologie Infectieuse de Langue Française)
The role of infectious disease trainees during the first wave of the COVID-19 pandemic: A national survey.
Infectious Diseases Now 2021, 51, 215-217.

Lacarra B, Mellon G, Ortega Perez I, D'Ortenzio E, Lescure FX
Bridging the gap between scientific discovery and clinical application during the COVID-19 epoch.
Infectious Diseases Now 2021, 51, 581-582.

Castan B, Akrich B, Levy-Bachelot L, Amode A, Berthelot A, Mackosso C, Mathis L, Mootien J, Ruimy R, Ruiz F, Timsit JF, Boutoille D
Real-world evaluation of ceftolozane/tazobactam therapy and clinical outcomes in France.
Infectious Diseases Now 2021, S2666-9919(21)00111-1.

Cohen R, Ashman M, Taha MK, Varon E, Angoulvant F, Levy C, Rybak A, Ouldali N, Guiso N, Grimprel E
Pediatric Infectious Disease Group (GPIP) position paper on the immune debt of the COVID-19 pandemic in childhood, how can we fill the immunity gap?.
Infectious Diseases Now 2021, 51, 418-423.

Pilmis B, de Ponfilly GP, Farfour E, Ranc AG, Fihman V, Bille E, Dortet L, Degand N, Morand P, Potron A, Mizrahi A, Laurent F, Le Brun C, Guillard T, Héry-Arnaud G, Piau C, Barraud O, Ruffier d'Epenoux L, Zahar JR, Le Monnier A, GMC study group
Epidemiology and clinical characteristics of Klebsiella spp. meningitis in France.
Infectious Diseases Now 2021, S2666-9919(21)00115-9.

Huriez P, Lourtet-Hascoet J, Zahar JR, Le Monnier A, Pilmis B
Frequency of surface bacterial contamination in family physicians' offices.
Infectious Diseases Now 2021, S2666-9919(21)00117-2.

Dupré A, Argy N, Houze S, Leleu A, Choquet C, Matheron S, Bleibtreu A
Imported malaria in metropolitan France, from recommendations to clinical practice - proposal for improvement.
Infectious Diseases Now 2021, 51, 667-672.

Telford E, Ortega-Perez I, Mellon G, Lacarra B, Adjadj E, Madelaine C, D'Ortenzio E, Yazdanpanah Y
Chronicles of a pandemic: how France coordinated the scientific research response to COVID-19.
Infectious Diseases Now 2021, S2666-9919(21)00487-5.

Tielli A, Jullien V, Pull L, Bouchaud O, Siriez JY
Unintentional artenimol/piperaquine overdose in two children occurring without evidence of subsequent cardiotoxicity.
International Journal of Antimicrobial Agents 2021, 57, 106347.

Martínez-Sellés M, Tattevin P, Valerio-Minero M, de Alarcón A, Fariñas MC, Mirabet-Pérez S, Lavie-Badie Y, Ambrosi P, Chabanne C, Duval X, Lecomte R, López-Vilella R, Uribarri A, Vinuesa D, Muñoz P
Infective endocarditis in patients with heart transplantation.
International Journal of Cardiology 2021, 328, 158-162.

Woerther PL, d'Humières C, Lescure X, Dubreuil L, Rodriguez C, Barbier F, Fihman V, Ruppé E
Is the term "anti-anaerobic" still relevant?.
International journal of infectious diseases: IJID: official publication of the International Society for Infectious Diseases 2021, 102, 178-180.

Delory T, Goujon A, Masson-Lecomte A, Arias P, Laurancon-Fretar A, Bercot B, Mongiat-Artus P, Molina JM, Lafaurie M
Fosfomycin-trometamol (FT) or fluoroquinolone (FQ) as single-dose prophylaxis for transrectal ultrasound-guided prostate biopsy (TRUS-PB): A prospective cohort study.
International journal of infectious diseases: IJID: official publication of the International Society for Infectious Diseases 2021, 102, 269-274.

Pilmis B, Jiang O, Mizrahi A, Nguyen Van JC, Lourtet-Hascoët J, Voisin O, Le Lorc'h E, Hubert S, Ménage E, Azria P, Borie MF, Mahé A, Mourad JJ, Trabattoni E, Ganansia O, Zahar JR, Le Monnier A
No significant difference between ceftriaxone and cefotaxime in the emergence of antibiotic resistance in the gut microbiota of hospitalized patients: A pilot study.
International journal of infectious diseases: IJID: official publication of the International Society for Infectious Diseases 2021, 104, 617-623.

Bachir M, Guglielmetti L, Tunesi S, Billard-Pomares T, Chiesi S, Jaffré J, Langris H, Pourcher V, Schramm F, Lemaître N, Robert J, Isoniazid Resistance Group
Isoniazid-monoresistant tuberculosis in France: Risk factors, treatment outcomes and adverse events.
International journal of infectious diseases: IJID: official publication of the International Society for Infectious Diseases 2021, 107, 86-91.

Meybeck A, Tetart M, Baclet V, Alcaraz I, Blondiaux N, Peytavin G, Veyziris N, Robineau O, Senneville E
A disseminated Mycobacterium marinum infection in a renal transplant HIV-infected patient successfully treated with a bedaquiline-containing antimycobacterial treatment: a case report.
International journal of infectious diseases: IJID: official publication of the International Society for Infectious Diseases 2021

Lebourgeois S, Storto A, Gout B, Le Hingrat Q, Ardila Tjader G, Cerdan MDC, English A, Pareja J, Love J, Houhou-Fidouh N, Manissero D, Descamps D, Visseaux B
Performance evaluation of the QIAstat-Dx® Respiratory SARS-CoV-2 Panel.
International journal of infectious diseases: IJID: official publication of the International Society for Infectious Diseases 2021, 107, 179-181.

Ortuño-Gutiérrez N, Mzembaba A, Ramboarina S, Andriamira R, Baco A, Braet S, Younoussa A, Cauchoix B, Salim Z, Amidy M, Grillone S, Rasamoelina T, Cambau E, Geluk A, de Jong BC, Richardus JH, Hasker E
Exploring clustering of leprosy in the Comoros and Madagascar: a geospatial analysis.
International journal of infectious diseases: IJID: official publication of the International Society for Infectious Diseases 2021

Caméléna F, Poncin T, Dudoignon E, Salmona M, Le Goff J, Donay JL, Lafaurie M, Darmon M, Azoulay E, Plaud B, Mebazaa A, Dépret F, Jacquier H, Berçot B
Rapid identification of bacteria from respiratory samples of patients hospitalized in intensive care units, with FilmArray Pneumonia Panel Plus.
International journal of infectious diseases: IJID: official publication of the International Society for Infectious Diseases 2021, 108, 568-573.

Jary A, Teguete I, Sidibé Y, Kodio A, Dolo O, Burrel S, Boutolleau D, Beauvais-Remigereau L, Sayon S, Kampo M, Traoré FT, Sylla M, Achenbach C, Murphy R, Berçot B, Bébéar C, Calvez V, Marcelin AG, Maiga AI
Prevalence of cervical HPV infection, sexually transmitted infections and associated antimicrobial resistance in women attending cervical cancer screening in Mali.
International journal of infectious diseases: IJID: official publication of the International Society for Infectious Diseases 2021, 108, 610-616.

Nyirenda T, Bockarie M, Machingaidze S, Nderu M, Singh M, Fakier N, Habarugira JM, Beattie P, Pandya L, Jajkowicz D, Yazdanpanah Y, Hankins C, Makanga M
Strengthening capacity for clinical research in sub-Saharan Africa: partnerships and networks.
International journal of infectious diseases: IJID: official publication of the International Society for Infectious Diseases 2021, 110, 54-61.

Eloy P, Tardivon C, Martin-Blondel G, Isnard M, Turnier PL, Marechal ML, Cabié A, Launay O, Tattevin P, Senneville E, Ansart S, Goehringer F, Chirouze C, Bousson L, Laouénan C, Etienne M, Nguyen D, Ghosn J, Duval X, French COVID cohort study and investigators groups
Severity of self-reported symptoms and psychological burden 6-months after hospital admission for COVID-19: a prospective cohort study.
International journal of infectious diseases: IJID: official publication of the International Society for Infectious Diseases 2021, 112, 247-253.

Lévy Y, Wiedemann A, Hejblum BP, Durand M, Lefebvre C, Surénaud M, Lacabaratz C, Perreau M, Foucat E, Déchenaud M, Tisserand P, Blengio F, Hivert B, Gauthier M, Cervantes-Gonzalez M, Bachelet D, Laouénan C, Bouadma L, Timsit JF, Yazdanpanah Y, Pantaleo G, Hocini H, Thiébaut R, French COVID cohort study group
CD177, a specific marker of neutrophil activation, is associated with coronavirus disease 2019 severity and death.
iScience 2021, 24, 102711.

Duboc H, Issoufaly T, Soliman H, Sztrymf B, Prat D, Le Meur M, Laissi M, Berquier G, Dreyfuss D, Coffin B, Ricard JD, Messika J
Are bedside colonoscopies performed in intensive care unit really useful?.
Journal of Critical Care 2021, 63, 56-61.

Martin A, Storto A, Le Hingrat Q, Collin G, André B, Mallory A, Dangla R, Descamps D, Visseaux B, Gossner O
High-sensitivity SARS-CoV-2 group testing by digital PCR among symptomatic patients in hospital settings.
Journal of Clinical Virology: The Official Publication of the Pan American Society for Clinical Virology 2021, 141, 104895.

Crescenzo-Chaigne B, Behillil S, Enouf V, Escriou N, Petres S, Ungeheuer MN, Ghosn J, Tubiana S, Bouadma L, van der Werf S, Demeret C, French COVID cohort study group
Nasopharyngeal and serological anti SARS-CoV-2 IgG/IgA responses in COVID-19 patients.
Journal of Clinical Virology Plus 2021, 1, 100041.

Sadek M, Ruppé E, Habib A, Zahra R, Poirel L, Nordmann P
International circulation of aztreonam/avibactam-resistant NDM-5-producing Escherichia coli isolates: successful epidemic clones.
Journal of Global Antimicrobial Resistance 2021, 27, 326-328.

Keta-Cov research group. Electronic address: vincent.mallet@aphp.fr, Keta-Cov research group
Intravenous ketamine and progressive cholangiopathy in COVID-19 patients.
Journal of Hepatology 2021, 74, 1243-1244.

Mallet V, Keta-Cov research group
Reply to: "Progressive cholangiopathy in COVID-19 patients: Other possible diagnoses than ketamine-induced cholangiopathy should be considered".
Journal of Hepatology 2021, 75, 990-992.

Saliba R, Ghelfenstein-Ferreira T, Lomont A, Pilmis B, Carbonnelle E, Seytre D, Nasser-Ayoub E, Zahar JR, Karam-Sarkis D
Risk factors for the environmental spread of different multidrug-resistant organisms: a prospective cohort study.
The Journal of Hospital Infection 2021, 111, 155-161.

Pilmis B, Mizrahi A, Péan de Ponfilly G, Philippart F, Bruel C, Zahar JR, Le Monnier A
Relative faecal abundance of extended-spectrum β-lactamase-producing Enterobacterales and its impact on infections among intensive care unit patients: a pilot study.
The Journal of Hospital Infection 2021, 112, 92-95.

de Lafforest S, Magnier A, Vallée M, Bey E, Le Goux C, Saint F, Therby A, Zahar JR, Sotto A, Bruyere F, Grammatico-Guillon L
FUrTIHF: French Urinary Tract Infections in Healthcare Facilities French Urinary Tract Infections in Healthcare Facilities: 5-year historic cohort 2014-2018.
The Journal of Hospital Infection 2021, S0195-6701(21)00225-5.

Lepape A, Machut A, Gerbier-Colomban S, Kuczewski E, Rasigade JP, Timsit JF, Vanhems P, Wallet F, Savey A, Friggeri A, REA-REZO Group
Automated surveillance in French ICUs: is it feasible? Results from a survey in French ICUs participating in a surveillance network.
The Journal of Hospital Infection 2021, 115, 1-4.

Klement-Frutos E, Burrel S, Peytavin G, Marot S, Lê MP, Godefroy N, Calvez V, Marcelin AG, Caumes E, Pourcher V, Boutolleau D
Early administration of ritonavir-boosted lopinavir could prevent severe COVID-19.
The Journal of Infection 2021, 82, 159-198.

Grall I, Alloui CA, Tandjaoui-Lambiotte Y, Deslandes A, Seytre D, Chappe J, Carbonnelle E, Brichler S, Jacolot A, Zahar JR, Lomont A
Viral transmission in asymptomatic cases of SARS-CoV-2 infection.
The Journal of Infection 2021, 82, 282-327.

Tubiana S, Burdet C, Houhou N, Thy M, Manchon P, Blanquart F, Charpentier C, Guedj J, Alavoine L, Behillil S, Leclercq A, Lucet JC, Yazdanpanah Y, Attia M, Demeret C, Rose T, Bielicki JA, Bruijning-Verhagen P, Goossens H, Descamps D, van der Werf S, Lina B, Duval X, CoVCONTACT study group, Principal investigator, Sponsor: Inserm
High-risk exposure without personal protective equipment and infection with SARS-CoV-2 in-hospital workers - The CoV-CONTACT cohort.
The Journal of Infection 2021, 82, 186-230.

de Montmollin E, Faille D, Andrieu V, Ajzenberg N, Timsit JF
Intensified thromboprophylaxis in COVID-19 critically ill patients: Is it enough?.
The Journal of Infection 2021

Velly L, Volant S, Fitting C, Ghazali DA, Salipante F, Mayaux J, Monsel G, Cavaillon JM, Hausfater P
Optimal combination of early biomarkers for infection and sepsis diagnosis in the emergency department: The BIPS study.
The Journal of Infection 2021, 82, 11-21.

Teyssou E, Soulie C, Visseaux B, Lambert-Niclot S, Ferre V, Marot S, Jary A, Sayon S, Zafilaza K, Leducq V, Schnuriger A, Abdi B, Wirden M, Houhou-Fidouh N, Charpentier C, Morand-Joubert L, Burrel S, Descamps D, Calvez V, Marcelin AG
The 501Y.V2 SARS-CoV-2 variant has an intermediate viral load between the 501Y.V1 and the historical variants in nasopharyngeal samples from newly diagnosed COVID-19 patients.
The Journal of Infection 2021, 83, 119-145.

Teyssou E, Delagrèverie H, Visseaux B, Lambert-Niclot S, Brichler S, Ferre V, Marot S, Jary A, Todesco E, Schnuriger A, Ghidaoui E, Abdi B, Akhavan S, Houhou-Fidouh N, Charpentier C, Morand-Joubert L, Boutolleau D, Descamps D, Calvez V, Marcelin A, Soulie C
The Delta SARS-CoV-2 variant has a higher viral load than the Beta and the historical variants in nasopharyngeal samples from newly diagnosed COVID-19.
The Journal of Infection 2021, S0163-4453(21)00416-3.

Péan de Ponfilly G, Chauvin A, Salmona M, Benmansour H, Bercot B, Camelena F, Courbin V, Eyer X, Lecorche E, Mougari F, Munier AL, Revue E, LeGoff J, Cambau E, Jacquier H
Impact of a 24/7 multiplex-PCR on the management of patients with confirmed viral meningitis.
The Journal of Infection 2021, 83, 650-655.

Tsatsaris V, Mariaggi AA, Launay O, Couffignal C, Rousseau J, Ancel PY, Marcault E, Ville Y, Cordier AG, Vivanti A, Carrara J, Luton D, Dommergues M, Borie C, Kayem G, Alessandrini V, Lecomte L, Meritet JF, Leruez-Ville M, Goffinet F, Dubois C, Picone O, Vauloup Fellous C
SARS-COV-2 IgG antibody response in pregnant women at delivery.
Journal of Gynecology Obstetrics and Human Reproduction 2021, 50, 102041.

Céruti H, Kayem G, Guilbaud L, Dussaux C, Gervais A, Beaufrère A, Coffin B, Mandelbrot L, Maisonneuve E
Intrahepatic cholestasis of pregnancy associated with azathioprine: A case series.
Journal of Gynecology Obstetrics and Human Reproduction 2021, 50, 102083.

Bloomfield J, Pénager C, Mandelbrot L
Shirodkar cerclage: Obstetrical and neonatal outcomes in a single-center cohort of 55 cases.
Journal of Gynecology Obstetrics and Human Reproduction 2021, 50, 102152.

Blanc-Petitjean P, Saumier S, Meunier G, Sibiude J, Mandelbrot L
Prolongation of active second stage of labor: Associated factors and perinatal outcomes.
Journal of Gynecology Obstetrics and Human Reproduction 2021, 50, 102205.

Bensoussan E, Ouldali N, Ashkenazi S, Angoulvant F, Cohen R, Levy C
Impact of Coronavirus Disease 2019 (COVID-19) Pandemic on Pediatric Infectious Disease Research.
The Journal of Pediatrics 2021, 230, 279-281.e2.

Tebeka S, Le Strat Y, De Premorel Higgons A, Benachi A, Dommergues M, Kayem G, Lepercq J, Luton D, Mandelbrot L, Ville Y, Ramoz N, Tezenas du Montcel S, IGEDEPP Groups, Mullaert J, Dubertret C
Prevalence and incidence of postpartum depression and environmental factors: The IGEDEPP cohort.
Journal of Psychiatric Research 2021, 138, 366-374.

Visseaux B, Collin G, Houhou-Fidouh N, Le Hingrat Q, Ferré VM, Damond F, Ichou H, Descamps D, Charpentier C
Evaluation of three extraction-free SARS-CoV-2 RT-PCR assays: A feasible alternative approach with low technical requirements.
Journal of Virological Methods 2021, 291, 114086.

Lefrancq N, Paireau J, Hozé N, Courtejoie N, Yazdanpanah Y, Bouadma L, Boëlle PY, Chereau F, Salje H, Cauchemez S
Evolution of outcomes for patients hospitalised during the first 9 months of the SARS-CoV-2 pandemic in France: A retrospective national surveillance data analysis.
The Lancet Regional Health. Europe 2021, 5, 100087.

Fournier M, Faille D, Dossier A, Mageau A, Nicaise Roland P, Ajzenberg N, Borie R, Bouadma L, Bunel V, Castier Y, Choquet C, Crestani B, Daugas E, Deconinck L, Descamps D, Descamps V, Dieudé P, Ducrocq G, Faucher N, Goulenok T, Guidoux C, Khalil A, Lavallée P, Lescure FX, Lortat-Jacob B, Mal H, Mutuon P, Pellenc Q, Steg PG, Taille C, Timsit JF, Yazdanpanah Y, Papo T, Sacré K
Arterial Thrombotic Events in Adult Inpatients With COVID-19.
Mayo Clinic Proceedings 2021, 96, 295-303.

Lefèvre B, Blanchon T, Saint-Martin P, Tattevin P, Che D, Caumes E, Pitel T, Rossignol L, Dournon N, Duval X, Hoen B, SPILF-COREB Emergence group
Evaluation of a web-based self-reporting method for monitoring international passengers returning from an area of emerging infection.
Infectious Diseases Now 2021, 51, 140-145.

Ben Hayoun M, Tubiana S, Varon E, Naccache JM, Le Floch H, Leport C, Claessens YE, Duval X, PASCAN ESCAPED study group
2010 French SPILF-AFSSAPS guiding criteria for Streptococcuspneumoniae acute community-acquired pneumonia: Evaluation in patients of the PACSCAN-ESCAPED cohort.
Infectious Diseases Now 2021, 52, 146-152.

Tarhini H, Husain M, Poey N, Lariven S, Lescure FX, Yazdanpanah Y, Gervais A
Jaundice in a patient treated with Anakinra in a context of Covid-19.
Infectious Diseases Now 2021, 51, 217-218.

Sallard E, Belhadi D, Lescure FX, Yazdanpanah Y, Peiffer-Smadja N
Clinical trial protocols of repurposed prophylaxis for COVID-19: A review.
Infectious Diseases Now 2021, 51, 7-13.

Gressens SB, Billard-Pomares T, Leboité H, Cruaud P, Bouchaud O, Carbonnelle E, Méchaï F
Pulmonary tuberculosis: Evaluation of current diagnostic strategy.
Infectious Diseases Now 2021, 51, 273-278.

Bendjelloul G, Gerard S, Birgand G, Lenne F, Rioux C, Lescure X, Yazdanpanah Y, Lucet JC
Impact of admission to high-risk isolation room on patients' and healthcare workers' perceptions: A qualitative cross-assessment Approach.
Infectious Diseases Now 2021, 51, 247-252.

Akhoundi M, Marteau A, Mechaï F, Mantelet S, Izri A
Molecular characterization and genetic diversity of Loa loa parasites responsible of a long-delayed filarial infection in an immigrant patient inhabited in Paris.
Microbial Pathogenesis 2021, 158, 105101.

Maury A, Lyoubi A, Peiffer-Smadja N, de Broucker T, Meppiel E
Neurological manifestations associated with SARS-CoV-2 and other coronaviruses: A narrative review for clinicians.
Revue Neurologique 2021, 177, 51-64.

Hansel B, Potier L, Chalopin S, Larger E, Gautier JF, Delestre F, Masdoua V, Visseaux B, Lucet JC, Kerneis S, Abouleka Y, Thebaut JF, Riveline JP, Kadouch D, Roussel R
The COVID-19 lockdown as an opportunity to change lifestyle and body weight in people with overweight/obesity and diabetes: Results from the national French COVIDIAB cohort.
Nutrition, metabolism, and cardiovascular diseases: NMCD 2021, 31, 2605-2611.

Ferraretto X, Hammas K, Llabador MA, Gricourt S, Labrosse J, Lousqui J, Epelboin S, Tubiana S, Patrat C
Early embryo development anomalies identified by time-lapse system: prevalence and impacting factors.
Reproductive Biomedicine Online 2021, 43, 627-636.

Delforge J, Sovaila S, Alix L, Didon A, Steichen O, Ranque B, Froissart A, Amadou K, Hanslik T, Cador B, Bergmann JF, Mekininan A, Goujard C, Gayet S, Cathebras P, Fantin B, Raigniac D, Weber JC, Rosenthal E, Hery L, Andres E, Benhamou Y, Bourgarit A, pour le groupe SiFMI 2015
[Characteristics of patients admitted from emergency units in 18 internal medicine departments and organisation of these departments: A cross sectional study from SNFMI (SiFMI study group) in 2015].
La Revue De Medecine Interne 2021, 42, 79-85.

Cohen Aubart F, Papo T, Hertig A, Renaud MC, Steichen O, Amoura Z, Braun M, Palombi O, Duguet A, Roux D
Are script concordance tests suitable for the assessment of undergraduate students? A multicenter comparative study.
La Revue De Medecine Interne 2021, 42, 243-250.

Cohen Aubart F, Lhote R, Hertig A, Noel N, Costedoat-Chalumeau N, Cariou A, Meyer G, Cymbalista F, de Prost N, Pottier P, Joly L, Lambotte O, Renaud MC, Badoual C, Braun M, Palombi O, Duguet A, Roux D
Progressive clinical case-based multiple-choice questions: An innovative way to evaluate and rank undergraduate medical students.
La Revue De Medecine Interne 2021, 42, 302-309.

Cohen Aubart F, Roux D
[Reform of the second cycle of medical studies in France: Risk or opportunity?].
La Revue De Medecine Interne 2021, 42, 149-153.

Jouneau S, Vuillard C, Salé A, Bazin Y, Sohier L, Kerjouan M, Ricard JD, Messika J
Outpatient management of primary spontaneous pneumothorax.
Respiratory Medicine 2021, 176, 106240.

Frija-Masson J, Debray MP, Boussouar S, Khalil A, Bancal C, Motiejunaite J, Galarza-Jimenez MA, Benzaquen H, Penaud D, Laveneziana P, Malrin R, Redheuil A, Donciu V, Lucidarme O, Taillé C, Guerder A, Arnoult F, Vidal-Petiot E, Flamant M, Similowski T, Morelot-Panzini C, Faure M, Lescure FX, Straus C, d'Ortho MP, Gonzalez-Bermejo J
Residual ground glass opacities three months after Covid-19 pneumonia correlate to alteration of respiratory function: The post Covid M3 study.
Respiratory Medicine 2021, 184, 106435.

Douangmala J, Bourdon O, Gaschignard J, Durey V, Prot-Labarthe S
[Medication and children: Practical situations to address the risks]..
Soins. Pediatrie, puericulture 2021, 42, 41-47.

Dupont A, Chevret S, Montlahuc C, Resche-Rigon M, Fontaine Y, Allaoua S, Kiladjian JJ, Ghrieb Z
[Satisfaction survey in the clinical investigations center (CIC-1427) in Saint-Louis hospital Paris, France].
Therapie 2021, 76, 54-57.

Leblanc C, Brun S, Bouchaud O, Izri A, Ok V, Caseris M, Sorge F, Pham LL, Paugam A, Paris L, Jaureguiberry S, Bloch-Queyrat C, Boubaya M, Faye A, Mariani P, de Pontual L
Imported schistosomiasis in Paris region of France: A multicenter study of prevalence and diagnostic methods..
Travel medicine and infectious disease 2021, 41, 102041.

Mourand G, Paboeuf F, Grippon P, Lucas P, Bougeard S, Denamur E, Kempf I
Impact of Escherichia coli probiotic strains ED1a and Nissle 1917 on the excretion and gut carriage of extended-spectrum beta-lactamase-producing E. coli in pigs..
Veterinary and animal science 2021, 14, 100217.

Boukobza M, Duval X, Laissy JP
Utility of Susceptibility-Weighted Angiography Sequence in the Diagnosis of Ruptured Infectious Aneurysms.
World Neurosurgery 2021, 149, 171-173.

Dinh A, Ropers J, Duran C, Davido B, Deconinck L, Matt M, Senard O, Lagrange A, Makhloufi S, Mellon G, de Lastours V, Bouchand F, Mathieu E, Kahn JE, Rouveix E, Grenet J, Dumoulin J, Chinet T, Pépin M, Delcey V, Diamantis S, Benhamou D, Vitrat V, Dombret MC, Renaud B, Perronne C, Claessens YE, Labarère J, Bedos JP, Aegerter P, Crémieux AC, Pneumonia Short Treatment (PTC) Study Group
Discontinuing β-lactam treatment after 3 days for patients with community-acquired pneumonia in non-critical care wards (PTC): a double-blind, randomised, placebo-controlled, non-inferiority trial.
Lancet (London, England) 2021, 397, 1195-1203.

Gaudry S, Hajage D, Martin-Lefevre L, Lebbah S, Louis G, Moschietto S, Titeca-Beauport D, Combe BL, Pons B, de Prost N, Besset S, Combes A, Robine A, Beuzelin M, Badie J, Chevrel G, Bohé J, Coupez E, Chudeau N, Barbar S, Vinsonneau C, Forel JM, Thevenin D, Boulet E, Lakhal K, Aissaoui N, Grange S, Leone M, Lacave G, Nseir S, Poirson F, Mayaux J, Asehnoune K, Geri G, Klouche K, Thiery G, Argaud L, Rozec B, Cadoz C, Andreu P, Reignier J, Ricard JD, Quenot JP, Dreyfuss D
Comparison of two delayed strategies for renal replacement therapy initiation for severe acute kidney injury (AKIKI 2): a multicentre, open-label, randomised, controlled trial.
Lancet (London, England) 2021, 397, 1293-1300.

Ouldali N, Varon E, Levy C, Angoulvant F, Georges S, Ploy MC, Kempf M, Cremniter J, Cohen R, Bruhl DL, Danis K
Invasive pneumococcal disease incidence in children and adults in France during the pneumococcal conjugate vaccine era: an interrupted time-series analysis of data from a 17-year national prospective surveillance study.
The Lancet. Infectious Diseases 2021, 21, 137-147.

Wunderink RG, Matsunaga Y, Ariyasu M, Clevenbergh P, Echols R, Kaye KS, Kollef M, Menon A, Pogue JM, Shorr AF, Timsit JF, Zeitlinger M, Nagata TD
Cefiderocol versus high-dose, extended-infusion meropenem for the treatment of Gram-negative nosocomial pneumonia (APEKS-NP): a randomised, double-blind, phase 3, non-inferiority trial.
The Lancet. Infectious Diseases 2021, 21, 213-225.

Bettuzzi T, Jourdes A, Robineau O, Alcaraz I, Manda V, Molina JM, Mehlen M, Cazanave C, Tattevin P, Mensi S, Terrier B, Régent A, Ghosn J, Charlier C, Martin-Blondel G, Dupin N
Ceftriaxone compared with benzylpenicillin in the treatment of neurosyphilis in France: a retrospective multicentre study.
The Lancet. Infectious Diseases 2021, 21, 1441-1447.

ISARIC Clinical Characterisation Group
The value of open-source clinical science in pandemic response: lessons from ISARIC.
The Lancet. Infectious Diseases 2021, 21, 1623-1624.

Trøseid M, Hites M, Barratt-Due A, Ader F, Yazdanpanah Y
Assessing the evidence on remdesivir.
The Lancet. Infectious Diseases 2021, 21, 1630-1631.

CORIMUNO-19 Collaborative group
Effect of anakinra versus usual care in adults in hospital with COVID-19 and mild-to-moderate pneumonia (CORIMUNO-ANA-1): a randomised controlled trial.
The Lancet. Respiratory Medicine 2021, 9, 295-304.

Lebreton G, Schmidt M, Ponnaiah M, Folliguet T, Para M, Guihaire J, Lansac E, Sage E, Cholley B, Mégarbane B, Cronier P, Zarka J, Da Silva D, Besset S, Lacombat I, Mongardon N, Richard C, Duranteau J, Cerf C, Saiydoun G, Sonneville R, Chiche JD, Nataf P, Longrois D, Combes A, Leprince P, Paris ECMO-COVID-19 investigators
Extracorporeal membrane oxygenation network organisation and clinical outcomes during the COVID-19 pandemic in Greater Paris, France: a multicentre cohort study.
The Lancet. Respiratory Medicine 2021

Lescure FX, Honda H, Fowler RA, Lazar JS, Shi G, Wung P, Patel N, Hagino O, Sarilumab COVID-19 Global Study Group
Sarilumab in patients admitted to hospital with severe or critical COVID-19: a randomised, double-blind, placebo-controlled, phase 3 trial.
The Lancet. Respiratory Medicine 2021, 9, 522-532.

Ehrmann S, Li J, Ibarra-Estrada M, Perez Y, Pavlov I, McNicholas B, Roca O, Mirza S, Vines D, Garcia-Salcido R, Aguirre-Avalos G, Trump MW, Nay MA, Dellamonica J, Nseir S, Mogri I, Cosgrave D, Jayaraman D, Masclans JR, Laffey JG, Tavernier E, Awake Prone Positioning Meta-Trial Group
Awake prone positioning for COVID-19 acute hypoxaemic respiratory failure: a randomised, controlled, multinational, open-label meta-trial.
The Lancet. Respiratory Medicine 2021, 9, 1387-1395.

Pisani L, Algera AG, Neto AS, Azevedo L, Pham T, Paulus F, de Abreu MG, Pelosi P, Dondorp AM, Bellani G, Laffey JG, Schultz MJ, ERICC study investigators, LUNG SAFE study investigators, PRoVENT study investigators, PRoVENT-iMiC study investigators
Geoeconomic variations in epidemiology, ventilation management, and outcomes in invasively ventilated intensive care unit patients without acute respiratory distress syndrome: a pooled analysis of four observational studies.
The Lancet. Global Health 2021, S2214-109X(21)00485-X.

Molina JM, Yazdanpanah Y, Afani Saud A, Bettacchi C, Chahin Anania C, DeJesus E, Olsen Klopfer S, Grandhi A, Eves K, Robertson MN, Correll T, Hwang C, Hanna GJ, Sklar P
Islatravir in combination with doravirine for treatment-naive adults with HIV-1 infection receiving initial treatment with islatravir, doravirine, and lamivudine: a phase 2b, randomised, double-blind, dose-ranging trial.
The lancet. HIV 2021, 8, e324-e333.

Wei F, Gaisa MM, D'Souza G, Xia N, Giuliano AR, Hawes SE, Gao L, Cheng SH, Donà MG, Goldstone SE, Schim van der Loeff MF, Neukam K, Meites E, Poynten IM, Dai J, Combes JD, Wieland U, Burgos J, Wilkin TJ, Hernandez AL, Iribarren Díaz M, Hidalgo-Tenorio C, Valencia Arredondo M, Nyitray AG, Wentzensen N, Chow EP, Smelov V, Nowak RG, Phanuphak N, Woo YL, Choi Y, Hu Y, Schofield AM, Woestenberg PJ, Chikandiwa AT, Hickey AC, de Pokomandy A, Murenzi G, Péré H, Del Pino M, Ortiz AP, Charnot-Katsikas A, Liu X, Chariyalertsak S, Strong C, Ong JJ, Yunihastuti E, Etienney I, Ferré VM, Zou H, Segondy M, Chinyowa S, Alberts CJ, Clifford GM
Epidemiology of anal human papillomavirus infection and high-grade squamous intraepithelial lesions in 29 900 men according to HIV status, sexuality, and age: a collaborative pooled analysis of 64 studies.
The lancet. HIV 2021, 8, e531-e543.

Lindan CE, Mankad K, Ram D, Kociolek LK, Silvera VM, Boddaert N, Stivaros SM, Palasis S, ASPNR PECOBIG Collaborator Group
Neuroimaging manifestations in children with SARS-CoV-2 infection: a multinational, multicentre collaborative study.
The Lancet. Child & Adolescent Health 2021, 5, 167-177.

Lachassinne E, de Pontual L, Caseris M, Lorrot M, Guilluy C, Naud A, Dommergues MA, Pinquier D, Wannepain E, Hausherr E, Jung C, Gajdos V, Cohen R, Zahar JR, Brichler S, Basmaci R, Boelle PY, Bloch-Queyrat C, Aupiais C, COVIDOCRECHE collaborators
SARS-CoV-2 transmission among children and staff in daycare centres during a nationwide lockdown in France: a cross-sectional, multicentre, seroprevalence study.
The Lancet. Child & Adolescent Health 2021, 5, 256-264.

Ghazali DA, Delaire C, Blottiaux E, Lardeur JY, Jost D, Violeau M, Breque C, Oriot D
Development of a Performance Assessment Scale for Simulated Dispatcher-Assisted Cardiopulmonary Resuscitation (Telephone-CPR): A Multi-Center Randomized Simulation-Based Clinical Trial.
Prehospital and Disaster Medicine 2021, 36, 561-569.

Pellicer A, Fernández R, Jullien V, Gleeson C, Bravo MC, Ortego PL, Sánchez L, Ybarra M, Rojas-Anaya H, Cabañas F, Koch A, Smith A, Rabe H, Neocirculation Consortium
Pharmacokinetic study (phase I-II) of a new dobutamine formulation in preterm infants immediately after birth.
Pediatric Research 2021, 89, 981-986.

Novelli G, Liu J, Biancolella M, Alonzi T, Novelli A, Patten JJ, Cocciadiferro D, Agolini E, Colona VL, Rizzacasa B, Giannini R, Bigio B, Goletti D, Capobianchi MR, Grelli S, Mann J, McKee TD, Cheng K, Amanat F, Krammer F, Guarracino A, Pepe G, Tomino C, Tandjaoui-Lambiotte Y, Uzunhan Y, Tubiana S, Ghosn J, COVID Human Genetic Effort, French COVID Cohort Study Group, CoV-Contact Cohort, Notarangelo LD, Su HC, Abel L, Cobat A, Elhanan G, Grzymski JJ, Latini A, Sidhu SS, Jain S, Davey RA, Casanova JL, Wei W, Pandolfi PP
Inhibition of HECT E3 ligases as potential therapy for COVID-19.
Cell Death & Disease 2021, 12, 310.

Lepers C, Billiard S, Porte M, Méléard S, Tran VC
Inference with selection, varying population size, and evolving population structure: application of ABC to a forward-backward coalescent process with interactions.
Heredity 2021, 126, 335-350.

Pascucci M, Royer G, Adamek J, Asmar MA, Aristizabal D, Blanche L, Bezzarga A, Boniface-Chang G, Brunner A, Curel C, Dulac-Arnold G, Fakhri RM, Malou N, Nordon C, Runge V, Samson F, Sebastian E, Soukieh D, Vert JP, Ambroise C, Madoui MA
AI-based mobile application to fight antibiotic resistance.
Nature Communications 2021, 12, 1173.

Consuegra J, Gaffé J, Lenski RE, Hindré T, Barrick JE, Tenaillon O, Schneider D
Insertion-sequence-mediated mutations both promote and constrain evolvability during a long-term experiment with bacteria.
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van Werkhoven CH, Ducher A, Berkell M, Mysara M, Lammens C, Torre-Cisneros J, Rodríguez-Baño J, Herghea D, Cornely OA, Biehl LM, Bernard L, Dominguez-Luzon MA, Maraki S, Barraud O, Nica M, Jazmati N, Sablier-Gallis F, de Gunzburg J, Mentré F, Malhotra-Kumar S, Bonten MJM, Vehreschild MJGT, ANTICIPATE Study Group
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Berkell M, Mysara M, Xavier BB, van Werkhoven CH, Monsieurs P, Lammens C, Ducher A, Vehreschild MJGT, Goossens H, de Gunzburg J, Bonten MJM, Malhotra-Kumar S, ANTICIPATE study group
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Perreau M, Suffiotti M, Marques-Vidal P, Wiedemann A, Levy Y, Laouénan C, Ghosn J, Fenwick C, Comte D, Roger T, Regina J, Vollenweider P, Waeber G, Oddo M, Calandra T, Pantaleo G
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Maisonnasse P, Aldon Y, Marc A, Marlin R, Dereuddre-Bosquet N, Kuzmina NA, Freyn AW, Snitselaar JL, Gonçalves A, Caniels TG, Burger JA, Poniman M, Bontjer I, Chesnais V, Diry S, Iershov A, Ronk AJ, Jangra S, Rathnasinghe R, Brouwer PJM, Bijl TPL, van Schooten J, Brinkkemper M, Liu H, Yuan M, Mire CE, van Breemen MJ, Contreras V, Naninck T, Lemaître J, Kahlaoui N, Relouzat F, Chapon C, Ho Tsong Fang R, McDanal C, Osei-Twum M, St-Amant N, Gagnon L, Montefiori DC, Wilson IA, Ginoux E, de Bree GJ, García-Sastre A, Schotsaert M, Coughlan L, Bukreyev A, van der Werf S, Guedj J, Sanders RW, van Gils MJ, Le Grand R
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Rousset F, Cabezas-Caballero J, Piastra-Facon F, Fernández-Rodríguez J, Clermont O, Denamur E, Rocha EPC, Bikard D
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Nature Microbiology 2021, 6, 301-312.

Rousset F, Cabezas-Caballero J, Piastra-Facon F, Fernández-Rodríguez J, Clermont O, Denamur E, Rocha EPC, Bikard D
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Rousset F, Cabezas-Caballero J, Piastra-Facon F, Fernández-Rodríguez J, Clermont O, Denamur E, Rocha EPC, Bikard D
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Denamur E, Clermont O, Bonacorsi S, Gordon D
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Flament H, Rouland M, Beaudoin L, Toubal A, Bertrand L, Lebourgeois S, Rousseau C, Soulard P, Gouda Z, Cagninacci L, Monteiro AC, Hurtado-Nedelec M, Luce S, Bailly K, Andrieu M, Saintpierre B, Letourneur F, Jouan Y, Si-Tahar M, Baranek T, Paget C, Boitard C, Vallet-Pichard A, Gautier JF, Ajzenberg N, Terrier B, Pène F, Ghosn J, Lescure X, Yazdanpanah Y, Visseaux B, Descamps D, Timsit JF, Monteiro RC, Lehuen A
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Nature Immunology 2021, 22, 322-335.

Smith N, Goncalves P, Charbit B, Grzelak L, Beretta M, Planchais C, Bruel T, Rouilly V, Bondet V, Hadjadj J, Yatim N, Pere H, Merkling SH, Ghozlane A, Kernéis S, Rieux-Laucat F, Terrier B, Schwartz O, Mouquet H, Duffy D, Di Santo JP
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Nature Immunology 2021, 22, 1428-1439.

LeGoff J, Kernéis S, Elie C, Mercier-Delarue S, Gastli N, Choupeaux L, Fourgeaud J, Alby ML, Quentin P, Pavie J, Brazille P, Néré ML, Minier M, Gabassi A, Leroy C, Parfait B, Tréluyer JM, Delaugerre C
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Scientific Reports 2021, 11, 21126.

Ruault C, Zappella N, Labreuche J, Cronier P, Claude B, Garnier M, Vieillard-Baron A, Ortuno S, Mallet M, Cosic O, Crosby L, Lesieur O, Pichon N, Galbois A, Bruel C, Ekpe K, Sauneuf B, Roux D, Legriel S
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Scientific Reports 2021, 11, 21076.

Thomas M, Bonacorsi S, Simon AL, Mallet C, Lorrot M, Faye A, Dingulu G, Caseris M, Boneca IG, Aupiais C, Meinzer U
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Scientific Reports 2021, 11, 3422.

Boussion K, Zappella N, Grall N, Ribeiro-Parenti L, Papin G, Montravers P
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Scientific Reports 2021, 11, 5884.

Zaki SA, Naous J, Ghanem A, Abou Abbas D, Tomb R, Ghosn J, Assi A
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Scientific Reports 2021, 11, 9855.

Crawford C, Vanoli E, Decorde B, Lancelot M, Duprat C, Josserand C, Jilesen J, Bouadma L, Timsit JF
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Scientific Reports 2021, 11, 11778.

Courties A, Boussier J, Hadjadj J, Yatim N, Barnabei L, Péré H, Veyer D, Kernéis S, Carlier N, Pène F, Rieux-Laucat F, Charbit B, Bondet V, Duffy D, Berenbaum F, Terrier B, Sellam J
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Scientific Reports 2021, 11, 11886.

Bouaziz M, Mullaert J, Bigio B, Seeleuthner Y, Casanova JL, Alcais A, Abel L, Cobat A
Controlling for human population stratification in rare variant association studies.
Scientific Reports 2021, 11, 19015.

Gonthier MC, Gendron N, Eloy P, Bourrienne MC, Alhenc-Gelas M, Pouplard C, Tardy B, Szymezak J, Burdet C, Gkalea V, Faille D, Ajzenberg N
Heparin-induced Thrombocytopenia Diagnosis: A Retrospective Study Comparing Heparin-induced Platelet Activation Test to 14 C-serotonin Release Assay.
TH open: companion journal to thrombosis and haemostasis 2021, 5, e507-e512.

de Montmollin E, Timsit JF
How Antibiotics Stewardship Can Be Safely Implemented in Patients with Septic Shock?.
Seminars in Respiratory and Critical Care Medicine 2021, 42, 689-697.

Ouldali N, Belot A, Angoulvant F
Therapy for Multisystem Inflammatory Syndrome in Children.
The New England Journal of Medicine 2021, 385, e42.

WHO Solidarity Trial Consortium, Pan H, Peto R, Henao-Restrepo AM, Preziosi MP, Sathiyamoorthy V, Abdool Karim Q, Alejandria MM, Hernández García C, Kieny MP, Malekzadeh R, Murthy S, Reddy KS, Roses Periago M, Abi Hanna P, Ader F, Al-Bader AM, Alhasawi A, Allum E, Alotaibi A, Alvarez-Moreno CA, Appadoo S, Asiri A, Aukrust P, Barratt-Due A, Bellani S, Branca M, Cappel-Porter HBC, Cerrato N, Chow TS, Como N, Eustace J, García PJ, Godbole S, Gotuzzo E, Griskevicius L, Hamra R, Hassan M, Hassany M, Hutton D, Irmansyah I, Jancoriene L, Kirwan J, Kumar S, Lennon P, Lopardo G, Lydon P, Magrini N, Maguire T, Manevska S, Manuel O, McGinty S, Medina MT, Mesa Rubio ML, Miranda-Montoya MC, Nel J, Nunes EP, Perola M, Portolés A, Rasmin MR, Raza A, Rees H, Reges PPS, Rogers CA, Salami K, Salvadori MI, Sinani N, Sterne JAC, Stevanovikj M, Tacconelli E, Tikkinen KAO, Trelle S, Zaid H, Røttingen JA, Swaminathan S
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The New England Journal of Medicine 2021, 384, 497-511.

Bergwerk M, Gonen T, Lustig Y, Amit S, Lipsitch M, Cohen C, Mandelboim M, Levin EG, Rubin C, Indenbaum V, Tal I, Zavitan M, Zuckerman N, Bar-Chaim A, Kreiss Y, Regev-Yochay G
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The New England Journal of Medicine 2021

Néant N, Lingas G, Le Hingrat Q, Ghosn J, Engelmann I, Lepiller Q, Gaymard A, Ferré V, Hartard C, Plantier JC, Thibault V, Marlet J, Montes B, Bouiller K, Lescure FX, Timsit JF, Faure E, Poissy J, Chidiac C, Raffi F, Kimmoun A, Etienne M, Richard JC, Tattevin P, Garot D, Le Moing V, Bachelet D, Tardivon C, Duval X, Yazdanpanah Y, Mentré F, Laouénan C, Visseaux B, Guedj J, French COVID Cohort Investigators and French Cohort Study groups
Modeling SARS-CoV-2 viral kinetics and association with mortality in hospitalized patients from the French COVID cohort.
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Dupuis C, Timsit JF
Antibiotics in the first hour: is there new evidence?.
Expert Review of Anti-Infective Therapy 2021, 19, 45-54.

Diallo A, Carlos-Bolumbu M, Cervantes-Gonzalez M, Wozniak V, Diallo MH, Diallo BD, Delamou A, Galtier F
Immunogenicity and safety of Ebola virus vaccines in healthy adults: a systematic review and network meta-analysis.
Human Vaccines & Immunotherapeutics 2021, 17, 3771-3783.

Royer G, Roisin L, Demontant V, Lo S, Coutte L, Lim P, Pawlotsky JM, Jacquier H, Lepeule R, Rodriguez C, Woerther PL
Microdiversity of Enterococcus faecalis isolates in cases of infective endocarditis: selection of non-synonymous mutations and large deletions is associated with phenotypic modifications.
Emerging Microbes & Infections 2021, 10, 929-938.

Czuppon P, Blanquart F, Uecker H, Débarre F
The Effect of Habitat Choice on Evolutionary Rescue in Subdivided Populations.
The American Naturalist 2021, 197, 625-643.

Diallo MS, Samri A, Charpentier C, Bertine M, Cheynier R, Thiébaut R, Matheron S, Collin F, Braibant M, Candotti D, Brun-Vézinet F, Autran B, ANRS CO5 IMMUNOVIR-2 and ANRS CO15 ALT Study Groups
A Comparison of Cell Activation, Exhaustion, and Expression of HIV Coreceptors and Restriction Factors in HIV-1- and HIV-2-Infected Nonprogressors.
AIDS research and human retroviruses 2021, 37, 214-223.

Ghosn J, Abdoul H, Fellahi S, Merlet A, Salmon D, Morini JP, Deleuze J, Blacher J, Capeau J, Bastard JP, Viard JP
Prevalence of Silent Atherosclerosis and Other Comorbidities in an Outpatient Cohort of Adults Living with HIV: Associations with HIV Parameters and Biomarkers.
AIDS research and human retroviruses 2021, 37, 101-108.

Heilmann E, Gregoriano C, Annane D, Reinhart K, Bouadma L, Wolff M, Chastre J, Luyt CE, Tubach F, Branche AR, Briel M, Christ-Crain M, Welte T, Corti C, de Jong E, Nijsten M, de Lange DW, van Oers JAH, Beishuizen A, Girbes ARJ, Deliberato RO, Schroeder S, Kristoffersen KB, Layios N, Damas P, Lima SSS, Nobre V, Wei L, Oliveira CF, Shehabi Y, Stolz D, Tamm M, Verduri A, Wang JX, Drevet S, Gavazzi G, Mueller B, Schuetz P
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Age and Ageing 2021, 50, 1546-1556.

Poline J, Gaschignard J, Leblanc C, Madhi F, Foucaud E, Nattes E, Faye A, Bonacorsi S, Mariani P, Varon E, Smati-Lafarge M, Caseris M, Basmaci R, Lachaume N, Ouldali N
Systematic Severe Acute Respiratory Syndrome Coronavirus 2 Screening at Hospital Admission in Children: A French Prospective Multicenter Study.
Clinical Infectious Diseases: An Official Publication of the Infectious Diseases Society of America 2021, 72, 2215-2217.

Caby F, Guiguet M, Weiss L, Winston A, Miro JM, Konopnicki D, Le Moing V, Bonnet F, Reiss P, Mussini C, Poizot-Martin I, Taylor N, Skoutelis A, Meyer L, Goujard C, Bartmeyer B, Boesecke C, Antinori A, Quiros-Roldan E, Wittkop L, Frederiksen C, Castagna A, Thurnheer MC, Svedhem V, Jose S, Costagliola D, Mary-Krause M, Grabar S, (CD4/CD8 ratio and cancer risk) project Working Group for the Collaboration of Observational HIV Epidemiological Research Europe (COHERE) in EuroCoord
CD4/CD8 Ratio and the Risk of Kaposi Sarcoma or Non-Hodgkin Lymphoma in the Context of Efficiently Treated Human Immunodeficiency Virus (HIV) Infection: A Collaborative Analysis of 20 European Cohort Studies.
Clinical Infectious Diseases: An Official Publication of the Infectious Diseases Society of America 2021, 73, 50-59.

Veyer D, Kernéis S, Poulet G, Wack M, Robillard N, Taly V, L'Honneur AS, Rozenberg F, Laurent-Puig P, Bélec L, Hadjadj J, Terrier B, Péré H
Highly Sensitive Quantification of Plasma Severe Acute Respiratory Syndrome Coronavirus 2 RNA Sheds Light on its Potential Clinical Value.
Clinical Infectious Diseases: An Official Publication of the Infectious Diseases Society of America 2021, 73, e2890-e2897.

Buetti N, Patrier J, Le Hingrat Q, Loiodice A, Bouadma L, Visseaux B, Timsit JF
Risk Factors for Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) Detection in Blood of Critically Ill Patients.
Clinical Infectious Diseases: An Official Publication of the Infectious Diseases Society of America 2021, 72, e690-e691.

Hounkonnou CPA, Ndam NT, Fievet N, Accrombessi M, Yovo E, Mama A, Sossou D, Vianou B, Massougbodji A, Briand V, Cot M, Cottrell G
Suboptimal Intermittent Preventive Treatment in Pregnancy (IPTp) is Associated With an Increased Risk of Submicroscopic Plasmodium falciparum Infection in Pregnant Women: A Prospective Cohort Study in Benin.
Clinical Infectious Diseases: An Official Publication of the Infectious Diseases Society of America 2021, 73, e3759-e3767.

Yang DD, Ouldali N, Gajdos V, Thomas-Sertillanges R, Vasante L, Skurnik D, Angoulvant F
Common Pediatric Respiratory Infectious Diseases as Possible Early Predictor for New Wave of Severe Acute Respiratory Syndrome Coronavirus 2 Infections.
Clinical Infectious Diseases: An Official Publication of the Infectious Diseases Society of America 2021, 73, 358-359.

Buetti N, Mimoz O, Mermel L, Ruckly S, Mongardon N, Dupuis C, Mira JP, Lucet JC, Mégarbane B, Bailly S, Parienti JJ, Timsit JF
Ultrasound Guidance and Risk for Central Venous Catheter-Related Infections in the Intensive Care Unit: A Post Hoc Analysis of Individual Data of 3 Multicenter Randomized Trials.
Clinical Infectious Diseases: An Official Publication of the Infectious Diseases Society of America 2021, 73, e1054-e1061.

Berçot B, Charreau I, Rousseau C, Delaugerre C, Chidiac C, Pialoux G, Capitant C, Bourgeois-Nicolaos N, Raffi F, Pereyre S, Le Roy C, Senneville E, Meyer L, Bébéar C, Molina JM, ANRS IPERGAY Study Group
High Prevalence and High Rate of Antibiotic Resistance of Mycoplasma genitalium Infections in Men Who Have Sex With Men: A Substudy of the ANRS IPERGAY Pre-exposure Prophylaxis Trial.
Clinical Infectious Diseases: An Official Publication of the Infectious Diseases Society of America 2021, 73, e2127-e2133.

Skurnik D, Rybak A, Yang DD, Pons S, Guedj R, Levy C, Cohen R, Gajdos V, Vasante L, Ouldali N, Angoulvant F
Unexpected Lessons from the Coronavirus Disease 2019 Lockdowns in France: Low Impact of School Opening on Common Communicable Pediatric Airborne Diseases.
Clinical Infectious Diseases: An Official Publication of the Infectious Diseases Society of America 2021, 73, e2830-e2832.

Berzow D, Descamps D, Obermeier M, Charpentier C, Kaiser R, Guertler L, Eberle J, Wensing A, Sierra S, Ruelle J, Gomes P, Mansinho K, Taylor N, Jensen B, Döring M, Stürmer M, Rockstroh J, Camacho R
Human Immunodeficiency Virus-2 (HIV-2): A Summary of the Present Standard of Care and Treatment Options for Individuals Living with HIV-2 in Western Europe.
Clinical Infectious Diseases: An Official Publication of the Infectious Diseases Society of America 2021, 72, 503-509.

Atkinson A, Zwahlen M, Barger D, d'Arminio Monforte A, De Wit S, Ghosn J, Girardi E, Svedhem V, Morlat P, Mussini C, Noguera-Julian A, Stephan C, Touloumi G, Kirk O, Mocroft A, Reiss P, Miro JM, Carpenter JR, Furrer H, Opportunistic Infections Project Working Group of the Collaboration of Observational HIV Epidemiological Research Europe (COHERE) in EuroCoord
Withholding Primary Pneumocystis Pneumonia Prophylaxis in Virologically Suppressed Patients With Human Immunodeficiency Virus: An Emulation of a Pragmatic Trial in COHERE.
Clinical Infectious Diseases: An Official Publication of the Infectious Diseases Society of America 2021, 73, 195-202.

Duval X, Le Moing V, Tubiana S, Esposito-Farèse M, Ilic-Habensus E, Leclercq F, Bourdon A, Goehringer F, Selton-Suty C, Chevalier E, Boutoille D, Piriou N, Le Tourneau T, Chirouze C, Seronde MF, Morel O, Piroth L, Eicher JC, Humbert O, Revest M, Thébault E, Devillers A, Delahaye F, Boibieux A, Grégoire B, Hoen B, Laouenan C, Iung B, Rouzet F, AEPEI-TEPvENDO study group
Impact of Systematic Whole-body 18F-Fluorodeoxyglucose PET/CT on the Management of Patients Suspected of Infective Endocarditis: The Prospective Multicenter TEPvENDO Study.
Clinical Infectious Diseases: An Official Publication of the Infectious Diseases Society of America 2021, 73, 393-403.

Temime L, Gustin MP, Duval A, Buetti N, Crépey P, Guillemot D, Thiébaut R, Vanhems P, Zahar JR, Smith DRM, Opatowski L
A Conceptual Discussion About the Basic Reproduction Number of Severe Acute Respiratory Syndrome Coronavirus 2 in Healthcare Settings.
Clinical Infectious Diseases: An Official Publication of the Infectious Diseases Society of America 2021, 72, 141-143.

Angoulvant F, Ouldali N, Yang DD, Filser M, Gajdos V, Rybak A, Guedj R, Soussan-Banini V, Basmaci R, Lefevre-Utile A, Brun-Ney D, Beaujouan L, Skurnik D
Coronavirus Disease 2019 Pandemic: Impact Caused by School Closure and National Lockdown on Pediatric Visits and Admissions for Viral and Nonviral Infections-a Time Series Analysis.
Clinical Infectious Diseases: An Official Publication of the Infectious Diseases Society of America 2021, 72, 319-322.

Dudoignon E, Caméléna F, Deniau B, Habay A, Coutrot M, Ressaire Q, Plaud B, Berçot B, Dépret F
Bacterial Pneumonia in COVID-19 Critically Ill Patients: A Case Series.
Clinical Infectious Diseases: An Official Publication of the Infectious Diseases Society of America 2021, 72, 905-906.

Cohen R, Levy C, Ouldali N, Goldrey M, Béchet S, Bonacorsi S, Varon E
Invasive Disease Potential of Pneumococcal Serotypes in Children After PCV13 Implementation.
Clinical Infectious Diseases: An Official Publication of the Infectious Diseases Society of America 2021, 72, 1453-1456.

Contejean A, Leporrier J, Canouï E, Alby-Laurent F, Lafont E, Beaudeau L, Parize P, Lecieux F, Greffet A, Chéron G, Gauzit R, Fourgeaud J, L'Honneur AS, Tréluyer JM, Charlier C, Casetta A, Frange P, Leruez-Ville M, Rozenberg F, Lortholary O, Kernéis S
Comparing Dynamics and Determinants of Severe Acute Respiratory Syndrome Coronavirus 2 Transmissions Among Healthcare Workers of Adult and Pediatric Settings in Central Paris.
Clinical Infectious Diseases: An Official Publication of the Infectious Diseases Society of America 2021, 72, 257-264.

Sax PE, Rockstroh JK, Luetkemeyer AF, Yazdanpanah Y, Ward D, Trottier B, Rieger A, Liu H, Acosta R, Collins SE, Brainard DM, Martin H, GS-US-380–4030 Investigators
Switching to Bictegravir, Emtricitabine, and Tenofovir Alafenamide in Virologically Suppressed Adults With Human Immunodeficiency Virus.
Clinical Infectious Diseases: An Official Publication of the Infectious Diseases Society of America 2021, 73, e485-e493.

Zucman N, Uhel F, Descamps D, Roux D, Ricard JD
Severe Reinfection With South African Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) Variant 501Y.V2.
Clinical Infectious Diseases: An Official Publication of the Infectious Diseases Society of America 2021, 73, 1945-1946.

Betton M, Livrozet M, Planas D, Fayol A, Monel B, Védie B, Bruel T, Tartour E, Robillard N, Manuguerra JC, Blanchard A, Ghosn J, Visseaux B, Péré H, Lebeaux D, Schwartz O, Veyer D, Hulot JS, French COVID Cohort Study Group
Sera Neutralizing Activities Against Severe Acute Respiratory Syndrome Coronavirus 2 and Multiple Variants 6 Months After Hospitalization for Coronavirus Disease 2019.
Clinical Infectious Diseases: An Official Publication of the Infectious Diseases Society of America 2021, 73, e1337-e1344.

Contou D, Colin G, Travert B, Jochmans S, Conrad M, Lascarrou JB, Painvin B, Ferré A, Schnell D, La Combe B, Coudroy R, Ehrmann S, Rambaud J, Wiedemann A, Asfar P, Kalfon P, Guérot E, Préau S, Argaud L, Daviet F, Dellamonica J, Dupont A, Fartoukh M, Kamel T, Béduneau G, Canouï-Poitrine F, Boutin E, Lina G, Dessap AM, Tristant A, de Prost N, French m-TSS Study Group
Menstrual toxic shock syndrome: a French nationwide multicenter retrospective study.
Clinical Infectious Diseases: An Official Publication of the Infectious Diseases Society of America 2021

Bruneau T, Wack M, Poulet G, Robillard N, Philippe A, Laurent-Puig P, Bélec L, Hadjadj J, Xiao W, Kallberg JL, Kernéis S, Diehl JL, Terrier B, Smadja D, Taly V, Veyer D, Péré H
Circulating ubiquitous RNA, a highly predictive and prognostic biomarker in hospitalized COVID-19 patients.
Clinical Infectious Diseases: An Official Publication of the Infectious Diseases Society of America 2021, ciab997.

Buchan BW, Armand-Lefevre L, Anderson N
Molecular Diagnosis of Pneumonia (Including Multiplex Panels).
Clinical Chemistry 2021, 68, 59-68.

Vulesevic B, Kubota N, Burwash IG, Cimadevilla C, Tubiana S, Duval X, Nguyen V, Arangalage D, Chan KL, Mulvihill EE, Beauchesne L, Messika-Zeitoun D
Size-adjusted aortic valve area: refining the definition of severe aortic stenosis.
European Heart Journal. Cardiovascular Imaging 2021, 22, 1142-1148.

Tarhini H, Recoing A, Bridier-Nahmias A, Rahi M, Lambert C, Martres P, Lucet JC, Rioux C, Bouzid D, Lebourgeois S, Descamps D, Yazdanpanah Y, Le Hingrat Q, Lescure FX, Visseaux B
Long-Term Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) Infectiousness Among Three Immunocompromised Patients: From Prolonged Viral Shedding to SARS-CoV-2 Superinfection.
The Journal of Infectious Diseases 2021, 223, 1522-1527.

Goupil de Bouillé J, Vigouroux C, Plessis L, Ghislain M, Teglas JP, Boufassa F, Goujard C, Vignes D, Bouchaud O, Salmon D, Meyer L, Abgrall S, ANRS CO9-COPANA study group
Factors Associated With Being Overweight and Obesity in People Living With Human Immunodeficiency Virus on Antiretroviral Therapy: Socioclinical, Inflammation, and Metabolic Markers.
The Journal of Infectious Diseases 2021, 224, 1570-1580.

Pelleau S, Woudenberg T, Rosado J, Donnadieu F, Garcia L, Obadia T, Gardais S, Elgharbawy Y, Velay A, Gonzalez M, Nizou JY, Khelil N, Zannis K, Cockram C, Merkling SH, Meola A, Kerneis S, Terrier B, de Seze J, Planas D, Schwartz O, Dejardin F, Petres S, von Platen C, Pellerin SF, Arowas L, de Facci LP, Duffy D, Cheallaigh CN, Dunne J, Conlon N, Townsend L, Duong V, Auerswald H, Pinaud L, Tondeur L, Backovic M, Hoen B, Fontanet A, Mueller I, Fafi-Kremer S, Bruel T, White M
Kinetics of the Severe Acute Respiratory Syndrome Coronavirus 2 Antibody Response and Serological Estimation of Time Since Infection.
The Journal of Infectious Diseases 2021, 224, 1489-1499.

Hadad R, Cole MJ, Ebeyan S, Jacobsson S, Tan LY, Golparian D, Erskine S, Day M, Whiley D, Unemo M, European collaborative group
Evaluation of the SpeeDx ResistancePlus® GC and SpeeDx GC 23S 2611 (beta) molecular assays for prediction of antimicrobial resistance/susceptibility to ciprofloxacin and azithromycin in Neisseria gonorrhoeae.
The Journal of Antimicrobial Chemotherapy 2021, 76, 84-90.

Lê MP, Peiffer-Smadja N, Guedj J, Neant N, Mentré F, Ader F, Yazdanpanah Y, Peytavin G, C21DFSC
Rationale of a loading dose initiation for hydroxychloroquine treatment in COVID-19 infection in the DisCoVeRy trial-authors' response.
The Journal of Antimicrobial Chemotherapy 2021, 76, 277-279.

Palich R, Allavena C, Peytavin G, Soulie C, Tubiana R, Weiss L, Montoya Ferrer A, Duvivier C, Bouchaud O, Bottero J, Durand A, Lê MP, Marcelin AG, Dudoit Y, Assoumou L, Katlama C, ETRAL QD study group
Once-daily etravirine/raltegravir (400/800 mg q24h) dual therapy maintains viral suppression over 48 weeks in HIV-infected patients switching from a twice-daily etravirine/raltegravir (200/400 mg q12h) regimen.
The Journal of Antimicrobial Chemotherapy 2021, 76, 477-481.

Force G, Ghout I, Ropers J, Carcelain G, Marigot-Outtandy D, Hahn V, Darchy N, Defferriere H, Bouaziz-Amar E, Carlier R, Dorgham K, Callebert J, Peytavin G, Delaugerre C, de Truchis P, NEURO+3 STUDY GROUP
Improvement of HIV-associated neurocognitive disorders after antiretroviral therapy intensification: the Neuro+3 study.
The Journal of Antimicrobial Chemotherapy 2021, 76, 743-752.

Kernéis S, Lucet JC, Santoro A, Meschiari M
Individual and collective impact of Klebsiella pneumoniae carbapenemase (KPC)-producing K. pneumoniae in patients admitted to the ICU.
The Journal of Antimicrobial Chemotherapy 2021, 76, i19-i26.

Contejean A, Tisseyre M, Canouï E, Treluyer JM, Kerneis S, Chouchana L
Combination of vancomycin plus piperacillin and risk of acute kidney injury: a worldwide pharmacovigilance database analysis.
The Journal of Antimicrobial Chemotherapy 2021, 76, 1311-1314.

Le Roy C, Touati A, Balcon C, Garraud J, Molina JM, Berçot B, de Barbeyrac B, Pereyre S, Peuchant O, Bébéar C
Identification of 16S rRNA mutations in Mycoplasma genitalium potentially associated with tetracycline resistance in vivo but not selected in vitro in M. genitalium and Chlamydia trachomatis.
The Journal of Antimicrobial Chemotherapy 2021, 76, 1150-1154.

Unemo M, Ahlstrand J, Sánchez-Busó L, Day M, Aanensen D, Golparian D, Jacobsson S, Cole MJ, European Collaborative Group
High susceptibility to zoliflodacin and conserved target (GyrB) for zoliflodacin among 1209 consecutive clinical Neisseria gonorrhoeae isolates from 25 European countries, 2018.
The Journal of Antimicrobial Chemotherapy 2021, 76, 1221-1228.

Palich R, Abdi B, Wirden M, Lourida G, Tubiana R, Faycal A, Valantin MA, Schneider L, Seang S, Agher R, Simon A, Soulie C, Le MP, Peytavin G, Calvez V, Marcelin AG, Katlama C
Intermittent two-drug antiretroviral therapies maintain long-term viral suppression in real life in highly experienced HIV-infected patients.
The Journal of Antimicrobial Chemotherapy 2021, 76, 1893-1897.

Contejean A, Charlier C, Treluyer JM, Kernéis S, Chouchana L
A worldwide pharmacovigilance database analysis to assess the risk of acute kidney injury in patients receiving teicoplanin in association with piperacillin, cefepime or meropenem.
The Journal of Antimicrobial Chemotherapy 2021, 76, 2221-2223.

Charpentier C, Storto A, Soulié C, Ferré VM, Wirden M, Joly V, Lambert-Niclot S, Palich R, Morand-Joubert L, Landman R, Lacombe K, Katlama C, Ghosn J, Marcelin AG, Calvez V, Descamps D
Prevalence of genotypic baseline risk factors for cabotegravir + rilpivirine failure among ARV-naive patients.
The Journal of Antimicrobial Chemotherapy 2021

Charpentier C, Storto A, Soulié C, Ferré VM, Wirden M, Joly V, Lambert-Niclot S, Palich R, Morand-Joubert L, Landman R, Lacombe K, Katlama C, Ghosn J, Marcelin AG, Calvez V, Descamps D
Prevalence of genotypic baseline risk factors for cabotegravir + rilpivirine failure among ARV-naive patients.
The Journal of Antimicrobial Chemotherapy 2021, 76, 2983-2987.

Le Turnier P, El Helali N, Guilhaumou R, Pilmis B, Revest M, Velly LJ, Leroy AG, Duval X, Lemaitre F, Gregoire M, DIFCEFO study group
CSF concentration of cefotaxime in adult patients with pneumococcal meningitis: a multicentre retrospective study.
The Journal of Antimicrobial Chemotherapy 2021, 76, 2352-2355.

Bachelard A, Isernia V, Vallois D, Le Gac S, Chalal L, Landman R, Damond F, Descamps D, Yazdanpanah Y, Peytavin G, Ghosn J
Efficacy and tolerability of combined antiretroviral treatment with bictegravir/emtricitabine/tenofovir alafenamide initiated at the time of primary HIV infection.
The Journal of Antimicrobial Chemotherapy 2021, 76, 2484-2485.

Marcelin AG, Charpentier C, Bellecave P, Abdi B, Chaix ML, Ferre V, Raymond S, Fofana D, Bocket L, Mirand A, Le Guillou-Guillemette H, Montes B, Amiel C, Pallier C, Fafi-Kremer S, De Monte A, Alessandri-Gradt E, Scholtes C, Maillard A, Jeulin H, Bouvier-Alias M, Roussel C, Dos Santos G, Signori-Schmuck A, Dina J, Vallet S, Stefic K, Soulié C, Calvez V, Descamps D, Flandre P, ANRS-MIE AC43 Group
Factors associated with the emergence of integrase resistance mutations in patients failing dual or triple integrase inhibitor-based regimens in a French national survey.
The Journal of Antimicrobial Chemotherapy 2021, 76, 2400-2406.

Martin C, Gracias S, Charpentier C, Descamps D, Le Hingrat Q, Plantier JC, Alessandri-Gradt E
HIV-1 non-group M phenotypic susceptibility in vitro to bictegravir and cabotegravir.
The Journal of Antimicrobial Chemotherapy 2021, 76, 2306-2309.

Lê MP, Pencolé L, Peytavin G, Bouchet-Crivat F, Mandelbrot L
Placental transfer of doravirine, a recent HIV-1 NNRTI in the ex vivo human cotyledon perfusion model.
The Journal of Antimicrobial Chemotherapy 2021, 76, 2364-2367.

Royer G, Poirel L, La Combe B, Clermont O, Chau F, Mercier-Darty M, Denamur E, Nordmann P, Ricard JD, Decousser JW
Lack of association between colistin resistance and chlorhexidine reduced susceptibility in clinical isolates of Escherichia coli.
The Journal of Antimicrobial Chemotherapy 2021, 76, 2736-2737.

Bouzid D, Casalino E, Mullaert J, Laurent O, Duval X, Lescure FX, Peiffer Smadja N, Tubiana S, Armand Lefèvre L, Descamps D, Fidouh N, Choquet C, Lucet JC, Visseaux B
Added value of rapid respiratory syndromic testing at point of care versus central laboratory testing: a controlled clinical trial.
The Journal of Antimicrobial Chemotherapy 2021, 76, iii20-iii27.

Bouzid D, Vila J, Hansen G, Manissero D, Pareja J, Rao SN, Visseaux B
Systematic review on the association between respiratory virus real-time PCR cycle threshold values and clinical presentation or outcomes.
The Journal of Antimicrobial Chemotherapy 2021, 76, iii33-iii49.

Zahr N, Urien S, Aubry A, Chauvin C, Comets E, Llopis B, Tissot N, Noe G, Fourniols E, Jaureguiberry S, Bleibtreu A, Funck-Brentano C, Centre de Référence pour le traitement des Infections Ostéo-Articulaires Complexes (CRIOAC) Pitié-Salpêtrière Hospital
Ciprofloxacin population pharmacokinetics during long-term treatment of osteoarticular infections.
The Journal of Antimicrobial Chemotherapy 2021, 76, 2906-2913.

Birgy A, Madhi F, Jung C, Levy C, Cointe A, Bidet P, Hobson CA, Bechet S, Sobral E, Vuthien H, Ferroni A, Aberrane S, Cuzon G, Beraud L, Gajdos V, Launay E, Pinquier D, Haas H, Desmarest M, Dommergues MA, Cohen R, Bonacorsi S, Group of the National Observatory of Urinary tract Infection due to ESBL-producing Enterobacteriaceae in children
Clavulanate combinations with mecillinam, cefixime or cefpodoxime against ESBL-producing Enterobacterales frequently associated with blaOXA-1 in a paediatric population with febrile urinary tract infections.
The Journal of Antimicrobial Chemotherapy 2021, 76, 2839-2846.

Montravers P, Esposito-Farèse M, Lasocki S, Grall N, Veber B, Eloy P, Seguin P, Weiss E, Dupont H
Risk factors for therapeutic failure in the management of post-operative peritonitis: a post hoc analysis of the DURAPOP trial.
The Journal of Antimicrobial Chemotherapy 2021, dkab307.

Gelé T, Chéret A, Castro Gordon A, Nkam L, Furlan V, Pallier C, Becker PH, Catalan P, Goujard C, Taburet AM, Gasnault J, Gouget H, Barrail-Tran A
Cerebrospinal fluid exposure to bictegravir/emtricitabine/tenofovir in HIV-1-infected patients with CNS impairment.
The Journal of Antimicrobial Chemotherapy 2021, 76, 3280-3285.

Deschanvres C, Reynes J, Lamaury I, Rey D, Palich R, Bani-Sadr F, Robineau O, Duvivier C, Hocqueloux L, Cuzin L, Joly V, Raffi F, Cabie A, Allavena C, Dat’AIDS Study Group
Dolutegravir-based dual maintenance regimens combined with lamivudine/emtricitabine or rilpivirine: risk of virological failure in a real-life setting.
The Journal of Antimicrobial Chemotherapy 2021, 77, 196-204.

Le Menestrel A, Guerin F, Chau F, Massias L, Benchetrit L, Cattoir V, Fantin B, de Lastours V
Activity of the combination of colistin and fosfomycin against NDM-1-producing Escherichia coli with variable levels of susceptibility to colistin and fosfomycin in a murine model of peritonitis.
The Journal of Antimicrobial Chemotherapy 2021, 77, 155-163.

Chaussade H, Cazals X, Desoubeaux G, Jouvion G, Bougnoux ME, Lefort A, Rivoisy C, Desnos-Ollivier M, Chretien F, Chouaki T, Gruson B, Bernard L, Lortholary O, Lanternier F, French Mycosis study group
Central nervous system candidiasis beyond neonates: Lessons from a nationwide study.
Medical Mycology 2021, 59, 266-277.

Bronnimann D, Garcia-Hermoso D, Dromer F, Lanternier F
Scedosporiosis/lomentosporiosis observational study (SOS): Clinical significance of Scedosporium species identification..
Medical mycology 2021, 59, 486-497.

Contejean A, Leporrier J, Canouï E, Fourgeaud J, Mariaggi AA, Alby-Laurent F, Lafont E, Beaudeau L, Rouzaud C, Lecieux F, Greffet A, L'Honneur AS, Tréluyer JM, Lanternier F, Casetta A, Frange P, Leruez-Ville M, Rozenberg F, Lortholary O, Kernéis S
Transmission Routes of Severe Acute Respiratory Syndrome Coronavirus 2 Among Healthcare Workers of a French University Hospital in Paris, France.
Open Forum Infectious Diseases 2021, 8, ofab054.

Dupuis C, Le Bihan C, Maubon D, Calvet L, Ruckly S, Schwebel C, Bouadma L, Azoulay E, Cornet M, Timsit JF, Empiricus Study Group
Performance of Repeated Measures of (1-3)-β-D-Glucan, Mannan Antigen, and Antimannan Antibodies for the Diagnosis of Invasive Candidiasis in ICU Patients: A Preplanned Ancillary Analysis of the EMPIRICUS Randomized Clinical Trial.
Open Forum Infectious Diseases 2021, 8, ofab080.

Lecorche E, Daniau C, La K, Mougari F, Benmansour H, Kumanski S, Robert J, Fournier S, Lebreton G, Carbonne A, Cambau E, CNR-MyRMA
Mycobacterium chimaera Genomics With Regard to Epidemiological and Clinical Investigations Conducted for an Open Chest Postsurgical Mycobacterium chimaera Infection Outbreak.
Open Forum Infectious Diseases 2021, 8, ofab192.

Kernéis S, Planas D, Imbeaud S, Staropoli I, Puech J, Robillard N, Rodary J, Bruel T, Vieillard T, Schwartz O, Belec L, Péré H, Veyer D
Transmission of SARS-CoV-2 Alpha Variant (B.1.1.7) From a BNT162b2-Vaccinated Individual.
Open Forum Infectious Diseases 2021, 8, ofab369.

Smith GHR, Henry WK, Podzamczer D, Masiá MDM, Bettacchi CJ, Arasteh K, Jaeger H, Khuong-Josses MA, Montes-Ramírez ML, Stellbrink HJ, Yazdanpanah Y, Richmond GJ, Sutton KC, Zhang F, McCoig CC, St Clair MH, Vandermeulen K, Van Solingen-Ristea R, Smith KY, Margolis DA, Spreen WR
Efficacy, Safety, and Durability of Long-Acting Cabotegravir and Rilpivirine in Adults With Human Immunodeficiency Virus Type 1 Infection: 5-Year Results From the LATTE-2 Study.
Open Forum Infectious Diseases 2021, 8, ofab439.

Chezel J, Costedoat-Chalumeau N, Laouénan C, Rouzaud D, Chenevier-Gobeaux C, Le Guern V, Mathian A, Belhadi D, de Almeida Chaves S, Duhaut P, Fain O, Galicier L, Ghillani-Dalbin P, Kahn JE, Morel N, Perard L, Pha M, Saidoune F, Sarrot-Reynauld F, Aumaitre O, Chasset F, Limal N, Desmurs-Clavel H, Ackermann F, Amoura Z, Papo T, Sacre K
Highly sensitive serum cardiac troponin T and cardiovascular events in patients with systemic lupus erythematosus (TROPOPLUS study).
Rheumatology (Oxford, England) 2021, 60, 1210-1215.

Visseaux B, Bertine M, Le Hingrat Q, Ferré V, Charpentier C, Collin F, Damond F, Matheron S, Hué S, Descamps D
HIV-2 diversity displays two clades within group A with distinct geographical distribution and evolution.
Virus Evolution 2021, 7, veab024.

Dupuis C, Bouadma L, de Montmollin E, Goldgran-Toledano D, Schwebel C, Reignier J, Neuville M, Ursino M, Siami S, Ruckly S, Alberti C, Mourvillier B, Bailly S, Grapin K, Laurent V, Buetti N, Gainnier M, Souweine B, Timsit JF
Association Between Early Invasive Mechanical Ventilation and Day-60 Mortality in Acute Hypoxemic Respiratory Failure Related to Coronavirus Disease-2019 Pneumonia.
Critical Care Explorations 2021, 3, e0329.

de Montmollin E, Schwebel C, Dupuis C, Garrouste-Orgeas M, da Silva D, Azoulay E, Laurent V, Thiéry G, Grinea A, Marcotte G, Oziel J, Gainnier M, Siami S, Reignier J, Sztrymf B, Adrie C, Ruckly S, Sonneville R, Timsit JF
Life Support Limitations in Mechanically Ventilated Stroke Patients.
Critical Care Explorations 2021, 3, e0341.

Flahault C, Trosdorf M, Sonrier M, Vioulac C, Fasse L, Timsit JF, Bailly S, Garrouste-Orgeas M
ICU Survivors Experience of ICU Diaries: An Ancillary Qualitative Analysis of the ICU Diary Study.
Critical Care Explorations 2021, 3, e0384.

Demiselle J, Seegers V, Lemerle M, Meziani F, Grelon F, Megarbane B, Anguel N, Mira JP, Dequin PF, Gergaud S, Weiss N, Legay F, Le Tulzo Y, Conrad M, Robert R, Gonzalez F, Guitton C, Tamion F, Tonnelier JM, Bédos JP, Van Der Linden T, Vieillard-Baron A, Mariotte E, Pradel G, Lesieur O, Ricard JD, Hervé F, du Cheyron D, Guerin C, Teboul JL, Helms J, Radermacher P, Asfar P
Prior Exposure to Angiotensin II Receptor Blockers in Patients With Septic Shock to Individualize Mean Arterial Pressure Target? A Post Hoc Analysis of the Sepsis and Mean Arterial Pressure (SEPSISPAM) Trial.
Critical Care Medicine 2021, 49, e412-e422.

Legouy C, Girard-Stein L, Wanono R, de Montmollin E, Vellieux G, Bouadma L, Dupuis C, Abid S, Vinclair C, Ruckly S, Rouvel-Tallec A, d'Ortho MP, Timsit JF, Sonneville R
Association of Standard Electroencephalography Findings With Mortality and Command Following in Mechanically Ventilated Patients Remaining Unresponsive After Sedation Interruption.
Critical Care Medicine 2021, 49, e423-e432.

Lahens A, Mullaert J, Gressens S, Gault N, Flamant M, Deconinck L, Joly V, Yazdanpanah Y, Lescure FX, Vidal-Petiot E
Association between renin-angiotensin-aldosterone system blockers and outcome in coronavirus disease 2019: analysing in-hospital exposure generates a biased seemingly protective effect of treatment.
Journal of Hypertension 2021, 39, 367-375.

Cogo H, Caseris M, Lachaume N, Cointe A, Faye A, Pommelet V
Tuberculosis in Children Hospitalized in a Low-burden Country: Description and Risk Factors of Severe Disease.
The Pediatric Infectious Disease Journal 2021, 40, 199-204.

Cohen R, Béchet S, Gelbert N, Frandji B, Vie Le Sage F, Thiebault G, Kochert F, Cahn-Sellem F, Werner A, Ouldali N, Levy C
New Approach to the Surveillance of Pediatric Infectious Diseases From Ambulatory Pediatricians in the Digital Era.
The Pediatric Infectious Disease Journal 2021, 40, 674-680.

Ansquer R, Oriot D, Ghazali DA
Evaluation of Learning Effectiveness After a Simulation-Based Training Pediatric Course for Emergency Physicians.
Pediatric Emergency Care 2021, 37, e1186-e1191.

Oriot D, Trigolet M, Kessler DO, Auerbach MA, Ghazali DA
Stress: A Factor Explaining the Gap Between Simulated and Clinical Procedure Success.
Pediatric Emergency Care 2021, 37, e1192-e1196.

Aubin J, Rivolet O, Taunay AL, Ragot S, Ghazali DA, Oriot D
Benefit of Simulation-Based Training in Medical Adverse Events Disclosure in Pediatrics.
Pediatric Emergency Care 2021

Sibiude J, Le Chenadec J, Mandelbrot L, Dollfus C, Matheron S, Lelong N, Avettand-Fenoel V, Brossard M, Frange P, Reliquet V, Warszawski J, Tubiana R, EPF study group
Risk of birth defects and perinatal outcomes in HIV-infected women exposed to integrase strand inhibitors during pregnancy.
AIDS (London, England) 2021, 35, 219-226.

Hassold N, Baltes V, Martin A, Méchaï F, Bouchaud O, Cordel H
Hemorrhagic cystitis from BK virus in a patient with AIDS.
AIDS (London, England) 2021, 35, 999-1001.

Ronchetti AM, Matheron S, Galicier L, Damond F, Mahjoub N, Chaghil N, Meignin V, Mechaï F, Simon F, Oksenhendler E, Gérard L
Lymphoma in HIV-2-infected patients in combination antiretroviral therapy era.
AIDS (London, England) 2021, 35, 2299-2309.

Chas J, Bauer R, Larabi IA, Peytavin G, Roux P, Cua E, Cotte L, Pasquet A, Capitant C, Meyer L, Raffi F, Spire B, Pialoux G, Molina JM, Alvarez JC
Evaluation of Drug Abuse by Hair Analysis and Self-Reported Use Among MSM Under PrEP: Results From a French Substudy of the ANRS-IPERGAY Trial.
Journal of Acquired Immune Deficiency Syndromes (1999) 2021, 86, 552-561.

Kerneis S, Visseaux B, Armand-Lefevre L, Timsit JF
Molecular diagnostic methods for pneumonia: how can they be applied in practice?.
Current Opinion in Infectious Diseases 2021, 34, 118-125.

Tabah A, Buetti N, Barbier F, Timsit JF
Current opinion in management of septic shock due to Gram-negative bacteria.
Current Opinion in Infectious Diseases 2021, 34, 718-727.

Grillet GR, Bouju PM, Le Pabic EM, Guinier DJ, Norwood JD, La Combe BS
An Innovative Biological Model for Ultrasound-Guided Central Venous Access Simulation.
Simulation in Healthcare: Journal of the Society for Simulation in Healthcare 2021, 16, 362-366.

Hogan J, Kwon T, Paye-Jaouen A, Fait C, Cointe A, Baudouin V
Kidney Transplantation in a COVID-19 Positive Pediatric Recipient.
Transplantation 2021

Czuppon P, Schertzer E, Blanquart F, Débarre F
The stochastic dynamics of early epidemics: probability of establishment, initial growth rate, and infection cluster size at first detection.
Journal of the Royal Society, Interface 2021, 18, 20210575.

Petitjean M, Condamine B, Burdet C, Denamur E, Ruppé E
Phylum barrier and Escherichia coli intra-species phylogeny drive the acquisition of antibiotic-resistance genes.
Microbial Genomics 2021

Armand-Lefèvre L, Rondinaud E, Desvillechabrol D, Mullaert J, Clermont O, Petitjean M, Ruppe E, Cokelaer T, Bouchier C, Tenaillon O, Ma L, Nooroya Y, Matheron S, The Voyag-R Study Group , Andremont A, Denamur E, Kennedy SP
Dynamics of extended-spectrum beta-lactamase-producing Enterobacterales colonization in long-term carriers following travel abroad.
Microbial Genomics 2021, 7, 000576.

Petitjean M, Juarez P, Meunier A, Daguindau E, Puja H, Bertrand X, Valot B, Hocquet D
The rise and the fall of a Pseudomonas aeruginosa endemic lineage in a hospital.
Microbial Genomics 2021, 7, 000629.

Clermont O, Condamine B, Dion S, Gordon DM, Denamur E
The E phylogroup of Escherichia coli is highly diverse and mimics the whole E. coli species population structure.
Environmental Microbiology 2021, 23, 7139-7151.

Abramowitz L, Mandelbrot L, Bourgeois Moine A, Tohic AL, Carne Carnavalet C, Poujade O, Roy C, Tubach F
Caesarean section in the second delivery to prevent anal incontinence after asymptomatic obstetric anal sphincter injury: the EPIC multicentre randomised trial.
BJOG: an international journal of obstetrics and gynaecology 2021, 128, 685-693.

Tebeka S, Le Strat Y, Mandelbrot L, Benachi A, Dommergues M, Kayem G, Lepercq J, Luton D, Ville Y, Ramoz N, Mullaert J, Dubertret C, IGEDEPP Groups
Early- and late-onset postpartum depression exhibit distinct associated factors: the IGEDEPP prospective cohort study.
BJOG: an international journal of obstetrics and gynaecology 2021, 128, 1683-1693.

Poynard T, Paradis V, Mullaert J, Deckmyn O, Gault N, Marcault E, Manchon P, Si Mohammed N, Parfait B, Ibberson M, Gautier JF, Boitard C, Czernichow S, Larger E, Drane F, Castille JM, Peta V, Brzustowski A, Terris B, Vallet-Pichard A, Roulot D, Laouénan C, Bedossa P, Castera L, Pol S, Valla D, Quid-Nash consortium
Prospective external validation of a new non-invasive test for the diagnosis of non-alcoholic steatohepatitis in patients with type 2 diabetes.
Alimentary Pharmacology & Therapeutics 2021, 54, 952-966.

Abe E, Assoumou L, de Truchis P, Amat K, Gibowski S, Gras G, Bellet J, Saillard J, Katlama C, Costagliola D, Girard PM, Landman R, Alvarez JC
Pharmacological data of a successful 4-days-a-week regimen in HIV antiretroviral therapy (ANRS 162-4D trial).
British Journal of Clinical Pharmacology 2021, 87, 1930-1939.

Martino S, Arlet JB, Odièvre MH, Jullien V, Moras M, Hattab C, Lefebvre T, Gouya L, Ostuni MA, Lefevre SD, Le Van Kim C
Deficient mitophagy pathways in sickle cell disease.
British Journal of Haematology 2021, 193, 988-993.

Gault N, Esposito-Farese M, Revest M, Inamo J, Cabie A, Polard É, Hulot JS, Ghosn J, Chirouze C, Deconinck L, Diehl JL, Poissy J, Epaulard O, Lefèvre B, Piroth L, de Montmollin E, Oziol E, Etienne M, Laouenan C, Rossignol P, Costagliola D, Vidal-Petiot E, French-Covid cohort investigators and study group
Chronic use of Renin-Angiotensin-Aldosterone-System blockers and mortality in COVID-19: a multicenter prospective cohort and literature review.
Fundamental & Clinical Pharmacology 2021

Meudec L, Jelin G, Goossens J, Forien M, Jacquier H, Dieudé P, Ottaviani S
Whipple disease mimicking polymyalgia rheumatica with initial response to tocilizumab.
Internal Medicine Journal 2021, 51, 2151-2152.

Le Hingrat Q, Bouzid D, Choquet C, Laurent O, Lescure FX, Timsit JF, Houhou-Fidouh N, Casalino E, Lucet JC, Descamps D, Visseaux B
Viral epidemiology and SARS-CoV-2 co-infections with other respiratory viruses during the first COVID-19 wave in Paris, France.
Influenza and Other Respiratory Viruses 2021, 15, 425-428.

Gonçalves A, Lemenuel-Diot A, Cosson V, Jin Y, Feng S, Bo Q, Guedj J
What drives the dynamics of HBV RNA during treatment?.
Journal of Viral Hepatitis 2021, 28, 383-392.

Bauvin P, Delacôte C, Lassailly G, Ntandja Wandji LC, Gnemmi V, Dautrecque F, Louvet A, Caiazzo R, Raverdy V, Leteurtre E, Pattou F, Deuffic-Burban S, Mathurin P
A tool to predict progression of non-alcoholic fatty liver disease in severely obese patients.
Liver International: Official Journal of the International Association for the Study of the Liver 2021, 41, 91-100.

Vaittinada Ayar P, Casalino E, Curac S, Gay M
Easy-MCQ: An 8-minutes time-out in the emergency room to focus on Chemical, Biological, Radiological and Nuclear (CBRN) threat.
Medical Education 2021, 55, 1327-1328.

Pasquier G, Bounhiol A, Robert Gangneux F, Zahar JR, Gangneux JP, Novara A, Bougnoux ME, Dannaoui E
A review of significance of Aspergillus detection in airways of ICU COVID-19 patients.
Mycoses 2021, 64, 980-988.

Bastard P, Gervais A, Le Voyer T, Rosain J, Philippot Q, Manry J, Michailidis E, Hoffmann HH, Eto S, Garcia-Prat M, Bizien L, Parra-Martínez A, Yang R, Haljasmägi L, Migaud M, Särekannu K, Maslovskaja J, de Prost N, Tandjaoui-Lambiotte Y, Luyt CE, Amador-Borrero B, Gaudet A, Poissy J, Morel P, Richard P, Cognasse F, Troya J, Trouillet-Assant S, Belot A, Saker K, Garçon P, Rivière JG, Lagier JC, Gentile S, Rosen LB, Shaw E, Morio T, Tanaka J, Dalmau D, Tharaux PL, Sene D, Stepanian A, Megarbane B, Triantafyllia V, Fekkar A, Heath JR, Franco JL, Anaya JM, Solé-Violán J, Imberti L, Biondi A, Bonfanti P, Castagnoli R, Delmonte OM, Zhang Y, Snow AL, Holland SM, Biggs C, Moncada-Vélez M, Arias AA, Lorenzo L, Boucherit S, Coulibaly B, Anglicheau D, Planas AM, Haerynck F, Duvlis S, Nussbaum RL, Ozcelik T, Keles S, Bousfiha AA, El Bakkouri J, Ramirez-Santana C, Paul S, Pan-Hammarström Q, Hammarström L, Dupont A, Kurolap A, Metz CN, Aiuti A, Casari G, Lampasona V, Ciceri F, Barreiros LA, Dominguez-Garrido E, Vidigal M, Zatz M, van de Beek D, Sahanic S, Tancevski I, Stepanovskyy Y, Boyarchuk O, Nukui Y, Tsumura M, Vidaur L, Tangye SG, Burrel S, Duffy D, Quintana-Murci L, Klocperk A, Kann NY, Shcherbina A, Lau YL, Leung D, Coulongeat M, Marlet J, Koning R, Reyes LF, Chauvineau-Grenier A, Venet F, Monneret G, Nussenzweig MC, Arrestier R, Boudhabhay I, Baris-Feldman H, Hagin D, Wauters J, Meyts I, Dyer AH, Kennelly SP, Bourke NM, Halwani R, Sharif-Askari NS, Dorgham K, Sallette J, Sedkaoui SM, AlKhater S, Rigo-Bonnin R, Morandeira F, Roussel L, Vinh DC, Ostrowski SR, Condino-Neto A, Prando C, Bonradenko A, Spaan AN, Gilardin L, Fellay J, Lyonnet S, Bilguvar K, Lifton RP, Mane S, HGID Lab, COVID Clinicians, COVID-STORM Clinicians, NIAID Immune Response to COVID Group, NH-COVAIR Study Group, Danish CHGE, Danish Blood Donor Study, St. James's Hospital, SARS CoV2 Interest group, French COVID Cohort Study Group, Imagine COVID-Group, Milieu Intérieur Consortium, CoV-Contact Cohort, Amsterdam UMC Covid-19, Biobank Investigators, COVID Human Genetic Effort, CONSTANCES cohort, 3C-Dijon Study, Cerba Health-Care, Etablissement du Sang study group, Anderson MS, Boisson B, Béziat V, Zhang SY, Vandreakos E, Hermine O, Pujol A, Peterson P, Mogensen TH, Rowen L, Mond J, Debette S, de Lamballerie X, Duval X, Mentré F, Zins M, Soler-Palacin P, Colobran R, Gorochov G, Solanich X, Susen S, Martinez-Picado J, Raoult D, Vasse M, Gregersen PK, Piemonti L, Rodríguez-Gallego C, Notarangelo LD, Su HC, Kisand K, Okada S, Puel A, Jouanguy E, Rice CM, Tiberghien P, Zhang Q, Cobat A, Abel L, Casanova JL
Autoantibodies neutralizing type I IFNs are present in ~4% of uninfected individuals over 70 years old and account for ~20% of COVID-19 deaths.
Science Immunology 2021, 6, eabl4340.

Asano T, Boisson B, Onodi F, Matuozzo D, Moncada-Velez M, Maglorius Renkilaraj MRL, Zhang P, Meertens L, Bolze A, Materna M, Korniotis S, Gervais A, Talouarn E, Bigio B, Seeleuthner Y, Bilguvar K, Zhang Y, Neehus AL, Ogishi M, Pelham SJ, Le Voyer T, Rosain J, Philippot Q, Soler-Palacín P, Colobran R, Martin-Nalda A, Rivière JG, Tandjaoui-Lambiotte Y, Chaïbi K, Shahrooei M, Darazam IA, Olyaei NA, Mansouri D, Hatipoğlu N, Palabiyik F, Ozcelik T, Novelli G, Novelli A, Casari G, Aiuti A, Carrera P, Bondesan S, Barzaghi F, Rovere-Querini P, Tresoldi C, Franco JL, Rojas J, Reyes LF, Bustos IG, Arias AA, Morelle G, Christèle K, Troya J, Planas-Serra L, Schlüter A, Gut M, Pujol A, Allende LM, Rodriguez-Gallego C, Flores C, Cabrera-Marante O, Pleguezuelo DE, de Diego RP, Keles S, Aytekin G, Akcan OM, Bryceson YT, Bergman P, Brodin P, Smole D, Smith CIE, Norlin AC, Campbell TM, Covill LE, Hammarström L, Pan-Hammarström Q, Abolhassani H, Mane S, Marr N, Ata M, Al Ali F, Khan T, Spaan AN, Dalgard CL, Bonfanti P, Biondi A, Tubiana S, Burdet C, Nussbaum R, Kahn-Kirby A, Snow AL, COVID Human Genetic Effort, COVID-STORM Clinicians, COVID Clinicians, Imagine COVID Group, French COVID Cohort Study Group, CoV-Contact Cohort, Amsterdam UMC Covid-, Biobank, NIAID-USUHS COVID Study Group, Bustamante J, Puel A, Boisson-Dupuis S, Zhang SY, Béziat V, Lifton RP, Bastard P, Notarangelo LD, Abel L, Su HC, Jouanguy E, Amara A, Soumelis V, Cobat A, Zhang Q, Casanova JL
X-linked recessive TLR7 deficiency in ~1% of men under 60 years old with life-threatening COVID-19.
Science Immunology 2021, 6, eabl4348.

Massot M, Châtre P, Condamine B, Métayer V, Clermont O, Madec JY, Denamur E, Haenni M
Interplay between Bacterial Clones and Plasmids in the Spread of Antibiotic Resistance Genes in the Gut: Lessons from a Temporal Study in Veal Calves.
Applied and Environmental Microbiology 2021, 87, e0135821.

Ghelfenstein-Ferreira T, Beaumont AL, Dellière S, Peiffer-Smadja N, Pineros N, Carbonnelle E, Greub G, Abbara S, Luong Nguyen LB, Lescat M
An Educational Game Evening for Medical Residents: A Proof of Concept to Evaluate the Impact on Learning of the Use of Games.
Journal of Microbiology & Biology Education 2021, 22, e00119-21.

Bonnet R, Beyrouthy R, Haenni M, Nicolas-Chanoine MH, Dalmasso G, Madec JY
Host Colonization as a Major Evolutionary Force Favoring the Diversity and the Emergence of the Worldwide Multidrug-Resistant Escherichia coli ST131.
mBio 2021, 12, e0145121.

Ben Khedher M, Nindo F, Chevalier A, Bonacorsi S, Dubourg G, Fenollar F, Casagrande F, Lotte R, Boyer L, Gallet A, Rolain JM, Croce O, Ruimy R
Complete Circular Genome Sequences of Three Bacillus cereus Group Strains Isolated from Positive Blood Cultures from Preterm and Immunocompromised Infants Hospitalized in France.
Microbiology Resource Announcements 2021, 10, e0059721.

Bridier-Nahmias A, Launay A, Bleibtreu A, Magnan M, Walewski V, Chatel J, Dion S, Robbe-Saule V, Clermont O, Norel F, Denamur E, Tenaillon O
Escherichia coli Genomic Diversity within Extraintestinal Acute Infections Argues for Adaptive Evolution at Play.
mSphere 2021, 6, e01176-20.

Mageau A, Aldebert G, Van Gysel D, Papo T, Timsit JF, Sacre K
SARS-CoV-2 infection among inpatients with systemic lupus erythematosus in France: a nationwide epidemiological study.
Annals of the Rheumatic Diseases 2021

Bizot E, Cointe A, Béchet S, Sobral E, Cohen R, Mariani-Kurkdjian P, Levy C, Bonacorsi S
Shiga toxin-producing Escherichia coli carriage in 959 healthy French infants.
Archives of Disease in Childhood 2021, 106, 1239-1240.

Reignier J, Le Gouge A, Lascarrou JB, Annane D, Argaud L, Hourmant Y, Asfar P, Badie J, Nay MA, Botoc NV, Brisard L, Bui HN, Chatellier D, Chauvelot L, Combes A, Cracco C, Darmon M, Das V, Debarre M, Delbove A, Devaquet J, Voicu S, Aissaoui-Balanant N, Dumont LM, Oziel J, Gontier O, Groyer S, Guidet B, Jaber S, Lambiotte F, Leroy C, Letocart P, Madeux B, Maizel J, Martinet O, Martino F, Mercier E, Mira JP, Nseir S, Picard W, Piton G, Plantefeve G, Quenot JP, Renault A, Guérin L, Richecoeur J, Rigaud JP, Schneider F, Silva D, Sirodot M, Souweine B, Reizine F, Tamion F, Terzi N, Thévenin D, Thiéry G, Thieulot-Rolin N, Timsit JF, Tinturier F, Tirot P, Vanderlinden T, Vinatier I, Vinsonneau C, Maugars D, Giraudeau B
Impact of early low-calorie low-protein versus standard-calorie standard-protein feeding on outcomes of ventilated adults with shock: design and conduct of a randomised, controlled, multicentre, open-label, parallel-group trial (NUTRIREA-3).
BMJ open 2021, 11, e045041.

Papot E, Kalampalikis N, Doumergue M, Pilorgé F, Quatremère G, Yazdanpanah Y, Préau M, ANRS-GOTA study group
Can we talk about price with patients when choosing antiretroviral therapy? A survey with people living with HIV and prescribers in France.
BMJ open 2021, 11, e046212.

Voiriot G, Fartoukh M, Durand-Zaleski I, Berard L, Rousseau A, Armand-Lefevre L, Verdet C, Argaud L, Klouche K, Megarbane B, Patrier J, Richard JC, Reignier J, Schwebel C, Souweine B, Tandjaoui-Lambiotte Y, Simon T, Timsit JF, MULTI-CAP study group
Combined use of a broad-panel respiratory multiplex PCR and procalcitonin to reduce duration of antibiotics exposure in patients with severe community-acquired pneumonia (MULTI-CAP): a multicentre, parallel-group, open-label, individual randomised trial conducted in French intensive care units.
BMJ open 2021, 11, e048187.

Tavernier E, Barbier F, Meziani F, Quenot JP, Herbrecht JE, Landais M, Roux D, Seguin P, Schnell D, Veinstein A, Veber B, Lasocki S, Lu Q, Beduneau G, Ferrandiere M, Dahyot-Fizelier C, Plantefeve G, Nay MA, Merdji H, Andreu P, Vecellio L, Muller G, Cabrera M, Le Pennec D, Respaud R, Lanotte P, Gregoire N, Leclerc M, Helms J, Boulain T, Lacherade JC, Ehrmann S, REVA network and the CRICS-TRIGGESEP F-CRIN network
Inhaled amikacin versus placebo to prevent ventilator-associated pneumonia: the AMIKINHAL double-blind multicentre randomised controlled trial protocol.
BMJ open 2021, 11, e048591.

Mora M, Rincon G, Bourrelly M, Maradan G, Freire Maresca A, Michard F, Rouveix E, Pannetier J, Leriche D, Alain T, Yazdanpanah Y, Michels D, Spire B
Living conditions, HIV and gender affirmation care pathways of transgender people living with HIV in France: a nationwide, comprehensive, cross-sectional, community-based research protocol (ANRS Trans&HIV).
BMJ open 2021, 11, e052691.

Mahamat-Saleh Y, Fiolet T, Rebeaud ME, Mulot M, Guihur A, El Fatouhi D, Laouali N, Peiffer-Smadja N, Aune D, Severi G
Diabetes, hypertension, body mass index, smoking and COVID-19-related mortality: a systematic review and meta-analysis of observational studies.
BMJ open 2021, 11, e052777.

Sigaut S, Couffignal C, Esposito-Farèse M, Degos V, Molliex S, Boddaert J, Raynaud-Simon A, Durand-Zaleski I, Marcault E, Jacota M, Dahmani S, Paugam-Burtz C, Weiss E
Melatonin for prevention of postoperative delirium after lower limb fracture surgery in elderly patients (DELIRLESS): study protocol for a multicentre randomised controlled trial.
BMJ open 2021, 11, e053908.

Rose K, Bressan S, Honeyford K, Bognar Z, Buonsenso D, Da Dalt L, De T, Farrugia R, Parri N, Oostenbrink R, Maconochie I, Moll HA, Roland D, Titomanlio L, Nijman R, in association with the REPEM network (Research in European Paediatric Emergency Medicine) as part of the EPISODES Study, in association with the REPEM network(Research in European Paediatric Emergency Medicine) as part of the EPISODES Study
Responses of paediatric emergency departments to the first wave of the COVID-19 pandemic in Europe: a cross-sectional survey study.
BMJ paediatrics open 2021, 5, e001269.

Isernia V, Phung B, Lepretre AM, Azadi B, Rincon G, Zelie J, Le Gac S, Deprez A, Michard F, Yazdanpanah Y, Ghosn J
Pre-exposure HIV prophylaxis (PrEP) among transgender women: 3 years of follow-up in a university hospital in Paris.
Sexually Transmitted Infections 2021, 97, 465-466.

Ghanem M, Homps-Legrand M, Garnier M, Morer L, Goletto T, Frija-Masson J, Wicky PH, Jaquet P, Bancal C, Hurtado-Nedelec M, de Chaisemartin L, Jaillet M, Mailleux A, Quesnel C, Poté N, Debray MP, de Montmollin E, Neukirch C, Borie R, Taillé C, Crestani B, French COVID Cohort Study Group
Blood fibrocytes are associated with severity and prognosis in COVID-19 pneumonia.
American Journal of Physiology. Lung Cellular and Molecular Physiology 2021, 321, L847-L858.

Weizman O, Sharifzadehgan A, Bougouin W, Narayanan K, Tence N, Dumas F, Waldmann V, Lamhaut L, Jost D, Wahbi K, Varenne O, Garcia R, Karam N, Cariou A, Jouven X, Marijon E, Paris-SDEC Investigators†
Sudden Cardiac Arrest in Young Women.
Circulation 2021, 143, 758-760.

Buetti N, Mimoz O, Schwebel C, Ruckly S, Castry M, Dupuis C, Souweine B, Lucet JC, Timsit JF
Insertion Site and Infection Risk among Peripheral Arterial Catheters.
American Journal of Respiratory and Critical Care Medicine 2021, 203, 630-633.

Dumas G, Lemiale V, Rathi N, Cortegiani A, Pène F, Bonny V, Salluh J, Albaiceta GM, Soares M, Soubani AO, Canet E, Hanane T, Kouatchet A, Mokart D, Lebiedz P, Türkoğlu M, Coudroy R, Jeon K, Demoule A, Mehta S, Caruso P, Frat JP, Yang KY, Roca O, Laffey J, Timsit JF, Azoulay E, Darmon M
Survival in Immunocompromised Patients Ultimately Requiring Invasive Mechanical Ventilation: A Pooled Individual Patient Data Analysis.
American Journal of Respiratory and Critical Care Medicine 2021, 204, 187-196.

Tandjaoui-Lambiotte Y, Timsit JF, Alloui C, Zahar JR, Vanoli E
Viral Dispersion in the Intensive Care Unit: The Wind Effect.
American Journal of Respiratory and Critical Care Medicine 2021

Marin J, Brichler S, Lecuyer H, Carbonnelle E, Lescat M
Feedback From Medical and Biology Students on Distance Learning: Focus on a Useful Interactive Software, Wooclap®.
Journal of Educational Technology Systems 2021, 50, 188-200.

Baud FJ, Jullien V, Abarou T, Pilmis B, Raphalen JH, Houzé P, Carli P, Lamhaut L
Elimination of fluconazole during continuous renal replacement therapy. An in vitro assessment.
The International Journal of Artificial Organs 2021, 44, 453-464.

Fouéré S, Cazanave C, Hélary M, Dupin N, Tattevin P, Bébéar C, Beylot-Barry M, Molina JM, Chosidow O, Riche A, Berçot B
Update on French recommendations for the treatment of uncomplicated Neisseria gonorrhoeae infections.
International journal of STD & AIDS 2021, 32, 1081-1083.

Veziris N, Bonnet I, Morel F, Guglielmetti L, Maitre T, Fournier Le Ray L, Sougakoff W, Robert J, Aubry A, CNR MyRMA, Members of the CNR-MyRMA (French National Reference Center for Mycobacteria
Impact of the revised definition of extensively drug-resistant tuberculosis.
The European Respiratory Journal 2021, 58, 2100641.

Gillet Y, Tristan A, Rasigade JP, Saadatian-Elahi M, Bouchiat C, Bes M, Dumitrescu O, Leloire M, Dupieux C, Laurent F, Lina G, Etienne J, Vanhems P, Argaud L, Vandenesch F, PVL pneumonia study group
Prognostic factors of severe community-acquired staphylococcal pneumonia in France.
The European Respiratory Journal 2021, 58, 2004445.

Manchon P, Belhadi D, Mentré F, Laouénan C
Evaluation by simulation of clinical trial designs for evaluation of treatment during a viral haemorrhagic fever outbreak.
BMC medical research methodology 2021, 21, 98.

Besançon L, Peiffer-Smadja N, Segalas C, Jiang H, Masuzzo P, Smout C, Billy E, Deforet M, Leyrat C
Open science saves lives: lessons from the COVID-19 pandemic.
BMC medical research methodology 2021, 21, 117.

von Cube M, Timsit JF, Kammerlander A, Schumacher M
Quantifying and communicating the burden of COVID-19.
BMC medical research methodology 2021, 21, 164.

Marih L, Sawras V, Pavie J, Sodqi M, Malmoussi M, Tassi N, Bensghir R, Nani S, Lahsen AO, Laureillard D, El Filali KM, Champenois K, Weiss L
Missed opportunities for HIV testing in patients newly diagnosed with HIV in Morocco.
BMC infectious diseases 2021, 21, 48.

Jacobsson S, Cole MJ, Spiteri G, Day M, Unemo M, Euro-GASP Network
Associations between antimicrobial susceptibility/resistance of Neisseria gonorrhoeae isolates in European Union/European Economic Area and patients' gender, sexual orientation and anatomical site of infection, 2009-2016.
BMC infectious diseases 2021, 21, 273.

Gras J, Abdel-Nabey M, Dupont A, Le Goff J, Molina JM, Peraldi MN
Clinical characteristics, risk factors and outcome of severe Norovirus infection in kidney transplant patients: a case-control study.
BMC infectious diseases 2021, 21, 351.

Rahi M, Le Pluart D, Beaudet A, Ismaël S, Parisey M, Poey N, Tarhini H, Lescure FX, Yazdanpanah Y, Deconinck L
Sociodemographic characteristics and transmission risk factors in patients hospitalized for COVID-19 before and during the lockdown in France.
BMC infectious diseases 2021, 21, 812.

Tchankoni MK, Bitty-Anderson AM, Sadio AJ, Gbeasor-Komlanvi FA, Ferré VM, Zida-Compaore WIC, Dorkenoo AM, Saka B, Dagnra AC, Charpentier C, Ekouevi DK
Prevalence and factors associated with trichomonas vaginalis infection among female sex workers in Togo, 2017.
BMC infectious diseases 2021, 21, 775.

Blanc E, Chaize G, Fievez S, Féger C, Herquelot E, Vainchtock A, Timsit JF, Gaillat J
The impact of comorbidities and their stacking on short- and long-term prognosis of patients over 50 with community-acquired pneumonia.
BMC infectious diseases 2021, 21, 949.

Lorthe E, Kayem G, TOCOPROM Study Group and the GROG (Groupe de Recherche en Obstétrique et Gynécologie)
Tocolysis in the management of preterm prelabor rupture of membranes at 22-33 weeks of gestation: study protocol for a multicenter, double-blind, randomized controlled trial comparing nifedipine with placebo (TOCOPROM).
BMC pregnancy and childbirth 2021, 21, 614.

Gheerbrant H, Timsit JF, Terzi N, Ruckly S, Laramas M, Levra MG, Jacquet E, Falque L, Moro-Sibilot D, Toffart AC
Factors associated with survival of patients with solid Cancer alive after intensive care unit discharge between 2005 and 2013.
BMC cancer 2021, 21, 9.

Hellmann R, Feral-Pierssens AL, Michault A, Casalino E, Ricard-Hibon A, Adnet F, Brun-Ney D, Bouzid D, Menu A, Wargon M
The analysis of the geographical distribution of emergency departments' frequent users: a tool to prioritize public health policies?.
BMC public health 2021, 21, 1689.

Bemer P, Peuchant O, Guet-Revillet H, Bador J, Balavoine C, Basille D, Beltramo G, Blanc FX, Blanchard E, Boulanger S, Bourgoin A, Boutoille D, Cambau E, Canis F, Caparros D, Carricajo A, Carrière C, Couetdic G, Couturaud F, Dalphin JC, Degot T, Desquiens M, Devouassoux G, Duez JM, Dumitrescu O, Dupuy-Grasset M, Gaudart A, Georges M, Godet C, Godreuil S, Guillouzouic A, Hamdad-Daoudi F, Héry-Arnaud G, Koebel C, Lagrange A, Lanotte P, Marchand-Adam S, Mougari F, Murris M, Patry I, Pérouse de Montclos M, Raskine L, Risso K, Segonds C, Sicard D, Terru D, Vachée A, Vergnon JM, Martin C, Schramm F, Andrejak C
Management of patients with pulmonary mycobacteriosis in France: a multicenter retrospective cohort study.
BMC pulmonary medicine 2021, 21, 333.

Gaubert S, Blet A, Dib F, Ceccaldi PF, Brock T, Calixte M, De Macédo L, Dujardin T, Jean-Louis L, Leghima D, Mouyal S, Tordjman DD, Plaisance P, Roos C, Remini SA, Roux D, Paquet C
Positive effects of lumbar puncture simulation training for medical students in clinical practice.
BMC medical education 2021, 21, 18.

Le Roux E, Mari Muro M, Mognon K, Saïd M, Caillavet V, Matheron S, Ledoux S, Decq P, Vorspan F, Le Strat Y, Delaugerre C, Le Bras M, Alberti C, Ruszniewski P, Zerr P, Faye A
A governmental program to encourage medical students to deliver primary prevention: experiment and evaluation in a French faculty of medicine.
BMC medical education 2021, 21, 47.

Passemard S, Faye A, Dubertret C, Peyre H, Vorms C, Boimare V, Auvin S, Flamant M, Ruszniewski P, Ricard JD
Covid-19 crisis impact on the next generation of physicians: a survey of 800 medical students.
BMC medical education 2021, 21, 529.

Pham T, Beloncle F, Piquilloud L, Ehrmann S, Roux D, Dessap AM, Carteaux G
Assessment of a massive open online course (MOOC) incorporating interactive simulation videos on residents' knowledge retention regarding mechanical ventilation.
BMC medical education 2021, 21, 595.

Ridde V, Gautier L, Dagenais C, Chabrol F, Hou R, Bonnet E, David PM, Cloos P, Duhoux A, Lucet JC, Traverson L, de Araujo Oliveira SR, Cazarin G, Peiffer-Smadja N, Touré L, Coulibaly A, Honda A, Noda S, Tamura T, Baba H, Kodoi H, Zinszer K
Learning from public health and hospital resilience to the SARS-CoV-2 pandemic: protocol for a multiple case study (Brazil, Canada, China, France, Japan, and Mali).
Health Research Policy and Systems 2021, 19, 76.

Dupuis C, Sabra A, Patrier J, Chaize G, Saighi A, Féger C, Vainchtock A, Gaillat J, Timsit JF
Burden of pneumococcal pneumonia requiring ICU admission in France: 1-year prognosis, resources use, and costs.
Critical Care (London, England) 2021, 25, 24.

Madotto F, McNicholas B, Rezoagli E, Pham T, Laffey JG, Bellani G, LUNG SAFE Investigators, ESICM Trials Group
Death in hospital following ICU discharge: insights from the LUNG SAFE study.
Critical Care (London, England) 2021, 25, 144.

Buetti N, Ruckly S, Lucet JC, Mimoz O, Souweine B, Timsit JF
Factors influencing local signs at catheter insertion site regardless of catheter-related bloodstream infections.
Critical Care (London, England) 2021, 25, 71.

Wicky PH, Niedermann MS, Timsit JF
Ventilator-associated pneumonia in the era of COVID-19 pandemic: How common and what is the impact?.
Critical Care (London, England) 2021, 25, 153.

Madhi F, Ouldali N, Levy C, Taha MK, Cohen R, French Pediatric Meningitis Network
Factors associated with death in children with purpura fulminans: a French national prospective cohort study.
Critical Care (London, England) 2021, 25, 181.

Thille AW, Monseau G, Coudroy R, Nay MA, Gacouin A, Decavèle M, Sonneville R, Beloncle F, Girault C, Dangers L, Lautrette A, Levrat Q, Rouzé A, Vivier E, Lascarrou JB, Ricard JD, Razazi K, Barberet G, Lebert C, Ehrmann S, Massri A, Bourenne J, Pradel G, Bailly P, Terzi N, Dellamonica J, Lacave G, Robert R, Ragot S, Frat JP, HIGH-WEAN Study Group and the REVA research network
Non-invasive ventilation versus high-flow nasal oxygen for postextubation respiratory failure in ICU: a post-hoc analysis of a randomized clinical trial.
Critical Care (London, England) 2021, 25, 221.

Timsit JF, Huntington JA, Wunderink RG, Shime N, Kollef MH, Kivistik Ü, Nováček M, Réa-Neto Á, Martin-Loeches I, Yu B, Jensen EH, Butterton JR, Wolf DJ, Rhee EG, Bruno CJ
Ceftolozane/tazobactam versus meropenem in patients with ventilated hospital-acquired bacterial pneumonia: subset analysis of the ASPECT-NP randomized, controlled phase 3 trial.
Critical Care (London, England) 2021, 25, 290.

Niederman MS, Baron RM, Bouadma L, Calandra T, Daneman N, DeWaele J, Kollef MH, Lipman J, Nair GB
Initial antimicrobial management of sepsis.
Critical Care (London, England) 2021, 25, 307.

COVID-ICU group, for the REVA network, COVID-ICU investigators
Benefits and risks of noninvasive oxygenation strategy in COVID-19: a multicenter, prospective cohort study (COVID-ICU) in 137 hospitals.
Critical Care (London, England) 2021, 25, 421.

Kollef MH, Shorr AF, Bassetti M, Timsit JF, Micek ST, Michelson AP, Garnacho-Montero J
Timing of antibiotic therapy in the ICU.
Critical Care (London, England) 2021, 25, 360.

Contou D, de Prost N, HOPEFUL Study group
Clinical phenotype and outcomes of pneumococcal versus meningococcal purpura fulminans: a multicenter retrospective cohort study.
Critical Care (London, England) 2021, 25, 386.

Meyer A, Buetti N, Houhou-Fidouh N, Patrier J, Abdel-Nabey M, Jaquet P, Presente S, Girard T, Sayagh F, Ruckly S, Wicky PH, de Montmollin E, Bouadma L, Sonneville R, Descamps D, Timsit JF
HSV-1 reactivation is associated with an increased risk of mortality and pneumonia in critically ill COVID-19 patients.
Critical Care (London, England) 2021, 25, 417.

Badio M, Lhomme E, Kieh M, Beavogui AH, Kennedy SB, Doumbia S, Leigh B, Sow SO, Diallo A, Fusco D, Kirchoff M, Termote M, Vatrinet R, Wentworth D, Esperou H, Lane HC, Pierson J, Watson-Jones D, Roy C, D'Ortenzio E, Greenwood B, Chêne G, Richert L, Neaton JD, Yazdanpanah Y, PREVAC study team
Partnership for Research on Ebola VACcination (PREVAC): protocol of a randomized, double-blind, placebo-controlled phase 2 clinical trial evaluating three vaccine strategies against Ebola in healthy volunteers in four West African countries.
Trials 2021, 22, 86.

Gagneux-Brunon A, Schilte C, Garcin A, Jolly N, Vray M, Schaeffer L, Duval X, Hoen B, Botelho-Nevers E
Acceptability of a COVID-19 pre-exposure prophylaxis trial with hydroxychloroquine in French healthcare workers during the first wave of COVID-19 pandemic.
Trials 2021, 22, 373.

Royer G, Darty MM, Clermont O, Condamine B, Laouenan C, Decousser JW, Vallenet D, Lefort A, de Lastours V, Denamur E, COLIBAFI and SEPTICOLI groups
Phylogroup stability contrasts with high within sequence type complex dynamics of Escherichia coli bloodstream infection isolates over a 12-year period.
Genome Medicine 2021, 13, 77.

Morel-Journel T, Assié S, Vergu E, Mercier JB, Bonnet-Beaugrand F, Ezanno P
Minimizing the number of origins in batches of weaned calves to reduce their risks of developing bovine respiratory diseases.
Veterinary Research 2021, 52, 5.

Lemiale V, Dumas G, Demoule A, Pène F, Kouatchet A, Bisbal M, Nseir S, Argaud L, Kontar L, Klouche K, Barbier F, Seguin A, Louis G, Constantin JM, Mayaux J, Wallet F, Peigne V, Girault C, Oziel J, Nyunga M, Terzi N, Bouadma L, Lautrette A, Bige N, Raphalen JH, Papazian L, Bruneel F, Lebert C, Benoit D, Meert AP, Jaber S, Mokart D, Darmon M, Azoulay E, Groupe de Recherche en Reanimation Respiratoire du patient d’Onco-Hématologie (GRRR-OH)
Performance of the ROX index to predict intubation in immunocompromised patients receiving high-flow nasal cannula for acute respiratory failure.
Annals of Intensive Care 2021, 11, 17.

Thille AW, Coudroy R, Nay MA, Gacouin A, Decavèle M, Sonneville R, Beloncle F, Girault C, Dangers L, Lautrette A, Levrat Q, Rouzé A, Vivier E, Lascarrou JB, Ricard JD, Razazi K, Barberet G, Lebert C, Ehrmann S, Massri A, Bourenne J, Pradel G, Bailly P, Terzi N, Dellamonica J, Lacave G, Robert R, Ragot S, Frat JP, HIGH-WEAN Study Group, for the REVA Research Network
Non-invasive ventilation alternating with high-flow nasal oxygen versus high-flow nasal oxygen alone after extubation in COPD patients: a post hoc analysis of a randomized controlled trial.
Annals of Intensive Care 2021, 11, 30.

Bonnet N, Martin O, Boubaya M, Levy V, Ebstein N, Karoubi P, Tandjaoui-Lambiotte Y, Van Der Meersch G, Oziel J, Soulie M, Ghalayini M, Winchenne A, Zahar JR, Ahmed P, Gaudry S, Cohen Y
High flow nasal oxygen therapy to avoid invasive mechanical ventilation in SARS-CoV-2 pneumonia: a retrospective study.
Annals of Intensive Care 2021, 11, 37.

Benichou N, Lebbah S, Hajage D, Martin-Lefèvre L, Pons B, Boulet E, Boyer A, Chevrel G, Lerolle N, Carpentier D, de Prost N, Lautrette A, Bretagnol A, Mayaux J, Nseir S, Megarbane B, Thirion M, Forel JM, Maizel J, Yonis H, Markowicz P, Thiery G, Schortgen F, Tubach F, Ricard JD, Dreyfuss D, Gaudry S
Vascular access for renal replacement therapy among 459 critically ill patients: a pragmatic analysis of the randomized AKIKI trial.
Annals of Intensive Care 2021, 11, 56.

Touchard C, Cartailler J, Vellieux G, de Montmollin E, Jaquet P, Wanono R, Reuter J, Para M, Bouadma L, Timsit JF, d'Ortho MP, Kubis N, Rouvel Tallec A, Sonneville R, DINAMO Study Group
Simplified frontal EEG in adults under veno-arterial extracorporeal membrane oxygenation.
Annals of Intensive Care 2021, 11, 76.

Dres M, Hajage D, Lebbah S, Kimmoun A, Pham T, Béduneau G, Combes A, Mercat A, Guidet B, Demoule A, Schmidt M, COVID-ICU investigators
Characteristics, management, and prognosis of elderly patients with COVID-19 admitted in the ICU during the first wave: insights from the COVID-ICU study : Prognosis of COVID-19 elderly critically ill patients in the ICU.
Annals of Intensive Care 2021, 11, 77.

Manquat E, Le Dorze M, Pean De Ponflly G, Benmansour H, Amarsy R, Cambau E, Soyer B, Chousterman BG, Jacquier H
Correction to: Impact of systematic screening for AmpC-hyperproducing Enterobacterales intestinal carriage in intensive care unit patients.
Annals of Intensive Care 2021, 11, 84.

Fartoukh M, Voiriot G, Guérin L, Ricard JD, Combes A, Faure M, Benghanem S, de Montmollin E, Tandjaoui-Lambiotte Y, Vieillard-Baron A, Maury E, Diehl JL, Razazi K, Lemiale V, Trouiller P, Planquette B, Savale L, Heming N, Marey J, AP-HP Clinical Data Warehouse, Carrat F, Lapidus N, EPIcuFLU_APHP Group
Seasonal burden of severe influenza virus infection in the critically ill patients, using the Assistance Publique-Hôpitaux de Paris clinical data warehouse: a pilot study.
Annals of Intensive Care 2021, 11, 117.

Rodriguez M, Ragot S, Coudroy R, Quenot JP, Vignon P, Forel JM, Demoule A, Mira JP, Ricard JD, Nseir S, Colin G, Pons B, Danin PE, Devaquet J, Prat G, Merdji H, Petitpas F, Vivier E, Mekontso-Dessap A, Nay MA, Asfar P, Dellamonica J, Argaud L, Ehrmann S, Fartoukh M, Girault C, Robert R, Thille AW, Frat JP, REVA Network
Noninvasive ventilation vs. high-flow nasal cannula oxygen for preoxygenation before intubation in patients with obesity: a post hoc analysis of a randomized controlled trial.
Annals of Intensive Care 2021, 11, 114.

Yatim N, Boussier J, Chocron R, Hadjadj J, Philippe A, Gendron N, Barnabei L, Charbit B, Szwebel TA, Carlier N, Pène F, Azoulay C, Khider L, Mirault T, Diehl JL, Guerin CL, Rieux-Laucat F, Duffy D, Kernéis S, Smadja DM, Terrier B
Platelet activation in critically ill COVID-19 patients.
Annals of Intensive Care 2021, 11, 113.

Jung B, Le Bihan C, Portales P, Bourgeois N, Vincent T, Lachaud L, Chanques G, Conseil M, Corne P, Massanet P, Timsit JF, Jaber S
Monocyte human leukocyte antigen-DR but not β-D-glucan may help early diagnosing invasive Candida infection in critically ill patients.
Annals of Intensive Care 2021, 11, 129.

Cottereau G, Messika J, Megarbane B, Guérin L, da Silva D, Bornstain C, Santos M, Ricard JD, Sztrymf B
Handgrip strength to predict extubation outcome: a prospective multicenter trial.
Annals of Intensive Care 2021, 11, 144.

Sanchez MA, Vuagnat A, Grimaud O, Leray E, Philippe JM, Lescure FX, Boutonnet M, Coignard H, Hibon AR, Sanchez S, Pottecher J
Impact of ICU transfers on the mortality rate of patients with COVID-19: insights from comprehensive national database in France.
Annals of Intensive Care 2021, 11, 151.

Buetti N, Ruckly S, Lucet JC, Mageau A, Dupuis C, Souweine B, Mimoz O, Timsit JF
Practices and intravascular catheter infection during on- and off-hours in critically ill patients.
Annals of Intensive Care 2021, 11, 153.

Chelly J, Plantefève G, Kamel T, Bruel C, Nseir S, Lai C, Cirillo G, Skripkina E, Ehrminger S, Berdaguer-Ferrari FD, Le Marec J, Paul M, Autret A, Deye N, ACICOVID-19 study group
Incidence, clinical characteristics, and outcome after unexpected cardiac arrest among critically ill adults with COVID-19: insight from the multicenter prospective ACICOVID-19 registry.
Annals of Intensive Care 2021, 11, 155.

Gibelin A, Dumas G, Valade S, de Chambrun MP, Bagate F, Neuville M, Schneider F, Baboi L, Groh M, Raphalen JH, Chiche JD, De Prost N, Luyt CE, Guérin C, Maury E, de Montmollin E, Hertig A, Parrot A, Clere-Jehl R, Fartoukh M
Causes of acute respiratory failure in patients with small-vessel vasculitis admitted to intensive care units: a multicenter retrospective study.
Annals of Intensive Care 2021, 11, 158.

Schmidt M, Guidet B, Demoule A, Ponnaiah M, Fartoukh M, Puybasset L, Combes A, Hajage D, COVID-ICU Investigators
Predicting 90-day survival of patients with COVID-19: Survival of Severely Ill COVID (SOSIC) scores.
Annals of Intensive Care 2021, 11, 170.

Massart N, Maxime V, Fillatre P, Razazi K, Ferré A, Moine P, Legay F, Voiriot G, Amara M, Santi F, Nseir S, Marque-Juillet S, Bounab R, Barbarot N, Bruneel F, Luyt CE, COVID ICU Bacteremia Study Group on behalf of the COVID-ICU Investigators
Characteristics and prognosis of bloodstream infection in patients with COVID-19 admitted in the ICU: an ancillary study of the COVID-ICU study.
Annals of Intensive Care 2021, 11, 183.

Diab-El Schahawi M, Zingg W, Vos M, Humphreys H, Lopez-Cerero L, Fueszl A, Zahar JR, Presterl E, ESCMID Study Group on Nosocomial Infections “The decontamination research working group”
Ultraviolet disinfection robots to improve hospital cleaning: Real promise or just a gimmick?.
Antimicrobial Resistance and Infection Control 2021, 10, 33.

Andolfo A, Maatoug R, Peiffer-Smadja N, Fayolle C, Blanckaert K
Emergency ward ultrasound: clinical audit on disinfection practices during routine and sterile examinations.
Antimicrobial Resistance and Infection Control 2021, 10, 25.

Deschanvres C, Haudebourg T, Peiffer-Smadja N, Blanckaert K, Boutoille D, Lucet JC, Birgand G
How do the general population behave with facemasks to prevent COVID-19 in the community? A multi-site observational study.
Antimicrobial Resistance and Infection Control 2021, 10, 61.

Reeves S, Bertrand J, Uchida H, Yoshida K, Otani Y, Ozer M, Liu KY, Bramon E, Bies R, Pollock BG, Howard R
Towards safer risperidone prescribing in Alzheimer's disease.
The British Journal of Psychiatry: The Journal of Mental Science 2021, 218, 268-275.

Comets E, Mentré F
Developing Tools to Evaluate Non-linear Mixed Effect Models: 20 Years on the npde Adventure.
The AAPS journal 2021, 23, 75.

Menardo F, Rutaihwa LK, Zwyer M, Borrell S, Comas I, Conceição EC, Coscolla M, Cox H, Joloba M, Dou HY, Feldmann J, Fenner L, Fyfe J, Gao Q, García de Viedma D, Garcia-Basteiro AL, Gygli SM, Hella J, Hiza H, Jugheli L, Kamwela L, Kato-Maeda M, Liu Q, Ley SD, Loiseau C, Mahasirimongkol S, Malla B, Palittapongarnpim P, Rakotosamimanana N, Rasolofo V, Reinhard M, Reither K, Sasamalo M, Silva Duarte R, Sola C, Suffys P, Batista Lima KV, Yeboah-Manu D, Beisel C, Brites D, Gagneux S
Local adaptation in populations of Mycobacterium tuberculosis endemic to the Indian Ocean Rim..
F1000Research 2021, 10, 60.

Petrillo M, Fabbri M, Kagkli DM, Querci M, Van den Eede G, Alm E, Aytan-Aktug D, Capella-Gutierrez S, Carrillo C, Cestaro A, Chan KG, Coque T, Endrullat C, Gut I, Hammer P, Kay GL, Madec JY, Mather AE, McHardy AC, Naas T, Paracchini V, Peter S, Pightling A, Raffael B, Rossen J, Ruppé E, Schlaberg R, Vanneste K, Weber LM, Westh H, Angers-Loustau A
A roadmap for the generation of benchmarking resources for antimicrobial resistance detection using next generation sequencing..
F1000Research 2021, 10, 80.

Guyeux C, Sola C, Noûs C, Refrégier G
CRISPRbuilder-TB: "CRISPR-builder for tuberculosis". Exhaustive reconstruction of the CRISPR locus in mycobacterium tuberculosis complex using SRA.
PLoS computational biology 2021, 17, e1008500.

Lingas G, Rosenke K, Safronetz D, Guedj J
Lassa viral dynamics in non-human primates treated with favipiravir or ribavirin.
PLoS computational biology 2021, 17, e1008535.

Best K, Barouch DH, Guedj J, Ribeiro RM, Perelson AS
Zika virus dynamics: Effects of inoculum dose, the innate immune response and viral interference.
PLoS computational biology 2021, 17, e1008564.

Czuppon P, Débarre F, Gonçalves A, Tenaillon O, Perelson AS, Guedj J, Blanquart F
Success of prophylactic antiviral therapy for SARS-CoV-2: Predicted critical efficacies and impact of different drug-specific mechanisms of action.
PLoS computational biology 2021, 17, e1008752.

Gonçalves A, Maisonnasse P, Donati F, Albert M, Behillil S, Contreras V, Naninck T, Marlin R, Solas C, Pizzorno A, Lemaitre J, Kahlaoui N, Terrier O, Ho Tsong Fang R, Enouf V, Dereuddre-Bosquet N, Brisebarre A, Touret F, Chapon C, Hoen B, Lina B, Rosa Calatrava M, de Lamballerie X, Mentré F, Le Grand R, van der Werf S, Guedj J
SARS-CoV-2 viral dynamics in non-human primates.
PLoS computational biology 2021, 17, e1008785.

Epelboin S, Labrosse J, De Mouzon J, Fauque P, Gervoise-Boyer MJ, Levy R, Sermondade N, Hesters L, Bergère M, Devienne C, Jonveaux P, Ghosn J, Pessione F
Obstetrical outcomes and maternal morbidities associated with COVID-19 in pregnant women in France: A national retrospective cohort study.
PLoS medicine 2021, 18, e1003857.

Curlier E, Fagour L, Herrmann-Storck C, Staelen A, Vingadassalom I, Breurec S, Abel S, Pierre-François S, Jean-Marie J, Laouénan C, Césaire R, Hoen B, Cabié A
Seroprevalence of chikungunya virus infection among HIV-infected adults in French Caribbean Islands of Martinique and Guadeloupe in 2015: A cross-sectional study.
PLoS neglected tropical diseases 2021, 15, e0009267.

Reynard S, Gloaguen E, Baillet N, Madelain V, Guedj J, Raoul H, de Lamballerie X, Mullaert J, Baize S
Early control of viral load by favipiravir promotes survival to Ebola virus challenge and prevents cytokine storm in non-human primates.
PLoS neglected tropical diseases 2021, 15, e0009300.

Matet A, Fournel L, Gaillard F, Amar L, Arlet JB, Baron S, Bats AS, Buffel du Vaure C, Charlier C, De Lastours V, Faye A, Jablon E, Kadlub N, Leguen J, Lebeaux D, Malmartel A, Mirault T, Planquette B, Régent A, Thebault JL, Dinh AT, Nuzzo A, Turc G, Friedlander G, Ruszniewski P, Badoual C, Ranque B, Oualha M, Courbebaisse M
Impact of integrating objective structured clinical examination into academic student assessment: Large-scale experience in a French medical school.
PloS One 2021, 16, e0245439.

Heid-Picard B, Cochand-Priollet B, Rozenberg F, Giang-Phang D, Viard JP, La Torre V, Ghosn J
Ambulatory anal self-sampling in MSM living with HIV, an acceptable and reliable screening method.
PloS One 2021, 16, e0246338.

Farfour E, Dimi S, Chassany O, Fouéré S, Valin N, Timsit J, Ghosn J, Duvivier C, Duracinsky M, Zucman D, DRIVER study group
Trends in asymptomatic STI among HIV-positive MSM and lessons for systematic screening.
PloS One 2021, 16, e0250557.

d'Humières C, Patrier J, Lortat-Jacob B, Tran-Dinh A, Chemali L, Maataoui N, Rondinaud E, Ruppé E, Burdet C, Ruckly S, Montravers P, Timsit JF, Armand-Lefevre L
Two original observations concerning bacterial infections in COVID-19 patients hospitalized in intensive care units during the first wave of the epidemic in France.
PloS One 2021, 16, e0250728.

Papin G, Bailly S, Dupuis C, Ruckly S, Gainnier M, Argaud L, Azoulay E, Adrie C, Souweine B, Goldgran-Toledano D, Marcotte G, Gros A, Reignier J, Mourvillier B, Forel JM, Sonneville R, Dumenil AS, Darmon M, Garrouste-Orgeas M, Schwebel C, Timsit JF, OUTCOMEREA study group
Clinical and biological clusters of sepsis patients using hierarchical clustering.
PloS One 2021, 16, e0252793.

Dupuis C, de Montmollin E, Buetti N, Goldgran-Toledano D, Reignier J, Schwebel C, Domitile J, Neuville M, Ursino M, Siami S, Ruckly S, Alberti C, Mourvillier B, Bailly S, Laurent V, Gainnier M, Souweine B, Timsit JF, OutcomeReaTM research network
Impact of early corticosteroids on 60-day mortality in critically ill patients with COVID-19: A multicenter cohort study of the OUTCOMEREA network.
PloS One 2021, 16, e0255644.

Deruelle P, Couffignal C, Sibiude J, Vivanti AJ, Anselem O, Luton D, Benachi A, Mandelbrot L, Vauloup-Fellous C, Cordier AG, Picone O
Prenatal care providers' perceptions of the SARS-Cov-2 vaccine for themselves and for pregnant women.
PloS One 2021, 16, e0256080.

Lignieres G, Birgy A, Jung C, Bonacorsi S, Levy C, Angoulvant F, Grimprel E, Dommergues MA, Gillet Y, Craiu I, Rybak A, De Pontual L, Dubos F, Cixous E, Gajdos V, Pinquier D, Andriantahina I, Soussan-Banini V, Georget E, Launay E, Vignaud O, Cohen R, Madhi F
Relay oral therapy in febrile urinary tract infections caused by extended spectrum beta-lactamase-producing Enterobacteriaceae in children: A French multicenter study.
PloS One 2021, 16, e0257217.

Bitty-Anderson AM, Ferré V, Gbeasor-Komlanvi FA, Tchankoni MK, Sadio A, Salou M, Descamps D, Dagnra CA, Charpentier C, Ekouevi DK, Coffie PA
Prevalence of hepatitis B and C among female sex workers in Togo, West Africa.
PloS One 2021, 16, e0259891.

Delaroche L, Bertine M, Oger P, Descamps D, Damond F, Genauzeau E, Meicler P, Le Hingrat Q, Lamazou F, Gschwind R, Ruppé E, Visseaux B
Evaluation of SARS-CoV-2 in semen, seminal plasma, and spermatozoa pellet of COVID-19 patients in the acute stage of infection.
PloS One 2021, 16, e0260187.

Périllaud-Dubois C, Belhadi D, Laouénan C, Mandelbrot L, Picone O, Vauloup-Fellous C
Current practices of management of maternal and congenital Cytomegalovirus infection during pregnancy after a maternal primary infection occurring in first trimester of pregnancy: Systematic review.
PloS One 2021, 16, e0261011.

Evrard D, Jurcisin I, Assadi M, Patrier J, Tafani V, Ullmann N, Timsit JF, Montravers P, Barry B, Weiss E, Rozencwajg S
Tracheostomy in COVID-19 acute respiratory distress syndrome patients and follow-up: A parisian bicentric retrospective cohort.
PloS One 2021, 16, e0261024.

Ouldali N, Yang DD, Madhi F, Levy M, Gaschignard J, Craiu I, Guiddir T, Schweitzer C, Wiedemann A, Lorrot M, Romain AS, Garraffo A, Haas H, Rouget S, de Pontual L, Aupiais C, Martinot A, Toubiana J, Dupic L, Minodier P, Passard M, Belot A, Levy C, Béchet S, Jung C, Sarakbi M, Ducrocq S, Danekova N, Jhaouat I, Vignaud O, Garrec N, Caron E, Cohen R, Gajdos V, Angoulvant F, investigator group of the PANDOR study
Factors Associated With Severe SARS-CoV-2 Infection.
Pediatrics 2021, 147, e2020023432.

Maatoug R, Peiffer-Smadja N, Delval G, Brochu T, Pitrat B, Millet B
Ecological Momentary Assessment Using Smartphones in Patients With Depression: Feasibility Study.
JMIR formative research 2021, 5, e14179.

Frija-Masson J, Mullaert J, Vidal-Petiot E, Pons-Kerjean N, Flamant M, d'Ortho MP
Accuracy of Smart Scales on Weight and Body Composition: Observational Study.
JMIR mHealth and uHealth 2021, 9, e22487.

Denis F, Fontanet A, Le Douarin YM, Le Goff F, Jeanneau S, Lescure FX
A Self-Assessment Web-Based App to Assess Trends of the COVID-19 Pandemic in France: Observational Study.
Journal of Medical Internet Research 2021, 23, e26182.

Denis F, Septans AL, Le Goff F, Jeanneau S, Lescure FX
Analysis of COVID-19 Transmission Sources in France by Self-Assessment Before and After the Partial Lockdown: Observational Study.
Journal of Medical Internet Research 2021, 23, e26932.

Dellière S, Peiffer-Smadja N, João-Lopes M, Cevik M, Pichon M, Bleibtreu A, Schweitzer V, Last K, Ferreira TG, Lemaignen A, Barac A
Aims and challenges of building national trainee networks in clinical microbiology and infectious disease disciplines.
Future Microbiology 2021, 16, 687-695.

Féron F, de Ponfilly GP, Potier L, Gauthier DC, Salle L, Laloi-Michelin M, Munier AL, Jacquier H, Vidal-Trécan T, Julla JB, Carlier A, Abouleka Y, Venteclef N, Grall N, Mercier F, Riveline JP, Senneville É, Gautier JF, Roussel R, Kevorkian JP
Reliability and Safety of Bedside Blind Bone Biopsy Performed by a Diabetologist for the Diagnosis and Treatment of Diabetic Foot Osteomyelitis.
Diabetes Care 2021, 44, 2480-2486.

Geslain G, Miatello J, Barreault S, DE Melo C, Durand P, Deho A, Naudin J, Zitvogel F, Tissieres P, Dauger S, Guilbert AS, Levy M
Pediatric Intensive Care Unit mutation to adult unit during the initial COVID-19 wave: does it make sense?.
Minerva anestesiologica 2021, 87, 121-123.

Bosetti P, Kiem CT, Yazdanpanah Y, Fontanet A, Lina B, Colizza V, Cauchemez S
Impact of mass testing during an epidemic rebound of SARS-CoV-2: a modelling study using the example of France.
Euro Surveillance: Bulletin Europeen Sur Les Maladies Transmissibles = European Communicable Disease Bulletin 2021, 26,

Jolivet S, Couturier J, Vuillemin X, Gouot C, Nesa D, Adam M, Brissot E, Mohty M, Bonnin RA, Dortet L, Barbut F
Outbreak of OXA-48-producing Enterobacterales in a haematological ward associated with an uncommon environmental reservoir, France, 2016 to 2019.
Euro Surveillance: Bulletin Europeen Sur Les Maladies Transmissibles = European Communicable Disease Bulletin 2021, 26,

Tran Kiem C, Crépey P, Bosetti P, Levy Bruhl D, Yazdanpanah Y, Salje H, Boëlle PY, Cauchemez S
Lockdown as a last resort option in case of COVID-19 epidemic rebound: a modelling study.
Euro Surveillance: Bulletin Europeen Sur Les Maladies Transmissibles = European Communicable Disease Bulletin 2021, 26,

Bouchez V, Guillot S, Landier A, Armatys N, Matczak S, French pertussis microbiology study group, Toubiana J, Brisse S
Evolution of Bordetella pertussis over a 23-year period in France, 1996 to 2018.
Euro Surveillance: Bulletin Europeen Sur Les Maladies Transmissibles = European Communicable Disease Bulletin 2021, 26,

Blanquart F, Abad C, Ambroise J, Bernard M, Cosentino G, Giannoli JM, Débarre F
Characterisation of vaccine breakthrough infections of SARS-CoV-2 Delta and Alpha variants and within-host viral load dynamics in the community, France, June to July 2021.
Euro Surveillance: Bulletin Europeen Sur Les Maladies Transmissibles = European Communicable Disease Bulletin 2021, 26, 2100824.

Castry M, Cousien A, Bellet J, Champenois K, Pialoux G, Yazdanpanah Y, Costagliola D, Grabar S, Deuffic-Burban S, French Hospital Database on HIV (ANRS CO4-FHDH Cohort)
Hepatitis C virus (HCV) incidence among men who have sex with men (MSM) living with HIV: results from the French Hospital Database on HIV (ANRS CO4-FHDH) cohort study, 2014 to 2017.
Euro Surveillance: Bulletin Europeen Sur Les Maladies Transmissibles = European Communicable Disease Bulletin 2021, 26,

Gaymard A, Bosetti P, Feri A, Destras G, Enouf V, Andronico A, Burrel S, Behillil S, Sauvage C, Bal A, Morfin F, Van Der Werf S, Josset L, ANRS MIE AC43 COVID-19, French viro COVID group, Blanquart F, Coignard B, Cauchemez S, Lina B
Early assessment of diffusion and possible expansion of SARS-CoV-2 Lineage 20I/501Y.V1 (B.1.1.7, variant of concern 202012/01) in France, January to March 2021.
Euro Surveillance: Bulletin Europeen Sur Les Maladies Transmissibles = European Communicable Disease Bulletin 2021, 26, 2100133.

Travert B, Dossier A, Jamme M, Cointe A, Delmas Y, Malot S, Wynckel A, Seguin A, Presne C, Hie M, Benhamou Y, Ribes D, Choukroun G, Grangé S, Hertig A, Le Gall EC, Galicier L, Daugas E, Bouadma L, Weill FX, Azoulay E, Fakhouri F, Veyradier A, Bonacorsi S, Hogan J, Frémeaux-Bacchi V, Rondeau E, Mariani-Kurkdjian P, Coppo P, Centre de Référence des Microangiopathies Thrombotiques2
Shiga Toxin-Associated Hemolytic Uremic Syndrome in Adults, France, 2009-2017.
Emerging Infectious Diseases 2021, 27, 1876-1885.

Levy C, Ouldali N, Varon E, Béchet S, Bonacorsi S, Cohen R
Post-13-Valent Pneumococcal Conjugate Vaccine Dynamics in Young Children.
Emerging Infectious Diseases 2021, 27, 2240-2241.

Badr DA, Picone O, Bevilacqua E, Carlin A, Meli F, Sibiude J, Mattern J, Fils JF, Mandelbrot L, Lanzone A, De Luca D, Jani JC, Vivanti AJ
Severe Acute Respiratory Syndrome Coronavirus 2 and Pregnancy Outcomes According to Gestational Age at Time of Infection.
Emerging Infectious Diseases 2021, 27, 2535-2543.

Brousse V, Holvoet L, Pescarmona R, Viel S, Perret M, Visseaux B, Ferre VM, Ithier G, Le Van Kim C, Benkerrou M, Missud F, Koehl B
Low incidence of COVID-19 severe complications in a large cohort of children with sickle cell disease: a protective role for basal interferon-1 activation?.
Haematologica 2021

Lebourgeois S, Chenane HR, Houhou-Fidouh N, Menidjel R, Ferré VM, Collin G, Benmalek N, Coppée R, Larrouy L, Yazdanpanah Y, Timsit JF, Charpentier C, Descamps D, Visseaux B
Earlier In Vitro Viral Production With SARS-CoV-2 Alpha Than With Beta, Gamma, B, or A.27 Variants.
Frontiers in Cellular and Infection Microbiology 2021, 11, 792202.

Bonacorsi S, Visseaux B, Bouzid D, Pareja J, Rao SN, Manissero D, Hansen G, Vila J
Systematic Review on the Correlation of Quantitative PCR Cycle Threshold Values of Gastrointestinal Pathogens With Patient Clinical Presentation and Outcomes.
Frontiers in Medicine 2021, 8, 711809.

Sarda-Mantel L, Kaoutar J, Alfaiate T, Lopes A, Paycha F, Benali K, Mikail N, Soussan M, Lemarignier C, Méchaï F, Nagat SL, Montravers F, Deradji O, Durand E, Goulenok T, Ponscarme D, Yéni P, Laouénan C, Rioux C
[ 18 F]FDG Positron Emission Tomography for Initial Staging and Healing Assessment at the End of Therapy in Lymph Nodes and Bone Tuberculosis.
Frontiers in Medicine 2021, 8, 715115.

Milenkov M, Rasoanandrasana S, Rahajamanana LV, Rakotomalala RS, Razafindrakoto CA, Rafalimanana C, Ravelomandranto E, Ravaoarisaina Z, Westeel E, Petitjean M, Mullaert J, Clermont O, Raskine L, Samison LH, Endtz H, Andremont A, Denamur E, Komurian-Pradel F, Armand-Lefevre L
Prevalence, Risk Factors, and Genetic Characterization of Extended-Spectrum Beta-Lactamase Escherichia coli Isolated From Healthy Pregnant Women in Madagascar.
Frontiers in Microbiology 2021, 12, 786146.

Charbonnier L, Rouprêt-Serzec J, Caseris M, Danse M, Cointe A, Cohen L, Faye A, Ouldali N, Gaschignard J
Contribution of Serological Rapid Diagnostic Tests to the Strategy of Contact Tracing in Households Following SARS-CoV-2 Infection Diagnosis in Children.
Frontiers in Pediatrics 2021, 9, 638502.

Bizot E, Bousquet A, Charpié M, Coquelin F, Lefevre S, Le Lorier J, Patin M, Sée P, Sarfati E, Walle S, Visseaux B, Basmaci R
Rhinovirus: A Narrative Review on Its Genetic Characteristics, Pediatric Clinical Presentations, and Pathogenesis.
Frontiers in Pediatrics 2021, 9, 643219.

Guenver C, Oualha M, Levy C, Antona D, Madhi F, Toubiana J, Lachaume N, Javouhey E, Lorrot M, Yang DD, Levy M, Caseris M, Galeotti C, Ovaert C, Wiedemann A, Girardin ML, Rybak A, Cohen R, Belot A, Angoulvant F, Ouldali N
Educational Setting and SARS-CoV-2 Transmission Among Children With Multisystem Inflammatory Syndrome: A French National Surveillance System.
Frontiers in Pediatrics 2021, 9, 745364.

Opota O, Mazza-Stalder J, Viveiros M, Cambau E, Santin M, Goletti D
Editorial: Tuberculosis and Non-tuberculous Mycobacteria Infections: Control, Diagnosis and Treatment..
Frontiers in public health 2021, 9, 666187.

Vagnoni DB, Davidson M, Rubio L, Oetzel GR, Comets E
Effects of Postpartum Supplemental Oral Ca for Dairy Cows Fed Prepartum Dietary Acidogenic Salts.
Animals: an open access journal from MDPI 2021, 11, 3131.

Lescat M, Magnan M, Kenmoe S, Nordmann P, Poirel L
Co-Lateral Effect of Octenidine, Chlorhexidine and Colistin Selective Pressures on Four Enterobacterial Species: A Comparative Genomic Analysis.
Antibiotics (Basel, Switzerland) 2021, 11, 50.

Bonil L, Lingas G, Coupeau D, Lucet JC, Guedj J, Visseaux B, Muylkens B
Survival of SARS-CoV-2 on Non-Porous Materials in an Experimental Setting Representative of Fomites.
Coatings 2021, 11, 371.

Ranke J, Woeltjen J, Schmidt J, Comets E
Taking Kinetic Evaluations of Degradation Data to the Next Level with Nonlinear Mixed-Effects Models.
Environments 2021, 8, 71.

Faraut B, Tonetti L, Malmartel A, Grabar S, Ghosn J, Viard JP, Natale V, Léger D
Sleep, Prospective Memory, and Immune Status among People Living with HIV.
International Journal of Environmental Research and Public Health 2021, 18,

Mohamadi M, Babington-Ashaye A, Lefort A, Flahault A
Risks of Infection with SARS-CoV-2 Due to Contaminated Surfaces: A Scoping Review..
International journal of environmental research and public health 2021, 18,

Fraichard C, Bonnet-Serrano F, Laguillier-Morizot C, Hebert-Schuster M, Lai-Kuen R, Sibiude J, Fournier T, Cohen M, Guibourdenche J
Protease Inhibitor Anti-HIV, Lopinavir, Impairs Placental Endocrine Function.
International Journal of Molecular Sciences 2021, 22, E683.

Ursino M, Dupuis C, Buetti N, de Montmollin E, Bouadma L, Golgran-Toledano D, Ruckly S, Neuville M, Cohen Y, Mourvillier B, Souweine B, Gainnier M, Laurent V, Terzi N, Shiami S, Reignier J, Alberti C, Timsit JF, On Behalf Of The Outcomerea Study Group n
Multistate Modeling of COVID-19 Patients Using a Large Multicentric Prospective Cohort of Critically Ill Patients.
Journal of Clinical Medicine 2021, 10,

Peyrony O, Gamelon D, Brune R, Chauvin A, Ghazali DA, Yordanov Y, Arsicaud A, Gilleron P, Curac S, Richard MC, Feral-Pierssens AL, Villoing B, Beaune S, Goulet H, Fontaine JP, François A, Pirenne F
Red Blood Cell Transfusion in the Emergency Department: An Observational Cross-Sectional Multicenter Study.
Journal of Clinical Medicine 2021, 10, 2475.

Gastli N, Allain M, Lamarque D, Abitbol V, Billoët A, Collobert G, Coriat R, Terris B, Kalach N, Raymond J
Diagnosis of Helicobacter pylori Infection in a Routine Testing Workflow: Effect of Bacterial Load and Virulence Factors.
Journal of Clinical Medicine 2021, 10, 2755.

Jemel S, Guillot J, Kallel K, Jouvion G, Brisebard E, Billaud E, Jullien V, Botterel F, Dannaoui E
In Vivo Efficacy of Voriconazole in a Galleria mellonella Model of Invasive Infection Due to Azole-Susceptible or Resistant Aspergillus fumigatus Isolates.
Journal of Fungi (Basel, Switzerland) 2021, 7, 1012.

Fromentin M, Ricard JD, Roux D
Lung Microbiome in Critically Ill Patients..
Life (Basel, Switzerland) 2021, 12,

Bleibtreu A, Dortet L, Bonnin RA, Wyplosz B, Sacleux SC, Mihaila L, Dupont H, Junot H, Bunel V, Grall N, Razazi K, Duran C, Tattevin P, Dinh A, The Cefiderocol French Study Group OBO
Susceptibility Testing Is Key for the Success of Cefiderocol Treatment: A Retrospective Cohort Study.
Microorganisms 2021

Xu E, Pérez-Torres D, Fragkou PC, Zahar JR, Koulenti D
Nosocomial Pneumonia in the Era of Multidrug-Resistance: Updates in Diagnosis and Management.
Microorganisms 2021

Guérin F, Dejoies L, Degand N, Guet-Revillet H, Janvier F, Corvec S, Barraud O, Guillard T, Walewski V, Gallois E, Cattoir V, On Behalf Of The Gmc Study Group n
In Vitro Antimicrobial Susceptibility Profiles of Gram-Positive Anaerobic Cocci Responsible for Human Invasive Infections.
Microorganisms 2021, 9, 1665.

Rybak A, Yang DD, Schrimpf C, Guedj R, Levy C, Cohen R, Gajdos V, Tort J, Skurnik D, Ouldali N, Angoulvant F
Fall of Community-Acquired Pneumonia in Children following COVID-19 Non-Pharmaceutical Interventions: A Time Series Analysis.
Pathogens (Basel, Switzerland) 2021, 10, 1375.

Brossas JY, Griselda B, Bisio M, Guihenneuc J, Gulin JEN, Jauréguiberry S, Lescure FX, Fekkar A, Mazier D, Altcheh J, Paris L
Evaluation of the Chagas Western Blot IgG Assay for the Diagnosis of Chagas Disease.
Pathogens (Basel, Switzerland) 2021, 10, 1455.

Michelet R, Ursino M, Boulet S, Franck S, Casilag F, Baldry M, Rolff J, van Dyk M, Wicha SG, Sirard JC, Comets E, Zohar S, Kloft C
The Use of Translational Modelling and Simulation to Develop Immunomodulatory Therapy as an Adjunct to Antibiotic Treatment in the Context of Pneumonia.
Pharmaceutics 2021, 13, 601.

Travert B, Rafat C, Mariani P, Cointe A, Dossier A, Coppo P, Joseph A
Shiga Toxin-Associated Hemolytic Uremic Syndrome: Specificities of Adult Patients and Implications for Critical Care Management.
Toxins 2021, 13,

Cointe A, Bizot E, Delannoy S, Fach P, Bidet P, Birgy A, Weill FX, Lefèvre S, Mariani-Kurkdjian P, Bonacorsi S
Emergence of New ST301 Shiga Toxin-Producing Escherichia coli Clones Harboring Extra-Intestinal Virulence Traits in Europe.
Toxins 2021, 13, 686.

Peiffer-Smadja N, Bridier-Nahmias A, Ferré VM, Charpentier C, Garé M, Rioux C, Allemand A, Lavallée P, Ghosn J, Kramer L, Descamps D, Yazdanpanah Y, Visseaux B
Emergence of E484K Mutation Following Bamlanivimab Monotherapy among High-Risk Patients Infected with the Alpha Variant of SARS-CoV-2.
Viruses 2021, 13, 1642.

Ghazali DA, Choquet C, Bouzid D, Colosi L, Ben Hammouda A, Wargon M, Gay M, Vaittinada Ayar P, Douay B, Revue E, Soulat L, Hellmann R, Casalino E
Analysis of the Feasibility of a Vaccination Campaign against Influenza Epidemic and COVID-19 Pandemic in French Emergency Departments: A National Survey.
Vaccines 2021, 9, 400.

Michiels Y, Houhou-Fidouh N, Collin G, Berger J, Kohli E
Impact of Low-Dose Methotrexate-Adalimumab Combination Therapy on the Antibody Response Induced by the mRNA-1273 SARS-CoV-2 Vaccine: Case of an Elderly Patient with Rheumatoid Arthritis.
Vaccines 2021, 9, 883.

Tubiana S, Labarere J, Levraut J, Michelet P, de Vaux FJ, Doumenc B, Hausfater P, Choquet C, Plaisance P, Schmidt J, Mattei V, Gacia O, Storme D, Ray P, Der Sahakian G, Kouka MC, Jainsky L, Raude J, Duval X, Claessens YE
Effectiveness of a Multifaceted Informational-Based and Text Message Reminders on Pneumococcal and Influenza Vaccinations in Hospital Emergency Departments: A Cluster-Randomized Controlled Trial.
Vaccines 2021, 9, 962.

Michiels Y, Houhou-Fidouh N, Collin G, Berger J, Kohli E
Humoral Response Induced by Prime-Boost Vaccination with the ChAdOx1 nCoV-19 and mRNA BNT162b2 Vaccines in a Teriflunomide-Treated Multiple Sclerosis Patient.
Vaccines 2021, 9, 1140.

Lafferre E, Abramowitz L, Walker F, Benabderrhamanne D, Laurain A, Duval X, Tubach F
Anal Dysplasia Among Patients With Multiple Human Papillomavirus Anal Lesions: Mosaic or Homogeneity?.
Annals of Coloproctology 2021, 37, 212-217.

Prodel M, Finkielsztejn L, Roustand L, Nachbaur G, De Leotoing L, Genreau M, Bonnet F, Ghosn J
Costs and mortality associated with HIV: a machine learning analysis of the French national health insurance database.
Journal of Public Health Research 2021, 11,

Tebeka S, Le Strat Y, Etain B, Ray M, Mullaert J, Dubertret C, IGEDEPP Study Group
Childhood Trauma and Perinatal Depression: Data From the IGEDEPP Cohort.
The Journal of Clinical Psychiatry 2021, 82, 20m13664.

Stilma W, Åkerman E, Artigas A, Bentley A, Bos LD, Bosman TJC, de Bruin H, Brummaier T, Buiteman-Kruizinga LA, Carcò F, Chesney G, Chu C, Dark P, Dondorp AM, Gijsbers HJH, Gilder ME, Grieco DL, Inglis R, Laffey JG, Landoni G, Lu W, Maduro LMN, McGready R, McNicholas B, de Mendoza D, Morales-Quinteros L, Nosten F, Papali A, Paternoster G, Paulus F, Pisani L, Prud'homme E, Ricard JD, Roca O, Sartini C, Scaravilli V, Schultz MJ, Sivakorn C, Spronk PE, Sztajnbok J, Trigui Y, Vollman KM, van der Woude MCE
Awake Proning as an Adjunctive Therapy for Refractory Hypoxemia in Non-Intubated Patients with COVID-19 Acute Respiratory Failure: Guidance from an International Group of Healthcare Workers.
The American Journal of Tropical Medicine and Hygiene 2021

Luan L, Fraisse P, Cordel H, Charlois C, Méchaï F, Ibanez G, Hargreaves S, Mechain M, Vignier N
Screening for active and latent TB among migrants in France.
The International Journal of Tuberculosis and Lung Disease: The Official Journal of the International Union Against Tuberculosis and Lung Disease 2021, 25, 903-910.

COVID-19 Research Prioritization Group on MNCAH
Global research priorities on COVID-19 for maternal, newborn, child and adolescent health.
Journal of Global Health 2021, 11, 04071.

Vidal-Petiot E, Mullaert J, Tabibzadeh N, Flamant M
Development and Validation of a Modified Full Age Spectrum Creatinine-Based Equation to Estimate Glomerular Filtration Rate.
Annals of Internal Medicine 2021, 174, 1037-1038.

Marc A, Kerioui M, Blanquart F, Bertrand J, Mitjà O, Corbacho-Monné M, Marks M, Guedj J
Quantifying the relationship between SARS-CoV-2 viral load and infectiousness.
eLife 2021, 10, e69302.

ISARIC Clinical Characterisation Group, Hall MD, Baruch J, Carson G, Citarella BW, Dagens A, Dankwa EA, Donnelly CA, Dunning J, Escher M, Kartsonaki C, Merson L, Pritchard M, Wei J, Horby PW, Rojek A, Olliaro PL
Ten months of temporal variation in the clinical journey of hospitalised patients with COVID-19: An observational cohort.
eLife 2021, 10, e70970.

Casalino E, Bouzid D, Antoniol S, Pinto A, Choquet C, Pereira L, Pavlovsky T, Ing V, Yazdanpanah Y, Ghosn J, Ghazali DA
Characteristics of human immunodeficiency virus exposure and predictors of time until access to postexposure prophylaxis: a prospective observational study.
Emergencias: Revista De La Sociedad Espanola De Medicina De Emergencias 2021, 33, 35-41.

Sibiude J
[Mother-to-child transmission of HIV : a success of prevention].
La Revue Du Praticien 2021, 71, 960-962.

Mercier JC, Ouldali N, Basmaci R
[Multisystemic inflammatory syndrome in children (MIS-C) associated with Covid].
La Revue Du Praticien 2021, 71, 1009-1015.

Driouich JS, Cochin M, Lingas G, Moureau G, Touret F, Petit PR, Piorkowski G, Barthélémy K, Laprie C, Coutard B
Favipiravir antiviral efficacy against SARS-CoV-2 in a hamster model.
Nature communications 2021, 12, 1–13.

Onaisi R, Duvignaud A, Nguyen A, Dupouy J, Chastang J, le Bel J, Landman R, Naccache JM, Lefevre B, Piroth L, Binquet C, Makinson A, Darnaud T, Begue C, Weiss L, Richert L, Anglaret X, Malvy D, Joseph JP, Druais PL, Darmon D, Ral C, Lhomme E, Saint-Lary O
Randomized trial to evaluate the safety and efficacy of outpatient treatments in individuals with Covid-19 with risk factors. COVERAGE France Trial: a structured summary.
Exercer-La Revue Francophone De Medecine Generale 2021, 451-458.

 2020                                                                            

Dequin PF, Heming N, Meziani F, Plantefève G, Voiriot G, Badié J, François B, Aubron C, Ricard JD, Ehrmann S, Jouan Y, Guillon A, Leclerc M, Coffre C, Bourgoin H, Lengellé C, Caille-Fénérol C, Tavernier E, Zohar S, Giraudeau B, Annane D, Le Gouge A, CAPE COVID Trial Group and the CRICS-TriGGERSep Network
Effect of Hydrocortisone on 21-Day Mortality or Respiratory Support Among Critically Ill Patients With COVID-19: A Randomized Clinical Trial.
JAMA 2020, 324, 1298-1306.

Vincent JL, Sakr Y, Singer M, Martin-Loeches I, Machado FR, Marshall JC, Finfer S, Pelosi P, Brazzi L, Aditianingsih D, Timsit JF, Du B, Wittebole X, Máca J, Kannan S, Gorordo-Delsol LA, De Waele JJ, Mehta Y, Bonten MJM, Khanna AK, Kollef M, Human M, Angus DC, EPIC III Investigators
Prevalence and Outcomes of Infection Among Patients in Intensive Care Units in 2017.
JAMA 2020, 323, 1478-1487.

Luyt CE, Forel JM, Hajage D, Jaber S, Cayot-Constantin S, Rimmelé T, Coupez E, Lu Q, Diallo MH, Penot-Ragon C, Clavel M, Schwebel C, Timsit JF, Bedos JP, Hauw-Berlemont C, Bourenne J, Mayaux J, Lefrant JY, Mira JP, Combes A, Wolff M, Chastre J, Papazian L, for the Preemptive Treatment for Herpesviridae Study Group, Réseau Européen de recherche en Ventilation Artificielle Network
Acyclovir for Mechanically Ventilated Patients With Herpes Simplex Virus Oropharyngeal Reactivation: A Randomized Clinical Trial.
JAMA Internal Medicine 2020, 180, 263.

Birgand G, Peiffer-Smadja N, Fournier S, Kerneis S, Lescure FX, Lucet JC
Assessment of Air Contamination by SARS-CoV-2 in Hospital Settings.
JAMA network open 2020, 3, e2033232.

von Cube M, Schumacher M, Putter H, Timsit JF, van de Velde C, Wolkewitz M
The population-attributable fraction for time-dependent exposures using dynamic prediction and landmarking.
Biometrical Journal. Biometrische Zeitschrift 2020, 62, 583-597.

Heyard R, Timsit JF, Held L, COMBACTE-MAGNET consortium
Validation of discrete time-to-event prediction models in the presence of competing risks.
Biometrical Journal. Biometrische Zeitschrift 2020, 62, 643-657.

Moszkowicz D, Duboc H, Dubertret C, Roux D, Bretagnol F
Daily medical education for confined students during coronavirus disease 2019 pandemic: A simple videoconference solution.
Clinical Anatomy (New York, N.Y.) 2020, 33, 927-928.

Ben M'Barek I, Tassin M, Guët A, Simon I, Mairovitz V, Mandelbrot L, Picone O
Antenatal diagnosis of absence of septum pellucidum.
Clinical Case Reports 2020, 8, 498-503.

Mentré F, Friberg LE, Duffull S, French J, Lauffenburger DA, Li L, Mager DE, Sinha V, Sobie E, Zhao P
Pharmacometrics and Systems Pharmacology 2030.
Clinical Pharmacology and Therapeutics 2020, 107, 76-78.

Eloy P, Solas C, Touret F, Mentré F, Malvy D, de Lamballerie X, Guedj J
Dose rationale for favipiravir use in patients infected with SARS-CoV-2.
Clinical Pharmacology and Therapeutics 2020

Foissac F, Zheng Y, Hirt D, Lui G, Bouazza N, Ville Y, Goffinet F, Rozenberg P, Kayem G, Mandelbrot L, Benaboud S, Jarreau PH, Tréluyer JM
Maternal Betamethasone for Prevention of Respiratory Distress Syndrome in Neonates: Population Pharmacokinetic and Pharmacodynamic Approach.
Clinical Pharmacology and Therapeutics 2020, 108, 1026-1035.

Demaret J, Lefèvre G, Vuotto F, Trauet J, Duhamel A, Labreuche J, Varlet P, Dendooven A, Stabler S, Gachet B, Bauer J, Prevost B, Bocket L, Alidjinou EK, Lambert M, Yelnik C, Meresse B, Dubuquoy L, Launay D, Dubucquoi S, Montaigne D, Woitrain E, Maggiotto F, Bou Saleh M, Top I, Elsermans V, Jeanpierre E, Dupont A, Susen S, Brousseau T, Poissy J, Faure K, Labalette M
Severe SARS-CoV-2 patients develop a higher specific T-cell response..
Clinical & translational immunology 2020, 9, e1217.

Fa F, Laup L, Mandelbrot L, Sibiude J, Picone O
Fetal and neonatal abnormalities due to congenital herpes simplex virus infection: a literature review.
Prenatal Diagnosis 2020, 40, 408-414.

Codaccioni C, Picone O, Lambert V, Maurice P, Pomar L, Winer N, Guibaud L, Lavergne RA, Saliou AH, Quinio D, Benachi A, Noel C, Ville Y, Cuillier F, Pomares C, Ferret N, Filisetti D, Weingertner AS, Vequeau-Goua V, Cateau E, Benoist G, Wallon M, Dommergues M, Villena I, Mandelbrot L
Ultrasound features of fetal toxoplasmosis: A contemporary multicenter survey in 88 fetuses.
Prenatal Diagnosis 2020, 40, 1741-1752.

Mandelbrot L
Congenital toxoplasmosis: What is the evidence for chemoprophylaxis to prevent fetal infection?.
Prenatal Diagnosis 2020, 40, 1693-1702.

Madelain V, Mentré F, Baize S, Anglaret X, Laouénan C, Oestereich L, Nguyen THT, Malvy D, Piorkowski G, Graw F, Günther S, Raoul H, de Lamballerie X, Guedj J
Modeling Favipiravir Antiviral Efficacy Against Emerging Viruses: From Animal Studies to Clinical Trials.
CPT: pharmacometrics & systems pharmacology 2020, 9, 258-271.

Gonçalves A, Bertrand J, Ke R, Comets E, de Lamballerie X, Malvy D, Pizzorno A, Terrier O, Rosa Calatrava M, Mentré F, Smith P, Perelson AS, Guedj J
Timing of Antiviral Treatment Initiation is Critical to Reduce SARS-CoV-2 Viral Load.
CPT: pharmacometrics & systems pharmacology 2020, 9, 509-514.

Seurat J, Girard P, Goteti K, Mentré F
Comparison of Various Phase I Combination Therapy Designs in Oncology for Evaluation of Early Tumor Shrinkage Using Simulations.
CPT: pharmacometrics & systems pharmacology 2020, 9, 686-694.

Kerioui M, Mercier F, Bertrand J, Tardivon C, Bruno R, Guedj J, Desmée S
Bayesian inference using Hamiltonian Monte-Carlo algorithm for nonlinear joint modeling in the context of cancer immunotherapy.
Statistics in Medicine 2020, 39, 4853-4868.

Picone O, Mandelbrot L
Role of magnetic resonance imaging in management of congenital cytomegalovirus infection.
Ultrasound in Obstetrics & Gynecology: The Official Journal of the International Society of Ultrasound in Obstetrics and Gynecology 2020, 56, 632.

Augustin P, Tran-Dinh A, Desmard M, Tanaka S, Grall N, Ben-Rehouma M, Arapis K, Ribeiro-Parenti L, Montravers P
Usefulness of Gram stain examination of peritoneal fluid in postoperative peritonitis to guide empirical antibiotherapy.
European Journal of Trauma and Emergency Surgery: Official Publication of the European Trauma Society 2020, 46, 1335-1340.

Roux D, Gaudry S, Dreyfuss D
Conventional amphotericin B should remain in the armamentarium as a cheap and efficient waiting solution.
Intensive Care Medicine 2020, 46, 558-559.

Lucet JC, Harris AD, Guidet B
Less contact isolation is more in the ICU: not sure.
Intensive Care Medicine 2020, 46, 1735-1738.

Denny KJ, Kumar A, Timsit JF, Laupland KB
Extra-cardiac endovascular infections in the critically ill.
Intensive Care Medicine 2020, 46, 173-181.

Saied WI, Martin-Loeches I, Timsit JF
What is new in non-ventilated ICU-acquired pneumonia?.
Intensive Care Medicine 2020, 46, 488-491.

Tabah A, Bassetti M, Kollef MH, Zahar JR, Paiva JA, Timsit JF, Roberts JA, Schouten J, Giamarellou H, Rello J, De Waele J, Shorr AF, Leone M, Poulakou G, Depuydt P, Garnacho-Montero J
Antimicrobial de-escalation in critically ill patients: a position statement from a task force of the European Society of Intensive Care Medicine (ESICM) and European Society of Clinical Microbiology and Infectious Diseases (ESCMID) Critically Ill Patients Study Group (ESGCIP).
Intensive Care Medicine 2020, 46, 245-265.

Birgand G, Schouten J, Ruppé E
Less contact isolation is more in the ICU: con.
Intensive Care Medicine 2020, 46, 1732-1734.

Barbier F, Mer M, Szychowiak P, Miller RF, Mariotte É, Galicier L, Bouadma L, Tattevin P, Azoulay É
Management of HIV-infected patients in the intensive care unit.
Intensive Care Medicine 2020, 46, 329-342.

Timsit JF, Ruppé E, Barbier F, Tabah A, Bassetti M
Bloodstream infections in critically ill patients: an expert statement.
Intensive Care Medicine 2020, 46, 266-284.

Timsit JF, Lipman J, Bassetti M
Antimicrobial de-escalation is part of appropriate antibiotic usage in ICU.
Intensive Care Medicine 2020, 46, 1039-1042.

Bouadma L, Lescure FX, Lucet JC, Yazdanpanah Y, Timsit JF
Severe SARS-CoV-2 infections: practical considerations and management strategy for intensivists.
Intensive Care Medicine 2020, 46, 579-582.

Andremont O, Armand-Lefevre L, Dupuis C, de Montmollin E, Ruckly S, Lucet JC, Smonig R, Magalhaes E, Ruppé E, Mourvillier B, Lebut J, Lermuzeaux M, Sonneville R, Bouadma L, Timsit JF, COMBACTE net consortium
Semi-quantitative cultures of throat and rectal swabs are efficient tests to predict ESBL-Enterobacterales ventilator-associated pneumonia in mechanically ventilated ESBL carriers.
Intensive Care Medicine 2020, 46, 1232-1242.

Abdul-Aziz MH, Alffenaar JWC, Bassetti M, Bracht H, Dimopoulos G, Marriott D, Neely MN, Paiva JA, Pea F, Sjovall F, Timsit JF, Udy AA, Wicha SG, Zeitlinger M, De Waele JJ, Roberts JA, Infection Section of European Society of Intensive Care Medicine (ESICM), Pharmacokinetic/pharmacodynamic and Critically Ill Patient Study Groups of European Society of Clinical Microbiology and Infectious Diseases (ESCMID), Infectious Diseases Group of International Association of Therapeutic Drug Monitoring and Clinical Toxicology (IATDMCT), Infections in the ICU and Sepsis Working Group of International Society of Antimicrobial Chemotherapy (ISAC)
Antimicrobial therapeutic drug monitoring in critically ill adult patients: a Position Paper.
Intensive Care Medicine 2020, 46, 1127-1153.

De Bus L, Depuydt P, Steen J, Dhaese S, De Smet K, Tabah A, Akova M, Cotta MO, De Pascale G, Dimopoulos G, Fujitani S, Garnacho-Montero J, Leone M, Lipman J, Ostermann M, Paiva JA, Schouten J, Sjövall F, Timsit JF, Roberts JA, Zahar JR, Zand F, Zirpe K, De Waele JJ, DIANA study group
Antimicrobial de-escalation in the critically ill patient and assessment of clinical cure: the DIANA study.
Intensive Care Medicine 2020, 46, 1404-1417.

Wicky PH, Henry-Feugeas MC, Para M, de Montmollin E
Uncharted territories: assessing cerebral vascularization in patients undergoing venoarterial extra-corporeal membrane oxygenation.
Intensive Care Medicine 2020, 46, 2079-2080.

Zucman N, Mullaert J, Roux D, Roca O, Ricard JD, Contributors
Prediction of outcome of nasal high flow use during COVID-19-related acute hypoxemic respiratory failure.
Intensive Care Medicine 2020, 46, 1924-1926.

Bassetti M, Kollef MH, Timsit JF
Bacterial and fungal superinfections in critically ill patients with COVID-19.
Intensive Care Medicine 2020, 46, 2071-2074.

Ricard JD, Roca O, Lemiale V, Corley A, Braunlich J, Jones P, Kang BJ, Lellouche F, Nava S, Rittayamai N, Spoletini G, Jaber S, Hernandez G
Use of nasal high flow oxygen during acute respiratory failure.
Intensive Care Medicine 2020, 46, 2238-2247.

Kalil AC, Timsit JF
Less is more: critically ill status is not a carte blanche for unlimited antibiotic use.
Intensive Care Medicine 2020, 46, 2075-2078.

Luyt CE, Bouadma L, Morris AC, Dhanani JA, Kollef M, Lipman J, Martin-Loeches I, Nseir S, Ranzani OT, Roquilly A, Schmidt M, Torres A, Timsit JF
Pulmonary infections complicating ARDS.
Intensive Care Medicine 2020, 46, 2168-2183.

Rochwerg B, Einav S, Chaudhuri D, Mancebo J, Mauri T, Helviz Y, Goligher EC, Jaber S, Ricard JD, Rittayamai N, Roca O, Antonelli M, Maggiore SM, Demoule A, Hodgson CL, Mercat A, Wilcox ME, Granton D, Wang D, Azoulay E, Ouanes-Besbes L, Cinnella G, Rauseo M, Carvalho C, Dessap-Mekontso A, Fraser J, Frat JP, Gomersall C, Grasselli G, Hernandez G, Jog S, Pesenti A, Riviello ED, Slutsky AS, Stapleton RD, Talmor D, Thille AW, Brochard L, Burns KEA
The role for high flow nasal cannula as a respiratory support strategy in adults: a clinical practice guideline.
Intensive Care Medicine 2020, 46, 2226-2237.

Moulignier A, Viret-Vilayphon AC, Lescure FX, Plaisier E, Salomon L, Lamirel C, Pialoux G, ALCOVE Study Group
Microalbuminuria: a sentinel of neurocognitive impairment in HIV-infected individuals?.
Journal of Neurology 2020, 267, 1368-1376.

Boukobza M, Ilic-Habensus E, Duval X, Laissy JP
Acute convexity subarachnoid hemorrhage (cSAH) in infectious endocarditis (IE): imaging features and follow-up.
Journal of Neurology 2020, 267, 2971-2982.

Pilmis B, Alby-Laurent F, Fasola ML, Seegers V, Guery R, Guet-Revillet H, Postaire M, Toubiana J, Bille E, Lortholary O, Zahar JR
Pseudomonas aeruginosa bloodstream infections in children: a 9-year retrospective study.
European Journal of Pediatrics 2020, 179, 1247-1254.

Delbet JD, Geslain G, Auger M, Hogan J, Salomon R, Peuchmaur M, Deschênes G, Buob D, Parmentier C, Ulinski T
Histological prognostic factors in children with Henoch-Schönlein purpura nephritis..
Pediatric nephrology (Berlin, Germany) 2020, 35, 313-320.

Caseris M, Ilharreborde B, Doit C, Simon AL, Vitoux C, Poey N, Bonacorsi S, Mallet C
Is Cutibacterium acnes early surgical site infection rate related to the duration of antibiotic prophylaxis in adolescent idiopathic scoliosis surgery?.
European Spine Journal: Official Publication of the European Spine Society, the European Spinal Deformity Society, and the European Section of the Cervical Spine Research Society 2020, 29, 1499-1504.

Caseris M, Ilharreborde B, Doit C, Simon AL, Vitoux C, Poey N, Bonacorsi S, Mallet C
Correction to: Is Cutibacterium acnes early surgical site infection rate related to the duration of antibiotic prophylaxis in adolescent idiopathic scoliosis surgery?.
European Spine Journal: Official Publication of the European Spine Society, the European Spinal Deformity Society, and the European Section of the Cervical Spine Research Society 2020, 29, 2106.

Senard O, Lafaurie M, Lesprit P, Nguyen Y, Lescure X, Therby A, Fihman V, Oubaya N, Lepeule R
Efficacy of cefoxitin versus carbapenem in febrile male urinary tract infections caused by extended spectrum beta-lactamase–producing Escherichia coli: a multicenter retrospective cohort study with propensity score analysis.
European Journal of Clinical Microbiology & Infectious Diseases 2020, 39, 121-129.

Farfour E, Visseaux B, Pascreau T, Jolly E, Houhou N, Mazaux L, Asso-Bonnet M, Vasse M
The Allplex 2019-nCoV (Seegene) assay: which performances are for SARS-CoV-2 infection diagnosis?.
European Journal of Clinical Microbiology & Infectious Diseases 2020, 39, 1997-2000.

Pelletier AL, Boukris A, Karunakaran S, Dib F, Laouénan C, Hansel B, Arapis K, Abramowitz L
A prospective study of anal symptoms and continence among obese patients before and after bariatric surgery.
Techniques in Coloproctology 2020, 24, 1263-1269.

Bouadma L, Wiedemann A, Patrier J, Surénaud M, Wicky PH, Foucat E, Diehl JL, Hejblum BP, Sinnah F, de Montmollin E, Lacabaratz C, Thiébaut R, Timsit JF, Lévy Y
Immune Alterations in a Patient with SARS-CoV-2-Related Acute Respiratory Distress Syndrome.
Journal of Clinical Immunology 2020, 40, 1082-1092.

Mercier F, Kerioui M, Desmée S, Guedj J, Krieter O, Bruno R
Longitudinal analysis of organ-specific tumor lesion sizes in metastatic colorectal cancer patients receiving first line standard chemotherapy in combination with anti-angiogenic treatment.
Journal of Pharmacokinetics and Pharmacodynamics 2020, 47, 613-625.

Sonneville R, Mazighi M, Bresson D, Crassard I, Crozier S, de Montmollin E, Degos V, Faugeras F, Gayat E, Josse L, Lamy C, Magalhaes E, Maldjian A, Ruckly S, Servan J, Vassel P, Vigué B, Timsit JF, Woimant F, SPICE investigators
Outcomes of Acute Stroke Patients Requiring Mechanical Ventilation: Study Protocol for the SPICE Multicenter Prospective Observational Study.
Neurocritical Care 2020, 32, 624-629.

Magalhaes E, Reuter J, Wanono R, Bouadma L, Jaquet P, Tanaka S, Sinnah F, Ruckly S, Dupuis C, de Montmollin E, Para M, Braham W, Pisani A, d'Ortho MP, Rouvel-Tallec A, Timsit JF, Sonneville R, DINAMO study group
Early EEG for Prognostication Under Venoarterial Extracorporeal Membrane Oxygenation.
Neurocritical Care 2020, 33, 688-694.

Hyafil F, Chequer R, Sorbets E, Estellat C, Ducrocq G, Rouzet F, Alfaiate T, Regaieg H, Abtan J, Leygnac S, Milliner M, Imbert L, Burg S, Ben Azzouna R, Potier L, Laouénan C, Quintin C, Roussel R, Hartemann A, Montalescot G, Marie PY, Steg G, Le Guludec D
Head-to-head comparison of the diagnostic performances of Rubidium-PET and SPECT with CZT camera for the detection of myocardial ischemia in a population of women and overweight individuals.
Journal of Nuclear Cardiology: Official Publication of the American Society of Nuclear Cardiology 2020, 27, 755-768.

Bénézit F, Loubet P, Galtier F, Pronier C, Lenzi N, Lesieur Z, Jouneau S, Lagathu G, L'Honneur AS, Foulongne V, Vallejo C, Alain S, Duval X, Houhou N, Costa Y, Vanhems P, Amour S, Carrat F, Lina B, Launay O, Tattevin P, FLUVAC Study Group
Non-influenza respiratory viruses in adult patients admitted with influenza-like illness: a 3-year prospective multicenter study.
Infection 2020, 48, 489-495.

Pichon M, Joly V, Argy N, Houze S, Bretagne S, Alanio A, Wassef M, Verillaud B, Yazdanpanah Y
Aspergillus flavus malignant external otitis in a diabetic patient: case report and literature review.
Infection 2020, 48, 193-203.

Riglet F, Bertrand J, Barrail-Tran A, Verstuyft C, Michelon H, Benech H, Durrbach A, Furlan V, Barau C
Population Pharmacokinetic Model of Plasma and Cellular Mycophenolic Acid in Kidney Transplant Patients from the CIMTRE Study.
Drugs in R&D 2020, 20, 331-342.

Gouel-Cheron A, Couffignal C, Elmaleh Y, Kantor E, Montravers P
Preliminary observations of anaesthesia ventilators use for prolonged mechanical ventilation in intensive care unit patients during the COVID-19 pandemic.
Anaesthesia, Critical Care & Pain Medicine 2020, 39, 371-372.

Rello J, Belliato M, Dimopoulos MA, Giamarellos-Bourboulis EJ, Jaksic V, Martin-Loeches I, Mporas I, Pelosi P, Poulakou G, Pournaras S, Tamae-Kakazu M, Timsit JF, Waterer G, Tejada S, Dimopoulos G
Update in COVID-19 in the intensive care unit from the 2020 HELLENIC Athens International symposium.
Anaesthesia, Critical Care & Pain Medicine 2020, 39, 723-730.

Louchet M, Sibiude J, Peytavin G, Picone O, Tréluyer JM, Mandelbrot L
Placental transfer and safety in pregnancy of medications under investigation to treat coronavirus disease 2019.
American journal of obstetrics & gynecology MFM 2020, 2, 100159.

Degrelle SA, Chissey A, Stepanian A, Fournier T, Guibourdenche J, Mandelbrot L, Tsatsaris V
Placental Overexpression of Soluble CORIN in Preeclampsia.
The American Journal of Pathology 2020, 190, 970-976.

Rousset L, Sokal A, Vignon-Pennamen MD, Pagis V, Rybojad M, Lecorche E, Mougari F, Bagot M, Bouaziz JD, Jachiet M
[Association of borderline tuberculoid leprosy and tuberculosis: A case report and review of the literature].
Annales De Dermatologie Et De Venereologie 2020, 147, 886-891.

Atallah S, Berçot B, Laurence V, Hoffmann C
Association of Mycoplasma Hominis and head and neck cancer with unknown primary.
European Annals of Otorhinolaryngology, Head and Neck Diseases 2020, 137, 69-71.

Madelain V, Duthey A, Mentré F, Jacquot F, Solas C, Lacarelle B, Vallvé A, Barron S, Barrot L, Mundweiler S, Thomas D, Carbonnelle C, Raoul H, de Lamballerie X, Guedj J
Ribavirin does not potentiate favipiravir antiviral activity against Ebola virus in non-human primates.
Antiviral Research 2020, 177, 104758.

Sallard E, Lescure FX, Yazdanpanah Y, Mentre F, Peiffer-Smadja N
Type 1 interferons as a potential treatment against COVID-19.
Antiviral Research 2020, 178, 104791.

Venisse N, Peytavin G, Bouchet S, Gagnieu MC, Garraffo R, Guilhaumou R, Solas C
Concerns about pharmacokinetic (PK) and pharmacokinetic-pharmacodynamic (PK-PD) studies in the new therapeutic area of COVID-19 infection.
Antiviral Research 2020, 181, 104866.

Mercier JC, Titomanlio L, Basmaci R, Gaschignard J
Risks of severe hyponatremia in children receiving hypotonic fluids.
Archives De Pediatrie: Organe Officiel De La Societe Francaise De Pediatrie 2020

Passaes C, Millet A, Madelain V, Monceaux V, David A, Versmisse P, Sylla N, Gostick E, Llewellyn-Lacey S, Price DA, Blancher A, Dereuddre-Bosquet N, Desjardins D, Pancino G, Le Grand R, Lambotte O, Müller-Trutwin M, Rouzioux C, Guedj J, Avettand-Fenoel V, Vaslin B, Sáez-Cirión A
Optimal Maturation of the SIV-Specific CD8+ T Cell Response after Primary Infection Is Associated with Natural Control of SIV: ANRS SIC Study.
Cell Reports 2020, 32, 108174.

Delacôte C, Bauvin P, Louvet A, Dautrecque F, Ntandja Wandji LC, Lassailly G, Voican C, Perlemuter G, Naveau S, Mathurin P, Deuffic-Burban S
A Model to Identify Heavy Drinkers at High Risk for Liver Disease Progression.
Clinical Gastroenterology and Hepatology: The Official Clinical Practice Journal of the American Gastroenterological Association 2020, 18, 2315-2323.e6.

Thille AW, Coudroy R, Nay MA, Gacouin A, Demoule A, Sonneville R, Beloncle F, Girault C, Dangers L, Lautrette A, Levrat Q, Rouzé A, Vivier E, Lascarrou JB, Ricard JD, Razazi K, Barberet G, Lebert C, Ehrmann S, Massri A, Bourenne J, Pradel G, Bailly P, Terzi N, Dellamonica J, Lacave G, Robert R, Ragot S, Frat JP, HIGH-WEAN Study Group and for the REVA Research Network
Pressure-Support Ventilation vs T-Piece During Spontaneous Breathing Trials Before Extubation Among Patients at High Risk of Extubation Failure: A Post-Hoc Analysis of a Clinical Trial.
Chest 2020, 158, 1446-1455.

Ramirez JA, Musher DM, Evans SE, Dela Cruz C, Crothers KA, Hage CA, Aliberti S, Anzueto A, Arancibia F, Arnold F, Azoulay E, Blasi F, Bordon J, Burdette S, Cao B, Cavallazzi R, Chalmers J, Charles P, Chastre J, Claessens YE, Dean N, Duval X, Fartoukh M, Feldman C, File T, Froes F, Furmanek S, Gnoni M, Lopardo G, Luna C, Maruyama T, Menendez R, Metersky M, Mildvan D, Mortensen E, Niederman MS, Pletz M, Rello J, Restrepo MI, Shindo Y, Torres A, Waterer G, Webb B, Welte T, Witzenrath M, Wunderink R
Treatment of Community-Acquired Pneumonia in Immunocompromised Adults: A Consensus Statement Regarding Initial Strategies.
Chest 2020, 158, 1896-1911.

Chaudhuri D, Granton D, Wang DX, Burns KEA, Helviz Y, Einav S, Trivedi V, Mauri T, Ricard JD, Mancebo J, Frat JP, Jog S, Hernandez G, Maggiore SM, Mbuagbaw L, Hodgson CL, Jaber S, Goligher EC, Brochard L, Rochwerg B
High-Flow Nasal Cannula in the Immediate Postoperative Period: A Systematic Review and Meta-analysis.
Chest 2020, 158, 1934-1946.

Michallet M, Sobh M, Deray G, Gangneux JP, Pigneux A, Larrey D, Ribaud P, Mira JP, Nivoix Y, Yakoub-Agha I, Timsit JF, Alfandari S, Herbrecht R
Antifungal Stewardship in Hematology: Reflection of a Multidisciplinary Group of Experts.
Clinical Lymphoma Myeloma and Leukemia 2020, S2152265020304250.

Loubet P, Tubiana S, Claessens Y, Epelboin L, Ficko C, Le Bel J, Rammaert B, Garin N, Prendki V, Stirnemann J, Leport C, Yazdanpanah Y, Varon E, Duval X, Claessens Y, Duval X, Bouvard E, Carette M, Debray M, Mayaud C, Leport C, Houhou N, Tubiana S, Benjoar M, Blanc F, Brun A, Epelboin L, Ficko C, Khalil A, Lefloch H, Naccache J, Rammaert B, Abry A, Allo J, Andre S, Andreotti C, Baarir N, Bendahou M, Benlafia L, Bernard J, Berthoumieu A, Billemont M, Bokobza J, Brun A, Burggraff E, Canavaggio P, Carette M, Casalino E, Castro S, Choquet C, Clément H, Colosi L, Dabreteau A, Damelincourt S, Dautheville S, Debray M, Delay M, Delerme S, Depierre L, Djamouri F, Dumas F, Fadel M, Feydey A, Freund Y, Garcia L, Goulet H, Hausfater P, Ilic-Habensus E, Josse M, Kansao J, Kieffer Y, Lecomte F, Lemkarane K, Madonna P, Meyniard O, Mzabi L, Pariente D, Pernet J, Perruche F, Piquet J, Ranerison R, Ray P, Renai F, Rouff E, Saget D, Saïdi K, Sauvin G, Trabattoni E, Trimech N, Auger C, Pasquet B, Tamazirt S, Treluyer J, Tubach F, Wang J, Chassany O, Misse C
Community-acquired pneumonia in the emergency department: an algorithm to facilitate diagnosis and guide chest CT scan indication.
Clinical Microbiology and Infection 2020, 26, 382.e1-382.e7.

Peiffer-Smadja N, Rawson TM, Ahmad R, Buchard A, Georgiou P, Lescure FX, Birgand G, Holmes AH
Machine learning for clinical decision support in infectious diseases: a narrative review of current applications.
Clinical Microbiology and Infection: The Official Publication of the European Society of Clinical Microbiology and Infectious Diseases 2020, 26, 584-595.

Ruppé E, Cherkaoui A, Charretier Y, Girard M, Schicklin S, Lazarevic V, Schrenzel J
From genotype to antibiotic susceptibility phenotype in the order Enterobacterales: a clinical perspective.
Clinical Microbiology and Infection: The Official Publication of the European Society of Clinical Microbiology and Infectious Diseases 2020, 26, 643.e1-643.e7.

de Grooth HJ, Timsit JF, Mermel L, Mimoz O, Buetti N, du Cheyron D, Oudemans-van Straaten HM, Parienti JJ, 3SITES, CLEAN and DRESSING groups
Validity of surrogate endpoints assessing central venous catheter-related infection: evidence from individual- and study-level analyses.
Clinical Microbiology and Infection: The Official Publication of the European Society of Clinical Microbiology and Infectious Diseases 2020, 26, 563-571.

Cambau E, Poljak M
Sniffing animals as a diagnostic tool in infectious diseases.
Clinical Microbiology and Infection: The Official Publication of the European Society of Clinical Microbiology and Infectious Diseases 2020, 26, 431-435.

Friberg LE, Guedj J
Acute bacterial or viral infection-What's the difference? A perspective from PKPD modellers.
Clinical Microbiology and Infection: The Official Publication of the European Society of Clinical Microbiology and Infectious Diseases 2020, 26, 1133-1136.

Tubiana S, Varon E, Biron C, Ploy MC, Mourvillier B, Taha MK, Revest M, Poyart C, Martin-Blondel G, Lecuit M, Cua E, Pasquet B, Preau M, Hoen B, Duval X, COMBAT study group
Community-acquired bacterial meningitis in adults: in-hospital prognosis, long-term disability and determinants of outcome in a multicentre prospective cohort.
Clinical Microbiology and Infection: The Official Publication of the European Society of Clinical Microbiology and Infectious Diseases 2020, 26, 1192-1200.

Visseaux B, Hué S, Le Hingrat Q, Salmona M, Lebourgeois S, Delaugerre C, Descamps D, Chaix ML, Ghosn J
Phylogenetic investigation of HCV-4d epidemic in Paris MSM HIV population reveals a still active outbreak and a strong link to the Netherlands.
Clinical Microbiology and Infection: The Official Publication of the European Society of Clinical Microbiology and Infectious Diseases 2020, 26, 785.e1-785.e4.

Peiffer-Smadja N, Dellière S, Rodriguez C, Birgand G, Lescure FX, Fourati S, Ruppé E
Machine learning in the clinical microbiology laboratory: has the time come for routine practice?.
Clinical Microbiology and Infection: The Official Publication of the European Society of Clinical Microbiology and Infectious Diseases 2020, 26, 1300-1309.

Mehlen M, Saunier V, de Barbeyrac B, Gaboriau T, Bébéar C, Bercot B, Castor C, Levesque D, Cazanave C, Puges M
Keep an eye on Neisseria gonorrhoeae.
Clinical Microbiology and Infection: The Official Publication of the European Society of Clinical Microbiology and Infectious Diseases 2020

Peiffer-Smadja N, Lucet JC, Bendjelloul G, Bouadma L, Gerard S, Choquet C, Jacques S, Khalil A, Maisani P, Casalino E, Descamps D, Timsit JF, Yazdanpanah Y, Lescure FX
Challenges and issues about organising a hospital to respond to the COVID-19 outbreak: experience from a French reference centre.
Clinical Microbiology and Infection: The Official Publication of the European Society of Clinical Microbiology and Infectious Diseases 2020

Fragkou PC, Belhadi D, Peiffer-Smadja N, Moschopoulos CD, Lescure FX, Janocha H, Karofylakis E, Yazdanpanah Y, Mentré F, Skevaki C, Laouénan C, Tsiodras S, ESCMID Study Group for Respiratory Viruses
Review of trials currently testing treatment and prevention of COVID-19.
Clinical Microbiology and Infection: The Official Publication of the European Society of Clinical Microbiology and Infectious Diseases 2020, 26, 988-998.

Canovas J, Petitjean G, Chau F, Le Monnier A, Fantin B, Lefort A
Expression of CTX-M-15 limits the efficacy of ceftolozane/tazobactam against Escherichia coli in a high-inoculum murine peritonitis model.
Clinical Microbiology and Infection: The Official Publication of the European Society of Clinical Microbiology and Infectious Diseases 2020, 26, 1416.e5-1416.e9.

Schön T, Werngren J, Machado D, Borroni E, Wijkander M, Lina G, Mouton J, Matuschek E, Kahlmeter G, Giske C, Santin M, Cirillo DM, Viveiros M, Cambau E
Antimicrobial susceptibility testing of Mycobacterium tuberculosis complex isolates - the EUCAST broth microdilution reference method for MIC determination.
Clinical Microbiology and Infection: The Official Publication of the European Society of Clinical Microbiology and Infectious Diseases 2020, 26, 1488-1492.

Schön T, Köser CU, Werngren J, Viveiros M, Georghiou S, Kahlmeter G, Giske C, Maurer F, Lina G, Turnidge J, van Ingen J, Jankovic M, Goletti D, Cirillo DM, Santin M, Cambau E, ESGMYC
What is the role of the EUCAST reference method for MIC testing of the Mycobacterium tuberculosis complex?.
Clinical Microbiology and Infection: The Official Publication of the European Society of Clinical Microbiology and Infectious Diseases 2020, 26, 1453-1455.

Buetti N, Souweine B, Mermel L, Mimoz O, Ruckly S, Loiodice A, Mongardon N, Lucet JC, Parienti JJ, Timsit JF
Concurrent systemic antibiotics at catheter insertion and intravascular catheter-related infection in the ICU: a post hoc analysis using individual data from five large RCTs.
Clinical Microbiology and Infection: The Official Publication of the European Society of Clinical Microbiology and Infectious Diseases 2020

Muff S, Hebeisen U, Timsit JF, Mermel L, Harbarth S, Buetti N
Treatment duration of enterococcal intravascular catheter-related infections.
Clinical Microbiology and Infection: The Official Publication of the European Society of Clinical Microbiology and Infectious Diseases 2020

Hingrat QL, Visseaux B, Laouenan C, Tubiana S, Bouadma L, Yazdanpanah Y, Duval X, Burdet C, Ichou H, Damond F, Bertine M, Benmalek N, Choquet C, Timsit JF, Ghosn J, Charpentier C, Descamps D, Houhou-Fidouh N, French COVID cohort management committee, CoV-CONTACT study group, members of the French-COVID cohort study group (by alphabetical order), member of the CoV-CONTACT study group. Principal investigator, Steering Committee, CoV-CONTACT Clinical Centers, Coordination and statistical analyses, Virological Lab, Biological Center, Partners, Sponsor, Genetic
Detection of SARS-CoV-2 N-antigen in blood during acute COVID-19 provides a sensitive new marker and new testing alternatives.
Clinical Microbiology and Infection: The Official Publication of the European Society of Clinical Microbiology and Infectious Diseases 2020, S1198-743X(20)30721-7.

Tenaillon O, Matic I
The Impact of Neutral Mutations on Genome Evolvability.
Current biology: CB 2020, 30, R527-R534.

Saliba R, Zahar JR, El Allaoui F, Carbonnelle E, Lescat M
Impact of freeze/thaw cycles and single freezing at -80 °C on the viability of aerobic bacteria from rectal swabs performed with the ESwabTM system.
Diagnostic Microbiology and Infectious Disease 2020, 96, 114895.

Rondinaud E, Ruppé E, Matheron S, Lucet JC, Armand-Lefevre L, VOYAG-R study group
Screening methods for intestinal carriage of multidrug-resistant Enterobacterales: interest of enrichment broth.
Diagnostic Microbiology and Infectious Disease 2020, 97, 115079.

Payen M, Pardos de la Gándara M, Cointe A, Massiot A, Bidet P, Weill FX, Bonacorsi S
Diagnostic challenge of gastrointestinal infection due to lactose-fermenting Salmonella enterica subsp. enterica serovar 4,5:I:.
Diagnostic Microbiology and Infectious Disease 2020, 98, 115105.

Cointe A, Birgy A, Pascault A, Louillet F, Dufougeray A, Mariani-Kurkdjian P, Bonacorsi S
Be aware of Shiga-toxin 2f-producing Escherichia coli: case report and false-negative results with certain rapid molecular panels.
Diagnostic Microbiology and Infectious Disease 2020, 98, 115177.

Kohlhauer M, Boissady E, Lidouren F, de Rochefort L, Nadeau M, Rambaud J, Hutin A, Dubuisson RM, Guillot G, Pey P, Bruneval P, Fortin-Pellerin E, Sage M, Walti H, Cariou A, Ricard JD, Berdeaux A, Mongardon N, Ghaleh B, Micheau P, Tissier R
A new paradigm for lung-conservative total liquid ventilation.
EBioMedicine 2020, 52, 102365.

Heggarty E, Sibiude J, Mandelbrot L, Vauloup-Fellous C, Picone O
Genital herpes and pregnancy: Evaluating practices and knowledge of French health care providers.
European Journal of Obstetrics, Gynecology, and Reproductive Biology 2020, 249, 84-91.

Cordier AG, Thubert T, Dussaux C, Santulli P, Dommergues M, Picone O, Benachi A
Evolution of third-trimester pregnancy terminations in France.
European Journal of Obstetrics, Gynecology, and Reproductive Biology 2020, 248, 123-127.

Sibiude J
[Term Prelabor Rupture of Membranes: CNGOF Guidelines for Clinical Practice - Timing of Labor Induction].
Gynecologie, Obstetrique, Fertilite & Senologie 2020, 48, 35-47.

Senat MV, Schmitz T, Bouchghoul H, Diguisto C, Girault A, Paysant S, Sibiude J, Lassel L, Sentilhes L
[Term Prelabor Rupture of Membranes: CNGOF Guidelines for Clinical Practice - Short Text].
Gynecologie, Obstetrique, Fertilite & Senologie 2020, 48, 15-18.

Peyronnet V, Sibiude J, Deruelle P, Huissoud C, Lescure X, Lucet JC, Mandelbrot L, Nisand I, Vayssière C, Yazpandanah Y, Luton D, Picone O
[SARS-CoV-2 infection during pregnancy. Information and proposal of management care. CNGOF].
Gynecologie, Obstetrique, Fertilite & Senologie 2020, 48, 436-443.

Peyronnet V, Sibiude J, Huissoud C, Lescure FX, Lucet JC, Mandelbrot L, Nisand I, Belaish-Allart J, Vayssière C, Yazpandanah Y, Luton D, Picone O
[Infection with SARS-CoV-2 in pregnancy. Update of Information and proposed care. CNGOF].
Gynecologie, Obstetrique, Fertilite & Senologie 2020, 48, 858-870.

Philippot Q, Debray MP, Bun R, Frija-Masson J, Bunel V, Morer L, Roux A, Picard C, Jebrak G, Dauriat G, Castier Y, Cazes A, Mal H, Taupin JL, Couffignal C, Brugière O
Use of CT-SCAN score and volume measures to early identify restrictive allograft syndrome in single lung transplant recipients.
The Journal of Heart and Lung Transplantation: The Official Publication of the International Society for Heart Transplantation 2020, 39, 125-133.

Gatti G, Chocron S, Obadia JF, Duval X, Iung B, Alla F, Chirouze C, Lecompte T, Hoen B, Delahaye F, Tattevin P, Le Moing V, Perrotti A, Association for the Study and Prevention of Infective Endocarditis Study Group – Association pour l'Étude et la Prévention de l'Endocadite Infectieuse (AEPEI)
Using surgical risk scores in nonsurgically treated infective endocarditis patients.
Hellenic journal of cardiology: HJC = Hellenike kardiologike epitheorese 2020, 61, 246-252.

Ouersighni A, Ghazali DA
Contribution of certified registered nurse anaesthetists to the management of the COVID-19 pandemic health crisis.
Intensive & Critical Care Nursing 2020, 60, 102888.

Mizrahi A, Delerue T, Morel H, Le Monnier A, Carbonnelle E, Pilmis B, Zahar JR, on behalf the Saint-Joseph/Avicenna Study Group
Infections caused by naturally AmpC-producing Enterobacteriaceae: Can we use third-generation cephalosporins? A narrative review.
International Journal of Antimicrobial Agents 2020, 55, 105834.

Benchetrit L, Mathy V, Armand-Lefevre L, Bouadma L, Timsit JF
Successful treatment of septic shock due to NDM-1-producing Klebsiella pneumoniae using ceftazidime/avibactam combined with aztreonam in solid organ transplant recipients: report of two cases.
International Journal of Antimicrobial Agents 2020, 55, 105842.

Bonnin RA, Bernabeu S, Jaureguy F, Naas T, Dortet L
MCR-8 mediated colistin resistance in a carbapenem-resistant Klebsiella pneumoniae isolated from a repatriated patient from Morocco.
International Journal of Antimicrobial Agents 2020, 55, 105920.

Deslandes A, Berti V, Tandjaoui-Lambotte Y, Alloui C, Carbonnelle E, Zahar JR, Brichler S, Cohen Y
SARS-CoV-2 was already spreading in France in late December 2019.
International Journal of Antimicrobial Agents 2020, 55, 106006.

André-Garnier E, Hingrat QL, Marcelin AG, Reliquet V, Malet I, Leducq V, Rodallec A, Peytavin G, Ferré V, Charpentier C, Raffi F
Previously unreported emergence of A265V substitution in the integrase gene in association with bictegravir virological failure.
International Journal of Antimicrobial Agents 2020, 106039.

Cloitre A, Lesclous P, Trochu Q, Selton-Suty C, Boutoille D, Le Tourneau T, Delahaye F, Thomas D, Iung B, Gaudin A, Duval X, Trochu JN
Antibiotic prophylaxis of infective endocarditis in patients with predisposing cardiac conditions: French cardiologists' implementation of current guidelines.
International Journal of Cardiology 2020, 299, 222-227.

Peyrony O, Ellouze S, Fontaine JP, Thegat-Le Cam M, Salmona M, Feghoul L, Mahjoub N, Mercier-Delarue S, Gabassi A, Delaugerre C, Le Goff J, Saint-Louis CORE (COvid REsearch) group
Surfaces and equipment contamination by severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) in the emergency department at a university hospital.
International Journal of Hygiene and Environmental Health 2020, 230, 113600.

Berbescu S, Matt M, Dinh A, Simeon S, Noussair L, Armand-Lefevre L, Davido B
Successful treatment of meningococcal bacteremia using oral doxycycline: A case report.
International journal of infectious diseases: IJID: official publication of the International Society for Infectious Diseases 2020, 92, 78-80.

Kargarpour Kamakoli M, Farmanfarmaei G, Masoumi M, Khanipour S, Gharibzadeh S, Sola C, Fateh A, Siadat SD, Refregier G, Vaziri F
Prediction of the hidden genotype of mixed infection strains in Iranian tuberculosis patients..
International journal of infectious diseases : IJID : official publication of the International Society for Infectious Diseases 2020, 95, 22-27.

Dubert M, Visseaux B, Isernia V, Bouadma L, Deconinck L, Patrier J, Wicky PH, Le Pluart D, Kramer L, Rioux C, Le Hingrat Q, Houhou-Fidouh N, Yazdanpanah Y, Ghosn J, Lescure FX
Case report study of the first five COVID-19 patients treated with remdesivir in France.
International Journal of Infectious Diseases 2020, 98, 290-293.

Isernia V, Julia Z, Le Gac S, Bachelard A, Landman R, Lariven S, Joly V, Deconinck L, Rioux C, Lescure X, Yazdanpanah Y, Ghosn J
SARS-COV2 infection in 30 HIV-infected patients followed-up in a French University Hospital.
International journal of infectious diseases: IJID: official publication of the International Society for Infectious Diseases 2020, 101, 49-51.

Tsopra R, Courtine M, Sedki K, Eap D, Cabal M, Cohen S, Bouchaud O, Mechaï F, Lamy JB
AntibioGame®: A serious game for teaching medical students about antibiotic use.
International Journal of Medical Informatics 2020, 136, 104074.

Posthuma LM, Downey C, Visscher MJ, Ghazali DA, Joshi M, Ashrafian H, Khan S, Darzi A, Goldstone J, Preckel B
Remote wireless vital signs monitoring on the ward for early detection of deteriorating patients: A case series.
International Journal of Nursing Studies 2020, 104, 103515.

Battesti G, El Khalifa J, Abdelhedi N, Ferre V, Bouscarat F, Picard-Dahan C, Brunet-Possenti F, Collin G, Lavaud J, Le Bozec P, Rousselot M, Tournier A, Lheure C, Couvelard A, Hacein-Bey-Abina S, Abina AM, Charpentier C, Mignot S, Nicaise P, Descamps D, Deschamps L, Descamps V
New insights in COVID-19–associated chilblains: A comparative study with chilblain lupus erythematosus.
Journal of the American Academy of Dermatology 2020, 83, 1219-1222.

Vautier M, Dupont A, de Boysson H, Comarmond C, Mirault T, Mekinian A, Lambert M, Ferfar Y, Aouba A, Cacoub P, Resche-Rigon M, Saadoun D
Prognosis of large vessel involvement in large vessel vasculitis.
Journal of Autoimmunity 2020, 108, 102419.

Magréault S, Mankikian J, Marchand S, Diot P, Couet W, Flament T, Grégoire N
Pharmacokinetics of colistin after nebulization or intravenous administration of colistin methanesulphonate (Colimycin®) to cystic fibrosis patients.
Journal of Cystic Fibrosis: Official Journal of the European Cystic Fibrosis Society 2020, 19, 421-426.

Vulesevic B, Burwash IG, Beauchesne LM, Cimadevilla C, Siouti L, Tubiana S, Duval X, Nguyen V, Arangalage D, Chan KL, Mulvihill EE, Messika-Zeitoun D
Outcomes of Patients With Discordant High-Gradient Aortic Valve Stenosis.
JACC. Cardiovascular imaging 2020, 13, 1636-1638.

Boursier C, Duval X, Bourdon A, Imbert L, Mahida B, Chevalier E, Claudin M, Hoen B, Goehringer F, Selton-Suty C, Roch V, Lamiral Z, Humbert O, Rouzet F, Marie PY, AEPEI-TEPvENDO study group
ECG-Gated Cardiac FDG PET Acquisitions Significantly Improve Detectability of Infective Endocarditis.
JACC. Cardiovascular imaging 2020, 13, 2691-2693.

Bailly S, Galerneau LM, Ruckly S, Seiller A, Terzi N, Schwebel C, Dupuis C, Tamisier R, Mourvillier B, Pepin JL, Timsit JF
Impact of obstructive sleep apnea on the obesity paradox in critically ill patients.
Journal of Critical Care 2020, 56, 120-124.

Borcoman E, Dupont A, Mariotte E, Doucet L, Joseph A, Chermak A, Valade S, Resche-Rigon M, Azoulay E, Lemiale V
One-year survival in patients with solid tumours discharged alive from the intensive care unit after unplanned admission: A retrospective study.
Journal of Critical Care 2020, 57, 36-41.

Le Breton C, Besset S, Freita-Ramos S, Amouretti M, Billiet PA, Dao M, Dumont LM, Federici L, Gaborieau B, Longrois D, Postel-Vinay P, Vuillard C, Zucman N, Lebreton G, Combes A, Dreyfuss D, Ricard JD, Roux D
Extracorporeal membrane oxygenation for refractory COVID-19 acute respiratory distress syndrome.
Journal of Critical Care 2020, 60, 10-12.

Fellah T, Sibiude J, Vauloup-Fellous C, Cordier AG, Guitton S, Grangeot-Keros L, Benachi A, Mandelbrot L, Picone O
Evolution of awareness and knowledge of congenital cytomegalovirus infection among health care providers in France between 2011 and 2018.
Journal of Clinical Virology: The Official Publication of the Pan American Society for Clinical Virology 2020, 129, 104335.

Egloff C, Vauloup-Fellous C, Picone O, Mandelbrot L, Roques P
Evidence and possible mechanisms of rare maternal-fetal transmission of SARS-CoV-2.
Journal of Clinical Virology: The Official Publication of the Pan American Society for Clinical Virology 2020, 128, 104447.

Visseaux B, Le Hingrat Q, Collin G, Ferré V, Storto A, Ichou H, Bouzid D, Poey N, de Montmollin E, Descamps D, Houhou-Fidouh N
Evaluation of the RealStar® SARS-CoV-2 RT-PCR kit RUO performances and limit of detection.
Journal of Clinical Virology 2020, 129, 104520.

Wirden M, Feghoul L, Bertine M, Nere ML, Le Hingrat Q, Abdi B, Boutolleau D, Ferre VM, Jary A, Delaugerre C, Marcelin AG, Descamps D, Legoff J, Visseaux B, Chaix ML
Multicenter comparison of the Cobas 6800 system with the RealStar RT-PCR kit for the detection of SARS-CoV-2.
Journal of Clinical Virology: The Official Publication of the Pan American Society for Clinical Virology 2020, 130, 104573.

Charpentier C, Ichou H, Damond F, Bouvet E, Chaix ML, Ferré V, Delaugerre C, Mahjoub N, Larrouy L, Le Hingrat Q, Visseaux B, Mackiewicz V, Descamps D, Fidouh-Houhou N
Performance evaluation of two SARS-CoV-2 IgG/IgM rapid tests (Covid-Presto and NG-Test) and one IgG automated immunoassay (Abbott).
Journal of Clinical Virology: The Official Publication of the Pan American Society for Clinical Virology 2020, 132, 104618.

Vazouras K, Velali K, Tassiou I, Anastasiou-Katsiardani A, Athanasopoulou K, Barbouni A, Jackson C, Folgori L, Zaoutis T, Basmaci R, Hsia Y
Antibiotic treatment and antimicrobial resistance in children with urinary tract infections.
Journal of Global Antimicrobial Resistance 2020, 20, 4-10.

Giannelli V, Roux O, Laouénan C, Manchon P, Ausloos F, Bachelet D, Rautou PE, Weiss E, Moreau R, Mebazaa A, Cohen-Solal A, Durand F, Francoz C
Impact of cardiac function, refractory ascites and beta blockers on the outcome of patients with cirrhosis listed for liver transplantation.
Journal of Hepatology 2020, 72, 463-471.

Royer G, Fourreau F, Boulanger B, Mercier-Darty M, Ducellier D, Cizeau F, Potron A, Podglajen I, Mongardon N, Decousser JW
Local outbreak of extended-spectrum β-lactamase SHV2a-producing Pseudomonas aeruginosa reveals the emergence of a new specific sub-lineage of the international ST235 high-risk clone.
The Journal of Hospital Infection 2020, 104, 33-39.

Coppry M, Leroyer C, Saly M, Venier AG, Slekovec C, Bertrand X, Parer S, Alfandari S, Cambau E, Megarbane B, Lawrence C, Clair B, Lepape A, Cassier P, Trivier D, Boyer A, Boulestreau H, Asselineau J, Dubois V, Thiébaut R, Rogues AM
Exogenous acquisition of Pseudomonas aeruginosa in intensive care units: a prospective multi-centre study (DYNAPYO study).
The Journal of Hospital Infection 2020, 104, 40-45.

Saliba R, Aho-Glélé LS, Karam-Sarkis D, Zahar JR
Evaluation of polymerase chain reaction assays for direct screening of carbapenemase-producing Enterobacteriaceae from rectal swabs: a diagnostic meta-analysis.
Journal of Hospital Infection 2020, 104, 381-389.

Pilmis B, Billard-Pomares T, Martin M, Clarempuy C, Lemezo C, Saint-Marc C, Bourlon N, Seytre D, Carbonnelle E, Zahar JR
Can environmental contamination be explained by particular traits associated with patients?.
The Journal of Hospital Infection 2020, 104, 293-297.

Bouzid D, Lucet JC, Duval X, Houhou-Fidouh N, Casalino E, Visseaux B, ED Influenza Management Study Group
Multiplex PCR implementation as point-of-care testing in a French emergency department.
The Journal of Hospital Infection 2020, 105, 337-338.

Jolivet S, Lolom I, Bailly S, Bouadma L, Lortat-Jacob B, Montravers P, Armand-Lefevre L, Timsit JF, Lucet JC
Impact of colonization pressure on acquisition of extended-spectrum β-lactamase-producing Enterobacterales and meticillin-resistant Staphylococcus aureus in two intensive care units: a 19-year retrospective surveillance.
The Journal of Hospital Infection 2020, 105, 10-16.

Hilliquin D, Lomont A, Zahar JR
Cohorting for preventing the nosocomial spread of Carbapenemase-Producing Enterobacterales, in non-epidemic settings: is it mandatory?.
The Journal of Hospital Infection 2020

Chaïbi K, Ferreira TG, Walewski V, Tandjaoui-Lambiotte Y, Patout M
Do not always blame bats and pangolins for acute respiratory failure.
The Journal of Hospital Infection 2020, 105, 793-794.

Sevin T, Goldstein V, Lolom I, Lenne F, Gaudonnet Y, Baptiste AL, Bendjelloul G, Armand-Lefevre L, Lucet JC
Bathroom contamination by antibiotic-resistant Enterobacterales (ESBLPE and CPE): an experimental study.
The Journal of Hospital Infection 2020, 106, 271-276.

Ong C, Lucet JC, Bourigault C, Birgand G, Aho S, Lepelletier D
Staphylococcus aureus nasal decolonization before cardiac and orthopaedic surgeries: first descriptive survey in France.
The Journal of Hospital Infection 2020, 106, 332-334.

Ibn Saied W, Merceron S, Schwebel C, Le Monnier A, Oziel J, Garrouste-Orgeas M, Marcotte G, Ruckly S, Souweine B, Darmon M, Bouadma L, de Montmollin E, Mourvillier B, Reignier J, Papazian L, Siami S, Azoulay E, Bédos JP, Timsit JF
Ventilator-associated pneumonia due to Stenotrophomonas maltophilia: Risk factors and outcome.
The Journal of Infection 2020, 80, 279-285.

de Lastours V, Poirel L, Huttner B, Harbarth S, Denamur E, Nordmann P
Emergence of colistin-resistant Gram-negative Enterobacterales in the gut of patients receiving oral colistin and neomycin decontamination.
The Journal of Infection 2020, 80, 578-606.

Wauquier N, Couffignal C, Manchon P, Smith E, Lungay V, Coomber M, Weisenfluh L, Bangura J, Khan SH, Jambai A, Gbakima A, Yun N, Paessler S, Schoepp R, Morse SS, Gonzalez JP, Fair J, Mentré F, Vieillard V
High heart rate at admission as a predictive factor of mortality in hospitalized patients with Lassa fever: An observational cohort study in Sierra Leone.
The Journal of Infection 2020, 80, 671-693.

Nguyen Y, Corre F, Honsel V, Curac S, Zarrouk V, Fantin B, Galy A
Applicability of the CURB-65 pneumonia severity score for outpatient treatment of COVID-19.
The Journal of Infection 2020, 81, e96-e98.

Gousseff M, Penot P, Gallay L, Batisse D, Benech N, Bouiller K, Collarino R, Conrad A, Slama D, Joseph C, Lemaignen A, Lescure FX, Levy B, Mahevas M, Pozzetto B, Vignier N, Wyplosz B, Salmon D, Goehringer F, Botelho-Nevers E, in behalf of the COCOREC study group
Clinical recurrences of COVID-19 symptoms after recovery: Viral relapse, reinfection or inflammatory rebound?.
The Journal of Infection 2020, 81, 816-846.

Cancella de Abreu M, Choquet C, Petit H, Bouzid D, Damond F, Marot S, Ferre VM, Burrel S, Boutolleau D, Houdou-Fidouh N, Marcelin AG, Descamps D, Hausfater P
SARS-CoV-2 IGM and IGG rapid serologic test for the diagnosis of COVID-19 in the emergency department.
The Journal of Infection 2020, 81, 816-846.

Garrigues E, Janvier P, Kherabi Y, Le Bot A, Hamon A, Gouze H, Doucet L, Berkani S, Oliosi E, Mallart E, Corre F, Zarrouk V, Moyer JD, Galy A, Honsel V, Fantin B, Nguyen Y
Post-discharge persistent symptoms and health-related quality of life after hospitalization for COVID-19.
The Journal of Infection 2020, 81, e4-e6.

Boukobza M, Naggara O, Duval X, Laissy JP
Acute enlargement, morphological changes, and rupture of intracranial infectious aneurysm in infective endocarditis. Serial imaging.
Journal of Clinical Neuroscience: Official Journal of the Neurosurgical Society of Australasia 2020, 82, 237-240.

Louchet M, Dussaux C, Luton D, Goffinet F, Bounan S, Mandelbrot L
Delayed-interval delivery of twins in 13 pregnancies.
Journal of Gynecology Obstetrics and Human Reproduction 2020, 49, 101660.

Blanc-Petitjean P, Legardeur H, Meunier G, Mandelbrot L, Le Ray C, Kayem G
Evaluation of the implementation of a protocol for the restrictive use of oxytocin during spontaneous labor.
Journal of Gynecology Obstetrics and Human Reproduction 2020, 49, 101664.

Egloff C, Tassin M, Bault JP, Barjol A, Collin A, Simon I, Sibiude J, Mandelbrot L, Picone O
Prenatal description of retinal coloboma.
Journal of Gynecology Obstetrics and Human Reproduction 2020, 49, 101746.

Vivanti AJ, Deruelle P, Picone O, Guillaume S, Roze JC, Mulin B, Kochert F, De Beco I, Mahut S, Gantois A, Barasinski C, Petitprez K, Pauchet-Traversat AF, Droy A, Benachi A
Follow-up for pregnant women during the COVID-19 pandemic: French national authority for health recommendations.
Journal of Gynecology Obstetrics and Human Reproduction 2020, 49, 101804.

Vivanti AJ, Deruelle P, Picone O, Guillaume S, Roze JC, Mulin B, Kochert F, De Beco I, Mahut S, Gantois A, Barasinski C, Petitprez K, Pauchet-Traversat AF, Droy A, Benachi A
Post-natal follow-up for women and neonates during the COVID-19 pandemic: French National Authority for Health recommendations.
Journal of Gynecology Obstetrics and Human Reproduction 2020, 49, 101805.

Picone O, Fuchs F, Benoist G, Binquet C, Kieffer F, Wallon M, Wehbe K, Mandelbrot L, Villena I
Toxoplasmosis screening during pregnancy in France: Opinion of an expert panel for the CNGOF.
Journal of Gynecology Obstetrics and Human Reproduction 2020, 49, 101814.

Kayem G, Lecarpentier E, Deruelle P, Bretelle F, Azria E, Blanc J, Bohec C, Bornes M, Ceccaldi PF, Chalet Y, Chauleur C, Cordier AG, Desbrière R, Doret M, Dreyfus M, Driessen M, Fermaut M, Gallot D, Garabédian C, Huissoud C, Luton D, Morel O, Perrotin F, Picone O, Rozenberg P, Sentilhes L, Sroussi J, Vayssière C, Verspyck E, Vivanti AJ, Winer N, Alessandrini V, Schmitz T
A snapshot of the Covid-19 pandemic among pregnant women in France.
Journal of Gynecology Obstetrics and Human Reproduction 2020, 49, 101826.

Commissaire M, Epelboin S, Vigan M, Tubiana S, Llabador MA, Gauché-Cazalis C, Gricourt S, Ferraretto X, Peigné M
Serum progesterone level and ongoing pregnancy rate following frozen-thawed embryo transfer after artificial endometrial preparation: a monocentric retrospective study.
Journal of Gynecology Obstetrics and Human Reproduction 2020, 101828.

Athiel Y, Civadier MS, Luton D, Ceccaldi PF, Bourret A, Sroussi J, Mandelbrot L, Ville Y, Nizard J, Sibony O, Darai E, Delorme P, Fernandez H, Le Begat G, Nublat M, Benachi A, Deffieux X
Impact of the outbreak of SARS-CoV-2 infection on urgent gynecological care.
Journal of Gynecology Obstetrics and Human Reproduction 2020, 49, 101841.

Blanc-Petitjean P, Meunier G, Sibiude J, Mandelbrot L
Evaluation of a policy of restrictive episiotomy on the incidence of perineal tears among women with spontaneous vaginal delivery: A ten-year retrospective study.
Journal of Gynecology Obstetrics and Human Reproduction 2020, 49, 101870.

Egloff C, Sibiude J, Couffignal C, Mandelbrot L, Picone O
Causes and consequences of fever during pregnancy: A retrospective study in a gynaecological emergency department.
Journal of Gynecology Obstetrics and Human Reproduction 2020, 49, 101899.

Gouget H, Noé G, Barrail-Tran A, Furlan V
UPLC-MS/MS method for the simultaneous quantification of bictegravir and 13 others antiretroviral drugs plus cobicistat and ritonavir boosters in human plasma.
Journal of Pharmaceutical and Biomedical Analysis 2020, 181, 113057.

Lurienne L, Cervesi J, Duhalde L, de Gunzburg J, Andremont A, Zalcman G, Buffet R, Bandinelli PA
NSCLC Immunotherapy Efficacy and Antibiotic Use: A Systematic Review and Meta-Analysis.
Journal of Thoracic Oncology: Official Publication of the International Association for the Study of Lung Cancer 2020, 15, 1147-1159.

Jia X, Yamamura T, Gbadegesin R, McNulty MT, Song K, Nagano C, Hitomi Y, Lee D, Aiba Y, Khor SS, Ueno K, Kawai Y, Nagasaki M, Noiri E, Horinouchi T, Kaito H, Hamada R, Okamoto T, Kamei K, Kaku Y, Fujimaru R, Tanaka R, Shima Y, Research Consortium on Genetics of Childhood Idiopathic Nephrotic Syndrome in Japan, Baek J, Kang HG, Ha IS, Han KH, Yang EM, Korean Consortium of Hereditary Renal Diseases in Children, Abeyagunawardena A, Lane B, Chryst-Stangl M, Esezobor C, Solarin A, Midwest Pediatric Nephrology Consortium (Genetics of Nephrotic Syndrome Study Group), Dossier C, Deschênes G, NEPHROVIR, Vivarelli M, Debiec H, Ishikura K, Matsuo M, Nozu K, Ronco P, Cheong HI, Sampson MG, Tokunaga K, Iijima K
Common risk variants in NPHS1 and TNFSF15 are associated with childhood steroid-sensitive nephrotic syndrome.
Kidney International 2020, 98, 1308-1322.

Lopes A, Mougari F, Chopin D, Pogliaghi M, Munier AL, Delcey V, Simoneau G, Raskine L, Evans J, Mouly S, Cambau E, Bergmann JF, Sellier P
Prospective study comparing the conventional and same-day strategies to diagnose pulmonary tuberculosis.
Medecine Et Maladies Infectieuses 2020, 50, 36-42.

Epelboin L, Rapp C, Faucher JF, Méchaï F, Bottieau E, Matheron S, Malvy D, Caumes E
Management and treatment of uncomplicated imported malaria in adults. Update of the French malaria clinical guidelines.
Medecine Et Maladies Infectieuses 2020, 50, 194-212.

Bru JP, Alfandari S, Bleibtreu A, Chavanet P, Gauzit R, Lescure X, Lesprit P, Tattevin P
Carbapenems versus beta-lactam/beta-lactamase inhibitors to treat ESBL-producing Enterobacteriaceae infections.
Medecine Et Maladies Infectieuses 2020, 50, 313-315.

Bleibtreu A, Bertine M, Bertin C, Houhou-Fidouh N, Visseaux B
Focus on Middle East respiratory syndrome coronavirus (MERS-CoV).
Médecine et Maladies Infectieuses 2020, 50, 243-251.

San C, Lê MP, Matheron S, Mourvillier B, Caseris M, Timsit JF, Wolff M, Yazdanpanah Y, Descamps D, Peytavin G
Management of oral antiretroviral administration in patients with swallowing disorders or with an enteral feeding tube.
Medecine Et Maladies Infectieuses 2020, 50, 537-544.

Amarsy R, Pean de Ponfilly GR, Benmansour HA, Jacquier H, Cambau EE, Mégarbane B
Serratia marcescens outbreak in the intensive care unit during the COVID-19 pandemic: A paradoxical risk?.
Medecine Et Maladies Infectieuses 2020, 50, 750-751.

Farfour E, Degand N, Riverain E, Fihman V, Le Brun C, Péan de Ponfilly G, Muggeo A, Jousset A, Piau C, Lesprit P, GMC study group
Fosfomycin, from susceptibility to resistance: Impact of the new guidelines on breakpoints.
Medecine Et Maladies Infectieuses 2020, 50, 611-616.

Charretier Y, Lazarevic V, Schrenzel J, Ruppé E
Messages from the Fourth International Conference on Clinical Metagenomics.
Microbes and Infection 2020, 22, 635-641.

Grohs P, Rondinaud E, Fourar M, Rouis K, Mainardi JL, Podglajen I
Comparative evaluation of the QMAC-dRAST V2.0 system for rapid antibiotic susceptibility testing of Gram-negative blood culture isolates..
Journal of microbiological methods 2020, 172, 105902.

Wuyts W, Marin J, Brusselaers J, Vrancken K
Circular economy as a COVID-19 cure?.
Resources, conservation, and recycling 2020, 162, 105016.

Denis N, Timsit JF, Giaj Levra M, Sakhri L, Duruisseaux M, Schwebel C, Merle P, Pinsolle J, Ferrer L, Moro-Sibilot D, Toffart AC
Impact of systematic advanced care planning in lung cancer patients: A prospective study.
Respiratory Medicine and Research 2020, 77, 11-17.

Le Turnier P, Leport C, Martin P, Jadand C, Hoen B, Guégan JF
Multi-sectorial research is paramount for preventing and controlling emerging infectious diseases.
Revue D'epidemiologie Et De Sante Publique 2020, 68, 133-136.

Lampros A, Montardi C, Journeau L, Georgin-Lavialle S, Hanslik T, Dhôte R, Goujard C, Le Jeunne C, Mahe I, Papo T, Godeau B, Bourgarit A, Fain O, Fantin B, Dzierzynski N, Leblanc J, Nevoret C, Steichen O
[Association between psychiatric comorbidities and hospital length of stay in post-emergency internal medicine patients].
La Revue De Medecine Interne 2020, 41, 360-367.

Vodovar D, Ricard JD, Zafrani L, Weiss E, Desrentes E, Roux D
[Assessment of a newly-implemented blended teaching of intensive care and emergency medicine at Paris-Diderot University].
La Revue De Medecine Interne 2020, 41, 368-374.

Kherabi Y, Chevrel G, Roux D, Federici L
[Gynecological Lemierre's syndrome: A case report and literature review].
La Revue De Medecine Interne 2020

Leroy J, Houzé S, Dardé ML, Yéra H, Rossi B, Delhaes L, Gabriel F, Loubet P, Deleplancque AS, Senneville E, Ajana F, Sendid B, Malvy D
Severe toxoplasmosis imported from tropical Africa in immunocompetent patients: A case series.
Travel Medicine and Infectious Disease 2020, 35, 101509.

Klotoe BJ, Kurepina N, Zholdibayeva E, Panaiotov S, Kreiswirth BN, Anthony R, Sola C, Refrégier G
NTF-RINT, a new method for the epidemiological surveillance of MDR Mycobacterium tuberculosis L2/Beijing strains..
Tuberculosis (Edinburgh, Scotland) 2020, 120, 101894.

Pizzorno A, Padey B, Julien T, Trouillet-Assant S, Traversier A, Errazuriz-Cerda E, Fouret J, Dubois J, Gaymard A, Lescure FX, Dulière V, Brun P, Constant S, Poissy J, Lina B, Yazdanpanah Y, Terrier O, Rosa-Calatrava M
Characterization and Treatment of SARS-CoV-2 in Nasal and Bronchial Human Airway Epithelia.
Cell Reports Medicine 2020, 1, 100059.

Desprairies C, Imbard A, Koehl B, Lorrot M, Gaschignard J, Sommet J, Pichard S, Holvoet L, Faye A, Benkerrou M, Benoist JF, Schiff M
Nitrous oxide and vitamin B12 in sickle cell disease: Not a laughing situation..
Molecular genetics and metabolism reports 2020, 23, 100579.

Gilbert M, Pullano G, Pinotti F, Valdano E, Poletto C, Boëlle PY, D'Ortenzio E, Yazdanpanah Y, Eholie SP, Altmann M, Gutierrez B, Kraemer MUG, Colizza V
Preparedness and vulnerability of African countries against importations of COVID-19: a modelling study.
The Lancet 2020, 395, 871-877.

Jouvin-Marche E, Carrara G, Pulcini C, Andremont A, Danan C, Couderc-Obert C, Lienhardt C, Kieny MP, Yazdanpanah Y
French research strategy to tackle antimicrobial resistance.
The Lancet 2020, 395, 1239-1241.

Norton A, Mphahlele J, Yazdanpanah Y, Piot P, Bayona MT
Strengthening the global effort on COVID-19 research.
The Lancet 2020, S0140673620315981.

Lescure FX, Bouadma L, Nguyen D, Parisey M, Wicky PH, Behillil S, Gaymard A, Bouscambert-Duchamp M, Donati F, Le Hingrat Q, Enouf V, Houhou-Fidouh N, Valette M, Mailles A, Lucet JC, Mentre F, Duval X, Descamps D, Malvy D, Timsit JF, Lina B, van-der-Werf S, Yazdanpanah Y
Clinical and virological data of the first cases of COVID-19 in Europe: a case series.
The Lancet. Infectious Diseases 2020, 20, 697-706.

ISARIC clinical characterisation group
Global outbreak research: harmony not hegemony.
The Lancet. Infectious Diseases 2020, 20, 770-772.

Bielicki JA, Duval X, Gobat N, Goossens H, Koopmans M, Tacconelli E, van der Werf S
Monitoring approaches for health-care workers during the COVID-19 pandemic.
The Lancet. Infectious Diseases 2020, 20, e261-e267.

von Cube M, Timsit JF, Schumacher M, Motschall E, Schumacher M
Quantification and interpretation of attributable mortality in core clinical infectious disease journals.
The Lancet. Infectious Diseases 2020, 20, e299-e306.

Brendish NJ, Poole S, Naidu VV, Mansbridge CT, Norton NJ, Wheeler H, Presland L, Kidd S, Cortes NJ, Borca F, Phan H, Babbage G, Visseaux B, Ewings S, Clark TW
Clinical impact of molecular point-of-care testing for suspected COVID-19 in hospital (COV-19POC): a prospective, interventional, non-randomised, controlled study.
The Lancet. Respiratory Medicine 2020, 8, 1192-1200.

Ouldali N, Cohen R
Reducing the burden of paediatric pneumonia in the most affected populations.
The Lancet. Child & Adolescent Health 2020, 4, 408-409.

Ouldali N, Pouletty M, Mariani P, Beyler C, Blachier A, Bonacorsi S, Danis K, Chomton M, Maurice L, Le Bourgeois F, Caseris M, Gaschignard J, Poline J, Cohen R, Titomanlio L, Faye A, Melki I, Meinzer U
Emergence of Kawasaki disease related to SARS-CoV-2 infection in an epicentre of the French COVID-19 epidemic: a time-series analysis.
The Lancet. Child & Adolescent Health 2020, 4, 662-668.

Atlani-Duault L, Lina B, Malvy D, Yazdanpanah Y, Chauvin F, Delfraissy JF
COVID-19: France grapples with the pragmatics of isolation.
The Lancet. Public Health 2020, 5, e573-e574.

Ghazali DA, Ouersighni A, Gay M, Audebault V, Pavlovsky T, Casalino E
Feedback to Prepare EMS Teams to Manage Infected Patients with COVID-19: A Case Series.
Prehospital and Disaster Medicine 2020, 35, 451-453.

Choudhury A, Fankhauser RG, Freed EF, Oh EJ, Morgenthaler AB, Bassalo MC, Copley SD, Kaar JL, Gill RT
Determinants for Efficient Editing with Cas9-Mediated Recombineering in Escherichia coli.
ACS synthetic biology 2020, 9, 1083-1099.

Heide S, Spentchian M, Valence S, Buratti J, Mach C, Lejeune E, Olin V, Massimello M, Lehalle D, Mouthon L, Whalen S, Faudet A, Mignot C, Garel C, Blondiaux E, Lefebvre M, Quenum-Miraillet G, Chantot-Bastaraud S, Milh M, Bretelle F, Portes Vd, Guibaud L, Putoux A, Tsatsaris V, Spodenkiewic M, Layet V, Dard R, Mandelbrot L, Guet A, Moutton S, Gorce M, Nizon M, Vincent M, Beneteau C, Rocchisanni MA, Benachi A, Saada J, Attié-Bitach T, Guilbaud L, Maurice P, Friszer S, Jouannic JM, de Villemeur TB, Moutard ML, Keren B, Héron D
Prenatal exome sequencing in 65 fetuses with abnormality of the corpus callosum: contribution to further diagnostic delineation.
Genetics in Medicine: Official Journal of the American College of Medical Genetics 2020

Iwasaki RS, Ozdilek BA, Garst AD, Choudhury A, Batey RT
Small molecule regulated sgRNAs enable control of genome editing in E. coli by Cas9.
Nature Communications 2020, 11, 1394.

Liu R, Liang L, Freed EF, Choudhury A, Eckert CA, Gill RT
Engineering regulatory networks for complex phenotypes in E. coli.
Nature Communications 2020, 11, 4050.

Wan C, Bachmann N, Mitov V, Blanquart F, Céspedes SP, Turk T, Neumann K, Beerenwinkel N, Bogojeska J, Fellay J, Roth V, Böni J, Perreau M, Klimkait T, Yerly S, Battegay M, Walti L, Calmy A, Vernazza P, Bernasconi E, Cavassini M, Metzner KJ, Günthard HF, Kouyos RD, Swiss HIV Cohort Study
Heritability of the HIV-1 reservoir size and decay under long-term suppressive ART.
Nature Communications 2020, 11, 5542.

Maisonnasse P, Guedj J, Contreras V, Behillil S, Solas C, Marlin R, Naninck T, Pizzorno A, Lemaitre J, Gonçalves A, Kahlaoui N, Terrier O, Fang RHT, Enouf V, Dereuddre-Bosquet N, Brisebarre A, Touret F, Chapon C, Hoen B, Lina B, Calatrava MR, van der Werf S, de Lamballerie X, Le Grand R
Hydroxychloroquine use against SARS-CoV-2 infection in non-human primates.
Nature 2020, 585, 584-587.

Hobson CA, Bonacorsi S, Hocquet D, Baruchel A, Fahd M, Storme T, Tang R, Doit C, Tenaillon O, Birgy A
Impact of anticancer chemotherapy on the extension of beta-lactamase spectrum: an example with KPC-type carbapenemase activity towards ceftazidime-avibactam.
Scientific Reports 2020, 10, 589.

Coppée R, Sabbagh A, Clain J
Structural and evolutionary analyses of the Plasmodium falciparum chloroquine resistance transporter.
Scientific Reports 2020, 10, 4842.

Siddiqui A, Deneux-Tharaux C, Luton D, Schmitz T, Mandelbrot L, Estellat C, Howell EA, Khoshnood B, Bertille N, Azria E
Maternal obesity and severe pre-eclampsia among immigrant women: a mediation analysis.
Scientific Reports 2020, 10, 5215.

Langlois AC, Manzoni G, Vincensini L, Coppée R, Marinach C, Guérin M, Huby T, Carrière V, Cosset FL, Dreux M, Rubinstein E, Silvie O
Molecular determinants of SR-B1-dependent Plasmodium sporozoite entry into hepatocytes.
Scientific Reports 2020, 10, 13509.

Gachet B, Lecompère M, Croutxé-Barghorn C, Burr D, L'Hostis G, Allonas X
Highly reactive photothermal initiating system based on sulfonium salts for the photoinduced thermal frontal cationic polymerization of epoxides: a way to create carbon-fiber reinforced polymers..
RSC advances 2020, 10, 41915-41920.

Delorme P, Kayem G, Legardeur H, Roux-Dessarps LA, Girard G, Meunier G, Keita H, Mandelbrot L
Carbetocin versus Oxytocin for the Prevention of Postpartum Hemorrhage in Cesarean Deliveries: A Retrospective Study of Two Consecutive Periods.
AJP reports 2020, 10, e241-e246.

Bagshaw SM, Wald R, Adhikari NKJ, Bellomo R, da Costa BR, Dreyfuss D, Du B, Gallagher MP, Gaudry S, Hoste EA, Lamontagne F, Joannidis M, Landoni G, Liu KD, McAuley DF, McGuinness SP, Neyra JA, Nichol AD, Ostermann M, Palevsky PM, Pettilä V, Quenot JP, Qiu H, Rochwerg B, Schneider AG, Smith OM, Thomé F, Thorpe KE, Vaara S, Weir M, Wang AY, Young P, Zarbock A
Timing of Initiation of Renal-Replacement Therapy in Acute Kidney Injury..
The New England journal of medicine 2020, 383, 240-251.

Grein J, Ohmagari N, Shin D, Diaz G, Asperges E, Castagna A, Feldt T, Green G, Green ML, Lescure FX, Nicastri E, Oda R, Yo K, Quiros-Roldan E, Studemeister A, Redinski J, Ahmed S, Bernett J, Chelliah D, Chen D, Chihara S, Cohen SH, Cunningham J, D'Arminio Monforte A, Ismail S, Kato H, Lapadula G, L'Her E, Maeno T, Majumder S, Massari M, Mora-Rillo M, Mutoh Y, Nguyen D, Verweij E, Zoufaly A, Osinusi AO, DeZure A, Zhao Y, Zhong L, Chokkalingam A, Elboudwarej E, Telep L, Timbs L, Henne I, Sellers S, Cao H, Tan SK, Winterbourne L, Desai P, Mera R, Gaggar A, Myers RP, Brainard DM, Childs R, Flanigan T
Compassionate Use of Remdesivir for Patients with Severe Covid-19.
The New England Journal of Medicine 2020

Jacquier H, Vironneau P, Dang H, Verillaud B, Lamers G, Herman P, Vicaut E, Tessier N, Bidet P, Varon E, Van Den Abbeele T, Cambau E, Bercot B, Kania R
Bacterial biofilm in adenoids of children with chronic otitis media. Part II: a case-control study of nasopharyngeal microbiota, virulence, and resistance of biofilms in adenoids.
Acta Oto-Laryngologica 2020, 140, 220-224.

Triki D, Kermarrec M, Visseaux B, Descamps D, Flatters D, Camproux AC, Regad L
Exploration of the effects of sequence variations between HIV-1 and HIV-2 proteases on their three-dimensional structures.
Journal of Biomolecular Structure & Dynamics 2020, 38, 5014-5026.

Nguyen Y, Corre F, Honsel V, Curac S, Zarrouk V, Burtz CP, Weiss E, Moyer JD, Gauss T, Grégory J, Bert F, Trichet C, Peoc'h K, Vilgrain V, Rebours V, Fantin B, Galy A
A nomogram to predict the risk of unfavourable outcome in COVID-19: a retrospective cohort of 279 hospitalized patients in Paris area.
Annals of Medicine 2020, 52, 367-375.

Couffignal C, Papot E, Etienne A, Legac S, Laouénan C, Beres D, Blum L, Khuong-Josses MA, Lepretre A, Papazian P, Yazdanpanah Y, Bouvet E
Treatment as prevention (TasP) and perceived sexual changes in behavior among HIV-positive persons: a French survey in infectious diseases departments in Paris.
AIDS care 2020, 32, 811-817.

Puppo C, Spire B, Morel S, Génin M, Béniguel L, Costagliola D, Ghosn J, Mabire X, Molina JM, Rojas Castro D, Préau M
How PrEP users constitute a community in the MSM population through their specific experience and management of stigmatization. The example of the French ANRS-PREVENIR study.
AIDS Care 2020, 32, 32-39.

Loingeville F, Nguyen TT, Riviere MK, Mentré F
Robust designs in longitudinal studies accounting for parameter and model uncertainties - application to count data.
Journal of Biopharmaceutical Statistics 2020, 30, 31-45.

Teles Abrao Trad A, Ibirogba ER, Elrefaei A, Narang K, Tonni G, Picone O, Suy A, Carreras Moratonas E, Kilby MD, Ruano R
Complications and outcomes of SARS-CoV-2 in pregnancy: where and what is the evidence?.
Hypertension in Pregnancy 2020, 39, 361-369.

Hueso T, Ekpe K, Mayeur C, Gatse A, Joncquel-Chevallier Curt M, Gricourt G, Rodriguez C, Burdet C, Ulmann G, Neut C, Amini SE, Lepage P, Raynard B, Willekens C, Micol JB, De Botton S, Yakoub-Agha I, Gottrand F, Desseyn JL, Thomas M, Woerther PL, Seguy D
Impact and consequences of intensive chemotherapy on intestinal barrier and microbiota in acute myeloid leukemia: the role of mucosal strengthening.
Gut Microbes 2020, 12, 1800897.

Messika J, Boussard N, Guérin C, Michel F, Nseir S, Yonis H, Barbier CM, Rouzé A, Fouilloux V, Gaudry S, Ricard JD, Silverman H, Dreyfuss D
Strengths of the French end-of-life Law as Well as its Shortcomings in Handling Intractable Disputes Between Physicians and Families.
The New Bioethics: A Multidisciplinary Journal of Biotechnology and the Body 2020, 26, 53-74.

Tubiana S, Launay O, Galtier F, Tattevin P, Postil D, Vanhems P, Lenzi N, Verger P, Duval X
Attitudes, knowledge, and willingness to be vaccinated against seasonal influenza among patients hospitalized with influenza-like-illness: impact of diagnostic testing.
Human Vaccines & Immunotherapeutics 2020, 16, 851-857.

Pourbaix A, Zarrouk V, Allaham W, Leflon V, Rousseau MA, Goutagny S, Guigui P, Fantin B
More complications in cervical than in non-cervical spine tuberculosis.
Infectious Diseases (London, England) 2020, 52, 170-176.

Perrineau S, Zarrouk V, Zoghlami M, Allaham W, Leflon-Guibout V, Rousseau MA, Fantin B
Different kinetics of infectious processes in vertebral osteomyelitis of pyogenic or tuberculous origin explain different timing of surgery.
Infectious Diseases (London, England) 2020, 52, 563-570.

Couffignal C, Kolta S, Flamant M, Cazanave C, Haymann JP, Mentré F, Duval X, Leport C, Raffi F, APROCO-COPILOTE ANRS CO8 Study Group
Nevirapine Use Is Associated with Higher Bone Mineral Density in HIV-1 Positive Subjects on Long-Term Antiretroviral Therapy.
AIDS research and human retroviruses 2020, 36, 399-405.

Logre E, Denamur E, Mammeri H
Contribution to Carbapenem Resistance and Fitness Cost of DcuS/DcuR, RcsC/RcsB, and YehU/YehT Two-Component Systems in CTX-M-15-Producing Escherichia coli.
Microbial Drug Resistance (Larchmont, N.Y.) 2020, 26, 349-352.

Lecuru M, Nicolas-Chanoine MH, Tanaka S, Montravers P, Armand-Lefevre L, Denamur E, Mammeri H
Emergence of Imipenem Resistance in a CpxA-H208P-Variant-Producing Proteus mirabilis Clinical Isolate.
Microbial Drug Resistance (Larchmont, N.Y.) 2020

Augustin P, Tanaka S, Tran-Dinh A, Parenti Ribeiro L, Arapis K, Grall N, Al Qarni A, Montravers P
Outcome and Adequacy of Empirical Antibiotherapy in Post-Operative Peritonitis: A Retrospective Study.
Surgical Infections 2020, 21, 284-292.

Daley CL, Iaccarino JM, Lange C, Cambau E, Wallace RJ, Andrejak C, Böttger EC, Brozek J, Griffith DE, Guglielmetti L, Huitt GA, Knight SL, Leitman P, Marras TK, Olivier KN, Santin M, Stout JE, Tortoli E, van Ingen J, Wagner D, Winthrop KL
Treatment of Nontuberculous Mycobacterial Pulmonary Disease: An Official ATS/ERS/ESCMID/IDSA Clinical Practice Guideline..
Clinical infectious diseases : an official publication of the Infectious Diseases Society of America 2020, 71, 905-913.

Woerther PL, Royer G, Decousser JW, Fihman V, Lepeule R
Emergence of Resistance to Carbapenems Should Not Be Considered the Only Marker of Good Practices in Antibiotic Stewardship.
Clinical Infectious Diseases: An Official Publication of the Infectious Diseases Society of America 2020, 71, 2538-2539.

Daley CL, Iaccarino JM, Lange C, Cambau E, Wallace RJJ, Andrejak C, Böttger EC, Brozek J, Griffith DE, Guglielmetti L, Huitt GA, Knight SL, Leitman P, Marras TK, Olivier KN, Santin M, Stout JE, Tortoli E, van Ingen J, Wagner D, Winthrop KL
Treatment of Nontuberculous Mycobacterial Pulmonary Disease: An Official ATS/ERS/ESCMID/IDSA Clinical Practice Guideline..
Clinical infectious diseases : an official publication of the Infectious Diseases Society of America 2020, 71, e1-e36.

Deelen JWT, Rottier WC, Giron Ortega JA, Rodriguez-Baño J, Harbarth S, Tacconelli E, Jacobsson G, Zahar JR, van Werkhoven CH, Bonten MJM
An international prospective cohort study to validate two prediction rules for infections caused by 3rd-generation cephalosporin-resistant Enterobacterales.
Clinical Infectious Diseases 2020, ciaa950.

Woerther PL, Barbier F, Lepeule R, Fihman V, Ruppé É
Assessing the Ecological Benefit of Antibiotic De-escalation Strategies to Elaborate Evidence-Based Recommendations.
Clinical Infectious Diseases: An Official Publication of the Infectious Diseases Society of America 2020, 71, 1128-1129.

Royer G, Fourreau F, Gomart C, Maurand A, Hacquin B, Ducellier D, Cizeau F, Lo S, Cordonnier-Jourdin C, Mercier-Darty M, Decousser JW
Outbreak of an Uncommon Rifampin-resistant blaNDM-1Citrobacter amalonaticus Strain in a Digestive Rehabilitation Center: The Putative Role of Rifaximin.
Clinical Infectious Diseases: An Official Publication of the Infectious Diseases Society of America 2020, 71, 1331-1333.

Levy C, Varon E, Ouldali N, Béchet S, Bonacorsi S, Cohen R
Changes in Invasive Pneumococcal Disease Spectrum After 13-Valent Pneumococcal Conjugate Vaccine Implementation.
Clinical Infectious Diseases: An Official Publication of the Infectious Diseases Society of America 2020, 70, 446-454.

Stegmann-Planchard S, Gallian P, Tressières B, Leparc-Goffart I, Lannuzel A, Signaté A, Laouénan C, Cabié A, Hoen B
Chikungunya, a Risk Factor for Guillain-Barré Syndrome.
Clinical Infectious Diseases: An Official Publication of the Infectious Diseases Society of America 2020, 70, 1233-1235.

Hounkonnou CPA, Briand V, Fievet N, Accrombessi M, Yovo E, Mama A, Sossou D, Vianou B, Massougbodji A, Ndam NT, Cot M, Cottrell G
Dynamics of Submicroscopic Plasmodium falciparum Infections Throughout Pregnancy: A Preconception Cohort Study in Benin.
Clinical Infectious Diseases: An Official Publication of the Infectious Diseases Society of America 2020, 71, 166-174.

Behillil S, May F, Fourati S, Luyt CE, Chicheportiche T, Sonneville R, Tandjaoui-Lambiotte Y, Roux D, Guérin L, Mayaux J, Maury E, Ferré A, Georger JF, Voiriot G, Enouf V, van der Werf S, Dessap AM, de Prost N
Oseltamivir Resistance in Severe Influenza A(H1N1)pdm09 Pneumonia and Acute Respiratory Distress Syndrome: A French Multicenter Observational Cohort Study.
Clinical Infectious Diseases: An Official Publication of the Infectious Diseases Society of America 2020, 71, 1089-1091.

Trouillet-Assant S, Viel S, Ouziel A, Boisselier L, Rebaud P, Basmaci R, Droz N, Belot A, Pons S, Brengel-Pesce K, Gillet Y, Javouhey E, Antoine Study Group
Type I Interferon in Children with Viral or Bacterial Infections.
Clinical Chemistry 2020, 66, 802-808.

Bougouin W, Dumas F, Lamhaut L, Marijon E, Carli P, Combes A, Pirracchio R, Aissaoui N, Karam N, Deye N, Sideris G, Beganton F, Jost D, Cariou A, Jouven X, Sudden Death Expertise Center investigators
Extracorporeal cardiopulmonary resuscitation in out-of-hospital cardiac arrest: a registry study.
European Heart Journal 2020, 41, 1961-1971.

Onorati I, Guiraudet P, Billard-Pomares T, Martinod E
A recurrent lung abscess caused by delayed diagnosis of unique co-infection with Abiotrophia defectiva.
Interactive Cardiovascular and Thoracic Surgery 2020, 31, 909-911.

Tzou PL, Descamps D, Rhee SY, Raugi DN, Charpentier C, Taveira N, Smith RA, Soriano V, de Mendoza C, Holmes SP, Gottlieb GS, Shafer RW
Expanded Spectrum of Antiretroviral-Selected Mutations in Human Immunodeficiency Virus Type 2.
The Journal of Infectious Diseases 2020, 221, 1962-1972.

Melliez H, Mary-Krause M, Guiguet M, Carrieri P, Abgrall S, Enel P, Gallien S, Duval X, Duvivier C, Pavie J, Siguier M, Freire-Maresca A, Tattevin P, Costagliola D
Risk of Severe Bacterial Infection in People Living Human Immunodeficiency Virus Infection in the Combined Antiretroviral Therapy Era.
The Journal of Infectious Diseases 2020, 222, 765-776.

Jary A, Leducq V, Desire N, Petit H, Palich R, Joly V, Canestri A, Gothland A, Lambert-Niclot S, Surgers L, Amiel C, Descamps D, Spano JP, Katlama C, Calvez V, Marcelin AG
New Kaposi's sarcoma-associated herpesvirus variant in men who have sex with men associated with severe pathologies.
The Journal of Infectious Diseases 2020, 222, 1320-1328.

Luong Nguyen LB, Freedberg KA, Wanjala S, Maman D, Szumilin E, Mendiharat P, Yazdanpanah Y
Comparative effectiveness of interventions to improve the HIV continuum of care and HIV Pre-Exposure Prophylaxis in Kenya: a model-based analysis.
The Journal of Infectious Diseases 2020

Costagliola D, Potard V, Lang S, de Castro N, Cotte L, Duval X, Duvivier C, Grabar S, Mary-Krause M, Partisani M, Ronot-Bregigeon S, Simon A, Tattevin P, Weiss L, Zucman D, Katlama C, Raffi F, Boccara F
Is the Risk of Myocardial Infarction in People With Human Immunodeficiency Virus (HIV) Associated With Atazanavir or Darunavir? A Nested Case-Control Study Within the French Hospital Database on HIV.
The Journal of Infectious Diseases 2020, 221, 516-522.

Brice J, Sylla M, Desire N, Sayon S, Telly F, Bocar-Fofana D, Murphy R, Peytavin G, Diallo S, Nastouli E, Calvez V, Marcelin AG, Maiga AI, Lambert-Niclot S
Characterization of drug resistance and the defective HIV reservoir in virally suppressed vertically infected children in Mali.
The Journal of Antimicrobial Chemotherapy 2020, 75, 1272-1279.

Frange P, Tubiana R, Sibiude J, Canestri A, Arvieux C, Brunet-Cartier C, Cotte L, Reynes J, Mandelbrot L, Warszawski J, Le Chenadec J, ANRS EPF CO1/CO11 Study Group
Rilpivirine in HIV-1-positive women initiating pregnancy: to switch or not to switch?.
The Journal of Antimicrobial Chemotherapy 2020, 75, 1324-1331.

Jary A, Marcelin AG, Charpentier C, Wirden M, Lê MP, Peytavin G, Descamps D, Calvez V
M184V/I does not impact the efficacy of abacavir/lamivudine/dolutegravir use as switch therapy in virologically suppressed patients.
The Journal of Antimicrobial Chemotherapy 2020, 75, 1290-1293.

Charpentier C, Peytavin G, Raffi F, Burdet C, Landman R, Lê MP, Katlama C, Collin G, Benalycherif A, Cabie A, Mentré F, Yazdanpanah Y, Descamps D, Joly V
Pharmacovirological analyses of blood and male genital compartment in patients receiving dolutegravir + lamivudine dual therapy as a switch strategy (ANRS 167 LAMIDOL trial).
The Journal of Antimicrobial Chemotherapy 2020, 75, 1611-1617.

Marcelin AG, Charpentier C, Jary A, Perrier M, Margot N, Callebaut C, Calvez V, Descamps D
Frequency of capsid substitutions associated with GS-6207 in vitro resistance in HIV-1 from antiretroviral-naive and -experienced patients.
The Journal of Antimicrobial Chemotherapy 2020, 75, 1588-1590.

Chilton CH, Crowther GS, Miossec C, de Gunzburg J, Andremont A, Wilcox MH
Investigation of the effect of the adsorbent DAV131A on the propensity of moxifloxacin to induce simulated Clostridioides (Clostridium) difficile infection (CDI) in an in vitro human gut model.
The Journal of Antimicrobial Chemotherapy 2020, 75, 1458-1465.

Soulie C, Assoumou L, Abdi B, Sayon S, Nguyen T, Valantin MA, Beniguel L, Ferre V, Alloui C, Montes B, Avettand-Fenoel V, Delaugerre C, Descamps D, Martinez E, Reynes J, Peytavin G, Costagliola D, Katlama C, Calvez V, Marcelin AG, A1Esg
Characterization of viral rebounds on dual etravirine/raltegravir maintenance therapy (ANRS-163 ETRAL trial).
The Journal of Antimicrobial Chemotherapy 2020, 75, 1943-1949.

Soulie C, Assoumou L, Abdi B, Sayon S, Nguyen T, Valantin MA, Beniguel L, Ferre V, Alloui C, Montes B, Avettand-Fenoel V, Delaugerre C, Descamps D, Martinez E, Reynes J, Peytavin G, Costagliola D, Katlama C, Calvez V, Marcelin AG, ANRS-163 ETRAL study group
Characterization of viral rebounds on dual etravirine/raltegravir maintenance therapy (ANRS-163 ETRAL trial).
The Journal of Antimicrobial Chemotherapy 2020, 75, 1943-1949.

Boyd A, Miailhes P, Chas J, Valantin MA, Yazdanpanah Y, Rosenthal E, Chevaliez S, Piroth L, Rougier H, Peytavin G, Pialoux G, Girard PM, Lacombe K
Grazoprevir/elbasvir for the immediate treatment of recently acquired HCV genotype 1 or 4 infection in MSM.
The Journal of Antimicrobial Chemotherapy 2020, 75, 1961-1968.

Caméléna F, Morel F, Merimèche M, Decousser JW, Jacquier H, Clermont O, Darty M, Mainardis M, Cambau E, Tenaillon O, Denamur E, Berçot B, IAME Resistance Group
Genomic characterization of 16S rRNA methyltransferase-producing Escherichia coli isolates from the Parisian area, France.
The Journal of Antimicrobial Chemotherapy 2020, 75, 1726-1735.

Alain S, Feghoul L, Girault S, Lepiller Q, Frobert E, Michonneau D, Berceanu A, Ducastelle-Lepretre S, Tilloy V, Guerin E, Le Goff J, Peytavin G, Hantz S
Letermovir breakthroughs during the French Named Patient Programme: interest of monitoring blood concentration in clinical practice.
The Journal of Antimicrobial Chemotherapy 2020, 75, 2253-2257.

de Lastours V, Laouénan C, Royer G, Carbonnelle E, Lepeule R, Esposito-Farèse M, Clermont O, Duval X, Fantin B, Mentré F, Decousser JW, Denamur E, Lefort A
Mortality in Escherichia coli bloodstream infections: antibiotic resistance still does not make it.
The Journal of Antimicrobial Chemotherapy 2020, 75, 2334-2343.

Delory T, Jeanmougin P, Lariven S, Aubert JP, Peiffer-Smadja N, Boëlle PY, Bouvet E, Lescure FX, Le Bel J
A computerized decision support system (CDSS) for antibiotic prescription in primary care-Antibioclic: implementation, adoption and sustainable use in the era of extended antimicrobial resistance.
The Journal of Antimicrobial Chemotherapy 2020, 75, 2353-2362.

Dejoies L, Boukthir S, Péan de Ponfilly G, Le Guen R, Zouari A, Potrel S, Collet A, Auger G, Jacquier H, Fihman V, Dortet L, Cattoir V
Performance of commercial methods for linezolid susceptibility testing of Enterococcus faecium and Enterococcus faecalis.
The Journal of Antimicrobial Chemotherapy 2020, 75, 2587-2593.

Muggeo A, Cambau E, Amara M, Micaëlo M, Pangon B, Bajolet O, Benmansour H, de Champs C, Guillard T
Phenotypic and genotypic quinolone resistance in Escherichia coli underlining GyrA83/87 mutations as a target to detect ciprofloxacin resistance.
The Journal of Antimicrobial Chemotherapy 2020, 75, 2466-2470.

Lê MP, Peiffer-Smadja N, Guedj J, Néant N, Mentré F, Ader F, Yazdanpanah Y, Peytavin G
Rationale of a loading dose initiation for hydroxychloroquine treatment in COVID-19 infection in the DisCoVeRy trial.
The Journal of Antimicrobial Chemotherapy 2020, 75, 2376-2380.

Kauv J, Lê MP, Veyrier M, Le Hingrat Q, Visseaux B, Massias L, Chauveheid MP, Descamps D, Ghosn J, Peytavin G
Failure of hydroxychloroquine pre-exposure prophylaxis in COVID-19 infection? A case report.
The Journal of Antimicrobial Chemotherapy 2020, 75, 2706-2707.

Peiffer-Smadja N, Lescure FX, Sallard E, Ravaud P, Vegreville B, Zeitoun JD
Anticovid, a comprehensive open-access real-time platform of registered clinical studies for COVID-19.
Journal of Antimicrobial Chemotherapy 2020, 75, 2708-2710.

Lê MP, Jaquet P, Patrier J, Wicky PH, Le Hingrat Q, Veyrier M, Kauv J, Sonneville R, Visseaux B, Laouénan C, Bouadma L, Descamps D, de Montmollin E, Peytavin G, Timsit JF
Pharmacokinetics of lopinavir/ritonavir oral solution to treat COVID-19 in mechanically ventilated ICU patients.
The Journal of Antimicrobial Chemotherapy 2020, 75, 2657-2660.

Palich R, Wirden M, Peytavin G, Lê MP, Seang S, Abdi B, Schneider L, Tubiana R, Valantin MA, Paccoud O, Soulié C, Calvez V, Katlama C, Marcelin AG
Persistent low-level viraemia in antiretroviral treatment-experienced patients is not linked to viral resistance or inadequate drug concentrations.
The Journal of Antimicrobial Chemotherapy 2020, 75, 2981-2985.

Hobson CA, Cointe A, Bidet P, Poupon J, Bonacorsi S, Birgy A
Urine zinc concentrations allow proper expression of metallo-β-lactamases in Enterobacteriaceae.
The Journal of Antimicrobial Chemotherapy 2020, 75, 3077-3079.

Katlama C, Assoumou L, Valantin MA, Soulié C, Martinez E, Béniguel L, Bouchaud O, Raffi F, Molina JM, Fellahi S, Peytavin G, Marcelin AG, Kolta S, Capeau J, Gibowski S, Cardon F, Reynes J, Costagliola D
Dual therapy combining raltegravir with etravirine maintains a high level of viral suppression over 96 weeks in long-term experienced HIV-infected individuals over 45 years on a PI-based regimen: results from the Phase II ANRS 163 ETRAL study-authors' response.
The Journal of Antimicrobial Chemotherapy 2020, 75, 3699-3700.

Bortolaia V, Kaas RS, Ruppe E, Roberts MC, Schwarz S, Cattoir V, Philippon A, Allesoe RL, Rebelo AR, Florensa AF, Fagelhauer L, Chakraborty T, Neumann B, Werner G, Bender JK, Stingl K, Nguyen M, Coppens J, Xavier BB, Malhotra-Kumar S, Westh H, Pinholt M, Anjum MF, Duggett NA, Kempf I, Nykäsenoja S, Olkkola S, Wieczorek K, Amaro A, Clemente L, Mossong J, Losch S, Ragimbeau C, Lund O, Aarestrup FM
ResFinder 4.0 for predictions of phenotypes from genotypes.
The Journal of Antimicrobial Chemotherapy 2020, 75, 3491-3500.

Cheminet G, de Lastours V, Poirel L, Chau F, Peoc'h K, Massias L, Fantin B, Nordmann P
Dimercaptosuccinic acid in combination with carbapenems against isogenic strains of Escherichia coli producing or not producing a metallo-β-lactamase in vitro and in murine peritonitis.
The Journal of Antimicrobial Chemotherapy 2020, 75, 3593-3600.

Mellon G, Hammas K, Burdet C, Duval X, Carette C, El-Helali N, Massias L, Mentré F, Czernichow S, Crémieux AC
Population pharmacokinetics and dosing simulations of amoxicillin in obese adults receiving co-amoxiclav.
The Journal of Antimicrobial Chemotherapy 2020, 75, 3611-3618.

Visseaux B, Assoumou L, Mahjoub N, Grude M, Trabaud MA, Raymond S, Wirden M, Morand-Joubert L, Roussel C, Montes B, Bocket L, Fafi-Kremer S, Amiel C, De Monte A, Stefic K, Pallier C, Tumiotto C, Maillard A, Vallet S, Ferre V, Bouvier-Alias M, Dina J, Signori-Schmuck A, Carles MJ, Plantier JC, Meyer L, Descamps D, Chaix ML, AARG
Surveillance of HIV-1 primary infections in France from 2014 to 2016: toward stable resistance, but higher diversity, clustering and virulence?.
The Journal of Antimicrobial Chemotherapy 2020, 75, 183-193.

Visseaux B, Assoumou L, Mahjoub N, Grude M, Trabaud MA, Raymond S, Wirden M, Morand-Joubert L, Roussel C, Montes B, Bocket L, Fafi-Kremer S, Amiel C, De Monte A, Stefic K, Pallier C, Tumiotto C, Maillard A, Vallet S, Ferre V, Bouvier-Alias M, Dina J, Signori-Schmuck A, Carles MJ, Plantier JC, Meyer L, Descamps D, Chaix ML, AC43 ANRS Resistance Group
Surveillance of HIV-1 primary infections in France from 2014 to 2016: toward stable resistance, but higher diversity, clustering and virulence?.
The Journal of Antimicrobial Chemotherapy 2020, 75, 183-193.

Tzou PL, Rhee SY, Descamps D, Clutter DS, Hare B, Mor O, Grude M, Parkin N, Jordan MR, Bertagnolio S, Schapiro JM, Harrigan PR, Geretti AM, Marcelin AG, Shafer RW, WHO HIVResNet Working Groups
Integrase strand transfer inhibitor (INSTI)-resistance mutations for the surveillance of transmitted HIV-1 drug resistance.
The Journal of Antimicrobial Chemotherapy 2020, 75, 170-182.

Birgy A, Madhi F, Jung C, Levy C, Cointe A, Bidet P, Hobson CA, Bechet S, Sobral E, Vuthien H, Ferroni A, Aberrane S, Cuzon G, Beraud L, Gajdos V, Launay E, Pinquier D, Haas H, Desmarest M, Dommergues MA, Cohen R, Bonacorsi S, Group of the National Observatory of Urinary tract Infection due to ESBL-producing Enterobacteriaceae in children
Diversity and trends in population structure of ESBL-producing Enterobacteriaceae in febrile urinary tract infections in children in France from 2014 to 2017.
The Journal of Antimicrobial Chemotherapy 2020, 75, 96-105.

Tebano G, Soulié C, Schneider L, Blanc C, Agher R, Seang S, Valantin MA, Palich R, Tubiana R, Peytavin G, Marcelin AG, Assoumou L, Katlama C
Long-term follow-up of HIV-infected patients on dolutegravir monotherapy.
The Journal of Antimicrobial Chemotherapy 2020, 75, 675-680.

Cointe A, Birgy A, Bridier-Nahmias A, Mariani-Kurkdjian P, Walewski V, Lévy C, Cohen R, Fach P, Delannoy S, Bidet P, Bonacorsi S
Escherichia coli O80 hybrid pathotype strains producing Shiga toxin and ESBL: molecular characterization and potential therapeutic options.
The Journal of Antimicrobial Chemotherapy 2020, 75, 537-542.

Maataoui N, Langendorf C, Berthe F, Bayjanov JR, van Schaik W, Isanaka S, Grais RF, Clermont O, Andremont A, Armand-Lefèvre L, Woerther PL
Increased risk of acquisition and transmission of ESBL-producing Enterobacteriaceae in malnourished children exposed to amoxicillin.
The Journal of Antimicrobial Chemotherapy 2020, 75, 709-717.

Soulie C, Santoro MM, Storto A, Abdi B, Charpentier C, Armenia D, Jary A, Forbici F, Bertoli A, Gennari W, Andreoni M, Mussini C, Antinori A, Perno CF, Calvez V, Ceccherini-Silberstein F, Descamps D, Marcelin AG
Prevalence of doravirine-associated resistance mutations in HIV-1-infected antiretroviral-experienced patients from two large databases in France and Italy.
The Journal of Antimicrobial Chemotherapy 2020, 75, 1026-1030.

Atwine D, Baudin E, Gelé T, Muyindike W, Mworozi K, Kyohairwe R, Kananura K, Orikiriza P, Nyehangane D, K T Nanjebe D, Furlan V, Verstuyft C, Barrail-Tran A, Taburet AM, Bonnet M, ANRS 12292 Rifavirenz study group
Effect of high-dose rifampicin on efavirenz pharmacokinetics: drug-drug interaction randomized trial.
The Journal of Antimicrobial Chemotherapy 2020, 75, 1250-1258.

Argy N, Lariven S, Rideau A, Lemoine A, Bourgeois Moine A, Allal L, Choudat L, Ravel C, Michard F, Buffet P, Faye A, Houze S, Yazdanpanah Y
Congenital Leishmaniasis in a Newborn Infant Whose Mother was Coinfected With Leishmaniasis and HIV.
Journal of the Pediatric Infectious Diseases Society 2020, 9, 277-280.

Manceau M, Marin J, Morlon H, Lambert A
Model-Based Inference of Punctuated Molecular Evolution..
Molecular biology and evolution 2020, 37, 3308-3323.

Halfon M, Bachelet D, Hanouna G, Dema B, Pellefigues C, Manchon P, Laouenan C, Charles N, Daugas E
CD62L on blood basophils: a first pre-treatment predictor of remission in severe lupus nephritis.
Nephrology, Dialysis, Transplantation: Official Publication of the European Dialysis and Transplant Association - European Renal Association 2020

Lescure FX, Fellahi S, Pialoux G, Bastard JP, Eme AL, Esteve E, Lebrette MG, Guiard-Schmid JB, Capeau J, Ronco P, Costagliola D, Plaisier E
Prevalence of tubulopathy and association with renal function loss in HIV-infected patients.
Nephrology, Dialysis, Transplantation: Official Publication of the European Dialysis and Transplant Association - European Renal Association 2020, 35, 607-615.

Limonta S, Cambau E, Erpelding ML, Piau-Couapel C, Goehringer F, Plésiat P, Revest M, Vernet-Garnier V, Moing VL, Hoen B, Duval X, Tattevin P, EI 2008 de l’AEPEI working group
Infective Endocarditis Related to Unusual Microorganisms: A Prospective Population-Based Study.
Open Forum Infectious Diseases 2020, 7, ofaa127.

Jacquier H, Péan de Ponfilly G, Chauvin A, Amarsy R, Benmansour H, Hoang-Nguyen DT, Lecorché E, Mesnil C, Mougari F, Munier AL, Salmona M, Berçot B, Le Goff J, Cambau E
Impact of a 24/7 Rapid Molecular Assay for Influenza Detection on the Prescription of Oseltamivir.
Open Forum Infectious Diseases 2020, 7, ofaa374.

Pichon M, Claire LP, Genet P, Caby F, Yazdanpanah Y, Menn AM
Adult-onset Still's disease in a patient with human immunodeficiency virus infection: pathophysiological link?.
Rheumatology (Oxford, England) 2020, 59, e99-e101.

Bello G, Delatorre E, Lacoste V, Darcissac E, Herrmann-Storck C, Tressières B, Cabras O, Lamaury I, Cabié A, Visseaux B, Chaix ML, Descamps D, Césaire R, Nacher M, Dos Santos G
Increasing prevalence and local transmission of non-B HIV-1 subtypes in the French Antilles and French Guiana between 1995 and 2018.
Virus Evolution 2020, 6, veaa081.

Couffignal C, Amour J, Ait-Hamou N, Cholley B, Fellahi JL, Duval X, Costa De Beauregard Y, Nataf P, Dilly MP, Provenchère S, Montravers P, Mentré F, Longrois D
Timing of β-Blocker Reintroduction and the Occurrence of Postoperative Atrial Fibrillation after Cardiac Surgery: A Prospective Cohort Study.
Anesthesiology 2020, 132, 267-279.

Tanaka S, Genève C, Zappella N, Yong-Sang J, Planesse C, Louedec L, Viranaïcken W, Bringart M, Montravers P, Denamur E, Duranteau J, Couret D, Meilhac O
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Anesthesiology 2020, 132, 825-838.

Reuter J, Peoc'h K, Bouadma L, Ruckly S, Chicha-Cattoir V, Faille D, Bourrienne MC, Dupuis C, Magalhaes E, Tanaka S, Vinclair C, de Montmollin E, Mazighi M, Para M, Braham W, Pisani A, Ajzenberg N, Timsit JF, Sonneville R
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Critical Care Explorations 2020, 2, e0239.

Chaudhuri D, Granton D, Wang DX, Einav S, Helviz Y, Mauri T, Ricard JD, Mancebo J, Frat JP, Jog S, Hernandez G, Maggiore SM, Hodgson C, Jaber S, Brochard L, Burns KEA, Rochwerg B
Moderate Certainty Evidence Suggests the Use of High-Flow Nasal Cannula Does Not Decrease Hypoxia When Compared With Conventional Oxygen Therapy in the Peri-Intubation Period: Results of a Systematic Review and Meta-Analysis.
Critical Care Medicine 2020

Buetti N, Ruckly S, Lucet JC, Perozziello A, Mimoz O, Souweine B, Timsit JF
The Insertion Site Should Be Considered for the Empirical Therapy of Short-Term Central Venous and Arterial Catheter-Related Infections.
Critical Care Medicine 2020, 48, 739-744.

Baudry G, Sonneville R, Waintraub X, Lebreton G, Deguillard C, Mertens E, Bouadma L, Demondion P, Bréchot N, Luyt CE, Extramiana F, Hékimian G, Dupuis C, Para M, Pisani A, Braham W, Gandjbakhch E, Leenhardt A, Timsit JF, Leprince P, Combes A, Schmidt M
Extracorporeal Membrane Oxygenation to Support Life-Threatening Drug-Refractory Electrical Storm.
Critical Care Medicine 2020, 48, e856-e863.

Granton D, Chaudhuri D, Wang D, Einav S, Helviz Y, Mauri T, Mancebo J, Frat JP, Jog S, Hernandez G, Maggiore SM, Hodgson CL, Jaber S, Brochard L, Trivedi V, Ricard JD, Goligher EC, Burns KEA, Rochwerg B
High-Flow Nasal Cannula Compared With Conventional Oxygen Therapy or Noninvasive Ventilation Immediately Postextubation: A Systematic Review and Meta-Analysis.
Critical Care Medicine 2020, 48, e1129-e1136.

Dong Y, Basmaci R, Titomanlio L, Sun B, Mercier JC
Neonatal sepsis: within and beyond China.
Chinese Medical Journal 2020, 133, 2219-2228.

Cohen R, Madhi F, Levy C, Bonacorsi S
Treatment of Urinary Tract Infections Caused By ESBL-Producing Enterobacteriaceae: Have All Treatment Options Been Considered?.
The Pediatric Infectious Disease Journal 2020, 39, e216-e217.

Vazouras K, Hsia Y, Folgori L, Bielicki J, Aguadisch E, Bamford A, Brett A, Caseris M, Cerkauskiene R, De Luca M, Iosifidis E, Kopsidas J, Manzanares Á, Planche T, Riordan A, Srovin TP, Valdivielso Martínez AI, Vergadi E, Sharland M, Basmaci R
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The Pediatric Infectious Disease Journal 2020

Levy C, Basmaci R, Bensaid P, Bru CB, Coinde E, Dessioux E, Fournial C, Gashignard J, Haas H, Hentgen V, Huet F, Lalande M, Martinot A, Pons C, Romain AS, Ursulescu N, Le Sage FV, Raymond J, Béchet S, Toubiana J, Cohen R
Changes in Reverse Transcription Polymerase Chain Reaction-positive Severe Acute Respiratory Syndrome Coronavirus 2 Rates in Adults and Children According to the Epidemic Stages.
The Pediatric Infectious Disease Journal 2020, 39, e369-e372.

Buetti N, Tabah A, Timsit JF, Zingg W
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Current Opinion in Critical Care 2020, 26, 459-465.

Mossoro-Kpinde CD, Gody JC, Mboumba Bouassa RS, Moussa S, Jenabian MA, Péré H, Charpentier C, Matta M, Longo JDD, Grésenguet G, Djoba Siawaya JF, Bélec L
Escalating and sustained immunovirological dissociation among antiretroviral drug-experienced perinatally human immunodeficiency virus-1-infected children and adolescents living in the Central African Republic: A STROBE-compliant study.
Medicine 2020, 99, e19978.

Journeau L, de la Chapelle M, Guimard T, Ferfar Y, Saadoun D, Mahé I, Castier Y, Montravers P, Lescure X, Van Gysel D, Asseray N, Lascarrou JB, Ngohou C, Vandamme YM, Connault J, Cepoy PDd, Brochard J, Goueffic Y, Pistorius MA, Boutoille D, Espitia O
A strobe multicenter descriptive study of 55 infectious aortitis.
Medicine 2020, 99, e22422.

Delannoy Q, Pean-de-Ponfilly G, Mesnil C, Severin C, Robert J, Plaisance P, Freund Y, Hausfater P, Cambau E, Jacquier H, Chauvin A
Validation of the Bacterial Meningitis Score in adults consulting at an emergency department: a retrospective multicentric study..
European journal of emergency medicine : official journal of the European Society for Emergency Medicine 2020, 27, 447-453.

Pencolé L, Lê MP, Bouchet-Crivat F, Duro D, Peytavin G, Mandelbrot L
Placental transfer of the integrase strand inhibitors cabotegravir and bictegravir in the ex-vivo human cotyledon perfusion model.
AIDS (London, England) 2020, 34, 2145-2149.

Patrier J, Timsit JF
Carbapenem use in critically ill patients.
Current Opinion in Infectious Diseases 2020, 33, 86-91.

Barbier F, Timsit JF
Risk stratification for multidrug-resistant bacteria in patients with skin and soft tissue infection.
Current Opinion in Infectious Diseases 2020, 33, 137-145.

Le Fevre L, Timsit JF
Duration of antimicrobial therapy for Gram-negative infections.
Current Opinion in Infectious Diseases 2020, 33, 511-516.

Rodrigues C, d'Humières C, Papin G, Passet V, Ruppé E, Brisse S
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Microbial Genomics 2020

Gloaguen E, Dizier MH, Boissel M, Rocheleau G, Canouil M, Froguel P, Tichet J, Roussel R, D.E.S.I.R. Study Group, Julier C, Balkau B, Mathieu F
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Annals of Human Genetics 2020, 84, 280-290.

Bruchet N, Gaschignard J, Timsit S, Chéron G
Risk of recurrence in children with a urinary tract infection due to extended-spectrum beta-lactamase-producing Enterobacteriaceae..
Acta paediatrica (Oslo, Norway : 1992) 2020, 109, 2808-2809.

Néant N, Lê MP, Bouazza N, Gattacceca F, Yazdanpanah Y, Dhiver C, Bregigeon S, Mokhtari S, Peytavin G, Tamalet C, Descamps D, Lacarelle B, Solas C
Usefulness of therapeutic drug monitoring of rilpivirine and its relationship with virologic response and resistance in a cohort of naive and pretreated HIV-infected patients.
British Journal of Clinical Pharmacology 2020, 86, 2404-2413.

Dupin C, Belhadi D, Guilleminault L, Gamez AS, Berger P, De Blay F, Bonniaud P, Leroyer C, Mahay G, Girodet PO, Raherison C, Fry S, Le Bourdellès G, Proust A, Rosencher L, Garcia G, Bourdin A, Chenivesse C, Didier A, Couffignal C, Taillé C
Effectiveness and safety of dupilumab for the treatment of severe asthma in a real-life French multi-centre adult cohort.
Clinical and Experimental Allergy: Journal of the British Society for Allergy and Clinical Immunology 2020, 50, 789-798.

Marin J, Achaz G, Crombach A, Lambert A
The genomic view of diversification..
Journal of evolutionary biology 2020, 33, 1387-1404.

Cohen Aubart F, Lhote R, Amoura A, Valeyre D, Haroche J, Amoura Z, Lebrun-Vignes B
Drug-induced sarcoidosis: an overview of the WHO pharmacovigilance database.
Journal of Internal Medicine 2020, 288, 356-362.

Hatzakis A, Lazarus JV, Cholongitas E, Baptista-Leite R, Boucher C, Busoi CS, Deuffic-Burban S, Chhatwal J, Esmat G, Hutchinson S, Malliori MM, Maticic M, Mozalevskis A, Negro F, Papandreou GA, Papatheodoridis GV, Peck-Radosavljevic M, Razavi H, Reic T, Schatz E, Tozun N, Younossi Z, Manns MP
Securing sustainable funding for viral hepatitis elimination plans.
Liver International: Official Journal of the International Association for the Study of the Liver 2020, 40, 260-270.

Gits-Muselli M, Villiers S, Hamane S, Berçot B, Donay JL, Denis B, Guigue N, Alanio A, Bretagne S
Time to and differential time to blood culture positivity for assessing catheter-related yeast fungaemia: A longitudinal, 7-year study in a single university hospital.
Mycoses 2020, 63, 95-103.

Timsit JF, Leverger G, Milpied N, Gachot B
Treatment of invasive fungal infections in intensive care units with micafungin: The MYRIADE study.
Mycoses 2020, 63, 443-451.

Lafont E, Roux O, de Lastours V, Dokmak S, Leflon V, Fantin B, Lefort A
Pyogenic liver abscess in liver transplant recipient: A warning signal for the risk of recurrence and retransplantation.
Transplant Infectious Disease: An Official Journal of the Transplantation Society 2020, 22, e13360.

Tiberghien P, de Lamballerie X, Morel P, Gallian P, Lacombe K, Yazdanpanah Y
Collecting and evaluating convalescent plasma for COVID-19 treatment: why and how?.
Vox Sanguinis 2020, 115, 488-494.

Parize P, Travecedo Robledo IC, Cervantes-Gonzalez M, Kergoat L, Larrous F, Serra-Cobo J, Dacheux L, Bourhy H
Circumstances of Human-Bat interactions and risk of lyssavirus transmission in metropolitan France.
Zoonoses and Public Health 2020, 67, 774-784.

Amor DR, Ratzke C, Gore J
Transient invaders can induce shifts between alternative stable states of microbial communities.
Science Advances 2020, 6, eaay8676.

Kemble H, Eisenhauer C, Couce A, Chapron A, Magnan M, Gautier G, Le Nagard H, Nghe P, Tenaillon O
Flux, toxicity, and expression costs generate complex genetic interactions in a metabolic pathway.
Science Advances 2020, 6, eabb2236.

Hadjadj J, Yatim N, Barnabei L, Corneau A, Boussier J, Smith N, Péré H, Charbit B, Bondet V, Chenevier-Gobeaux C, Breillat P, Carlier N, Gauzit R, Morbieu C, Pène F, Marin N, Roche N, Szwebel TA, Merkling SH, Treluyer JM, Veyer D, Mouthon L, Blanc C, Tharaux PL, Rozenberg F, Fischer A, Duffy D, Rieux-Laucat F, Kernéis S, Terrier B
Impaired type I interferon activity and inflammatory responses in severe COVID-19 patients.
Science (New York, N.Y.) 2020, 369, 718-724.

Zhang Q, Bastard P, Liu Z, Le Pen J, Moncada-Velez M, Chen J, Ogishi M, Sabli IKD, Hodeib S, Korol C, Rosain J, Bilguvar K, Ye J, Bolze A, Bigio B, Yang R, Arias AA, Zhou Q, Zhang Y, Onodi F, Korniotis S, Karpf L, Philippot Q, Chbihi M, Bonnet-Madin L, Dorgham K, Smith N, Schneider WM, Razooky BS, Hoffmann HH, Michailidis E, Moens L, Han JE, Lorenzo L, Bizien L, Meade P, Neehus AL, Ugurbil AC, Corneau A, Kerner G, Zhang P, Rapaport F, Seeleuthner Y, Manry J, Masson C, Schmitt Y, Schlüter A, Le Voyer T, Khan T, Li J, Fellay J, Roussel L, Shahrooei M, Alosaimi MF, Mansouri D, Al-Saud H, Al-Mulla F, Almourfi F, Al-Muhsen SZ, Alsohime F, Al Turki S, Hasanato R, van de Beek D, Biondi A, Bettini LR, D'Angio' M, Bonfanti P, Imberti L, Sottini A, Paghera S, Quiros-Roldan E, Rossi C, Oler AJ, Tompkins MF, Alba C, Vandernoot I, Goffard JC, Smits G, Migeotte I, Haerynck F, Soler-Palacin P, Martin-Nalda A, Colobran R, Morange PE, Keles S, Çölkesen F, Ozcelik T, Yasar KK, Senoglu S, Karabela ŞN, Rodríguez-Gallego C, Novelli G, Hraiech S, Tandjaoui-Lambiotte Y, Duval X, Laouénan C, COVID-STORM Clinicians, COVID Clinicians, Imagine COVID Group, French COVID Cohort Study Group, CoV-Contact Cohort, Amsterdam UMC Covid-19 Biobank, COVID Human Genetic Effort, NIAID-USUHS/TAGC COVID Immunity Group, Snow AL, Dalgard CL, Milner JD, Vinh DC, Mogensen TH, Marr N, Spaan AN, Boisson B, Boisson-Dupuis S, Bustamante J, Puel A, Ciancanelli MJ, Meyts I, Maniatis T, Soumelis V, Amara A, Nussenzweig M, García-Sastre A, Krammer F, Pujol A, Duffy D, Lifton RP, Zhang SY, Gorochov G, Béziat V, Jouanguy E, Sancho-Shimizu V, Rice CM, Abel L, Notarangelo LD, Cobat A, Su HC, Casanova JL
Inborn errors of type I IFN immunity in patients with life-threatening COVID-19.
Science (New York, N.Y.) 2020, 370,

Bastard P, Rosen LB, Zhang Q, Michailidis E, Hoffmann HH, Zhang Y, Dorgham K, Philippot Q, Rosain J, Béziat V, Manry J, Shaw E, Haljasmägi L, Peterson P, Lorenzo L, Bizien L, Trouillet-Assant S, Dobbs K, de Jesus AA, Belot A, Kallaste A, Catherinot E, Tandjaoui-Lambiotte Y, Le Pen J, Kerner G, Bigio B, Seeleuthner Y, Yang R, Bolze A, Spaan AN, Delmonte OM, Abers MS, Aiuti A, Casari G, Lampasona V, Piemonti L, Ciceri F, Bilguvar K, Lifton RP, Vasse M, Smadja DM, Migaud M, Hadjadj J, Terrier B, Duffy D, Quintana-Murci L, van de Beek D, Roussel L, Vinh DC, Tangye SG, Haerynck F, Dalmau D, Martinez-Picado J, Brodin P, Nussenzweig MC, Boisson-Dupuis S, Rodríguez-Gallego C, Vogt G, Mogensen TH, Oler AJ, Gu J, Burbelo PD, Cohen JI, Biondi A, Bettini LR, D'Angio M, Bonfanti P, Rossignol P, Mayaux J, Rieux-Laucat F, Husebye ES, Fusco F, Ursini MV, Imberti L, Sottini A, Paghera S, Quiros-Roldan E, Rossi C, Castagnoli R, Montagna D, Licari A, Marseglia GL, Duval X, Ghosn J, HGID Lab, NIAID-USUHS Immune Response to COVID Group, COVID Clinicians, COVID-STORM Clinicians, Imagine COVID Group, French COVID Cohort Study Group, Milieu Intérieur Consortium, CoV-Contact Cohort, Amsterdam UMC Covid-19 Biobank, COVID Human Genetic Effort, Tsang JS, Goldbach-Mansky R, Kisand K, Lionakis MS, Puel A, Zhang SY, Holland SM, Gorochov G, Jouanguy E, Rice CM, Cobat A, Notarangelo LD, Abel L, Su HC, Casanova JL
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Grzelak L, Temmam S, Planchais C, Demeret C, Tondeur L, Huon C, Guivel-Benhassine F, Staropoli I, Chazal M, Dufloo J, Planas D, Buchrieser J, Rajah MM, Robinot R, Porrot F, Albert M, Chen KY, Crescenzo-Chaigne B, Donati F, Anna F, Souque P, Gransagne M, Bellalou J, Nowakowski M, Backovic M, Bouadma L, Le Fevre L, Le Hingrat Q, Descamps D, Pourbaix A, Laouénan C, Ghosn J, Yazdanpanah Y, Besombes C, Jolly N, Pellerin-Fernandes S, Cheny O, Ungeheuer MN, Mellon G, Morel P, Rolland S, Rey FA, Behillil S, Enouf V, Lemaitre A, Créach MA, Petres S, Escriou N, Charneau P, Fontanet A, Hoen B, Bruel T, Eloit M, Mouquet H, Schwartz O, van der Werf S
A comparison of four serological assays for detecting anti-SARS-CoV-2 antibodies in human serum samples from different populations.
Science Translational Medicine 2020, 12,

Zheng Y, Hirt D, Delmas S, Lui G, Benaboud S, Lechedanec J, Tréluyer JM, Chenevier-Gobeaux C, Arezes E, Gelley A, Amri I, Urien S, Bouazza N, Foissac F, Warszawski J, Ghosn J
Effect of Pregnancy on Unbound Raltegravir Concentrations in the ANRS 160 RalFe Trial.
Antimicrobial Agents and Chemotherapy 2020, 64, e00759-20.

Roujansky A, de Lastours V, Guérin F, Chau F, Cheminet G, Massias L, Cattoir V, Fantin B
Analysis of Paradoxical Efficacy of Carbapenems against Carbapenemase-Producing Escherichia coli in a Murine Model of Lethal Peritonitis.
Antimicrobial Agents and Chemotherapy 2020, 64,

Gelé T, Gouget H, Furlan V, Becker PH, Taburet AM, Lambotte O, Barrail-Tran A
Characteristics of Dolutegravir and Bictegravir Plasma Protein Binding: a First Approach for the Study of Pharmacologic Sanctuaries.
Antimicrobial Agents and Chemotherapy 2020, 64, e00895-20.

Hobson CA, Bonacorsi S, Jacquier H, Choudhury A, Magnan M, Cointe A, Bercot B, Tenaillon O, Birgy A
KPC Beta-Lactamases Are Permissive to Insertions and Deletions Conferring Substrate Spectrum Modifications and Resistance to Ceftazidime-Avibactam.
Antimicrobial Agents and Chemotherapy 2020, 64, e01175-20.

Harris HC, Best EL, Normington C, Saint-Lu N, Sablier-Gallis F, de Gunzburg J, Andremont A, Wilcox MH, Chilton CH
Optimization of an Assay To Determine Colonization Resistance to Clostridioides difficile in Fecal Samples from Healthy Subjects and Those Treated with Antibiotics.
Antimicrobial Agents and Chemotherapy 2020, 65,

Lê MP, Le Hingrat Q, Jaquet P, Wicky PH, Bunel V, Massias L, Visseaux B, Messika J, Descamps D, Mal H, Timsit JF, Peytavin G
Removal of Remdesivir's Metabolite GS-441524 by Hemodialysis in a Double Lung Transplant Recipient with COVID-19.
Antimicrobial Agents and Chemotherapy 2020, 64,

Bailly S, Gautier-Veyret E, Lê MP, Bouadma L, Andremont O, Neuville M, Mourvillier B, Sonneville R, Magalhaes E, Lebut J, Radjou A, Smonig R, Wolff M, Massias L, Dupuis C, Timsit JF
Impact of Loading Dose of Caspofungin in Pharmacokinetic-Pharmacodynamic Target Attainment for Severe Candidiasis Infections in Patients in Intensive Care Units: the CASPOLOAD Study.
Antimicrobial Agents and Chemotherapy 2020, 64, e01545-20.

Lê MP, Le Beller C, Le Hingrat Q, Jaquet P, Wicky PH, Bunel V, Massias L, Visseaux B, Messika J, Descamps D, Mal H, Timsit JF, Peytavin G
Reply to Yan and Muller, "Captisol and GS-704277, but Not GS-441524, Are Credible Mediators of Remdesivir's Nephrotoxicity".
Antimicrobial Agents and Chemotherapy 2020, 64,

Tornyigah B, Coppée R, Houze P, Kusi KA, Adu B, Quakyi I, Coleman N, Mama A, Deloron P, Anang AK, Clain J, Tahar R, Ofori MF, Tuikue Ndam N
Effect of Drug Pressure on Promoting the Emergence of Antimalarial-Resistant Parasites among Pregnant Women in Ghana.
Antimicrobial Agents and Chemotherapy 2020, 64, e02029-19.

Mercier-Darty M, Royer G, Lamy B, Charron C, Lemenand O, Gomart C, Fourreau F, Madec JY, Jumas-Bilak E, Decousser JW
Comparative Whole-Genome Phylogeny of Animal, Environmental, and Human Strains Confirms the Genogroup Organization and Diversity of the Stenotrophomonas maltophilia Complex.
Applied and Environmental Microbiology 2020, 86,

Duprilot M, Baron A, Blanquart F, Dion S, Pouget C, Lettéron P, Flament-Simon SC, Clermont O, Denamur E, Nicolas-Chanoine MH
Success of Escherichia coli O25b:H4 Sequence Type 131 Clade C Associated with a Decrease in Virulence.
Infection and Immunity 2020, 88, e00576-20.

Visseaux B, Le Hingrat Q, Collin G, Bouzid D, Lebourgeois S, Le Pluart D, Deconinck L, Lescure FX, Lucet JC, Bouadma L, Timsit JF, Descamps D, Yazdanpanah Y, Casalino E, Houhou-Fidouh N, McAdam AJ
Evaluation of the QIAstat-Dx Respiratory SARS-CoV-2 Panel, the First Rapid Multiplex PCR Commercial Assay for SARS-CoV-2 Detection.
Journal of Clinical Microbiology 2020, 58, e00630-20, /jcm/58/8/JCM.00630-20.atom.

Petit M, Caméléna F, Cointe A, Poncin T, Merimèche M, Bonacorsi S, Birgy A, Berçot B
Rapid Detection and Characterization of Carbapenemases in Enterobacterales with a New Modified Carbapenem Inactivation Method, mCIMplus.
Journal of Clinical Microbiology 2020, 58, e01370-20.

Le Hingrat Q, Visseaux B, Bertine M, Chauveau L, Schwartz O, Collin F, Damond F, Matheron S, Descamps D, Charpentier C
Genetic Variability of Long Terminal Repeat Region between HIV-2 Groups Impacts Transcriptional Activity.
Journal of Virology 2020, 94,

Langevin AM, El Meouche I, Dunlop MJ
Mapping the Role of AcrAB-TolC Efflux Pumps in the Evolution of Antibiotic Resistance Reveals Near-MIC Treatments Facilitate Resistance Acquisition.
mSphere 2020

Chen C, Choudhury A, Zhang S, Garst AD, Song X, Liu X, Chen T, Gill RT, Wang Z
Integrating CRISPR-Enabled Trackable Genome Engineering and Transcriptomic Analysis of Global Regulators for Antibiotic Resistance Selection and Identification in Escherichia coli.
mSystems 2020, 5, e00232-20.

Herrou J, De Lastours V
Predictive factors of pneumocystis pneumonia in patients with rheumatic diseases exposed to prolonged high-dose glucocorticoids.
Annals of the Rheumatic Diseases 2020, 79, e23.

Pouletty M, Borocco C, Ouldali N, Caseris M, Basmaci R, Lachaume N, Bensaid P, Pichard S, Kouider H, Morelle G, Craiu I, Pondarre C, Deho A, Maroni A, Oualha M, Amoura Z, Haroche J, Chommeloux J, Bajolle F, Beyler C, Bonacorsi S, Carcelain G, Koné-Paut I, Bader-Meunier B, Faye A, Meinzer U, Galeotti C, Melki I
Paediatric multisystem inflammatory syndrome temporally associated with SARS-CoV-2 mimicking Kawasaki disease (Kawa-COVID-19): a multicentre cohort.
Annals of the Rheumatic Diseases 2020, 79, 999-1006.

Ouldali N, Pouletty M, Lokmer J, Benzouid C, Beyler C, Deho A, Meinzer U, Faye A, Melki I, Great Paris Region (GPR) Kawa-COVID-19 consortium
Response to: 'Correspondence on 'Paediatric multisystem inflammatory syndrome temporally associated with SARS-CoV-2 mimicking Kawasaki disease (Kawa-COVID-19): a multicentre cohort' by Pouletty et al' by Pino et al.
Annals of the Rheumatic Diseases 2020, annrheumdis-2020-218614.

Pouletty M, Dingulu G, Ouldali N, Corseri O, Ducrocq C, Meinzer U, Faye A, Galeotti C, Melki I, GPR(KC1c
Response to: 'Exaggerated neutrophil extracellular trap formation in Kawasaki disease: a key phenomenon behind the outbreak in western countries?' by Yamashita et al.
Annals of the Rheumatic Diseases 2020

Pouletty M, Dingulu G, Ouldali N, Corseri O, Ducrocq C, Meinzer U, Faye A, Galeotti C, Melki I, Great Paris Region (GPR) Kawa-COVID-19 consortium
Response to: 'Exaggerated neutrophil extracellular trap formation in Kawasaki disease: a key phenomenon behind the outbreak in western countries?' by Yamashita et al.
Annals of the Rheumatic Diseases 2020, annrheumdis-2020-218644.

Ploton MC, Sommet J, Koehl B, Gaschignard J, Holvoet L, Mariani-Kurkdjian P, Benkerrou M, Le Roux E, Bonacorsi S, Faye A
Respiratory pathogens and acute chest syndrome in children with sickle cell disease.
Archives of Disease in Childhood 2020, 105, 891-895.

Federici L, Picone O, Dreyfuss D, Sibiude J
Successful continuation of pregnancy in a patient with COVID-19-related ARDS.
BMJ case reports 2020, 13,

Mahévas M, Tran VT, Roumier M, Chabrol A, Paule R, Guillaud C, Fois E, Lepeule R, Szwebel TA, Lescure FX, Schlemmer F, Matignon M, Khellaf M, Crickx E, Terrier B, Morbieu C, Legendre P, Dang J, Schoindre Y, Pawlotsky JM, Michel M, Perrodeau E, Carlier N, Roche N, de Lastours V, Ourghanlian C, Kerneis S, Ménager P, Mouthon L, Audureau E, Ravaud P, Godeau B, Gallien S, Costedoat-Chalumeau N
Clinical efficacy of hydroxychloroquine in patients with covid-19 pneumonia who require oxygen: observational comparative study using routine care data.
BMJ 2020, m1844.

Toubiana J, Poirault C, Corsia A, Bajolle F, Fourgeaud J, Angoulvant F, Debray A, Basmaci R, Salvador E, Biscardi S, Frange P, Chalumeau M, Casanova JL, Cohen JF, Allali S
Kawasaki-like multisystem inflammatory syndrome in children during the covid-19 pandemic in Paris, France: prospective observational study.
BMJ (Clinical research ed.) 2020, 369, m2094.

Lemaignen A, Bernard L, Tattevin P, Bru JP, Duval X, Hoen B, Brunet-Houdard S, Mainardi JL, Caille A, RODEO (Relais Oral Dans le traitement des Endocardites à staphylocoques ou streptOcoques) and AEPEI (Association pour l’Etude et la Prévention de l’Endocardite Infectieuse) study groups
Oral switch versus standard intravenous antibiotic therapy in left-sided endocarditis due to susceptible staphylococci, streptococci or enterococci (RODEO): a protocol for two open-label randomised controlled trials.
BMJ open 2020, 10, e033540.

Ader F, Discovery French Trial Management Team
Protocol for the DisCoVeRy trial: multicentre, adaptive, randomised trial of the safety and efficacy of treatments for COVID-19 in hospitalised adults.
BMJ open 2020, 10, e041437.

Cohen R, Jung C, Ouldali N, Sellam A, Batard C, Cahn-Sellem F, Elbez A, Wollner A, Romain O, Corrard F, Aberrane S, Soismier N, Creidy R, Smati-Lafarge M, Launay O, Béchet S, Varon E, Levy C
Assessment of SARS-CoV-2 infection by Reverse transcription-PCR and serology in the Paris area: a cross-sectional study.
BMJ paediatrics open 2020, 4, e000887.

Chauvin A, Javaud N, Ghazali A, Curac S, Altar A, Ali T, Beguin N, Bellier J, Coupier A, Delsarte L, Dreyfuss D, Kheirbek N, Oudar C, Stordeur Y, Weiss M, Gaudry S, Lambert J, Roux D
Reducing pain by using venous blood gas instead of arterial blood gas (VEINART): a multicentre randomised controlled trial.
Emergency medicine journal: EMJ 2020, 37, 756-761.

Castry M, Cousien A, Supervie V, Velter A, Ghosn J, Paltiel AD, Yazdanpanah Y, Deuffic-Burban S
Impact of test-and-treat and risk reduction strategies on HCV transmission among MSM living with HIV in France: a modelling approach.
Gut 2020

Jacquier H, Miltgen G, Hoarau D, Kumanski S, Rollot O, Bruniquet S, Ndeikoundam N, Li Pat-Yuen G, Belmonte O, Bercot B, Roquebert B
Molecular epidemiology of Neisseria gonorrhoeae clinical isolates in Reunion and Mayotte.
Sexually Transmitted Infections 2020, 96, 478-479.

Bruno R, Bottino D, de Alwis DP, Fojo AT, Guedj J, Liu C, Swanson KR, Zheng J, Zheng Y, Jin JY
Progress and Opportunities to Advance Clinical Cancer Therapeutics Using Tumor Dynamic Models.
Clinical Cancer Research: An Official Journal of the American Association for Cancer Research 2020, 26, 1787-1795.

Pechmajou L, Marijon E, Varenne O, Dumas F, Beganton F, Jost D, Lamhaut L, Lecarpentier E, Loeb T, Agostinucci JM, Sideris G, Riant E, Baudinaud P, Hagege A, Bougouin W, Spaulding C, Cariou A, Jouven X, Karam N, Paris-Sudden Death Expertise Center Investigators†
Impact of Coronary Lesion Stability on the Benefit of Emergent Percutaneous Coronary Intervention After Sudden Cardiac Arrest.
Circulation. Cardiovascular Interventions 2020, 13, e009181.

Seurat J, Nguyen TT, Mentré F
Robust designs accounting for model uncertainty in longitudinal studies with binary outcomes.
Statistical Methods in Medical Research 2020, 29, 934-952.

Dodd LE, Follmann D, Wang J, Koenig F, Korn LL, Schoergenhofer C, Proschan M, Hunsberger S, Bonnett T, Makowski M, Belhadi D, Wang Y, Cao B, Mentre F, Jaki T
Endpoints for randomized controlled clinical trials for COVID-19 treatments.
Clinical Trials (London, England) 2020, 17, 472-482.

Payen M, Nicolis I, Robin M, Michonneau D, Delannoye J, Mayeur C, Kapel N, Berçot B, Butel MJ, Le Goff J, Socié G, Rousseau C
Functional and phylogenetic alterations in gut microbiome are linked to graft-versus-host disease severity.
Blood Advances 2020, 4, 1824-1832.

Daley CL, Iaccarino JM, Lange C, Cambau E, Wallace RJJ, Andrejak C, Böttger EC, Brozek J, Griffith DE, Guglielmetti L, Huitt GA, Knight SL, Leitman P, Marras TK, Olivier KN, Santin M, Stout JE, Tortoli E, van Ingen J, Wagner D, Winthrop KL
Treatment of nontuberculous mycobacterial pulmonary disease: an official ATS/ERS/ESCMID/IDSA clinical practice guideline..
The European respiratory journal 2020, 56,

Ong CWM, Migliori GB, Raviglione M, MacGregor-Skinner G, Sotgiu G, Alffenaar JW, Tiberi S, Adlhoch C, Alonzi T, Archuleta S, Brusin S, Cambau E, Capobianchi MR, Castilletti C, Centis R, Cirillo DM, D'Ambrosio L, Delogu G, Esposito SMR, Figueroa J, Friedland JS, Ho BCH, Ippolito G, Jankovic M, Kim HY, Rosales Klintz S, Ködmön C, Lalle E, Leo YS, Leung CC, Märtson AG, Melazzini MG, Najafi Fard S, Penttinen P, Petrone L, Petruccioli E, Pontali E, Saderi L, Santin M, Spanevello A, van Crevel R, van der Werf MJ, Visca D, Viveiros M, Zellweger JP, Zumla A, Goletti D
Epidemic and pandemic viral infections: impact on tuberculosis and the lung: A consensus by the World Association for Infectious Diseases and Immunological Disorders (WAidid), Global Tuberculosis Network (GTN), and members of the European Society of Clinical Microbiology and Infectious Diseases Study Group for Mycobacterial Infections (ESGMYC).
The European Respiratory Journal 2020, 56,

Frija-Masson J, Debray MP, Gilbert M, Lescure FX, Travert F, Borie R, Khalil A, Crestani B, d'Ortho MP, Bancal C
Functional characteristics of patients with SARS-CoV-2 pneumonia at 30 days post infection.
European Respiratory Journal 2020, 2001754.

Le Hingrat Q, Ghanem M, Cazes A, Visseaux B, Collin G, Descamps D, Charpentier C, Crestani B
No association between human herpesvirus or herpesvirus saimiri and idiopathic pulmonary fibrosis.
ERJ Open Research 2020, 6, 00243-2020.

Lomont A, Boubaya M, Khamis W, Deslandes A, Cordel H, Seytre D, Alloui C, Malaure C, Bonnet N, Carbonnelle E, Cohen Y, Nunes H, Bouchaud O, Zahar JR, Tandjaoui-Lambiotte Y
Environmental contamination related to SARS-CoV-2 in ICU patients.
ERJ open research 2020

Refrégier G, Sola C, Guyeux C
Unexpected diversity of CRISPR unveils some evolutionary patterns of repeated sequences in Mycobacterium tuberculosis..
BMC genomics 2020, 21, 841.

Bouchaud O, Matheron S, Loarec A, Dupouy Camet J, Bourée P, Godineau N, Poilane I, Cailhol J, Caumes E
Imported loiasis in France: a retrospective analysis of 167 cases with comparison between sub-Saharan and non sub-Saharan African patients.
BMC infectious diseases 2020, 20, 63.

Billette de Villemeur A, Tattevin P, Salmi LR, French Haut Conseil de la santé publique Working Group
Hygiene promotion might be better than serological screening to deal with Cytomegalovirus infection during pregnancy: a methodological appraisal and decision analysis.
BMC infectious diseases 2020, 20, 418.

Izri A, Aljundi M, Billard-Pomares T, Fofana Y, Marteau A, Ferreira TG, Brun S, Caux F, Akhoundi M
Molecular identification of Actinomadura madurae isolated from a patient originally from Algeria; observations from a case report.
BMC infectious diseases 2020, 20, 829.

Ekouevi DK, Larrouy L, Gbeasor-Komlanvi FA, Mackiewicz V, Tchankoni MK, Bitty-Anderson AM, Gnatou GYS, Sadio A, Salou M, Dagnra CA, Descamps D, Coffie PA
Prevalence of hepatitis B among childbearing women and infant born to HBV-positive mothers in Togo.
BMC infectious diseases 2020, 20, 839.

Lafaurie M, d'Anglejan E, Donay JL, Glotz D, Sarfati E, Mimoun M, Legrand M, Oksenhendler E, Bagot M, Valade S, Bercot B, Molina JM
Utility of anaerobic bottles for the diagnosis of bloodstream infections.
BMC infectious diseases 2020, 20, 142.

Dubert M, Visseaux B, Birgy A, Mordant P, Metivier AC, Dauriat G, Fidouh N, Yazdanpanah Y, Grall N, Castier Y, Mal H, Thabut G, Lescure FX
Late viral or bacterial respiratory infections in lung transplanted patients: impact on respiratory function.
BMC infectious diseases 2020, 20, 176.

Grollemund B, Dissaux C, Gavelle P, Martínez CP, Mullaert J, Alfaiate T, Guedeney A, CLIP team (Cleft Lip & palate Infant Parent)
The impact of having a baby with cleft lip and palate on parents and on parent-baby relationship: the first French prospective multicentre study.
BMC pediatrics 2020, 20, 230.

Itodo OA, Viriot D, Velter A, Leon L, Dupin N, Bercot B, Goubard A, Lassau F, Fouere S, Martinet P, Tosini W, Florence S, Referents for the Regional Offices of the French National Public Health Agency (Santé Publique France), Lot F, Ndeikoundam Ngangro N
Trends and determinants of condomless sex in gonorrhoea patients diagnosed in France through the sentinel surveillance network ResIST, 2005-2014.
BMC public health 2020, 20, 1620.

Peyrony O, Hutin A, Truchot J, Borie R, Calvet D, Albaladejo A, Baadj Y, Cailleaux PE, Flamant M, Martin C, Messika J, Meunier A, Mirabel M, Tea V, Treton X, Chevret S, Lebeaux D, Roux D
Impact of panelists' experience on script concordance test scores of medical students.
BMC medical education 2020, 20, 313.

Clément A, Delage R, Chollier M, Josse L, Gaudry S, Zahar JR, Baubet T, Degos B
Prospective study on a fast-track training in psychiatry for medical students: the psychiatric hat game.
BMC medical education 2020, 20, 373.

Tabibzadeh N, Mullaert J, Zafrani L, Balagny P, Frija-Masson J, Marin S, Lefort A, Vidal-Petiot E, Flamant M
Knowledge self-monitoring, efficiency, and determinants of self-confidence statement in multiple choice questions in medical students.
BMC medical education 2020, 20, 445.

Norton A, Sigfrid L, Aderoba A, Nasir N, Bannister PG, Collinson S, Lee J, Boily-Larouche G, Golding JP, Depoortere E, Carson G, Kerstiëns B, Yazdanpanah Y
Preparing for a pandemic: highlighting themes for research funding and practice—perspectives from the Global Research Collaboration for Infectious Disease Preparedness (GloPID-R).
BMC Medicine 2020, 18, 273.

Mamez AC, Dupont A, Blaise D, Chevallier P, Forcade E, Ceballos P, Mohty M, Suarez F, Beguin Y, Peffault De Latour R, Rubio MT, Tournilhac O, Nguyen S
Allogeneic stem cell transplantation for peripheral T cell lymphomas: a retrospective study in 285 patients from the Société Francophone de Greffe de Moelle et de Thérapie Cellulaire (SFGM-TC).
Journal of Hematology & Oncology 2020, 13, 56.

Mirouse A, Parrot A, Audigier V, Demoule A, Mayaux J, Géri G, Mariotte E, Bréchot N, de Prost N, Vautier M, Neuville M, Bigé N, de Montmollin E, Cacoub P, Resche-Rigon M, Cadranel J, Saadoun D
Severe diffuse alveolar hemorrhage related to autoimmune disease: a multicenter study.
Critical Care 2020, 24, 231.

Peiffer-Smadja N, Bouadma L, Mathy V, Allouche K, Patrier J, Reboul M, Montravers P, Timsit JF, Armand-Lefevre L
Performance and impact of a multiplex PCR in ICU patients with ventilator-associated pneumonia or ventilated hospital-acquired pneumonia.
Critical Care (London, England) 2020, 24, 366.

Monard C, Pehlivan J, Auger G, Alviset S, Tran Dinh A, Duquaire P, Gastli N, d'Humières C, Maamar A, Boibieux A, Baldeyrou M, Loubinoux J, Dauwalder O, Cattoir V, Armand-Lefèvre L, Kernéis S, ADAPT study group
Multicenter evaluation of a syndromic rapid multiplex PCR test for early adaptation of antimicrobial therapy in adult patients with pneumonia.
Critical Care (London, England) 2020, 24, 434.

Buetti N, Ruckly S, Schwebel C, Mimoz O, Souweine B, Lucet JC, Timsit JF
Chlorhexidine-impregnated sponge versus chlorhexidine gel dressing for short-term intravascular catheters: which one is better?.
Critical Care (London, England) 2020, 24, 458.

Buetti N, Wicky PH, Le Hingrat Q, Ruckly S, Mazzuchelli T, Loiodice A, Trimboli P, Forni Ogna V, de Montmollin E, Bernasconi E, Visseaux B, Timsit JF
SARS-CoV-2 detection in the lower respiratory tract of invasively ventilated ARDS patients.
Critical Care (London, England) 2020, 24, 610.

Kalfon P, Boucekine M, Estagnasie P, Geantot MA, Berric A, Simon G, Floccard B, Signouret T, Fromentin M, Nyunga M, Audibert J, Ben Salah A, Mauchien B, Sossou A, Venot M, Robert R, Follin A, Renault A, Garrouste-Orgeas M, Collange O, Levrat Q, Villard I, Thevenin D, Pottecher J, Patrigeon RG, Revel N, Vigne C, Azoulay E, Mimoz O, Auquier P, Baumstarck K, IPREA Study Group
Risk factors and events in the adult intensive care unit associated with pain as self-reported at the end of the intensive care unit stay.
Critical Care (London, England) 2020, 24, 685.

Buetti N, Ruckly S, Lucet JC, Bouadma L, Garrouste-Orgeas M, Schwebel C, Mimoz O, Souweine B, Timsit JF
Local signs at insertion site and catheter-related bloodstream infections: an observational post hoc analysis using individual data of four RCTs.
Critical Care (London, England) 2020, 24, 694.

Contou D, Coudroy R, Colin G, Tadié JM, Cour M, Sonneville R, Mekontso Dessap A, de Prost N, HOPEFUL Study Group
Pneumococcal purpura fulminans in asplenic or hyposplenic patients: a French multicenter exposed-unexposed retrospective cohort study.
Critical Care (London, England) 2020, 24, 68.

Blet A, de Roquetaillade C, Hartmann O, Struck J, Mebazaa A, Chousterman BG, Adrenoss-1 study investigators
Added value of serial bio-adrenomedullin measurement in addition to lactate for the prognosis of septic patients admitted to ICU.
Critical Care (London, England) 2020, 24, 69.

Madotto F, Rezoagli E, Pham T, Schmidt M, McNicholas B, Protti A, Panwar R, Bellani G, Fan E, van Haren F, Brochard L, Laffey JG, LUNG SAFE Investigators and the ESICM Trials Group
Hyperoxemia and excess oxygen use in early acute respiratory distress syndrome: insights from the LUNG SAFE study.
Critical Care (London, England) 2020, 24, 125.

Duvignaud A, Lhomme E, Pistone T, Onaisi R, Sitta R, Journot V, Nguyen D, Peiffer-Smadja N, Crémer A, Bouchet S, Darnaud T, Poitrenaud D, Piroth L, Binquet C, Michel JF, Lefèvre B, Lebeaux D, Lebel J, Dupouy J, Roussillon C, Gimbert A, Wittkop L, Thiébaut R, Orne-Gliemann J, Joseph JP, Richert L, Anglaret X, Malvy D, COVERAGE study group
Home Treatment of Older People with Symptomatic SARS-CoV-2 Infection (COVID-19): A structured Summary of a Study Protocol for a Multi-Arm Multi-Stage (MAMS) Randomized Trial to Evaluate the Efficacy and Tolerability of Several Experimental Treatments to Reduce the Risk of Hospitalisation or Death in outpatients aged 65 years or older (COVERAGE trial).
Trials 2020, 21, 846.

Vinclair C, De Montmollin E, Sonneville R, Reuter J, Lebut J, Cally R, Mourvillier B, Neuville M, Ruckly S, Timsit JF, Bouadma L
Factors associated with major adverse kidney events in patients who underwent veno-arterial extracorporeal membrane oxygenation.
Annals of Intensive Care 2020, 10, 44.

OUTCOMEREA Study Group, de Montmollin E, Terzi N, Dupuis C, Garrouste-Orgeas M, da Silva D, Darmon M, Laurent V, Thiéry G, Oziel J, Marcotte G, Gainnier M, Siami S, Sztrymf B, Adrie C, Reignier J, Ruckly S, Sonneville R, Timsit JF
One-year survival in acute stroke patients requiring mechanical ventilation: a multicenter cohort study.
Annals of Intensive Care 2020, 10, 53.

Logre E, Enser M, Tanaka S, Dubert M, Claudinon A, Grall N, Mentec H, Montravers P, Pajot O
Amikacin pharmacokinetic/pharmacodynamic in intensive care unit: a prospective database.
Annals of Intensive Care 2020, 10, 75.

Grimaud M, Starck J, Levy M, Marais C, Chareyre J, Khraiche D, Leruez-Ville M, Quartier P, Léger PL, Geslain G, Semaan N, Moulin F, Bendavid M, Jean S, Poncelet G, Renolleau S, Oualha M
Acute myocarditis and multisystem inflammatory emerging disease following SARS-CoV-2 infection in critically ill children..
Annals of intensive care 2020, 10, 69.

Buetti N, Ruckly S, Lucet JC, Bouadma L, Schwebel C, Mimoz O, Timsit JF
Ultrasound guidance and risk for intravascular catheter-related infections among peripheral arterial catheters: a post-hoc analysis of two large randomized-controlled trials.
Annals of Intensive Care 2020, 10, 89.

Timsit JF, Baleine J, Bernard L, Calvino-Gunther S, Darmon M, Dellamonica J, Desruennes E, Leone M, Lepape A, Leroy O, Lucet JC, Merchaoui Z, Mimoz O, Misset B, Parienti JJ, Quenot JP, Roch A, Schmidt M, Slama M, Souweine B, Zahar JR, Zingg W, Bodet-Contentin L, Maxime V
Expert consensus-based clinical practice guidelines management of intravascular catheters in the intensive care unit.
Annals of Intensive Care 2020, 10, 118.

Elabbadi A, Pichon J, Visseaux B, Schnuriger A, Bouadma L, Philippot Q, Patrier J, Labbé V, Ruckly S, Fartoukh M, Timsit JF, Voiriot G
Respiratory virus-associated infections in HIV-infected adults admitted to the intensive care unit for acute respiratory failure: a 6-year bicenter retrospective study (HIV-VIR study).
Annals of Intensive Care 2020, 10, 123.

Manquat E, Le Dorze M, Pean De Ponfilly G, Benmansour H, Amarsy R, Cambau E, Soyer B, Chousterman BG, Jacquier H
Impact of systematic screening for AmpC-hyperproducing Enterobacterales intestinal carriage in intensive care unit patients.
Annals of Intensive Care 2020, 10, 149.

Dupuis C, Bouadma L, Ruckly S, Perozziello A, Van-Gysel D, Mageau A, Mourvillier B, de Montmollin E, Bailly S, Papin G, Sinnah F, Vinclair C, Abid S, Sonneville R, Timsit JF
Sepsis and septic shock in France: incidences, outcomes and costs of care.
Annals of Intensive Care 2020, 10, 145.

Sonneville R, Smonig R, Dupuis C, Bouadma L, de Montmollin E, Timsit JF
Natural light exposure and delirium in ICU: does the dark side cloud everything?.
Annals of Intensive Care 2020, 10, 25.

Goulas A, Belhadi D, Descamps A, Andremont A, Benoit P, Courtois S, Dagot C, Grall N, Makowski D, Nazaret S, Nelieu S, Patureau D, Petit F, Roose-Amsaleg C, Vittecoq M, Livoreil B, Laouenan C
How effective are strategies to control the dissemination of antibiotic resistance in the environment? A systematic review.
Environmental Evidence 2020, 9, 4.

Kardaś-Słoma L, Yazdanpanah Y, Perozziello A, Zahar JR, Lescure FX, Cousien A, Lucet JC
Hand hygiene improvement or antibiotic restriction to control the household transmission of extended-spectrum β-lactamase-producing Escherichia coli: a mathematical modelling study.
Antimicrobial Resistance and Infection Control 2020, 9, 139.

Birgand G, Mutters NT, Ahmad R, Tacconelli E, Lucet JC, Holmes A, Percept-R Study Group
Risk perception of the antimicrobial resistance by infection control specialists in Europe: a case-vignette study.
Antimicrobial Resistance and Infection Control 2020, 9, 33.

Djuikoue IC, Tambo E, Tazemda G, Njajou O, Makoudjou D, Sokeng V, Wandji M, Tomi C, Nanfack A, Dayomo A, Lacmago S, Tassadjo F, Sipowo RT, Kakam C, Djoko AB, Assob CN, Andremont A, Barbut F
Evaluation of inpatients Clostridium difficile prevalence and risk factors in Cameroon.
Infectious Diseases of Poverty 2020, 9, 122.

Vaittinada Ayar P, Jacquier H, Deniau B, Azibani F, Mebazaa A, Blet A
Analysis of blood culture in a rat model of cecal ligation and puncture induced sepsis.
Intensive Care Medicine Experimental 2020, 8, 18.

Massot M, Haenni M, Nguyen TT, Madec JY, Mentré F, Denamur E
Temporal dynamics of the fecal microbiota in veal calves in a 6-month field trial.
Animal Microbiome 2020, 2, 32.

Lilamand M, Saintout M, Vigan M, Bichon A, Tourame L, Diet AB, Iung B, Himbert D, Laouenan C, Raynaud-Simon A
Quality of life, physical performance and nutritional status in older patients hospitalized in a cardiology department.
Journal of geriatric cardiology: JGC 2020, 17, 410-416.

Riglet F, Mentre F, Veyrat-Follet C, Bertrand J
Bayesian Individual Dynamic Predictions with Uncertainty of Longitudinal Biomarkers and Risks of Survival Events in a Joint Modelling Framework: a Comparison Between Stan, Monolix, and NONMEM.
The AAPS journal 2020, 22, 50.

Loingeville F, Bertrand J, Nguyen TT, Sharan S, Feng K, Sun W, Han J, Grosser S, Zhao L, Fang L, Möllenhoff K, Dette H, Mentré F
New Model-Based Bioequivalence Statistical Approaches for Pharmacokinetic Studies with Sparse Sampling.
The AAPS journal 2020, 22, 141.

Gonçalves A, Mentré F, Lemenuel-Diot A, Guedj J
Model Averaging in Viral Dynamic Models.
The AAPS journal 2020, 22, 48.

Estrella Porter J, Camacho M, Viteri MI, Aguilar K, Belhadi D, Bettoli V, Buestán ADR, Dréno B, Endara P, Layton A, Machado N, Mateus R, Tan J, Terán E, Yépez P, Guillemot J
Pilot study for the evaluation and adaptation of a Four Item-Acne-Scar Risk Assessment Tool (4-ASRAT): a resource to estimate the risk of acne-induced scars.
F1000Research 2020, 9, 651.

Torres-Garcia S, Di Pompeo L, Eivers L, Gaborieau B, White SA, Pidoux AL, Kanigowska P, Yaseen I, Cai Y, Allshire RC
SpEDIT: A fast and efficient CRISPR/Cas9 method for fission yeast..
Wellcome open research 2020, 5, 274.

Touchon M, Perrin A, de Sousa JAM, Vangchhia B, Burn S, O'Brien CL, Denamur E, Gordon D, Rocha EP
Phylogenetic background and habitat drive the genetic diversification of Escherichia coli.
PLoS genetics 2020, 16, e1008866.

Galardini M, Clermont O, Baron A, Busby B, Dion S, Schubert S, Beltrao P, Denamur E
Major role of iron uptake systems in the intrinsic extra-intestinal virulence of the genus Escherichia revealed by a genome-wide association study.
PLoS genetics 2020, 16, e1009065.

Bertolotti A, Thioune M, Abel S, Belrose G, Calmont I, Césaire R, Cervantes M, Fagour L, Javelle É, Lebris C, Najioullah F, Pierre-François S, Rozé B, Vigan M, Laouénan C, Cabié A, Chronic Chikungunya working group of University Medical Center of Martinique
Prevalence of chronic chikungunya and associated risks factors in the French West Indies (La Martinique): A prospective cohort study.
PLoS neglected tropical diseases 2020, 14, e0007327.

Vallès X, Stenseth NC, Demeure C, Horby P, Mead PS, Cabanillas O, Ratsitorahina M, Rajerison M, Andrianaivoarimanana V, Ramasindrazana B, Pizarro-Cerda J, Scholz HC, Girod R, Hinnebusch BJ, Vigan-Womas I, Fontanet A, Wagner DM, Telfer S, Yazdanpanah Y, Tortosa P, Carrara G, Deuve J, Belmain SR, D’Ortenzio E, Baril L, Yang R
Human plague: An old scourge that needs new answers.
PLOS Neglected Tropical Diseases 2020, 14, e0008251.

Malvy D, Taburet AM, de Lamballerie X, Mentre F, Extramiana F
The safety profile of favipiravir should not be the first argument to suspend its evaluation in viral hemorrhagic fevers.
PLoS neglected tropical diseases 2020, 14, e0008259.

Lecronier M, Tashk P, Tamzali Y, Tenaillon O, Denamur E, Barrou B, Aron-Wisnewsky J, Tourret J
Gut microbiota composition alterations are associated with the onset of diabetes in kidney transplant recipients.
PloS One 2020, 15, e0227373.

Fauroux B, Hascoët JM, Jarreau PH, Magny JF, Rozé JC, Saliba E, Schwarzinger M, Katz M
Risk factors for bronchiolitis hospitalization in infants: A French nationwide retrospective cohort study over four consecutive seasons (2009-2013).
PLOS ONE 2020, 15, e0229766.

Lamirel C, Valin N, Savatovsky J, Lescure FX, Alonso AS, Girard P, Vincensini JP, Girard PM, Salomon L, Cochereau I, Moulignier A, Lewin AS
Absence of peripapillary retinal nerve-fiber–layer thinning in combined antiretroviral therapy-treated, well-sustained aviremic persons living with HIV.
PLOS ONE 2020, 15, e0229977.

Parčina M, Schneider UV, Visseaux B, Jozić R, Hannet I, Lisby JG, Chan KH
Multicenter evaluation of the QIAstat Respiratory Panel—A new rapid highly multiplexed PCR based assay for diagnosis of acute respiratory tract infections.
PLOS ONE 2020, 15, e0230183.

Faure Bardon V, Peytavin G, Lê MP, Guilleminot T, Elefant E, Stirnemann J, Leruez-Ville M, Ville Y, Spradley FT
Placental transfer of Letermovir & Maribavir in the ex vivo human cotyledon perfusion model. New perspectives for in utero treatment of congenital cytomegalovirus infection.
PLOS ONE 2020, 15, e0232140.

Tchounga BK, Charpentier C, Coffie PA, Dabis F, Descamps D, Eholie SP, Ekouevi DK
Survival among antiretroviral-experienced HIV-2 patients experiencing virologic failure with drug resistance mutations in Cote d'Ivoire West Africa.
PloS One 2020, 15, e0236642.

Bouzid D, Visseaux B, Perozziello A, Lescure X, Duval X, Casalino E, Lucet JC, ED influenza management study group
Factors associated with single-room assignment among patients admitted through the emergency department during influenza epidemics.
PloS One 2020, 15, e0237214.

Gschwind R, Fournier T, Kennedy S, Tsatsaris V, Cordier AG, Barbut F, Butel MJ, Wydau-Dematteis S
Evidence for contamination as the origin for bacteria found in human placenta rather than a microbiota..
PloS one 2020, 15, e0237232.

Fontaine C, Armand-Lefèvre L, Magnan M, Nazimoudine A, Timsit JF, Ruppé E
Relationship between the composition of the intestinal microbiota and the tracheal and intestinal colonization by opportunistic pathogens in intensive care patients.
PloS One 2020, 15, e0237260.

Nuzzo A, Tran-Dinh A, Courbebaisse M, Peyre H, Plaisance P, Matet A, Ranque B, Faye A, de Lastours V, University of Paris OSCE and SBT groups
Improved clinical communication OSCE scores after simulation-based training: Results of a comparative study.
PloS One 2020, 15, e0238542.

Fournier AL, Parienti JJ, Champenois K, Feret P, Papot E, Yazdanpanah Y, Verdon R
Incidence and risk factors for medical care interruption in people living with HIV in a French provincial city.
PloS One 2020, 15, e0240417.

Bouzid D, Mullaert J, Le Hingrat Q, Laurent O, Duval X, Lescure X, Timsit JF, Descamps D, Montravers P, Choquet C, Lucet JC, Casalino E, Visseaux B, ED influenza study group
Characteristics associated with COVID-19 or other respiratory viruses' infections at a single-center emergency department.
PloS One 2020, 15, e0243261.

Borie R, Savale L, Dossier A, Ghosn J, Taillé C, Visseaux B, Jebreen K, Diallo A, Tesmoingt C, Morer L, Goletto T, Faucher N, Hajouji L, Neukirch C, Phillips M, Stelianides S, Bouadma L, Brosseau S, Ottaviani S, Pluvy J, Le Pluart D, Debray MP, Raynaud-Simon A, Descamps D, Khalil A, Timsit JF, Lescure FX, Descamps V, Papo T, Humbert M, Crestani B, Dieude P, Vicaut E, Zalcman G, Bichat & Kremlin-Bicêtre AP-HP COVID teams
Glucocorticoids with low-dose anti-IL1 anakinra rescue in severe non-ICU COVID-19 infection: A cohort study.
PloS One 2020, 15, e0243961.

Mboumba Bouassa RS, Pere H, Mossoro-Kpinde CD, Roques P, Gody JC, Moussa S, Veyer D, Gresenguet G, Charpentier C, Jenabian MA, Djoba Siawaya JF, Belec L
Purifying Selection in Human Immunodeficiency Virus-1 pol Gene in Perinatally Human Immunodeficiency Virus-1-Infected Children Harboring Discordant Immunological Response and Virological Nonresponse to Long-Term Antiretroviral Therapy.
Journal of Clinical Medicine Research 2020, 12, 369-376.

Vandingenen P, Chauvin A, Javaud N, Ghazali DA
Professional practice assessment for minor head injury management in emergency department and clinical impact of a simulation-based training: Interventional study (before/after).
Ulusal travma ve acil cerrahi dergisi = Turkish journal of trauma & emergency surgery: TJTES 2020, 26, 545-554.

Heilmann E, Gregoriano C, Wirz Y, Luyt CE, Wolff M, Chastre J, Tubach F, Christ-Crain M, Bouadma L, Annane D, Damas P, Kristoffersen KB, Oliveira CF, Stolz D, Tamm M, de Jong E, Reinhart K, Shehabi Y, Verduri A, Nobre V, Nijsten M, deLange DW, van Oers JAH, Beishuizen A, Girbes ARJ, Mueller B, Schuetz P
Association of kidney function with effectiveness of procalcitonin-guided antibiotic treatment: a patient-level meta-analysis from randomized controlled trials.
Clinical Chemistry and Laboratory Medicine 2020, 59, 441-453.

Choudhury A, Fenster JA, Fankhauser RG, Kaar JL, Tenaillon O, Gill RT
CRISPR/Cas9 recombineering-mediated deep mutational scanning of essential genes in Escherichia coli.
Molecular Systems Biology 2020, 16, e9265.

Egloff C, Picone O, Vauloup-Fellous C, Roques P
Mother to Child SARS-CoV-2 Transmission: Fact or Fantasy.
Virologie (Montrouge, France) 2020, 24, 142-146.

Dufour N, Fadel F, Gelée B, Dubost JL, Ardiot S, Di Donato P, Ricard JD
When a Ventilator Takes Autonomous Decisions without Seeking Approbation nor Warning Clinicians: A Case Series.
International Medical Case Reports Journal 2020, 13, 521-529.

Peiffer-Smadja N, Poda A, Ouedraogo AS, Guiard-Schmid JB, Delory T, Le Bel J, Bouvet E, Lariven S, Jeanmougin P, Ahmad R, Lescure FX
Paving the Way for the Implementation of a Decision Support System for Antibiotic Prescribing in Primary Care in West Africa: Preimplementation and Co-Design Workshop With Physicians.
Journal of Medical Internet Research 2020, 22, e17940.

Denis F, Galmiche S, Dinh A, Fontanet A, Scherpereel A, Benezit F, Lescure FX
Epidemiological Observations on the Association Between Anosmia and COVID-19 Infection: Analysis of Data From a Self-Assessment Web Application.
Journal of Medical Internet Research 2020, 22, e19855.

Yordanov Y, Dechartres A, Lescure X, Apra C, Villie P, Marchand-Arvier J, Debuc E, Dinh A, Jourdain P, AP-HP / Universities / Inserm COVID-19 Research Collaboration
Covidom, a Telesurveillance Solution for Home Monitoring Patients With COVID-19.
Journal of Medical Internet Research 2020, 22, e20748.

Galmiche S, Rahbe E, Fontanet A, Dinh A, Bénézit F, Lescure FX, Denis F
Implementation of a Self-Triage Web Application for Suspected COVID-19 and Its Impact on Emergency Call Centers: Observational Study.
Journal of Medical Internet Research 2020, 22, e22924.

Amoura A, Moktefi A, Halfon M, Karras A, Rafat C, Gibier JB, Gleeson PJ, Servais A, Argy N, Maillé P, Belenfant X, Gueutin V, Delpierre A, Tricot L, El Karoui K, Jourde-Chiche N, Houze S, Sahali D, Audard V
Malaria, Collapsing Glomerulopathy, and Focal and Segmental Glomerulosclerosis.
Clinical journal of the American Society of Nephrology: CJASN 2020, 15, 964-972.

Toubiana J, Levy C, Allali S, Jung C, Leruez-Ville M, Varon E, Bajolle F, Ouldali N, Chareyre J, Béchet S, Elbez A, Casanova JL, Chalumeau M, Cohen R, Cohen JF
Association between SARS-CoV-2 infection and Kawasaki-like multisystem inflammatory syndrome: a retrospective matched case-control study, Paris, France, April to May 2020.
Euro Surveillance: Bulletin Europeen Sur Les Maladies Transmissibles = European Communicable Disease Bulletin 2020, 25, 2001813.

Bernard Stoecklin S, Rolland P, Silue Y, Mailles A, Campese C, Simondon A, Mechain M, Meurice L, Nguyen M, Bassi C, Yamani E, Behillil S, Ismael S, Nguyen D, Malvy D, Lescure FX, Georges S, Lazarus C, Tabaï A, Stempfelet M, Enouf V, Coignard B, Levy-Bruhl D, Investigation team
First cases of coronavirus disease 2019 (COVID-19) in France: surveillance, investigations and control measures, January 2020.
Eurosurveillance 2020, 25,

Okba NMA, Müller MA, Li W, Wang C, GeurtsvanKessel CH, Corman VM, Lamers MM, Sikkema RS, de Bruin E, Chandler FD, Yazdanpanah Y, Le Hingrat Q, Descamps D, Houhou-Fidouh N, Reusken CBEM, Bosch BJ, Drosten C, Koopmans MPG, Haagmans BL
Severe Acute Respiratory Syndrome Coronavirus 2-Specific Antibody Responses in Coronavirus Disease 2019 Patients.
Emerging Infectious Diseases 2020, 26,

Jaspard M, Butel N, El Helali N, Marigot-Outtandy D, Guillot H, Peytavin G, Veziris N, Bodaghi B, Flandre P, Petitjean G, Caumes E, Pourcher V
Linezolid-Associated Neurologic Adverse Events in Patients with Multidrug-Resistant Tuberculosis, France.
Emerging Infectious Diseases 2020, 26, 1792-1800.

Vivanti AJ, Mattern J, Vauloup-Fellous C, Jani J, Rigonnot L, El Hachem L, Le Gouez A, Desconclois C, Ben M'Barek I, Sibiude J, Benachi A, Picone O, Cordier AG
Retrospective Description of Pregnant Women Infected with Severe Acute Respiratory Syndrome Coronavirus 2, France.
Emerging Infectious Diseases 2020, 26, 2069-2076.

Flament-Simon SC, García V, Duprilot M, Mayer N, Alonso MP, García-Meniño I, Blanco JE, Blanco M, Nicolas-Chanoine MH, Blanco J
High Prevalence of ST131 Subclades C2-H30Rx and C1-M27 Among Extended-Spectrum β-Lactamase-Producing Escherichia coli Causing Human Extraintestinal Infections in Patients From Two Hospitals of Spain and France During 2015.
Frontiers in Cellular and Infection Microbiology 2020, 10, 125.

Roisin L, Melloul E, Woerther PL, Royer G, Decousser JW, Guillot J, Dannaoui E, Botterel F
Modulated Response of Aspergillus fumigatus and Stenotrophomonas maltophilia to Antimicrobial Agents in Polymicrobial Biofilm.
Frontiers in Cellular and Infection Microbiology 2020, 10, 574028.

Iannetta M, Isnard S, Manuzak J, Guillerme JB, Notin M, Bailly K, Andrieu M, Amraoui S, Vimeux L, Figueiredo S, Charmeteau-de Muylder B, Vaton L, Hatton EX, Samri A, Autran B, Thiébaut R, Chaghil N, Glohi D, Charpentier C, Descamps D, Brun-Vézinet F, Matheron S, Cheynier R, Hosmalin A
Conventional Dendritic Cells and Slan+ Monocytes During HIV-2 Infection.
Frontiers in Immunology 2020, 11, 1658.

Lecorche E, Pean de Ponfilly G, Mougari F, Benmansour H, Poisnel E, Janvier F, Cambau E
Disseminated Mycobacterium chimaera Following Open-Heart Surgery, the Heater-Cooler Unit Worldwide Outbreak: Case Report and Minireview.
Frontiers in Medicine 2020, 7, 243.

Thy M, Tanaka S, Tran-Dinh A, Ribeiro L, Lortat-Jacob B, Donadio J, Zappella N, Ben-Rehouma M, Tashk P, Snauwaert A, Atchade E, Grall N, Montravers P
Dynamic Changes in Microbial Composition During Necrotizing Soft-Tissue Infections in ICU Patients.
Frontiers in Medicine 2020, 7, 609497.

Avanzi C, Lécorché E, Rakotomalala FA, Benjak A, Rapelanoro Rabenja F, Ramarozatovo LS, Cauchoix B, Rakoto-Andrianarivelo M, Tió-Coma M, Leal-Calvo T, Busso P, Boy-Röttger S, Chauffour A, Rasamoelina T, Andrianarison A, Sendrasoa F, Spencer JS, Singh P, Dashatwar DR, Narang R, Berland JL, Jarlier V, Salgado CG, Moraes MO, Geluk A, Randrianantoandro A, Cambau E, Cole ST
Population Genomics of Mycobacterium leprae Reveals a New Genotype in Madagascar and the Comoros..
Frontiers in microbiology 2020, 11, 711.

Cattoir V, Pourbaix A, Magnan M, Chau F, de Lastours V, Felden B, Fantin B, Guérin F
Novel Chromosomal Mutations Responsible for Fosfomycin Resistance in Escherichia coli..
Frontiers in microbiology 2020, 11, 575031.

Germont Z, Bidet P, Plainvert C, Bonacorsi S, Poyart C, Biran V, Frérot A, Faye A, Basmaci R
Invasive Streptococcus pyogenes Infections in <3-Month-Old Infants in France: Clinical and Laboratory Features.
Frontiers in Pediatrics 2020, 8, 204.

Goeller C, Desmarest M, Garraffo A, Bonacorsi S, Gaschignard J
Management of Febrile Urinary Tract Infection With or Without Bacteraemia in Children: A French Case-Control Retrospective Study..
Frontiers in pediatrics 2020, 8, 237.

Méchaï F, Cordel H, Guglielmetti L, Aubry A, Jankovic M, Viveiros M, Santin M, Goletti D, Cambau E
Management of Tuberculosis: Are the Practices Homogeneous in High-Income Countries?.
Frontiers in Public Health 2020, 8, 443.

Flament-Simon SC, Nicolas-Chanoine MH, García V, Duprilot M, Mayer N, Alonso MP, García-Meniño I, Blanco JE, Blanco M, Blanco J
Clonal Structure, Virulence Factor-encoding Genes and Antibiotic Resistance of Escherichia coli, Causing Urinary Tract Infections and Other Extraintestinal Infections in Humans in Spain and France during 2016.
Antibiotics (Basel, Switzerland) 2020

Eloy G, Lebeaux D, Launay M, Fernandez-Gerlinger MP, Billaud E, Douez E, Mainardi JL, Bouyer B, Jullien V
Influence of Renal Function and Age on the Pharmacokinetics of Levofloxacin in Patients with Bone and Joint Infections.
Antibiotics (Basel, Switzerland) 2020, 9, 401.

Peiffer-Smadja N, Allison R, Jones LF, Holmes A, Patel P, Lecky DM, Ahmad R, McNulty CAM
Preventing and Managing Urinary Tract Infections: Enhancing the Role of Community Pharmacists-A Mixed Methods Study.
Antibiotics (Basel, Switzerland) 2020, 9, E583.

Sangare A, Dong A, Valente M, Pyatigorskaya N, Cao A, Altmayer V, Zyss J, Lambrecq V, Roux D, Morlon Q, Perez P, Ben Salah A, Virolle S, Puybasset L, Sitt JD, Rohaut B, Naccache L
Neuroprognostication of Consciousness Recovery in a Patient with COVID-19 Related Encephalitis: Preliminary Findings from a Multimodal Approach.
Brain Sciences 2020, 10,

Eslier M, Deneux-Tharaux C, Sauvegrain P, Schmitz T, Luton D, Mandelbrot L, Estellat C, Azria E
Association between Migrant Women's Legal Status and Prenatal Care Utilization in the PreCARE Cohort.
International Journal of Environmental Research and Public Health 2020, 17,

Casalino E, Choquet C, Bouzid D, Peyrony O, Curac S, Revue E, Fontaine JP, Plaisance P, Chauvin A, Ghazali DA
Analysis of Emergency Department Visits and Hospital Activity during Influenza Season, COVID-19 Epidemic, and Lockdown Periods in View of Managing a Future Disaster Risk: A Multicenter Observational Study.
International Journal of Environmental Research and Public Health 2020, 17, 8302.

Nguyen Y, Stirnemann J, Lautredoux F, Cador B, Bengherbia M, Yousfi K, Hamroun D, Astudillo L, Billette de Villemeur T, Brassier A, Camou F, Dalbies F, Dobbelaere D, Gaches F, Leguy-Seguin V, Masseau A, Pers YM, Pichard S, Serratrice C, Berger MG, Fantin B, Belmatoug N, On Behalf Of The French Evaluation Of Gaucher Disease Treatment Committee n
Immunoglobulin Abnormalities in Gaucher Disease: an Analysis of 278 Patients Included in the French Gaucher Disease Registry.
International Journal of Molecular Sciences 2020, 21,

Narang K, Ibirogba ER, Elrefaei A, Trad ATA, Theiler R, Nomura R, Picone O, Kilby M, Escuriet R, Suy A, Carreras E, Tonni G, Ruano R
SARS-CoV-2 in Pregnancy: A Comprehensive Summary of Current Guidelines.
Journal of Clinical Medicine 2020

Belaroussi Y, Roblot P, Peiffer-Smadja N, Delaye T, Mathoulin-Pelissier S, Lemeux J, Le Moal G, Caumes E, Roblot F, Bleibtreu A
Why Methodology Is Important: Coffee as a Candidate Treatment for COVID-19?.
Journal of Clinical Medicine 2020, 9, E3691.

Pilmis B, Le Monnier A, Zahar JR
Gut Microbiota, Antibiotic Therapy and Antimicrobial Resistance: A Narrative Review.
Microorganisms 2020, 8, 269.

Leo S, Lazarevic V, Girard M, Gaïa N, Schrenzel J, de Lastours V, Fantin B, Bonten M, Carmeli Y, Rondinaud E, Harbarth S, Huttner BD
Metagenomic Characterization of Gut Microbiota of Carriers of Extended-Spectrum Beta-Lactamase or Carbapenemase-Producing Enterobacteriaceae Following Treatment with Oral Antibiotics and Fecal Microbiota Transplantation: Results from a Multicenter Randomized Trial.
Microorganisms 2020

Joseph A, Cointe A, Mariani Kurkdjian P, Rafat C, Hertig A
Shiga Toxin-Associated Hemolytic Uremic Syndrome: A Narrative Review.
Toxins 2020, 12,

Mihimit A, Adawaye C, Péré H, Costiniuk C, Koyalta D, Mbopi-Keou FX, Bouassa RSM, Talla F, Moussa S, Longo JDD, Tchombou BHZ, Grésenguet G, Charpentier C, Bélec L
HSV-2 Infection as a Potential Cofactor for HIV Disease Progression and Selection of Drug Resistance Mutations in Adults under WHO-Recommended First-Line Antiretroviral Therapy: A Multicentric, Cross-Sectional Study in Cameroon, Central African Republic, Chad, and Gabon.
Tropical Medicine and Infectious Disease 2020, 5, 136.

Masoud K, Araj GF, Reslan L, Fadlallah S, Wehbe M, Itani L, Avedissian A, Dbaibo G, Saade A, Refrégier G, Sola C, Matar GM
Spoligotyping of Mycobacterium tuberculosis isolates using Luminex®-based method in Lebanon..
Journal of infection in developing countries 2020, 14, 878-885.

Brayette A, Essig M, Carrier P, Debette-Gratien M, Labrunie A, Alain S, Maynard M, Ganne-Carrié N, Nguyen-Khac E, Pinet P, De Ledinghen V, Renou C, Mathurin P, Vanlemmens C, Di Martino V, Gervais A, Foucher J, Isabelle FH, Vergniol J, Hourmand-Ollivier I, Cohen D, Duval X, Poynard T, Bardou M, Abergel A, Dao MT, Thévenot T, Hiriart JB, Canva V, Lassailly G, Aurières C, Boyer N, Thabut D, Bernard PH, Schnee M, Larrey D, Hanslik B, Hommel S, Jacques J, Loustaud-Ratti V
Subclinical proximal tubulopathy in hepatitis B: The roles of nucleot(s)ide analogue treatment and the hepatitis B virus.
World Journal of Hepatology 2020, 12, 1326-1340.

Dang E, Sayagh F, Lê MP, Neuville M, Sinnah F, Timsit JF, Peytavin G
Plasma pharmacokinetics of bedaquiline administered by nasogastric tube in an intensive care unit.
The International Journal of Tuberculosis and Lung Disease: The Official Journal of the International Union Against Tuberculosis and Lung Disease 2020, 24, 110-112.

Pierre-Audigier C, Talla C, Alame-Emane AK, Audigier B, Grall N, Ruimy R, Andremont A, Cadet-Daniel V, Sola C, Takiff H, Gicquel B, Vray M, Armand-Lefevre L
Tuberculosis trends in a hot-spot region in Paris, France.
The International Journal of Tuberculosis and Lung Disease: The Official Journal of the International Union Against Tuberculosis and Lung Disease 2020, 24, 428-435.

Lerolle N, Laanani M, Galicier L, Rivière S, Meynard JL, Azoulay E, Jeblaoui A, Lalande V, Mougari F, Fardet L, Coppo P, Goujard C, Molina JM, Lambotte O
Factors associated with tuberculosis-associated haemophagocytic syndrome: a multicentre case-control study.
The International Journal of Tuberculosis and Lung Disease: The Official Journal of the International Union Against Tuberculosis and Lung Disease 2020, 24, 124-130.

Lévy Y, Lelièvre JD, Assoumou L, Aznar E, Pulido F, Tambussi G, Crespo M, Meybeck A, Molina JM, Delaugerre C, Izopet J, Peytavin G, Cardon F, Diallo A, Lancar R, Béniguel L, Costagliola D
Addition of Maraviroc Versus Placebo to Standard Antiretroviral Therapy for Initial Treatment of Advanced HIV Infection: A Randomized Trial.
Annals of Internal Medicine 2020, 172, 297.

Escudero JA, Nivina A, Kemble HE, Loot C, Tenaillon O, Mazel D
Primary and promiscuous functions coexist during evolutionary innovation through whole protein domain acquisitions.
eLife 2020, 9, e58061.

Roux P, Josselin LB, Grall N, Dumonceau O, Leport C
[Recurrent urinary tract infections in men: how to avoid antibiotics].
La Revue Du Praticien 2020, 70, 1053-1057.

Mercier JC, Basmaci R, Gaschignard J, Titomanlio L
[Acute abdominal and lumbar pain in children and adult].
La Revue Du Praticien 2020, 70, e299-e308.

Mercier JC, Basmaci R, Gaschignard J, Titomanlio L
[Acute abdominal and lumbar pain in children].
La Revue Du Praticien 2020, 70, e309-e310.

 2019                                                                            

Thille AW, Muller G, Gacouin A, Coudroy R, Decavèle M, Sonneville R, Beloncle F, Girault C, Dangers L, Lautrette A, Cabasson S, Rouzé A, Vivier E, Le Meur A, Ricard JD, Razazi K, Barberet G, Lebert C, Ehrmann S, Sabatier C, Bourenne J, Pradel G, Bailly P, Terzi N, Dellamonica J, Lacave G, Danin PÉ, Nanadoumgar H, Gibelin A, Zanre L, Deye N, Demoule A, Maamar A, Nay MA, Robert R, Ragot S, Frat JP
Effect of Postextubation High-Flow Nasal Oxygen With Noninvasive Ventilation vs High-Flow Nasal Oxygen Alone on Reintubation Among Patients at High Risk of Extubation Failure: A Randomized Clinical Trial..
JAMA 2019, 322, 1465-1475.

Garrouste-Orgeas M, Bailly S, Timsit JF
Use of an ICU Diary and Patient Posttraumatic Stress Disorder Symptoms—Reply.
JAMA 2019, 322, 2025.

Garrouste-Orgeas M, Flahault C, Vinatier I, Rigaud JP, Thieulot-Rolin N, Mercier E, Rouget A, Grand H, Lesieur O, Tamion F, Hamidfar R, Renault A, Parmentier-Decrucq E, Monseau Y, Argaud L, Bretonnière C, Lautrette A, Badié J, Boulet E, Floccard B, Forceville X, Kipnis E, Soufir L, Valade S, Bige N, Gaffinel A, Hamzaoui O, Simon G, Thirion M, Bouadma L, Large A, Mira JP, Amdjar-Badidi N, Jourdain M, Jost PH, Maxime V, Santoli F, Ruckly S, Vioulac C, Leborgne MA, Bellalou L, Fasse L, Misset B, Bailly S, Timsit JF
Effect of an ICU Diary on Posttraumatic Stress Disorder Symptoms Among Patients Receiving Mechanical Ventilation: A Randomized Clinical Trial.
JAMA 2019, 322, 229-239.

Brunet-Possenti F, Charpentier C, Bouhnik Y, Deschamps L, Descamps D, Moins-Teisserenc H, Descamps V
Occurrence of Extensive Cutaneous Human Papillomavirus Infection After Initiation of Tofacitinib Therapy.
JAMA Dermatology 2019, 155, 629.

Ouldali N, Levy C, Minodier P, Morin L, Biscardi S, Aurel M, Dubos F, Dommergues MA, Mezgueldi E, Levieux K, Madhi F, Hees L, Craiu I, Gras Le Guen C, Launay E, Zenkhri F, Lorrot M, Gillet Y, Béchet S, Hau I, Martinot A, Varon E, Angoulvant F, Cohen R
Long-term Association of 13-Valent Pneumococcal Conjugate Vaccine Implementation With Rates of Community-Acquired Pneumonia in Children.
JAMA pediatrics 2019, 173, 362-370.

Heyard R, Timsit J, Essaied WI, Held L, on behalf of the COMBACTE‐MAGNET consortium
Dynamic clinical prediction models for discrete time‐to‐event data with competing risks—A case study on the OUTCOMEREA database.
Biometrical Journal 2019, 61, 514-534.

Tardivon C, Desmée S, Kerioui M, Bruno R, Wu B, Mentré F, Mercier F, Guedj J
Association Between Tumor Size Kinetics and Survival in Patients With Urothelial Carcinoma Treated With Atezolizumab: Implication for Patient Follow-Up.
Clinical Pharmacology and Therapeutics 2019, 106, 810-820.

Hleyhel M, Goujon S, Sibiude J, Tubiana R, Dollfus C, Faye A, Mandelbrot L, Clavel J, Warszawski J, Blanche S, ANRS French Perinatal Cohort study Group
Risk of cancer in children exposed to antiretroviral nucleoside analogues in utero: The french experience.
Environmental and Molecular Mutagenesis 2019, 60, 404-409.

Ounissi M, Rodrigues C, Bienayme H, Duhamel P, Pons G, Dulac O, Nabbout R, Chiron C, Jullien V
Proposition of a Minimal Effective Dose of Vigabatrin for the Treatment of Infantile Spasms Using Pediatric and Adult Pharmacokinetic Data.
Journal of Clinical Pharmacology 2019, 59, 177-188.

Avettand-Fenoel V, Bayan T, Gardiennet E, Boufassa F, Lopez P, Lecuroux C, Noel N, Trémeaux P, Monceaux V, Autran B, Meyer L, Saez-Cirion A, Lambotte O, Rouzioux C, CODEX ANRS Cohort Study Group
Dynamics in HIV-DNA levels over time in HIV controllers.
Journal of the International AIDS Society 2019, 22, e25221.

Lê MP, Valantin M, Assoumou L, Soulie C, Le Mestre S, Weiss L, Yazdanpanah Y, Molina J, Bouchaud O, Raffi F, Reynes J, Calvez V, Marcelin A, Costagliola D, Katlama C, Peytavin G, ANRS‐163 ETRAL study group, Duvivier C, Goujard C, Jeantils V, Salmon D, Simon A, Colin de Verdière N, Morlat P, Poizot‐Martin I, Allavena C, Naqvi A, Bernard L, Chidiac C, Hamdoud K
Lack of a Clinically Significant Pharmacokinetic Interaction between Etravirine and Raltegravir Using an Original Approach Based on Drug Metabolism, Protein Binding, and Penetration in Seminal Fluid: A Pharmacokinetic Substudy of the ANRS ‐163 ETRAL Study.
Pharmacotherapy: The Journal of Human Pharmacology and Drug Therapy 2019, 39, 514-520.

D'Antonio F, Reeves S, Sheng Y, McLachlan E, de Lena C, Howard R, Bertrand J
Misidentification Subtype of Alzheimer's Disease Psychosis Predicts a Faster Cognitive Decline.
CPT: pharmacometrics & systems pharmacology 2019, 8, 308-315.

Mentré F
CPT: Pharmacometrics & Systems Pharmacology 2.0.
CPT: pharmacometrics & systems pharmacology 2019, 8, 195-196.

Krause A, Kloft C, Huisinga W, Karlsson M, Pinheiro J, Bies R, Rogers J, Mentré F, Musser BJ, ASA Special Interest Group on Statistics and Pharmacometrics/ASA Special Interest Group on Statistics and Pharmacometrics (SIG SxP)
Comment on Jaki et al., A proposal for a new PhD level curriculum on quantitative methods for drug development. Pharmaceutical Statistics 17 (5):593-606, Sep/Oct 2018, DOI: 10.1002/pst.1873.
Pharmaceutical Statistics 2019, 18, 278-281.

von Cube M, Schumacher M, Bailly S, Timsit JF, Lepape A, Savey A, Machut A, Wolkewitz M
The population-attributable fraction for time-dependent exposures and competing risks-A discussion on estimands.
Statistics in Medicine 2019, 38, 3880-3895.

El Khattabi LA, Brun S, Gueguen P, Chatron N, Guichoux E, Schutz S, Nectoux J, Sorlin A, Quere M, Boudjarane J, Tsatsaris V, Mandelbrot L, Schluth-Bolard C, Dupont JM, Rooryck C, H+ Consortium
Performance of semiconductor sequencing platform for non-invasive prenatal genetic screening for fetal aneuploidy: results from a multicenter prospective cohort study in a clinical setting.
Ultrasound in Obstetrics & Gynecology: The Official Journal of the International Society of Ultrasound in Obstetrics and Gynecology 2019, 54, 246-254.

Lucet JC, Heard I, Roueli A, Lafourcade A, Mandelbrot L, Estellat C, Dommergues M, PREEV Study Group
Transvaginal ultrasound probes are human papillomavirus-free following low-level disinfection: cross-sectional multicenter survey.
Ultrasound in Obstetrics & Gynecology: The Official Journal of the International Society of Ultrasound in Obstetrics and Gynecology 2019, 54, 688-695.

the IPREA-AQVAR Study Group, Kalfon P, Alessandrini M, Boucekine M, Renoult S, Geantot MA, Deparis-Dusautois S, Berric A, Collange O, Floccard B, Mimoz O, Julien A, Robert R, Audibert J, Renault A, Follin A, Thevenin D, Revel N, Venot M, Patrigeon RG, Signouret T, Fromentin M, Sharshar T, Vigne C, Pottecher J, Levrat Q, Sossou A, Garrouste-Orgeas M, Quenot JP, Boulle C, Azoulay E, Baumstarck K, Auquier P
Tailored multicomponent program for discomfort reduction in critically ill patients may decrease post-traumatic stress disorder in general ICU survivors at 1 year.
Intensive Care Medicine 2019, 45, 223-235.

Timsit JF, Bassetti M, Cremer O, Daikos G, de Waele J, Kallil A, Kipnis E, Kollef M, Laupland K, Paiva JA, Rodríguez-Baño J, Ruppé É, Salluh J, Taccone FS, Weiss E, Barbier F
Rationalizing antimicrobial therapy in the ICU: a narrative review.
Intensive Care Medicine 2019, 45, 172-189.

Papin G, Sonneville R, Nataf P, Bouadma L
Emergency craniotomy in semi-lateral position for posterior fossa hemorrhage evacuation under venoarterial extracorporeal membrane oxygenation.
Intensive Care Medicine 2019, 45, 1152-1153.

Schnell D, Montlahuc C, Bruneel F, Resche-Rigon M, Kouatchet A, Zahar JR, Darmon M, Pene F, Lemiale V, Rabbat A, Vincent F, Azoulay E, Mokart D
De-escalation of antimicrobial therapy in critically ill hematology patients: a prospective cohort study.
Intensive Care Medicine 2019, 45, 743-745.

Timsit JF, Citerio G, Lavilloniere M, Perner A, Ruckly S, Bakker J, Bassetti M, Benoit D, Curtis JR, Doig GS, Herridge M, Jaber S, Papazian L, Peters MJ, Singer P, Smith M, Soares M, Torres A, Vieillard-Baron A, Azoulay E
Determinants of downloads and citations for articles published in Intensive Care Medicine.
Intensive Care Medicine 2019, 45, 1058-1060.

Levy M, Bonacorsi S, Naudin J, Caseris M, Thebault E, Mariani-Kurkdjian P, Chomton M, Sommet J, Dauger S, Doit C
Multidrug-resistant bacterial carriage and related healthcare-associated infections in a pediatric intensive care unit: a 6-year prospective study.
Intensive Care Medicine 2019, 45, 1037-1039.

Pons S, Timsit JF, Ruckly S, Schwebel C, Papazian L, Azoulay E, Reignier J, Zafrani L
Impact of macrolide therapy in critically ill patients with acute respiratory failure: a desirability of outcome ranking analysis to investigate the OUTCOMEREA database.
Intensive Care Medicine 2019

Ricard JD, Gregoretti C
Nasal high-flow preoxygenation for endotracheal intubation in the critically ill patient? Pro.
Intensive Care Medicine 2019, 45, 529-531.

Timsit JF, Sonneville R, Kalil AC, Bassetti M, Ferrer R, Jaber S, Lanternier F, Luyt CE, Machado F, Mikulska M, Papazian L, Pène F, Poulakou G, Viscoli C, Wolff M, Zafrani L, Van Delden C
Diagnostic and therapeutic approach to infectious diseases in solid organ transplant recipients.
Intensive Care Medicine 2019, 45, 573-591.

Martin-Loeches I, Antonelli M, Cuenca-Estrella M, Dimopoulos G, Einav S, De Waele JJ, Garnacho-Montero J, Kanj SS, Machado FR, Montravers P, Sakr Y, Sanguinetti M, Timsit JF, Bassetti M
ESICM/ESCMID task force on practical management of invasive candidiasis in critically ill patients.
Intensive Care Medicine 2019, 45, 789-805.

Timsit JF, Schwebel C, Styfalova L, Cornet M, Poirier P, Forrestier C, Ruckly S, Jacob MC, Souweine B
Impact of bronchial colonization with Candida spp. on the risk of bacterial ventilator-associated pneumonia in the ICU: the FUNGIBACT prospective cohort study.
Intensive Care Medicine 2019, 45, 834-843.

Blot S, Poulakou G, Timsit JF
Catheter-associated bloodstream infection rates: how low can you go?.
Intensive Care Medicine 2019, 45, 896-897.

Jaquet P, de Montmollin E, Dupuis C, Sazio C, Conrad M, Susset V, Demeret S, Tadie JM, Argaud L, Barbier F, Sarton B, Chabane R, Daubin D, Brulé N, Lerolle N, Alves M, Da Silva D, Kalioubi AE, Silva S, Bailly P, Wolff M, Bouadma L, Timsit JF, Sonneville R, ENCEPHALITICA study group
Functional outcomes in adult patients with herpes simplex encephalitis admitted to the ICU: a multicenter cohort study.
Intensive Care Medicine 2019, 45, 1103-1111.

May F, Peytavin G, Fourati S, Pressiat C, Carteaux G, Razazi K, Mekontso Dessap A, de Prost N
Paracetamol absorption test to detect poor enteric absorption of oseltamivir in intensive care unit patients with severe influenza: a pilot study.
Intensive Care Medicine 2019, 45, 1484-1486.

Laurent A, Reignier J, Le Gouge A, Cottereau A, Adda M, Annane D, Audibert J, Barbier F, Bardou P, Bourcier S, Bourenne J, Boyer A, Brenas F, Das V, Desachy A, Devaquet J, Feissel M, Ganster F, Garrouste-Orgeas M, Grillet G, Guisset O, Hamidfar-Roy R, Hyacinthe AC, Jochmans S, Jourdain M, Lautrette A, Lerolle N, Lesieur O, Lion F, Mateu P, Megarbane B, Merceron S, Mercier E, Messika J, Morin-Longuet P, Philippon-Jouve B, Quenot JP, Renault A, Repesse X, Rigaud JP, Robin S, Roquilly A, Seguin A, Thevenin D, Tirot P, Vinatier I, Azoulay E, Robert R, Kentish-Barnes N
“You helped me keep my head above water”—experience of bereavement research after loss of a loved one in the ICU: insights from the ARREVE study.
Intensive Care Medicine 2019, 45, 1252-1261.

Martin-Loeches I, Torres A, Povoa P, Zampieri FG, Salluh J, Nseir S, Ferrer M, Rodriguez A, TAVeM study Group
The association of cardiovascular failure with treatment for ventilator-associated lower respiratory tract infection.
Intensive Care Medicine 2019, 45, 1753-1762.

Miailhe AF, Mercier E, Maamar A, Lacherade JC, Le Thuaut A, Gaultier A, Asfar P, Argaud L, Ausseur A, Ben Salah A, Botoc V, Chaoui K, Charpentier J, Cracco C, De Prost N, Eustache ML, Ferré A, Gauvin E, Goursaud S, Grall M, Guiot P, Jonas M, Lambiotte F, Landais M, Lemarié J, Lesieur O, Lhommet C, Michel P, Monseau Y, Moschietto S, Nseir S, Osman D, Pillot J, Piton G, Sedillot N, Sirodot M, Thevenin D, Zafrani L, Zerbib Y, Bourhy P, Lascarrou JB, Reignier J, LEPTOREA
Severe leptospirosis in non-tropical areas: a nationwide, multicentre, retrospective study in French ICUs.
Intensive Care Medicine 2019, 45, 1763-1773.

Buetti N, Ruckly S, Lucet JC, Mimoz O, Souweine B, Timsit JF
Short-term dialysis catheter versus central venous catheter infections in ICU patients: a post hoc analysis of individual data of 4 multi-centric randomized trials.
Intensive Care Medicine 2019

Blot S, Antonelli M, Arvaniti K, Blot K, Creagh-Brown B, de Lange D, De Waele J, Deschepper M, Dikmen Y, Dimopoulos G, Eckmann C, Francois G, Girardis M, Koulenti D, Labeau S, Lipman J, Lipovestky F, Maseda E, Montravers P, Mikstacki A, Paiva JA, Pereyra C, Rello J, Timsit JF, Vogelaers D, Abdominal Sepsis Study (AbSeS) group on behalf of the Trials Group of the European Society of Intensive Care Medicine
Epidemiology of intra-abdominal infection and sepsis in critically ill patients: "AbSeS", a multinational observational cohort study and ESICM Trials Group Project.
Intensive Care Medicine 2019, 45, 1703-1717.

Couffignal C, Bertrand J, Sportiche S, Jarroir M, El Balkhi S, Djebrani-Oussedik N, Poupon J, Declèves X, Mentré F, Bellivier F
Population pharmacokinetic modeling of sustained release lithium in the serum, erythrocytes and urine of patients with bipolar disorder.
European Journal of Clinical Pharmacology 2019, 75, 519-528.

Barrail-Tran A, Goldwirt L, Gelé T, Laforest C, Lavenu A, Danjou H, Radenne S, Leroy V, Houssel-Debry P, Duvoux C, Kamar N, De Ledinghen V, Canva V, Conti F, Durand F, D'Alteroche L, Botta-Fridlund D, Moreno C, Cagnot C, Samuel D, Fougerou-Leurent C, Pageaux GP, Duclos-Vallée JC, Taburet AM, Coilly A
Comparison of the effect of direct-acting antiviral with and without ribavirin on cyclosporine and tacrolimus clearance values: results from the ANRS CO23 CUPILT cohort.
European Journal of Clinical Pharmacology 2019, 75, 1555-1563.

Nicolas-Chanoine MH, Vigan M, Laouénan C, Robert J, “E-carb Study Group”
Risk factors for carbapenem-resistant Enterobacteriaceae infections: a French case-control-control study.
European Journal of Clinical Microbiology & Infectious Diseases: Official Publication of the European Society of Clinical Microbiology 2019, 38, 383-393.

Ong DSY, Zapf TC, Cevik M, Palacios-Baena ZR, Barać A, Cimen C, Maraolo AE, Rönnberg C, Cambau E, Poljak M, Trainee Association of the European Society of Clinical Microbiology and Infectious Diseases (ESCMID)
Current mentorship practices in the training of the next generation of clinical microbiology and infectious disease specialists: an international cross-sectional survey.
European Journal of Clinical Microbiology & Infectious Diseases: Official Publication of the European Society of Clinical Microbiology 2019, 38, 659-665.

Delerue T, Cordel H, Delerue T, Figoni J, Dziri S, Billard-Pomares T, Bouchaud O, Carbonnelle E, Zahar JR
Prediction of methicillin-resistant Staphylococcus aureus bloodstream infection: do we need rapid diagnostic tests?.
European Journal of Clinical Microbiology & Infectious Diseases: Official Publication of the European Society of Clinical Microbiology 2019, 38, 1319-1326.

Frerot A, Baud O, Colella M, Taibi L, Bonacorsi S, Alberti C, Mohamed D, Biran V
Cord blood procalcitonin level and early-onset sepsis in extremely preterm infants.
European Journal of Clinical Microbiology & Infectious Diseases: Official Publication of the European Society of Clinical Microbiology 2019, 38, 1651-1657.

for the EUVAE Study Group, Rello J, Ramírez-Estrada S, Romero A, Arvaniti K, Koulenti D, Nseir S, Oztoprak N, Bouadma L, Vidaur L, Lagunes L, Peña-López Y
Factors associated with ventilator-associated events: an international multicenter prospective cohort study.
European Journal of Clinical Microbiology & Infectious Diseases 2019, 38, 1693-1699.

Ciangura C, Coupaye M, Deruelle P, Gascoin G, Calabrese D, Cosson E, Ducarme G, Gaborit B, Lelièvre B, Mandelbrot L, Petrucciani N, Quilliot D, Ritz P, Robin G, Sallé A, Gugenheim J, Nizard J, BARIA-MAT Group
Clinical Practice Guidelines for Childbearing Female Candidates for Bariatric Surgery, Pregnancy, and Post-partum Management After Bariatric Surgery.
Obesity Surgery 2019, 29, 3722-3734.

Berger J, Vigan M, Pereira B, Nguyen TT, Froissart R, Belmatoug N, Dalbiès F, Masseau A, Rose C, Serratrice C, Pers YM, Bertchansky I, Camou F, Bengherbia M, Bourgne C, Caillaud C, Pettazzoni M, Berrahal A, Stirnemann J, Mentré F, Berger MG
Intra-monocyte Pharmacokinetics of Imiglucerase Supports a Possible Personalized Management of Gaucher Disease Type 1.
Clinical Pharmacokinetics 2019, 58, 469-482.

Arangalage D, Mathieu T, Nguyen V, Cimadevilla C, Kerneis C, Duval X, Tubiana S, Hyafil F, Ou P, Tribouilloy C, Vahanian A, Messika-Zeitoun D
Epicardial adipose tissue volume is associated with left ventricular remodelling in calcific aortic valve stenosis.
Archives of Cardiovascular Diseases 2019, 112, 594-603.

Cointe A, de Ponfilly GP, Munier AL, Bachir M, Benmansour H, Crémieux AC, Forien M, Frazier A, Krief E, Cambau E, Jacquier H
Native joint septic arthritis due to Clostridium tarantellae.
Anaerobe 2019, 56, 46-48.

Carrie C, Walewski V, Levy C, Alexandre C, Baleine J, Charreton C, Coche-Monier B, Caeymaex L, Lageix F, Lorrot M, Klosowski S, Hess L, Zafer O, Gaudelus J, Pinquier D, Carbonnelle E, Cohen R, de Pontual L
Klebsiella pneumoniae and Klebsiella oxytoca meningitis in infants. Epidemiological and clinical features.
Archives De Pediatrie: Organe Officiel De La Societe Francaise De Pediatrie 2019, 26, 12-15.

Mageau A, Timsit JF, Perrozziello A, Ruckly S, Dupuis C, Bouadma L, Papo T, Sacre K
The burden of chronic kidney disease in systemic lupus erythematosus: A nationwide epidemiologic study.
Autoimmunity Reviews 2019, 18, 733-737.

Haddaoui M, Sola C, Raouafi N, Korri-Youssoufi H
E-DNA detection of rpoB gene resistance in Mycobacterium tuberculosis in real samples using Fe(3)O(4)/polypyrrole nanocomposite..
Biosensors & bioelectronics 2019, 128, 76-82.

de Tymowski C, Heming N, Correia MDT, Abbad L, Chavarot N, Le Stang MB, Flament H, Bex J, Boedec E, Bounaix C, Soler-Torronteras R, Denamur E, Galicier L, Oksenhendler E, Fehling HJ, Pinheiro da Silva F, Benhamou M, Monteiro RC, Ben Mkaddem S
CD89 Is a Potent Innate Receptor for Bacteria and Mediates Host Protection from Sepsis.
Cell Reports 2019, 27, 762-775.e5.

Rollet-Cohen V, Roux AL, Le Bourgeois M, Sapriel G, El Bahri M, Jais JP, Heym B, Mougari F, Raskine L, Véziris N, Gaillard JL, Sermet-Gaudelus I
Mycobacterium bolletii Lung Disease in Cystic Fibrosis..
Chest 2019, 156, 247-254.

Siméon S, Le Moing V, Tubiana S, Duval X, Fournier D, Lavigne JP, Erpelding ML, Gustave CA, Desage S, Chirouze C, Vandenesch F, Tattevin P, VIRSTA/AEPEI Study Group
Time to blood culture positivity: An independent predictor of infective endocarditis and mortality in patients with Staphylococcus aureus bacteraemia.
Clinical Microbiology and Infection: The Official Publication of the European Society of Clinical Microbiology and Infectious Diseases 2019, 25, 481-488.

Maataoui N, Mayet A, Duron S, Delacour H, Mentré F, Laouenan C, Desvillechabrol D, Cokelaer T, Meynard JB, Ducher A, Andremont A, Armand-Lefèvre L, Mérens A
High acquisition rate of extended-spectrum β-lactamase-producing Enterobacteriaceae among French military personnel on mission abroad, without evidence of inter-individual transmission.
Clinical Microbiology and Infection: The Official Publication of the European Society of Clinical Microbiology and Infectious Diseases 2019, 25, 631.e1-631.e9.

Basmaci R, Deschamps K, Levy C, Mathy V, Corrard F, Thollot F, Béchet S, Sobral E, Bidet P, Cohen R, Bonacorsi S
Prevalence of Kingella kingae oropharyngeal carriage and predominance of type a and type b polysaccharide capsules among French young children.
Clinical Microbiology and Infection: The Official Publication of the European Society of Clinical Microbiology and Infectious Diseases 2019, 25, 114-116.

Huttner BD, de Lastours V, Wassenberg M, Maharshak N, Mauris A, Galperine T, Zanichelli V, Kapel N, Bellanger A, Olearo F, Duval X, Armand-Lefevre L, Carmeli Y, Bonten M, Fantin B, Harbarth S, R-Gnosis WP3 study group
A 5-day course of oral antibiotics followed by faecal transplantation to eradicate carriage of multidrug-resistant Enterobacteriaceae: a randomized clinical trial.
Clinical Microbiology and Infection: The Official Publication of the European Society of Clinical Microbiology and Infectious Diseases 2019, 25, 830-838.

Tauzin M, Ouldali N, Lévy C, Béchet S, Cohen R, Caeymaex L
Combination therapy with ciprofloxacin and third-generation cephalosporin versus third-generation cephalosporin monotherapy in Escherichia coli meningitis in infants: a multicentre propensity score-matched observational study.
Clinical Microbiology and Infection: The Official Publication of the European Society of Clinical Microbiology and Infectious Diseases 2019, 25, 1006-1012.

Amarsy R, Guéret D, Benmansour H, Flicoteaux R, Berçot B, Meunier F, Mougari F, Jacquier H, Pean de Ponfilly G, Clermont O, Denamur E, Teixeira A, Cambau E
Determination of Escherichia coli phylogroups in elderly patients with urinary tract infection or asymptomatic bacteriuria.
Clinical Microbiology and Infection: The Official Publication of the European Society of Clinical Microbiology and Infectious Diseases 2019, 25, 839-844.

Tacconelli E, Mazzaferri F, de Smet AM, Bragantini D, Eggimann P, Huttner BD, Kuijper EJ, Lucet JC, Mutters NT, Sanguinetti M, Schwaber MJ, Souli M, Torre-Cisneros J, Price JR, Rodríguez-Baño J
ESCMID-EUCIC clinical guidelines on decolonization of multidrug-resistant Gram-negative bacteria carriers.
Clinical Microbiology and Infection: The Official Publication of the European Society of Clinical Microbiology and Infectious Diseases 2019, 25, 807-817.

Ferré V, Ekouevi D, Gbeasor-Komlanvi F, Collin G, Le Hingrat Q, Tchounga B, Salou M, Descamps D, Charpentier C, Dagnra A
Prevalence of human papillomavirus, human immunodeficiency virus and other sexually transmitted infections among female sex workers in Togo: a national cross-sectional survey.
Clinical Microbiology and Infection 2019, 25, 1560.e1-1560.e7.

Forestier E, Roubaud-Baudron C, Fraisse T, Patry C, Gavazzi G, Hoen B, Carauz-Paz P, Moheb-Khosravi B, Delahaye F, Sost G, Paccalin M, Nazeyrollas P, Strady C, Alla F, Selton-Suty C, AEPEI and the GInGer Elderl-IE study group, AEPEI and the GInGer Elderl-IE study group
Comprehensive geriatric assessment in older patients suffering from infective endocarditis. A prospective multicentric cohort study.
Clinical Microbiology and Infection: The Official Publication of the European Society of Clinical Microbiology and Infectious Diseases 2019, 25, 1246-1252.

Royer G, Melloul E, Roisin L, Courbin V, Jacquier H, Lepeule R, Coutte L, Darty M, Fihman V, Lim P, Decousser JW, Rodriguez C, Woerther PL
Complete genome sequencing of Enterococcus faecalis strains suggests role of Ebp deletion in infective endocarditis relapse.
Clinical Microbiology and Infection: The Official Publication of the European Society of Clinical Microbiology and Infectious Diseases 2019, 25, 1565-1567.

Schweitzer VA, van Werkhoven CH, Rodríguez Baño J, Bielicki J, Harbarth S, Hulscher M, Huttner B, Islam J, Little P, Pulcini C, Savoldi A, Tacconelli E, Timsit JF, van Smeden M, Wolkewitz M, Bonten MJM, Walker AS, Llewelyn MJ, Joint Programming Initiative on Antimicrobial Resistance (JPIAMR) Working Group on Design of Antimicrobial Stewardship Evaluations
Optimizing design of research to evaluate antibiotic stewardship interventions: consensus recommendations of a multinational working group.
Clinical Microbiology and Infection: The Official Publication of the European Society of Clinical Microbiology and Infectious Diseases 2019

Fantin B, Poujade J, Grégoire N, Chau F, Roujansky A, Kieffer N, Berleur M, Couet W, Nordmann P
The inoculum effect of Escherichia coli expressing mcr-1 or not on colistin activity in a murine model of peritonitis.
Clinical Microbiology and Infection: The Official Publication of the European Society of Clinical Microbiology and Infectious Diseases 2019, 25, 1563.e5-1563.e8.

Ghazali DA, Kenway P, Clery R, Choquet C, Casalino E
A multicenter randomized control trial evaluating professional practice assessment of patient pain management after simulation training course: Study protocol.
Contemporary Clinical Trials Communications 2019, 14, 100331.

Bastard JP, Couffignal C, Fellahi S, Bard JM, Mentre F, Salmon D, Katlama C, Raffi F, Leport C, Capeau J, ANRS CO, APROCO-COPILOTE Cohort study group
Diabetes and dyslipidaemia are associated with oxidative stress independently of inflammation in long-term antiretroviral-treated HIV-infected patients.
Diabetes & Metabolism 2019, 45, 573-581.

Rodrigues C, Chiron C, Ounissi M, Dulac O, Gaillard S, Nabbout R, Jullien V
Pharmacokinetic evaluation of vigabatrin dose for the treatment of refractory focal seizures in children using adult and pediatric data.
Epilepsy Research 2019, 150, 38-45.

Casalino E, Kenway P, Bouzid D, Goncalves S, Antoniol S, Radou L, Choquet C, Macaux M, Ghazali DA
Implementation of HIV-exposures triage strategy in emergency departments to improve nurse-triage for HIV-exposures: A pre- and post-intervention period study.
International Emergency Nursing 2019, 47, 100786.

Nguyen T, Akhavan S, Caby F, Bonyhay L, Larrouy L, Gervais A, Lebray P, Poynard T, Calmus Y, Simon A, Valantin MA, Calvez V, Marcelin AG, Todesco E
Net emergence of substitutions at position 28 in NS5A of hepatitis C virus genotype 4 in patients failing direct-acting antivirals detected by next-generation sequencing.
International Journal of Antimicrobial Agents 2019, 53, 80-83.

Pilmis B, Lourtet-Hascoët J, Barraud O, Piau C, Isnard C, Hery-Arnaud G, Amara M, Merens A, Farfour E, Thomas E, Jacquier H, Zahar JR, Bonnet E, Monnier AL, Cattoir V, Corvec S, Boutoille D, de Ponfilly GP, Reissier S, GMC Study Group
Be careful about MICs to amoxicillin for patients with Streptococci-related infective endocarditis.
International Journal of Antimicrobial Agents 2019, 53, 850-854.

Rouzet F, Iung B, Duval X
18F-FDG PET/CT in Infective Endocarditis: New Perspectives for Improving Patient Management.
Journal of the American College of Cardiology 2019, 74, 1041-1043.

Martin-Loeches I, Timsit JF, Leone M, de Waele J, Sartelli M, Kerrigan S, Azevedo LCP, Einav S
Clinical controversies in abdominal sepsis. Insights for critical care settings.
Journal of Critical Care 2019, 53, 53-58.

Mauri T, Carlesso E, Spinelli E, Turrini C, Corte FD, Russo R, Ricard JD, Pesenti A, Roca O, Grasselli G
Increasing support by nasal high flow acutely modifies the ROX index in hypoxemic patients: A physiologic study.
Journal of Critical Care 2019, 53, 183-185.

Bouziane F, Allem R, Sebaihia M, Kumanski S, Mougari F, Sougakoff W, Raskine L, Yala D, Cambau E, CNR-MyRMA
First genetic characterisation of multidrug-resistant Mycobacterium tuberculosis isolates from Algeria.
Journal of Global Antimicrobial Resistance 2019, 19, 301-307.

Saliba R, Neulier C, Seytre D, Fiacre A, Faibis F, Leduc P, Amara M, Jauréguy F, Carbonnelle E, Zahar JR, Marty L
Can real-time polymerase chain reaction allow a faster recovery of hospital activity in cases of an incidental discovery of carbapenemase-producing Enterobacteriaceae and vancomycin-resistant Enterococci carriers?.
Journal of Hospital Infection 2019, 103, 115-120.

Mageau A, Sacré K, Perozziello A, Ruckly S, Dupuis C, Bouadma L, Papo T, Timsit JF
Septic shock among patients with systemic lupus erythematosus: short and long-term outcome. Analysis of a French nationwide database.
The Journal of Infection 2019

de Montmollin E, Ruckly S, Schwebel C, Philippart F, Adrie C, Mariotte E, Marcotte G, Cohen Y, Sztrymf B, da Silva D, Bruneel F, Gainnier M, Garrouste-Orgeas M, Sonneville R, Timsit JF, OUTCOMEREA Study Group
Pneumonia in acute ischemic stroke patients requiring invasive ventilation: Impact on short and long-term outcomes.
The Journal of Infection 2019, 79, 220-227.

Boukobza M, Duval X, Laissy JP
Mycotic intracranial aneurysms rupture presenting as pure acute subdural hematoma in infectious endocarditis. Report of 2 cases and review of the literature.
Journal of Clinical Neuroscience: Official Journal of the Neurosurgical Society of Australasia 2019, 62, 222-225.

Magréault S, Leroux S, Touati J, Storme T, Jacqz-Aigrain E
UPLC/MS/MS assay for the simultaneous determination of seven antibiotics in human serum-Application to pediatric studies.
Journal of Pharmaceutical and Biomedical Analysis 2019, 174, 256-262.

Levy C, Ouldali N, Caeymaex L, Angoulvant F, Varon E, Cohen R
Diversity of Serotype Replacement After Pneumococcal Conjugate Vaccine Implementation in Europe.
The Journal of Pediatrics 2019, 213, 252-253.e3.

Sokal A, Sauvanet A, Fantin B, de Lastours V
Acute cholangitis: Diagnosis and management.
Journal of Visceral Surgery 2019

Ville S, Ydee A, Garandeau C, Canet E, Tissot A, Cantarovich D, Frémeaux-Bacchi V, Mariani-Kurkdjian P, Provôt F, Fakhouri F
Shiga toxin-producing Escherichia coli-associated hemolytic uremic syndrome in solid organ transplant recipients.
Kidney International 2019, 96, 1423-1424.

Duval X, Millot S, Tubiana S, Iung B
[Prevention of Infective endocarditis].
Presse Medicale (Paris, France: 1983) 2019, 48, 556-562.

Lattuca-Truc M, Timsit JF, Levra MG, Ruckly S, Villa J, Dumas I, Pinsolle J, Ferrer L, Guillem P, Moro-Sibilot D, Toffart AC
Trends in response rate and survival in small-cell lung cancer patients between 1997 and 2017.
Lung Cancer 2019, 131, 122-127.

Pugliese P, Joly V, Valantin M, Cotte L, Huleux T, Allavena C, Reynes J, Poizot-Martin I, Bani-Sadr F, Cuzin L
Which antiretrovirals should be prescribed as first-line treatments? Changes over the past 10 years in France.
Médecine et Maladies Infectieuses 2019, 49, 264-269.

Dutertre M, Delobel P, Marchou B, Boyer JF, Mougari F, Martin-Blondel G
Olecranon bursitis secondary to Mycobacterium europaeum infection in a patient receiving immunosuppressive drugs for rheumatoid arthritis..
Medecine et maladies infectieuses 2019, 49, 358-359.

Hoen B, Varon E, Debroucker T, Fantin B, Grimprel E, Wolff M, Duval X, expert and reviewing groups
Management of acute community-acquired bacterial meningitis (excluding newborns). Short text.
Medecine Et Maladies Infectieuses 2019, 49, 367-404.

Hoen B, Varon E, de Debroucker T, Fantin B, Grimprel E, Wolff M, Duval X, expert and reviewing group
Management of acute community-acquired bacterial meningitis (excluding newborns). Long version with arguments.
Medecine Et Maladies Infectieuses 2019, 49, 405-441.

Gagneux-Brunon A, Pouvaret A, Maillard N, Berthelot P, Lutz MF, Cazorla C, Tulane C, Fuzellier JF, Verhoeven PO, Frésard A, Duval X, Lucht F, Botelho-Nevers E
Acute kidney injury in infective endocarditis: A retrospective analysis.
Medecine Et Maladies Infectieuses 2019, 49, 527-533.

Gocko X, Lenormand C, Lemogne C, Bouiller K, Gehanno JF, Rabaud C, Perrot S, Eldin C, de Broucker T, Roblot F, Toubiana J, Sellal F, Vuillemet F, Sordet C, Fantin B, Lina G, Sobas C, Jaulhac B, Figoni J, Chirouze C, Hansmann Y, Hentgen V, Caumes E, Dieudonné M, Picone O, Bodaghi B, Gangneux JP, Degeilh B, Partouche H, Saunier A, Sotto A, Raffetin A, Monsuez JJ, Michel C, Boulanger N, Cathebras P, Tattevin P, endorsed by the following scientific societies
Lyme borreliosis and other tick-borne diseases. Guidelines from the French scientific societies.
Medecine Et Maladies Infectieuses 2019, 49, 296-317.

Delchier JC, Bastuji-Garin S, Raymond J, Megraud F, Amiot A, Cambau E, Burucoa C, HELICOSTIC Study Group
Efficacy of a tailored PCR-guided triple therapy in the treatment of Helicobacter pylori infection.
Medecine Et Maladies Infectieuses 2019

Delaigue S, Signolet I, Consigny PH, de Gentile L, D'Ortenzio E, Gautret P, Sorge F, Strady C, Bouchaud O
New guidelines for the prevention of imported malaria in France.
Medecine Et Maladies Infectieuses 2019

Conceição EC, Refregier G, Gomes HM, Olessa-Daragon X, Coll F, Ratovonirina NH, Rasolofo-Razanamparany V, Lopes ML, van Soolingen D, Rutaihwa L, Gagneux S, Bollela VR, Suffys PN, Duarte RS, Lima KVB, Sola C
Mycobacterium tuberculosis lineage 1 genetic diversity in Pará, Brazil, suggests common ancestry with east-African isolates potentially linked to historical slave trade..
Infection, genetics and evolution : journal of molecular epidemiology and evolutionary genetics in infectious diseases 2019, 73, 337-341.

Ruppé E, Schrenzel J
Messages from the third International Conference on Clinical Metagenomics (ICCMg3).
Microbes and Infection 2019

Peiffer-Smadja N, Harent S, Messeca C, Lechapt-Zalcman E, Yazdanpanah Y, Joly V
A case of thoracic actinomycosis presenting as sudden paraplegia.
Revue Neurologique 2019, 175, 89-92.

Méchaï F, Bouchaud O
Tuberculous meningitis: Challenges in diagnosis and management.
Revue Neurologique 2019, 175, 451-457.

Jolivet S, Lucet JC
Surgical field and skin preparation.
Orthopaedics & Traumatology: Surgery & Research 2019, 105, S1-S6.

De Stefano C, Akodad H, Gauducheau H, Reuter PG, Ricard JD, Petrovic T, Adnet F, Truchot J, Lapostolle F
Role of Student Nurse in the Prehospital Medical Teams Responding to the Scene of A Terrorist Attack in France.
Nursing Outlook 2019, 67, 441-449.

Philippon A, Jacquier H, Ruppé E, Labia R
Structure-based classification of class A beta-lactamases, an update.
Current Research in Translational Medicine 2019, 67, 115-122.

Goulas A, Sertillanges N, Brimo K, Garnier P, Bergheaud V, Dumény V, Benoit P, Haudin CS
Environmental availability of sulfamethoxazole and its acetylated metabolite added to soils via sludge compost or bovine manure.
The Science of the Total Environment 2019, 651, 506-515.

Pistone T, Ouattara E, Gabillard D, Lele N, Duvignaud A, Cordel H, Malvy D, Bouchaud O, Abgrall S, ANRS VIHVO Study Group
Travel-related health events and their risk factors in HIV-infected sub-Saharan migrants living in France and visiting their native country: The ANRS VIHVO cohort study.
Travel Medicine and Infectious Disease 2019

Le Hingrat Q, Perrier M, Charpentier C, Jacquot A, Houhou-Fidouh N, Descamps D, Visseaux B
Was Zika introduced to Brazil by participants at the 2013 Beach Soccer World Cup held in Tahiti: A phylogeographical analysis.
Travel Medicine and Infectious Disease 2019, 101512.

Billard-Pomares T, Bleibtreu A, Walewski V, Dziri S, Barbat A, Zahar JR, Cruaud P, Carbonnelle E
Proposition of a safe Mycobacterium tuberculosis complex denaturation method that does not compromise the integrity of DNA for whole-genome sequencing.
Tuberculosis 2019, 117, 62-64.

Mullane KM, Morrison VA, Camacho LH, Arvin A, McNeil SA, Durrand J, Campbell B, Su SC, Chan ISF, Parrino J, Kaplan SS, Popmihajlov Z, Annunziato PW, V212 Protocol 011 Trial Team
Safety and efficacy of inactivated varicella zoster virus vaccine in immunocompromised patients with malignancies: a two-arm, randomised, double-blind, phase 3 trial.
The Lancet. Infectious Diseases 2019, 19, 1001-1012.

Kollef MH, Nováček M, Kivistik Ü, Réa-Neto Á, Shime N, Martin-Loeches I, Timsit JF, Wunderink RG, Bruno CJ, Huntington JA, Lin G, Yu B, Butterton JR, Rhee EG
Ceftolozane-tazobactam versus meropenem for treatment of nosocomial pneumonia (ASPECT-NP): a randomised, controlled, double-blind, phase 3, non-inferiority trial.
The Lancet. Infectious Diseases 2019

Lucet JC, Zahar JR
Simplified control measures for ESBL-producing Enterobacteriacae?.
The Lancet. Infectious Diseases 2019, 19, 1036-1037.

Frat JP, Ricard JD, Quenot JP, Pichon N, Demoule A, Forel JM, Mira JP, Coudroy R, Berquier G, Voisin B, Colin G, Pons B, Danin PE, Devaquet J, Prat G, Clere-Jehl R, Petitpas F, Vivier E, Razazi K, Nay MA, Souday V, Dellamonica J, Argaud L, Ehrmann S, Gibelin A, Girault C, Andreu P, Vignon P, Dangers L, Ragot S, Thille AW, FLORALI-2 study group, REVA network
Non-invasive ventilation versus high-flow nasal cannula oxygen therapy with apnoeic oxygenation for preoxygenation before intubation of patients with acute hypoxaemic respiratory failure: a randomised, multicentre, open-label trial.
The Lancet. Respiratory Medicine 2019, 7, 303-312.

Frat JP, Ricard JD, Ragot S, Thille AW
Preoxygenation before intubation in severe hypoxaemic respiratory failure-a step too far for high-flow nasal cannula? - Authors' reply..
The Lancet. Respiratory medicine 2019, 7, e18.

Wohl DA, Yazdanpanah Y, Baumgarten A, Clarke A, Thompson MA, Brinson C, Hagins D, Ramgopal MN, Antinori A, Wei X, Acosta R, Collins SE, Brainard D, Martin H
Bictegravir combined with emtricitabine and tenofovir alafenamide versus dolutegravir, abacavir, and lamivudine for initial treatment of HIV-1 infection: week 96 results from a randomised, double-blind, multicentre, phase 3, non-inferiority trial.
The lancet. HIV 2019, 6, e355-e363.

Le Hingrat Q, Charpentier C, Ghosn J, Thiébaut R, Peytavin G, Descamps D, Matheron S
New insights are game-changers in HIV-2 disease management.
The lancet. HIV 2019, 6, e214.

Eholie SP, Moh R, Benalycherif A, Gabillard D, Ello F, Messou E, Zoungrana J, Diallo I, Diallo M, Bado G, Cisse M, Maiga AI, Anzian A, Toni Td, Congo-Ouedraogo M, Toure-Kane C, Seydi M, Minta DK, Sawadogo A, Sangaré L, Drabo J, Karcher S, Le Carrou J, de Monteynard LA, Peytavin G, Gabassi A, Girard PM, Chaix ML, Anglaret X, Landman R, Thilao ANRS 12269 Study Group
Implementation of an intensive adherence intervention in patients with second-line antiretroviral therapy failure in four west African countries with little access to genotypic resistance testing: a prospective cohort study.
The lancet. HIV 2019, 6, e750-e759.

Vincent A, Bonacorsi S, Varon E, Dauger S, Levy M
Serotype 14 pneumococcal bacteremia: From one neonate to another in a pediatric intensive care unit.
Infection Control and Hospital Epidemiology 2019, 40, 952-953.

Birgand G, Azevedo C, Rukly S, Pissard-Gibollet R, Toupet G, Timsit JF, Lucet JC, the ARIBO Study Group
Motion-capture system to assess intraoperative staff movements and door openings: Impact on surrogates of the infectious risk in surgery.
Infection Control & Hospital Epidemiology 2019, 40, 566-573.

Couce A, Tenaillon O
Mutation bias and GC content shape antimutator invasions.
Nature Communications 2019, 10, 3114.

Vieillard V, Combadière B, Tubiana R, Launay O, Pialoux G, Cotte L, Girard PM, Simon A, Dudoit Y, Reynes J, Rockstroh J, Garcia F, Gatell J, Devidas A, Yazdanpanah Y, Weiss L, Fätkenheuer G, Autran B, Joyeux D, Gharakhanian S, Debré P, Katlama C
HIV therapeutic vaccine enhances non-exhausted CD4+ T cells in a randomised phase 2 trial.
NPJ vaccines 2019, 4, 25.

Rapacciuolo G, Graham CH, Marin J, Behm JE, Costa GC, Hedges SB, Helmus MR, Radeloff VC, Young BE, Brooks TM
Species diversity as a surrogate for conservation of phylogenetic and functional diversity in terrestrial vertebrates across the Americas..
Nature ecology & evolution 2019, 3, 53-61.

Ruppé E, Ghozlane A, Tap J, Pons N, Alvarez AS, Maziers N, Cuesta T, Hernando-Amado S, Clares I, Martínez JL, Coque TM, Baquero F, Lanza VF, Máiz L, Goulenok T, de Lastours V, Amor N, Fantin B, Wieder I, Andremont A, van Schaik W, Rogers M, Zhang X, Willems RJL, de Brevern AG, Batto JM, Blottière HM, Léonard P, Léjard V, Letur A, Levenez F, Weiszer K, Haimet F, Doré J, Kennedy SP, Ehrlich SD
Prediction of the intestinal resistome by a three-dimensional structure-based method.
Nature Microbiology 2019, 4, 112-123.

Iung B, Duval X
Infective endocarditis: innovations in the management of an old disease.
Nature Reviews. Cardiology 2019, 16, 623-635.

Coppée R, Jeffares DC, Miteva MA, Sabbagh A, Clain J
Comparative structural and evolutionary analyses predict functional sites in the artemisinin resistance malaria protein K13.
Scientific Reports 2019, 9, 10675.

d'Humières C, Touchon M, Dion S, Cury J, Ghozlane A, Garcia-Garcera M, Bouchier C, Ma L, Denamur E, P C Rocha E
A simple, reproducible and cost-effective procedure to analyse gut phageome: from phage isolation to bioinformatic approach.
Scientific Reports 2019, 9, 11331.

Assi A, Abu Zaki S, Ghosn J, Kinge N, Naous J, Ghanem A, Abou Abbas D, Bakouny Z, Azzi G, Tomb R
Prevalence of HIV and other sexually transmitted infections and their association with sexual practices and substance use among 2238 MSM in Lebanon.
Scientific Reports 2019, 9, 15142.

Guernier-Cambert V, Diefenbach-Elstob T, Klotoe BJ, Burgess G, Pelowa D, Dowi R, Gula B, McBryde ES, Refrégier G, Rush C, Sola C, Warner J
Diversity of Mycobacterium tuberculosis in the Middle Fly District of Western Province, Papua New Guinea: microbead-based spoligotyping using DNA from Ziehl-Neelsen-stained microscopy preparations..
Scientific reports 2019, 9, 15549.

Rossi NA, El Meouche I, Dunlop MJ
Forecasting cell fate during antibiotic exposure using stochastic gene expression.
Communications Biology 2019, 2, 259.

Rossi NA, El Meouche I, Dunlop MJ
Erratum: Author Correction: Forecasting cell fate during antibiotic exposure using stochastic gene expression..
Communications biology 2019, 2, 330.

Buetti N, Timsit JF
Management and Prevention of Central Venous Catheter-Related Infections in the ICU.
Seminars in Respiratory and Critical Care Medicine 2019, 40, 508-523.

Kernéis S, Lucet JC
Controlling the Diffusion of Multidrug-Resistant Organisms in Intensive Care Units.
Seminars in Respiratory and Critical Care Medicine 2019, 40, 558-568.

NAMSAL ANRS 12313 Study Group, Kouanfack C, Mpoudi-Etame M, Omgba Bassega P, Eymard-Duvernay S, Leroy S, Boyer S, Peeters M, Calmy A, Delaporte E
Dolutegravir-Based or Low-Dose Efavirenz-Based Regimen for the Treatment of HIV-1.
The New England Journal of Medicine 2019, 381, 816-826.

Kania R, Vironneau P, Dang H, Bercot B, Cambau E, Verillaud B, Camous D, Lamers G, Herman P, Vicaut E, Tessier N, Van Den Abbeele T
Bacterial biofilm in adenoids of children with chronic otitis media. Part I: a case control study of prevalence of biofilms in adenoids, risk factors and middle ear biofilms.
Acta Oto-Laryngologica 2019, 139, 345-350.

Bellocq A, Gaspard W, Couffignal C, Vigan M, Guerder A, Ambard J, Caruana S, Similowski T, Garcia G, Taillé C
Outpatient pulmonary rehabilitation for severe asthma with fixed airway obstruction: Comparison with COPD.
The Journal of Asthma: Official Journal of the Association for the Care of Asthma 2019, 1-9.

Triki D, Fartek S, Visseaux B, Descamps D, Camproux AC, Regad L
Characterizing the structural variability of HIV-2 protease upon the binding of diverse ligands using a structural alphabet approach.
Journal of Biomolecular Structure & Dynamics 2019, 37, 4658-4670.

Douhnai D, Tassin M, Sibiude J, Franchi-Abella S, Ackermann O, Mandelbrot L, Picone O
Prenatal diagnosis of intra hepatic arterio venous fistula: case report and review of the literature.
The Journal of Maternal-Fetal & Neonatal Medicine: The Official Journal of the European Association of Perinatal Medicine, the Federation of Asia and Oceania Perinatal Societies, the International Society of Perinatal Obstetricians 2019, 32, 2575-2578.

Tauzin M, Ouldali N, Béchet S, Caeymaex L, Cohen R
Pharmacokinetic and pharmacodynamic considerations of cephalosporin use in children.
Expert Opinion on Drug Metabolism & Toxicology 2019, 15, 869-880.

Leo S, Lazarevic V, Gaïa N, Estellat C, Girard M, Matheron S, Armand-Lefèvre L, Andremont A, Schrenzel J, Ruppé E
The intestinal microbiota predisposes to traveler's diarrhea and to the carriage of multidrug-resistant Enterobacteriaceae after traveling to tropical regions.
Gut Microbes 2019, 10, 631-641.

Gardette M, Le Hello S, Mariani-Kurkdjian P, Fabre L, Gravey F, Garrivier A, Loukiadis E, Jubelin G
Identification and prevalence of in vivo-induced genes in enterohaemorrhagic Escherichia coli.
Virulence 2019, 10, 180-193.

Canouï E, Zarrouk V, Canouï-Poitrine F, Desmoulin U, Leflon V, Allaham W, de Lastours V, Guigui P, Fantin B
Surgery is safe and effective when indicated in the acute phase of hematogenous pyogenic vertebral osteomyelitis.
Infectious Diseases (London, England) 2019, 51, 268-276.

Parisey M, Louni F, Bouvet E, Landman R, Charpentier C, Lariven S, Joly V, Villemant A, Mackoumbou-Nkouka C, Yazdanpanah Y, Burdet C
HIV Infection in North African Patients.
AIDS research and human retroviruses 2019, 35, 628-633.

Bonnet B, Blum L, Charpentier C, Martres P, Ritvo PG, Autran B, Guihot A
Short Communication: Extremely Severe CD4 Lymphopenia During HIV-1 Primary Infection.
AIDS Research and Human Retroviruses 2019, 35, 930-933.

Lescat M, Poirel L, Jayol A, Nordmann P
Performances of the Rapid Polymyxin Acinetobacter and Pseudomonas Tests for Colistin Susceptibility Testing.
Microbial Drug Resistance (Larchmont, N.Y.) 2019, 25, 520-523.

Mansour W, Grami R, Jaidane N, Messaoudi A, Charfi K, Ben Romdhane L, Bel Haj Khalifa A, Khedher M, Boujaafar N, Bouallègue O, Mammeri H
Epidemiology and Whole-Genome Analysis of NDM-1-Producing Klebsiella pneumoniae KP3771 from Tunisia.
Microbial Drug Resistance (Larchmont, N.Y.) 2019, 25, 644-651.

Cousien A, Abel S, Monthieux A, Andronico A, Calmont I, Cervantes M, Césaire R, Gallian P, de Lamballerie X, Laouénan C, Najioullah F, Pierre-François S, Pircher M, Salje H, Ten Bosch QA, Cabié A, Cauchemez S
Assessing Zika Virus Transmission Within Households During an Outbreak in Martinique, 2015-2016.
American Journal of Epidemiology 2019, 188, 1389-1396.

Ferré VM, Gbeasor-Komlanvi FA, Collin G, Dagnra AC, Le Hingrat Q, Jaquet A, Salou M, Descamps D, Charpentier C, Ekouevi DK
Prevalence of Human Papillomavirus, Human Immunodeficiency Virus, and Other Sexually Transmitted Infections Among Men Who Have Sex With Men in Togo: A National Cross-sectional Survey.
Clinical Infectious Diseases: An Official Publication of the Infectious Diseases Society of America 2019, 69, 1019-1026.

Meier MA, Branche A, Neeser OL, Wirz Y, Haubitz S, Bouadma L, Wolff M, Luyt CE, Chastre J, Tubach F, Christ-Crain M, Corti C, Jensen JUS, Deliberato RO, Kristoffersen KB, Damas P, Nobre V, Oliveira CF, Shehabi Y, Stolz D, Tamm M, Mueller B, Schuetz P
Procalcitonin-guided Antibiotic Treatment in Patients With Positive Blood Cultures: A Patient-level Meta-analysis of Randomized Trials.
Clinical Infectious Diseases 2019, 69, 388-396.

Le Hingrat Q, Collin G, Lê M, Peytavin G, Visseaux B, Bertine M, Tubiana R, Karmochkine M, Valin N, Collin F, Lemaignen A, Bernard L, Damond F, Matheron S, Descamps D, Charpentier C, FNAfRoAaVH(CH2C
A New Mechanism of Resistance of Human Immunodeficiency Virus Type 2 to Integrase Inhibitors: A 5-Amino-Acid Insertion in the Integrase C-Terminal Domain.
Clinical Infectious Diseases: An Official Publication of the Infectious Diseases Society of America 2019, 69, 657-667.

Le Hingrat Q, Collin G, Lê M, Peytavin G, Visseaux B, Bertine M, Tubiana R, Karmochkine M, Valin N, Collin F, Lemaignen A, Bernard L, Damond F, Matheron S, Descamps D, Charpentier C, French National Agency for Research on AIDS and Viral Hepatitis (ANRS) CO5 HIV-2 Cohort
A New Mechanism of Resistance of Human Immunodeficiency Virus Type 2 to Integrase Inhibitors: A 5-Amino-Acid Insertion in the Integrase C-Terminal Domain.
Clinical Infectious Diseases: An Official Publication of the Infectious Diseases Society of America 2019, 69, 657-667.

Tazi A, Plainvert C, Anselem O, Ballon M, Marcou V, Seco A, El Alaoui F, Joubrel C, El Helali N, Falloukh E, Frigo A, Raymond J, Trieu-Cuot P, Branger C, Le Monnier A, Azria E, Ancel PY, Jarreau PH, Mandelbrot L, Goffinet F, Poyart C
Risk Factors for Infant Colonization by Hypervirulent CC17 Group B Streptococcus: Toward the Understanding of Late-onset Disease.
Clinical Infectious Diseases: An Official Publication of the Infectious Diseases Society of America 2019, 69, 1740-1748.

Weiss E, Zahar JR, Alder J, Asehnoune K, Bassetti M, Bonten MJM, Chastre J, De Waele J, Dimopoulos G, Eggimann P, Engelhardt M, Ewig S, Kollef M, Lipman J, Luna C, Martin-Loeches I, Pagani L, Palmer LB, Papazian L, Poulakou G, Prokocimer P, Rello J, Rex JH, Shorr AF, Talbot GH, Thamlikitkul V, Torres A, Wunderink RG, Timsit JF
Elaboration of Consensus Clinical Endpoints to Evaluate Antimicrobial Treatment Efficacy in Future Hospital-acquired/Ventilator-associated Bacterial Pneumonia Clinical Trials.
Clinical Infectious Diseases 2019, 69, 1912-1918.

Dinh A, Hallouin-Bernard MC, Davido B, Lemaignen A, Bouchand F, Duran C, Even A, Denys P, Perrouin-Verbe B, Sotto A, Lavigne JP, Bruyère F, Grall N, Tavernier E, Bernard L
Weekly sequential antibioprophylaxis for recurrent UTI among patients with neurogenic bladder: a randomized controlled trial.
Clinical Infectious Diseases: An Official Publication of the Infectious Diseases Society of America 2019

Hage-Sleiman M, Tremeaux P, Fillion M, Boufassa F, Melard A, Gardiennet E, Mariaggi AA, Plantier JC, Rouzioux C, Lambotte O, Avettand-Fenoel V, CODEX ANRS Cohort Study Group
False-negative Results of Human Immunodeficiency Virus (HIV) Rapid Testing in HIV Controllers.
Clinical Infectious Diseases: An Official Publication of the Infectious Diseases Society of America 2019

Habib G, Lancellotti P, Erba PA, Sadeghpour A, Meshaal M, Sambola A, Furnaz S, Citro R, Ternacle J, Donal E, Cosyns B, Popescu B, Iung B, Prendergast B, Laroche C, Tornos P, Pazdernik M, Maggioni A, Gale CP, EURO-ENDO Investigators
The ESC-EORP EURO-ENDO (European Infective Endocarditis) registry.
European Heart Journal. Quality of Care & Clinical Outcomes 2019, 5, 202-207.

Iung B, Tubiana S, Duval X
Towards an increased awareness on infective endocarditis in patients with bloodstream infections: a role for multivariate scores?.
European Heart Journal 2019, 40, 3245-3247.

Habib G, Erba PA, Iung B, Donal E, Cosyns B, Laroche C, Popescu BA, Prendergast B, Tornos P, Sadeghpour A, Oliver L, Vaskelyte JJ, Sow R, Axler O, Maggioni AP, Lancellotti P, EURO-ENDO Investigators
Clinical presentation, aetiology and outcome of infective endocarditis. Results of the ESC-EORP EURO-ENDO (European infective endocarditis) registry: a prospective cohort study.
European Heart Journal 2019, 40, 3222-3232.

Le Roux E, Mellerio H, Jacquin P, Bourmaud A, Guilmin-Crépon S, Faye A, Matheron S, Boulkedid R, Alberti C
Practical generic guidelines for paediatric-to-adult transition for adolescents with chronic disease.
European Journal of Public Health 2019, 29, 442-448.

Ngo-Giang-Huong N, Huynh THK, Dagnra AY, Toni Td, Maiga AI, Kania D, Eymard-Duvernay S, Peeters M, Soulie C, Peytavin G, Rekacewicz C, Chaix ML, Aghokeng AF, ANRS 12333 Study Group, Aghokeng AF, Ayouba A, Brun-Vézinet F, Chaix ML, Calvez V, Dagnra A, Descamps D, Dramane K, Fournier I, Maiga A, de Monteynard LA, Nouhin J, Kane CT, Lien TX, Ngo-Giang-Huong N, Peeters M, Plantier JC, Njouom R, Tuaillon E, Rekacewicz C, d’Aquin TT, Poda A, Zougrana J, Ouedraogo S, Ouedraogo M, Djeuda AD, Kouanfack C, Mandeng N, Mpoudi-Ngole E, Messou E, Jacques DJ, Nguessan JF, Dolo O, Diarra Z, Cisse M, Patassi A, Salou M, Ali-Edjé K, Bowonwatanuwong C, Thongpaen S, Klinbuayaem V, Laomanit L, Luong QA, Tran T
Prevalence of pretreatment HIV drug resistance in West African and Southeast Asian countries.
Journal of Antimicrobial Chemotherapy 2019, 74, 462-467.

Soulie C, Santoro MM, Charpentier C, Storto A, Paraskevis D, Di Carlo D, Gennari W, Sterrantino G, Zazzi M, Perno CF, Calvez V, Descamps D, Ceccherini-Silberstein F, Marcelin AG
Rare occurrence of doravirine resistance-associated mutations in HIV-1-infected treatment-naive patients.
The Journal of Antimicrobial Chemotherapy 2019, 74, 614-617.

Joly V, Burdet C, Landman R, Vigan M, Charpentier C, Katlama C, Cabié A, Benalycherif A, Peytavin G, Yeni P, Mentre F, Argoud AL, Amri I, Descamps D, Yazdanpanah Y, LAMIDOL Study Group
Dolutegravir and lamivudine maintenance therapy in HIV-1 virologically suppressed patients: results of the ANRS 167 trial (LAMIDOL).
The Journal of Antimicrobial Chemotherapy 2019, 74, 739-745.

Alexandre K, Soares A, Chau F, Fantin B, Caron F, Etienne M
Temocillin breakpoints in pyelonephritis: evaluation in a murine model due to ESBL-producing Escherichia coli clinical isolates.
The Journal of Antimicrobial Chemotherapy 2019, 74, 1323-1326.

Delagreverie HM, Grude M, Lambert-Niclot S, Nere ML, Jadand C, Leport C, Raffi F, Ghislain M, Goujard C, Meyer L, Calvez V, Katlama C, Flandre P, Barin F, Delaugerre C
Anti-gp41 antibody levels reflect HIV viral suppression and cellular reservoir in long-term antiretroviral-treated trial participants.
The Journal of Antimicrobial Chemotherapy 2019, 74, 1389-1394.

Assoumou L, Bocket L, Pallier C, Grude M, Ait-Namane R, Izopet J, Raymond S, Charpentier C, Visseaux B, Wirden M, Trabaud MA, Le Guillou-Guillemette H, Allaoui C, Henquell C, Krivine A, Dos Santos G, Delamare C, Bouvier-Alias M, Montes B, Ferre V, De Monte A, Signori-Schmuck A, Maillard A, Morand-Joubert L, Tumiotto C, Fafi-Kremer S, Amiel C, Barin F, Marque-Juillet S, Courdavault L, Vallet S, Beby-Defaux A, de Rougemont A, Fenaux H, Avettand-Fenoel V, Allardet-Servent A, Plantier JC, Peytavin G, Calvez V, Chaix ML, Descamps D, ANRS AC-43 Resistance Study Group
Stable prevalence of transmitted drug resistance mutations and increased circulation of non-B subtypes in antiretroviral-naive chronically HIV-infected patients in 2015/2016 in France.
The Journal of Antimicrobial Chemotherapy 2019, 74, 1417-1424.

Assoumou L, Bocket L, Pallier C, Grude M, Ait-Namane R, Izopet J, Raymond S, Charpentier C, Visseaux B, Wirden M, Trabaud MA, Le Guillou-Guillemette H, Allaoui C, Henquell C, Krivine A, Dos Santos G, Delamare C, Bouvier-Alias M, Montes B, Ferre V, De Monte A, Signori-Schmuck A, Maillard A, Morand-Joubert L, Tumiotto C, Fafi-Kremer S, Amiel C, Barin F, Marque-Juillet S, Courdavault L, Vallet S, Beby-Defaux A, de Rougemont A, Fenaux H, Avettand-Fenoel V, Allardet-Servent A, Plantier JC, Peytavin G, Calvez V, Chaix ML, Descamps D, AA4RSG
Stable prevalence of transmitted drug resistance mutations and increased circulation of non-B subtypes in antiretroviral-naive chronically HIV-infected patients in 2015/2016 in France.
The Journal of Antimicrobial Chemotherapy 2019, 74, 1417-1424.

Marcelin AG, Grude M, Charpentier C, Bellecave P, Le Guen L, Pallier C, Raymond S, Mirand A, Bocket L, Fofana DB, Delaugerre C, Nguyen T, Montès B, Jeulin H, Mourez T, Fafi-Kremer S, Amiel C, Roussel C, Dina J, Trabaud MA, Le Guillou-Guillemette H, Vallet S, Signori-Schmuck A, Maillard A, Ferre V, Descamps D, Calvez V, Flandre P, AARG
Resistance to integrase inhibitors: a national study in HIV-1-infected treatment-naive and -experienced patients.
The Journal of Antimicrobial Chemotherapy 2019, 74, 1368-1375.

Marcelin AG, Grude M, Charpentier C, Bellecave P, Le Guen L, Pallier C, Raymond S, Mirand A, Bocket L, Fofana DB, Delaugerre C, Nguyen T, Montès B, Jeulin H, Mourez T, Fafi-Kremer S, Amiel C, Roussel C, Dina J, Trabaud MA, Le Guillou-Guillemette H, Vallet S, Signori-Schmuck A, Maillard A, Ferre V, Descamps D, Calvez V, Flandre P, ANRS AC43 Resistance Group
Resistance to integrase inhibitors: a national study in HIV-1-infected treatment-naive and -experienced patients.
The Journal of Antimicrobial Chemotherapy 2019, 74, 1368-1375.

Perrier M, Castain L, Regad L, Todesco E, Landman R, Visseaux B, Yazdanpanah Y, Rodriguez C, Joly V, Calvez V, Marcelin AG, Descamps D, Charpentier C
HIV-1 protease, Gag and gp41 baseline substitutions associated with virological response to a PI-based regimen.
The Journal of Antimicrobial Chemotherapy 2019, 74, 1679-1692.

Le Turnier P, Grégoire M, Garot D, Guimard T, Duval X, Bernard L, Boutoille D, Dailly É, Navas D, Asseray N
CSF concentration of ceftriaxone following high-dose administration: pharmacological data from two French cohorts.
The Journal of Antimicrobial Chemotherapy 2019, 74, 1753-1755.

Bourrel AS, Poirel L, Royer G, Darty M, Vuillemin X, Kieffer N, Clermont O, Denamur E, Nordmann P, Decousser JW, IAME Resistance Group
Colistin resistance in Parisian inpatient faecal Escherichia coli as the result of two distinct evolutionary pathways.
The Journal of Antimicrobial Chemotherapy 2019, 74, 1521-1530.

Mboumba Bouassa RS, Mossoro-Kpinde CD, Gody JC, Veyer D, Péré H, Matta M, Robin L, Grésenguet G, Charpentier C, Bélec L
High predictive efficacy of integrase strand transfer inhibitors in perinatally HIV-1-infected African children in therapeutic failure of first- and second-line antiretroviral drug regimens recommended by the WHO.
Journal of Antimicrobial Chemotherapy 2019, 74, 2030-2038.

Néant N, Solas C, Bouazza N, Lê MP, Yazdanpanah Y, Dhiver C, Bregigeon S, Mokhtari S, Peytavin G, Tamalet C, Descamps D, Lacarelle B, Gattacceca F
Concentration-response model of rilpivirine in a cohort of HIV-1-infected naive and pre-treated patients.
The Journal of Antimicrobial Chemotherapy 2019, 74, 1992-2002.

Castain L, Perrier M, Charpentier C, Palich R, Desire N, Wirden M, Descamps D, Sayon S, Landman R, Valantin MA, Joly V, Peytavin G, Yazdanpanah Y, Katlama C, Calvez V, Marcelin AG, Todesco E
New mechanisms of resistance in virological failure to protease inhibitors: selection of non-described protease, Gag and Gp41 mutations.
The Journal of Antimicrobial Chemotherapy 2019, 74, 2019-2023.

Perozziello A, Lescure FX, Truel A, Routelous C, Vaillant L, Yazdanpanah Y, Lucet JC, CEFECA study group
Prescribers' experience and opinions on antimicrobial stewardship programmes in hospitals: a French nationwide survey.
The Journal of Antimicrobial Chemotherapy 2019, 74, 2451-2458.

Siguier M, Mera R, Pialoux G, Ohayon M, Cotte L, Valin N, Ghosn J, Cua E, Pintado C, Chas J, Barriere G, Durand F, Molina JM
First year of pre-exposure prophylaxis implementation in France with daily or on-demand tenofovir disoproxil fumarate/emtricitabine.
Journal of Antimicrobial Chemotherapy 2019, 74, 2752-2758.

Katlama C, Assoumou L, Valantin MA, Soulié C, Martinez E, Béniguel L, Bouchaud O, Raffi F, Molina JM, Fellahi S, Peytavin G, Marcelin AG, Kolta S, Capeau J, Gibowski S, Cardon F, Reynes J, Costagliola D, the members of the ANRS 163 ETRAL study, Bernard L, Bottero J, Bouchaud O, Chidiac C, Duvivier C, Goujard C, delMarGutiérrez M, Martinez E, Molina JM, Morlat P, Naqvi A, Podzamczer D, Poizot-Martin I, Raffi F, Reynes J, Salmon-Céron D, Simon A, Valantin MA, Weiss L, Yazdanpanah Y
Dual therapy combining raltegravir with etravirine maintains a high level of viral suppression over 96 weeks in long-term experienced HIV-infected individuals over 45 years on a PI-based regimen: results from the Phase II ANRS 163 ETRAL study.
Journal of Antimicrobial Chemotherapy 2019, 74, 2742-2751.

Valantin MA, Durand L, Wirden M, Assoumou L, Caby F, Soulié C, Nguyen TTT, Tubiana R, Kirstetter M, Junot H, Marcelin AG, Peytavin G, Tilleul P, Katlama C
Antiretroviral drug reduction in highly experienced HIV-infected patients receiving a multidrug regimen: the ECOVIR study.
Journal of Antimicrobial Chemotherapy 2019, 74, 2716-2722.

Ouldali N, Cohen R, Levy C, Gelbert-Baudino N, Seror E, Corrard F, Vie Le Sage F, Michot AS, Romain O, Bechet S, Bonacorsi S, Angoulvant F, Varon E
Pneumococcal susceptibility to antibiotics in carriage: a 17 year time series analysis of the adaptive evolution of non-vaccine emerging serotypes to a new selective pressure environment.
The Journal of Antimicrobial Chemotherapy 2019, 74, 3077-3086.

Melo LC, Haenni M, Saras E, Duprilot M, Nicolas-Chanoine MH, Madec JY
Emergence of the C1-M27 cluster in ST131 Escherichia coli from companion animals in France.
The Journal of Antimicrobial Chemotherapy 2019, 74, 3111-3113.

Potard V, Canestri A, Gallien S, Costagliola D, French Hospital Database on HIV
Use of darunavir in HIV-1-infected individuals in routine clinical practice from 2012 to 2016 in France.
The Journal of Antimicrobial Chemotherapy 2019, 74, 3305-3314.

Peiffer-Smadja N, Guillotel E, Luque-Paz D, Maataoui N, Lescure FX, Cattoir V
In vitro bactericidal activity of amoxicillin combined with different cephalosporins against endocarditis-associated Enterococcus faecalis clinical isolates.
Journal of Antimicrobial Chemotherapy 2019, 74, 3511-3514.

Rockstroh JK, Yazdanpanah Y
HepCare Europe: a new user-friendly hepatitis C care service model. What have we learned? What are the remaining challenges?.
Journal of Antimicrobial Chemotherapy 2019, 74, v2-v4.

Tsopra R, Sedki K, Courtine M, Falcoff H, De Beco A, Madar R, Mechaï F, Lamy JB
Helping GPs to extrapolate guideline recommendations to patients for whom there are no explicit recommendations, through the visualization of drug properties. The example of AntibioHelp® in bacterial diseases.
Journal of the American Medical Informatics Association: JAMIA 2019, 26, 1010-1019.

Jung C, Amhis J, Levy C, Salabi V, Nacera B, Samia R, Bidet P, Aberrane S, Bonacorsi S, Cohen R
Group A Streptococcal Paronychia and Blistering Distal Dactylitis in Children: Diagnostic Accuracy of a Rapid Diagnostic Test and Efficacy of Antibiotic Treatment.
Journal of the Pediatric Infectious Diseases Society 2019

Toubiana J, Azarnoush S, Bouchez V, Landier A, Guillot S, Matczak S, Bonacorsi S, Brisse S
Bordetella parapertussis Bacteremia: Clinical Expression and Bacterial Genomics.
Open Forum Infectious Diseases 2019, 6, ofz122.

Gelé T, Furlan V, Taburet AM, Pallier C, Becker PH, Goujard C, Gasnault J, Barrail-Tran A, Chéret A
Dolutegravir Cerebrospinal Fluid Diffusion in HIV-1-Infected Patients with Central Nervous System Impairment.
Open Forum Infectious Diseases 2019, 6, ofz174.

Jacquier H, Fihman V, Amarsy R, Vicaut E, Bousson V, Cambau E, Crémieux AC, Delcey V, Hannouche D, Kaci R, Laredo JD, Meunier F, Nizard R, Ottaviani S, Parlier C, Richette P, Sellier P, Zadegan F, Lioté F, Berçot B, Molos Study Group
Benefits of Polymerase Chain Reaction Combined With Culture for the Diagnosis of Bone and Joint Infections: A Prospective Test Performance Study.
Open Forum Infectious Diseases 2019, 6, ofz511.

Dufour S, Piroth L, Chirouze C, Tattevin P, Becker A, Braquet P, Ferry T, Duval X, Le Moing V, VIRSTA/AEPEI Study Group
Staphylococcus aureus Bloodstream Infection in Patients With Prosthetic Joints in the Prospective VIRSTA Cohort Study: Frequency and Time of Occurrence of Periprosthetic Joint Infection.
Open Forum Infectious Diseases 2019, 6, ofz515.

Pham T, Serpa Neto A, Pelosi P, Laffey JG, De Haro C, Lorente JA, Bellani G, Fan E, Brochard LJ, Pesenti A, Schultz MJ, Artigas A, LUNG SAFE Investigators* and the European Society of Intensive Care Medicine Trials Group
Outcomes of Patients Presenting with Mild Acute Respiratory Distress Syndrome: Insights from the LUNG SAFE Study.
Anesthesiology 2019, 130, 263-283.

La Combe B, Ricard JD
Chlorhexidine Inefficacy in Ventilated Patients: Reply.
Anesthesiology 2019, 131, 939-940.

McIlroy PA, King RS, Garrouste-Orgeas M, Tabah A, Ramanan M
The Effect of ICU Diaries on Psychological Outcomes and Quality of Life of Survivors of Critical Illness and Their Relatives: A Systematic Review and Meta-Analysis.
Critical Care Medicine 2019, 47, 273-279.

Bertrand PM, Pereira B, Adda M, Timsit JF, Wolff M, Hilbert G, Gruson D, Garrouste-Orgeas M, Argaud L, Constantin JM, Chabanne R, Quenot JP, Bohe J, Guerin C, Papazian L, Jonquet O, Klouche K, Delahaye A, Riu B, Zieleskiewicz L, Darmon M, Azoulay E, Souweine B, Lautrette A
Disagreement Between Clinicians and Score in Decision-Making Capacity of Critically Ill Patients*:.
Critical Care Medicine 2019, 47, 337-344.

Ibn Saied W, Mourvillier B, Cohen Y, Ruckly S, Reignier J, Marcotte G, Siami S, Bouadma L, Darmon M, de Montmollin E, Argaud L, Kallel H, Garrouste-Orgeas M, Soufir L, Schwebel C, Souweine B, Glodgran-Toledano D, Papazian L, Timsit JF
A Comparison of the Mortality Risk Associated With Ventilator-Acquired Bacterial Pneumonia and Nonventilator ICU-Acquired Bacterial Pneumonia*:.
Critical Care Medicine 2019, 47, 345-352.

Bailly A, Ricard JD, Le Thuaut A, Helms J, Kamel T, Mercier E, Lemiale V, Colin G, Mira JP, Clere-Jehl R, Messika J, Dequin PF, Boulain T, Azoulay E, Champigneulle B, Reignier J, Lascarrou JB
Compared Efficacy of Four Preoxygenation Methods for Intubation in the ICU: Retrospective Analysis of McGrath Mac Videolaryngoscope Versus Macintosh Laryngoscope (MACMAN) Trial Data..
Critical care medicine 2019, 47, e340-e348.

Cantier M, Sabben C, Adle-Biassette H, Louedec L, Delbosc S, Desilles JP, Journé C, Diallo D, Ou P, Klein I, Chau F, Lefort A, Iung B, Duval X, Olivot JM, Ho-Tin-Noe B, Michel JB, Sonneville R, Mazighi M
Neurologic Complications of Infective Endocarditis: A Joint Model for a Septic Thromboembolism and Inflammatory Small Vessel Disease.
Critical Care Medicine 2019, 47, e685-e692.

Bourcier S, Coutrot M, Kimmoun A, Sonneville R, de Montmollin E, Persichini R, Schnell D, Charpentier J, Aubron C, Morawiec E, Bigé N, Nseir S, Terzi N, Razazi K, Azoulay E, Ferré A, Tandjaoui-Lambiotte Y, Ellrodt O, Hraiech S, Delmas C, Barbier F, Lautrette A, Aissaoui N, Repessé X, Pichereau C, Zerbib Y, Lascarrou JB, Carreira S, Reuter D, Frérou A, Peigne V, Fillatre P, Megarbane B, Voiriot G, Combes A, Schmidt M
Thyroid Storm in the ICU: A Retrospective Multicenter Study.
Critical Care Medicine 2019

Leverger G, Timsit JF, Milpied N, Gachot B
Use of Micafungin for the Prevention and Treatment of Invasive Fungal Infections in Everyday Pediatric Care in France: Results of the MYRIADE Study.
The Pediatric Infectious Disease Journal 2019, 38, 716-721.

Chosidow A, Bonacorsi S, Moissenet D, Bidet P, Schnuriger A, Grimprel E, Vialle R, Lorrot M
Recurrent Acute Septic Arthritis Caused by Kingella kingae in a 16-Month-Old Boy.
The Pediatric Infectious Disease Journal 2019, 38, e270-e271.

Jackson C, Hsia Y, Basmaci R, Bielicki J, Heath PT, Versporten A, Goossens H, Sharland M
Global Divergence From World Health Organization Treatment Guidelines for Neonatal and Pediatric Sepsis.
The Pediatric Infectious Disease Journal 2019, 38, 1104-1106.

Bertin C, Abbas R, Andrieu V, Michard F, Rioux C, Descamps V, Yazdanpanah Y, Bouscarat F
Illicit massive silicone injections always induce chronic and definitive silicone blood diffusion with dermatologic complications.
Medicine 2019, 98, e14143.

Palich R, Ghosn J, Chaillon A, Boilet V, Nere ML, Chaix ML, Delobel P, Molina JM, Lucht F, Bouchaud O, Rieux V, Thiebaut R, Levy Y, Delaugerre C, Lelievre JD
Viral rebound in semen after antiretroviral treatment interruption in an HIV therapeutic vaccine double-blind trial:.
AIDS 2019, 33, 279-284.

Lucar O, Sadjo Diallo M, Bayard C, Samri A, Tarantino N, Debré P, Thiébaut R, Brun-Vézinet F, Matheron S, Cheynier R, Vieillard V
B7-H6-mediated downregulation of NKp30 in natural killer cells contributes to HIV-2 immune escape:.
AIDS 2019, 33, 23-32.

Pommier JD, Laouénan C, Michard F, Papot E, Urios P, Boutten A, Peytavin G, Ghander C, Lariven S, Castanedo G, Moho D, Landman R, Phung B, Perez E, Julia Z, Descamps D, Roland-Nicaise P, Le Gac S, Yazdanpanah Y, Guibourdenche J, Yeni P
Metabolic syndrome and endocrine status in HIV-infected transwomen.
AIDS (London, England) 2019, 33, 855-865.

Peyronnet V, Warszawski J, Sibiude J, Dialla O, Bourgeois-Moine A, Bui E, Toulza CS, Peretti D, Brunet-Cartier C, Avettand-Fenoel V, Chenadec JL, Faye A, Tubiana R, Mandelbrot L
Does Changing Antiretroviral Therapy in the First Trimester of Pregnancy for Safety Concerns Have an Impact on Viral Suppression?.
Journal of Acquired Immune Deficiency Syndromes (1999) 2019, 80, 574-584.

Sibiude J, Warszawski J, Tubiana R, Le Chenadec J, Meier F, Faye A, Blanche S, Mandelbrot L, ANRS-French Perinatal Cohort Study Group
Liver Enzyme Elevation in Pregnant Women Receiving Antiretroviral Therapy in the ANRS-French Perinatal Cohort.
Journal of Acquired Immune Deficiency Syndromes (1999) 2019, 81, 83-94.

Januel E, Godin O, Moulignier A, Lescure FX, Savatovsky J, Lamirel C, Valin N, Tubiana R, Canestri A, Roux P, Sadik JC, Salomon L, Katlama C, Yazdanpanah Y, Pialoux G, Girard PM, Costagliola D, Assoumou L, Microvascular Brain Retina And Kidney (MicroBREAK) Study Group
Brief Report: Impact of ART Classes on the Increasing Risk of Cerebral Small-Vessel Disease in Middle-Aged, Well-Controlled, cART-Treated, HIV-Infected Individuals.
Journal of Acquired Immune Deficiency Syndromes (1999) 2019, 81, 547-551.

Garnacho-Montero J, Timsit JF
Managing Acinetobacter baumannii infections:.
Current Opinion in Infectious Diseases 2019, 32, 69-76.

Branger C, Ledda A, Billard-Pomares T, Doublet B, Barbe V, Roche D, Médigue C, Arlet G, Denamur E
Specialization of small non-conjugative plasmids in Escherichia coli according to their family types.
Microbial Genomics 2019

Clermont O, Dixit OVA, Vangchhia B, Condamine B, Dion S, Bridier-Nahmias A, Denamur E, Gordon D
Characterization and rapid identification of phylogroup G in Escherichia coli, a lineage with high virulence and antibiotic resistance potential.
Environmental Microbiology 2019, 21, 3107-3117.

Mediamolle N, Mallet C, Aupiais C, Doit C, Ntika S, Vialle R, Grimprel E, Pejin Z, Bonacorsi S, Lorrot M
Bone and joint infections in infants under three months of age.
Acta Paediatrica (Oslo, Norway: 1992) 2019, 108, 933-939.

Lê MP, Chaix M, Raffi F, Chevret S, Gallien S, Katlama C, Delobel P, Yazdanpanah Y, Saillard J, Molina J, Peytavin G, the ANRS‐165 DARULIGHT study group
Once‐daily darunavir/ritonavir 400/100 mg in triple therapy: efficacy and penetration in seminal compartment in ANRS ‐165 DARULIGHT study.
British Journal of Clinical Pharmacology 2019, 85, 277-280.

Hervochon R, Madelain V, Seiller I, Lahlou G, Nguyen Y, Tankéré F
CT and clinical prognostic factors in Bell's palsy: A study of 56 cases.
Clinical otolaryngology: official journal of ENT-UK ; official journal of Netherlands Society for Oto-Rhino-Laryngology & Cervico-Facial Surgery 2019, 44, 861-864.

Morel-Journel T, Assa CR, Mailleret L, Vercken E
Its all about connections: hubs and invasion in habitat networks.
Ecology Letters 2019, 22, 313-321.

Kemble H, Nghe P, Tenaillon O
Recent insights into the genotype-phenotype relationship from massively parallel genetic assays.
Evolutionary Applications 2019, 12, 1721-1742.

Willemse S, Smit C, Sogni P, Sarcletti M, Uberti-Foppa C, Wittkop L, Raben D, D'Arminio Monforte A, Dabis F, Van Der Valk M, Hepatocellular Carcinoma Screening Project Working Group for the Collaboration of Observational HIV on behalf of Epidemiological Research Europe (COHERE) In EuroCoord
Low compliance with hepatocellular carcinoma screening guidelines in hepatitis B/C virus co-infected HIV patients with cirrhosis.
Journal of Viral Hepatitis 2019, 26, 1224-1228.

Ghalayini M, Magnan M, Dion S, Zatout O, Bourguignon L, Tenaillon O, Lescat M
Long-term evolution of the natural isolate of Escherichia coli 536 in the mouse gut colonized after maternal transmission reveals convergence in the constitutive expression of the lactose operon.
Molecular Ecology 2019, 28, 4470-4485.

Ghazali DA, Choquet C, Casalino E
Simulation-based training for triage of HIV exposures in the emergency department.
Medical Education 2019, 53, 521-522.

Ghazali DA, Kenway P, Casalino E
Simulation-based training for pain assessment in the emergency department.
Medical Education 2019, 53, 1149-1150.

Bassetti M, Scudeller L, Giacobbe DR, Lamoth F, Righi E, Zuccaro V, Grecchi C, Rebuffi C, Akova M, Alastruey-Izquierdo A, Arikan-Akdagli S, Azoulay E, Blot SI, Cornely OA, Lass-Flörl C, Koehler P, Cuenca-Estrella M, de Lange DW, De Rosa FG, De Waele JJ, Dimopoulos G, Garnacho-Montero J, Hoenigl M, Kanj SS, Maertens J, Martin-Loeches I, Muñoz P, Kullberg BJ, Agvald-Ohman C, Poulakou G, Rello J, Sanguinetti M, Taccone FS, Timsit JF, Torres A, Vazquez JA, Calandra T, from the Study Group for Infections in Critically Ill Patients (ESGCIP) and the Fungal Infection Study Group (EFISG) of the European Society of Clinical Microbiology and Infectious Diseases (ESCMID), European Society of Intensive Care Medicine (ESICM), European Confederation of Medical Mycology (ECMM), Mycoses Study Group Education and Research Consortium (MSGERC)
Developing definitions for invasive fungal diseases in critically ill adult patients in intensive care units. Protocol of the FUNgal infections Definitions in ICU patients (FUNDICU) project.
Mycoses 2019, 62, 310-319.

Ursino M, Yuan Y, Alberti C, Comets E, Favrais G, Friede T, Lentz F, Stallard N, Zohar S
A dose finding design for seizure reduction in neonates.
Journal of the Royal Statistical Society: Series C (Applied Statistics) 2019, 68, 427-444.

Dufour N, Delattre R, Chevallereau A, Ricard JD, Debarbieux L
Phage Therapy of Pneumonia Is Not Associated with an Overstimulation of the Inflammatory Response Compared to Antibiotic Treatment in Mice.
Antimicrobial Agents and Chemotherapy 2019, 63,

Birgy A, Levy C, Nicolas-Chanoine MH, Cointe A, Hobson CA, Magnan M, Bechet S, Bidet P, Cohen R, Bonacorsi S
Independent Host Factors and Bacterial Genetic Determinants of the Emergence and Dominance of Escherichia coli Sequence Type 131 CTX-M-27 in a Community Pediatric Cohort Study.
Antimicrobial Agents and Chemotherapy 2019, 63,

Billard-Pomares T, Clermont O, Castellanos M, Magdoud F, Royer G, Condamine B, Fouteau S, Barbe V, Roche D, Cruveiller S, Médigue C, Pognard D, Glodt J, Dion S, Rigal O, Picard B, Denamur E, Branger C
The Arginine Deiminase Operon Is Responsible for a Fitness Trade-Off in Extended-Spectrum-β-Lactamase-Producing Strains of Escherichia coli.
Antimicrobial Agents and Chemotherapy 2019, 63,

Burdet C, Nguyen TT, Duval X, Ferreira S, Andremont A, Guedj J, Mentré F, DAV132-CL-1002 Study Group
Impact of Antibiotic Gut Exposure on the Temporal Changes in Microbiome Diversity.
Antimicrobial Agents and Chemotherapy 2019, 63, e00820-19.

Pourbaix A, Guérin F, Burdet C, Massias L, Chau F, Cattoir V, Fantin B
Unexpected Activity of Oral Fosfomycin against Resistant Strains of Escherichia coli in Murine Pyelonephritis.
Antimicrobial Agents and Chemotherapy 2019, 63, e00903-19.

Kieffer N, Royer G, Decousser JW, Bourrel AS, Palmieri M, Ortiz De La Rosa JM, Jacquier H, Denamur E, Nordmann P, Poirel L
mcr-9, an Inducible Gene Encoding an Acquired Phosphoethanolamine Transferase in Escherichia coli, and Its Origin.
Antimicrobial Agents and Chemotherapy 2019, 63,

Parize P, Mamez AC, Garcia-Hermoso D, Dumaine V, Poirée S, Kauffmann-Lacroix C, Jullien V, Lortholary O, Lanternier F
Successful Treatment of Saksenaea sp. Osteomyelitis by Conservative Surgery and Intradiaphyseal Incorporation of Amphotericin B Cement Beads.
Antimicrobial Agents and Chemotherapy 2019, 63, e01006-18.

Mahérault AC, Kemble H, Magnan M, Gachet B, Roche D, Le Nagard H, Tenaillon O, Denamur E, Branger C, Landraud L
Advantage of the F2:A1:B- IncF Pandemic Plasmid over IncC Plasmids in In Vitro Acquisition and Evolution of blaCTX-M Gene-Bearing Plasmids in Escherichia coli.
Antimicrobial Agents and Chemotherapy 2019, 63,

Barde F, Billaud E, Goldwirt L, Horodyckid C, Jullien V, Lanternier F, Lesprit P, Limousin L, Cohen JF, Lortholary O
Low Central Nervous System Posaconazole Concentrations during Cerebral Phaeohyphomycosis.
Antimicrobial Agents and Chemotherapy 2019, 63, e01184-19.

Facchin A, Elie V, Benyoub N, Magreault S, Maisin A, Storme T, Zhao W, Deschenes G, Jacqz-Aigrain E
Population pharmacokinetics of ganciclovir after valganciclovir in renal transplant children.
Antimicrobial Agents and Chemotherapy 2019, 63, e01192-19, AAC.01192-19.

Saint-Lu N, Burdet C, Sablier-Gallis F, Corbel T, Nevière A, Sayah-Jeanne S, Pulse M, Weiss W, Ferreira S, Andremont A, Mentré F, de Gunzburg J
DAV131A Protects Hamsters from Lethal Clostridioides difficile Infection Induced by Fluoroquinolones.
Antimicrobial Agents and Chemotherapy 2019, 64, e01196-19.

Boulant T, Jousset AB, Bonnin RA, Barrail-Tran A, Borgel A, Oueslati S, Naas T, Dortet L
A 2.5-years within-patient evolution of a Pseudomonas aeruginosa with in vivo acquisition of ceftolozane-tazobactam and ceftazidime-avibactam resistance upon treatment.
Antimicrobial Agents and Chemotherapy 2019, 63, e01637-19, AAC.01637-19.

Kieffer N, Royer G, Decousser JW, Bourrel AS, Palmieri M, Ortiz De La Rosa JM, Jacquier H, Denamur E, Nordmann P, Poirel L
Erratum for Kieffer et al., "mcr-9, an Inducible Gene Encoding an Acquired Phosphoethanolamine Transferase in Escherichia coli, and Its Origin"..
Antimicrobial agents and chemotherapy 2019, 63,

Burdet C, Grall N, Linard M, Bridier-Nahmias A, Benhayoun M, Bourabha K, Magnan M, Clermont O, d'Humières C, Tenaillon O, Denamur E, Massias L, Tubiana S, Alavoine L, Andremont A, Mentré F, Duval X, CEREMI Group
Ceftriaxone and Cefotaxime Have Similar Effects on the Intestinal Microbiota in Human Volunteers Treated by Standard-Dose Regimens.
Antimicrobial Agents and Chemotherapy 2019, 63, e02244-18.

Hobson CA, Bonacorsi S, Fahd M, Baruchel A, Cointe A, Poey N, Jacquier H, Doit C, Monjault A, Tenaillon O, Birgy A
Successful Treatment of Bacteremia Due to NDM-1-Producing Morganella morganii with Aztreonam and Ceftazidime-Avibactam Combination in a Pediatric Patient with Hematologic Malignancy.
Antimicrobial Agents and Chemotherapy 2019, 63,

Rouzaud C, Jullien V, Herbrecht A, Palmier B, Lapusan S, Morgand M, Guéry R, Dureault A, Danion F, Puget S, Goldwirt L, Lanternier F, Lortholary O
Isavuconazole Diffusion in Infected Human Brain.
Antimicrobial Agents and Chemotherapy 2019, 63, e02474-18.

Nowrouzian FL, Clermont O, Edin M, Östblom A, Denamur E, Wold AE, Adlerberth I
Escherichia coli B2 Phylogenetic Subgroups in the Infant Gut Microbiota: Predominance of Uropathogenic Lineages in Swedish Infants and Enteropathogenic Lineages in Pakistani Infants.
Applied and Environmental Microbiology 2019, 85,

Caméléna F, Birgy A, Smail Y, Courroux C, Mariani-Kurkdjian P, Le Hello S, Bonacorsi S, Bidet P
Rapid and Simple Universal Escherichia coli Genotyping Method Based on Multiple-Locus Variable-Number Tandem-Repeat Analysis Using Single-Tube Multiplex PCR and Standard Gel Electrophoresis.
Applied and Environmental Microbiology 2019, 85,

Lescat M, Poirel L, Tinguely C, Nordmann P
A Resazurin Reduction-Based Assay for Rapid Detection of Polymyxin Resistance in Acinetobacter baumannii and Pseudomonas aeruginosa.
Journal of Clinical Microbiology 2019, 57,

Stefic K, Guinard J, Peytavin G, Saboni L, Sommen C, Sauvage C, Lot F, Laperche S, Velter A, Barin F, Prevagay working group
Screening for Human Immunodeficiency Virus infection using a fourth-generation antigen/antibody assay and dried blood spots: in depth analysis of sensitivity and performance assessment in a cross-sectional study.
Journal of Clinical Microbiology 2019

Audry M, Robbe-Masselot C, Barnier JP, Gachet B, Saubaméa B, Schmitt A, Schönherr-Hellec S, Léonard R, Nassif X, Coureuil M
Airway Mucus Restricts Neisseria meningitidis Away from Nasopharyngeal Epithelial Cells and Protects the Mucosa from Inflammation..
mSphere 2019

Pouletty M, De Pontual L, Lopez M, Morin L, Poilane I, Pham LL, Carbonnelle E, Titomanlio L, Faye A, Bonacorsi S
Multiplex PCR reveals a high prevalence of multiple pathogens in traveller's diarrhoea in children.
Archives of Disease in Childhood 2019, 104, 141-146.

Baril L, Vallès X, Stenseth NC, Rajerison M, Ratsitorahina M, Pizarro-Cerdá J, Demeure C, Belmain S, Scholz H, Girod R, Hinnebusch J, Vigan-Womas I, Bertherat E, Fontanet A, Yazadanpanah Y, Carrara G, Deuve J, D'ortenzio E, Angulo JOC, Mead P, Horby PW
Can we make human plague history? A call to action.
BMJ Global Health 2019, 4, e001984.

Favrais G, Ursino M, Mouchel C, Boivin E, Jullien V, Zohar S, Saliba E
Levetiracetam optimal dose-finding as first-line treatment for neonatal seizures occurring in the context of hypoxic-ischaemic encephalopathy (LEVNEONAT-1): study protocol of a phase II trial.
BMJ open 2019, 9, e022739.

Garnier M, Gallah S, Vimont S, Benzerara Y, Labbe V, Constant AL, Siami S, Guerot E, Compain F, Mainardi JL, Montil M, Quesnel C, BLUE-CarbA study group.
Multicentre randomised controlled trial to investigate usefulness of the rapid diagnostic βLACTA test performed directly on bacterial cell pellets from respiratory, urinary or blood samples for the early de-escalation of carbapenems in septic intensive care unit patients: the BLUE-CarbA protocol.
BMJ open 2019, 9, e024561.

Hentzien M, Dramé M, Delpierre C, Allavena C, Cabié A, Cuzin L, Rey D, Pugliese P, Hédelin G, Bani-Sadr F, Dat’AIDS Study Group
HIV-related excess mortality and age-related comorbidities in patients with HIV aged ≥60: a relative survival analysis in the French Dat'AIDS cohort.
BMJ open 2019, 9, e024841.

Boisson M, Corbi P, Kerforne T, Camilleri L, Debauchez M, Demondion P, Eljezi V, Flecher E, Lepelletier D, Leprince P, Nesseler N, Nizou JY, Roussel JC, Rozec B, Ruckly S, Lucet JC, Timsit JF, Mimoz O
Multicentre, open-label, randomised, controlled clinical trial comparing 2% chlorhexidine-70% isopropanol and 5% povidone iodine-69% ethanol for skin antisepsis in reducing surgical-site infection after cardiac surgery: the CLEAN 2 study protocol.
BMJ open 2019, 9, e026929.

Javaud N, Soria A, Maignan M, Martin L, Descamps V, Fain O, Bouillet L, Berard F, Tazarourte K, Roy PM, Fontaine JP, Bagot M, Khellaf M, Goulet H, Lapostolle F, Casalino E, Doutre MS, Gil-Jardine C, Caux F, Chosidow O, Pateron D, Vicaut E, Adnet F
Glucocorticoids for acute urticaria: study protocol for a double-blind non-inferiority randomised controlled trial.
BMJ open 2019, 9, e027431.

Flowers H, Bérubé D, Ebrahimipour M, Perrier MF, Moloci S, Skoretz S
Swallowing behaviours and feeding environment in relation to communication development from early infancy to 6 years of age: a scoping review protocol.
BMJ Open 2019, 9, e028850.

Haviari S, Chollet F, Polazzi S, Payet C, Beauveil A, Colin C, Duclos A
Effect of data validation audit on hospital mortality ranking and pay for performance.
BMJ quality & safety 2019, 28, 459-467.

Le Bel J, Pelaccia T, Ray P, Mayaud C, Brun AL, Hausfater P, Casalino E, Benjoar M, Claessens YE, Duval X, ESCAPED study group
Impact of emergency physician experience on decision-making in patients with suspected community-acquired pneumonia and undergoing systematic thoracic CT scan.
Emergency medicine journal: EMJ 2019, 36, 485-492.

Landon-Cardinal O, Gallay L, Dubourg O, Maisonobe T, Léonard-Louis S, Beniken D, Simon A, Behin A, Stojkovic T, Duyckaerts C, Breton G, Rigolet A, Fain O, Meyohas MC, Leport C, Valantin MA, Vittecoq D, Bergmann JF, Hanslik T, Chauveheid MP, Amoura Z, de Broucker T, Eymard B, Beaudequin N, Benveniste O, Allenbach Y
Expanding the spectrum of HIV-associated myopathy.
Journal of Neurology, Neurosurgery, and Psychiatry 2019, 90, 1296-1298.

Vuillard C, Dib F, Achamlal J, Gaudry S, Roux D, Chemouny M, Javaud N, Dreyfuss D, Ricard JD, Messika J
Longer symptom onset to aspiration time predicts success of needle aspiration in primary spontaneous pneumothorax.
Thorax 2019, 74, 780-786.

Calais J, Touati A, Grall N, Laouénan C, Benali K, Mahida B, Vigne J, Hyafil F, Iung B, Duval X, Lepage L, Le Guludec D, Rouzet F
Diagnostic Impact of 18F-Fluorodeoxyglucose Positron Emission Tomography/Computed Tomography and White Blood Cell SPECT/Computed Tomography in Patients With Suspected Cardiac Implantable Electronic Device Chronic Infection.
Circulation. Cardiovascular Imaging 2019, 12, e007188.

Roca O, Caralt B, Messika J, Samper M, Sztrymf B, Hernández G, García-de-Acilu M, Frat JP, Masclans JR, Ricard JD
An Index Combining Respiratory Rate and Oxygenation to Predict Outcome of Nasal High-Flow Therapy.
American Journal of Respiratory and Critical Care Medicine 2019, 199, 1368-1376.

Gaudry S, Quenot JP, Hertig A, Barbar SD, Hajage D, Ricard JD, Dreyfuss D
Timing of Renal Replacement Therapy for Severe Acute Kidney Injury in Critically Ill Patients.
American Journal of Respiratory and Critical Care Medicine 2019, 199, 1066-1075.

Roca O, Caralt B, Ricard JD
Reply to Tatkov, to Karim and Esquinas, and to Tulaimat.
American Journal of Respiratory and Critical Care Medicine 2019, 200, 117-119.

Guimarães-Costa R, Niérat MC, Rivals I, Morélot-Panzini C, Romero NB, Menegaux F, Salachas F, Gonzalez-Bermejo J, Similowski T, Bruneteau G, RespiStimALS team
Implanted Phrenic Stimulation Impairs Local Diaphragm Myofiber Reinnervation in Amyotrophic Lateral Sclerosis.
American Journal of Respiratory and Critical Care Medicine 2019, 200, 1183-1187.

Gaudry S, Quenot JP, Hertig A, Barbar SD, Hajage D, Ricard JD, Dreyfuss D
Reply to Chousterman et al.: Delaying Renal Replacement Therapy Could Be Harmful in Patients with Acute Brain Injury.
American Journal of Respiratory and Critical Care Medicine 2019, 200, 646-647.

Reynard S, Journeaux A, Gloaguen E, Schaeffer J, Varet H, Pietrosemoli N, Mateo M, Baillet N, Laouenan C, Raoul H, Mullaert J, Baize S
Immune parameters and outcomes during Ebola virus disease.
JCI insight 2019, 4, 125106.

Guimarães-Costa R, Similowski T, Rivals I, Morélot-Panzini C, Nierat MC, Bui MT, Akbar D, Straus C, Romero NB, Michel PP, Menegaux F, Salachas F, Gonzalez-Bermejo J, Bruneteau G, RespiStimALS team, contributors to the RespiStimALS study were:
Human diaphragm atrophy in amyotrophic lateral sclerosis is not predicted by routine respiratory measures.
The European Respiratory Journal 2019, 53,

Messika J, Martin Y, Maquigneau N, Puechberty C, Henry-Lagarrigue M, Stoclin A, Panneckouke N, Villard S, Dechanet A, Lafourcade A, Dreyfuss D, Hajage D, Ricard JD, MUS-IRA team, MUS-IRA Investigators:
A musical intervention for respiratory comfort during noninvasive ventilation in the ICU.
The European Respiratory Journal 2019, 53,

Gobat N, Amuasi J, Yazdanpanah Y, Sigfid L, Davies H, Byrne JP, Carson G, Butler C, Nichol A, Goossens H
Advancing preparedness for clinical research during infectious disease epidemics.
ERJ open research 2019

Vila Nova M, Durimel K, La K, Felten A, Bessières P, Mistou MY, Mariadassou M, Radomski N
Genetic and metabolic signatures of Salmonella enterica subsp. enterica associated with animal sources at the pangenomic scale.
BMC genomics 2019, 20, 814.

Geslain G, Birgy A, Adiba S, Magnan M, Courroux C, Levy C, Cohen R, Bidet P, Bonacorsi S
Genome sequencing of strains of the most prevalent clonal group of O1:K1:H7 Escherichia coli that causes neonatal meningitis in France.
BMC microbiology 2019, 19, 17.

Genuini M, Bidet P, Benoist JF, Schlemmer D, Lemaitre C, Birgy A, Bonacorsi S
ShiF acts as an auxiliary factor of aerobactin secretion in meningitis Escherichia coli strain S88.
BMC microbiology 2019, 19, 298.

Vermee Q, Cohen R, Hays C, Varon E, Bonacorsi S, Bechet S, Thollot F, Corrard F, Poyart C, Levy C, Raymond J
Biofilm production by Haemophilus influenzae and Streptococcus pneumoniae isolated from the nasopharynx of children with acute otitis media.
BMC infectious diseases 2019, 19, 44.

Lions C, Cabras O, Cotte L, Huleux T, Gagneux-Brugnon A, Makinson A, Cabié A, Bonnet B, Duvivier C, Hocqueloux L, Cua E, Cheret A, Hustache-Mathieu L, Obry-Roguet V, Jacomet C, Poizot-Martin I, DAT’AIDS STUDY GROUP
Missed opportunities of HIV pre-exposure prophylaxis in France: a retrospective analysis in the French DAT'AIDS cohort.
BMC infectious diseases 2019, 19, 278.

Vaux S, Chevaliez S, Saboni L, Sauvage C, Sommen C, Barin F, Alexandre A, Jauffret-Roustide M, Lot F, Velter A, ANRS-Prevagay group
Prevalence of hepatitis C infection, screening and associated factors among men who have sex with men attending gay venues: a cross-sectional survey (PREVAGAY), France, 2015.
BMC infectious diseases 2019, 19, 315.

Barcellos RB, de Almeida IN, da Silva EC, Gomes HM, de Assis Figueredo LJ, Halon ML, Dalla Costa ER, Dos Santos ÍR, Vater MC, Alves S, da Silva Carvalho W, Suffys P, Sola C, de Miranda SS, Rossetti ML, Kritski A
Multicenter evaluation of TB-SPRINT 59-Plex Beamedex®: accuracy and cost analysis..
BMC infectious diseases 2019, 19, 1047.

Jary A, Dienta S, Leducq V, Le Hingrat Q, Cisse M, Diarra AB, Fofana DB, Ba A, Baby M, Achenbach CJ, Murphy R, Calvez V, Marcelin AG, Maiga AI
Seroprevalence and risk factors for HIV, HCV, HBV and syphilis among blood donors in Mali.
BMC Infectious Diseases 2019, 19, 1064.

Linard M, Deneux-Tharaux C, Luton D, Schmitz T, Mandelbrot L, Estellat C, Sauvegrain P, Azria E, PreCARE study group, BiP study group
Differential rates of cesarean delivery by maternal geographical origin: a cohort study in France.
BMC pregnancy and childbirth 2019, 19, 217.

Le Tyrant M, Bley D, Leport C, Alfandari S, Guégan JF
Low to medium-low risk perception for dengue, chikungunya and Zika outbreaks by infectious diseases physicians in France, Western Europe.
BMC public health 2019, 19, 1014.

Garrouste-Orgeas M, Flahault C, Poulain E, Evin A, Guirimand F, Fossez-Diaz V, Perruchio S, Verlaine C, Vanbésien A, Kaczmarek W, Birkui de Francqueville L, De Larivière E, Bouquet G, Copel L, Verliac V, Marché V, Mathias C, Gracia D, Mhalla A, Michonneau-Gandon V, Poupardin C, Touzet L, Ranchou G, Guastella V, Richard B, Bienfait F, Sonrier M, Michel D, Ruckly S, Bailly S, Timsit JF
The Fami-life study: protocol of a prospective observational multicenter mixed study of psychological consequences of grieving relatives in French palliative care units on behalf of the family research in palliative care (F.R.I.P.C research network).
BMC Palliative Care 2019, 18, 111.

Arangalage D, Abtan J, Gaschignard J, Ceccaldi PF, Remini SA, Etienne I, Ruszniewski P, Plaisance P, De Lastours V, Lefort A, Faye A
Implementation of a large-scale simulation-based cardiovascular clinical examination course for undergraduate medical students - a pilot study.
BMC medical education 2019, 19, 361.

Schwarzinger M, Luchini S, EPICORL Study Group
Estimating health state utility from activities of daily living in the French National Hospital Discharge Database: a feasibility study with head and neck cancer.
Health and Quality of Life Outcomes 2019, 17, 129.

Prevel R, Boyer A, M’Zali F, Lasheras A, Zahar JR, Rogues AM, Gruson D
Is systematic fecal carriage screening of extended-spectrum beta-lactamase-producing Enterobacteriaceae still useful in intensive care unit: a systematic review.
Critical Care 2019, 23,

Bassetti M, Giacobbe DR, Vena A, Trucchi C, Ansaldi F, Antonelli M, Adamkova V, Alicino C, Almyroudi MP, Atchade E, Azzini AM, Carannante N, Carnelutti A, Corcione S, Cortegiani A, Dimopoulos G, Dubler S, García-Garmendia JL, Girardis M, Cornely OA, Ianniruberto S, Kullberg BJ, Lagrou K, Le Bihan C, Luzzati R, Malbrain MLNG, Merelli M, Marques AJ, Martin-Loeches I, Mesini A, Paiva JA, Peghin M, Raineri SM, Rautemaa-Richardson R, Schouten J, Brugnaro P, Spapen H, Tasioudis P, Timsit JF, Tisa V, Tumbarello M, van den Berg CHSB, Veber B, Venditti M, Voiriot G, Wauters J, Montravers P
Incidence and outcome of invasive candidiasis in intensive care units (ICUs) in Europe: results of the EUCANDICU project.
Critical Care 2019, 23,

Morvan AC, Garrouste-Orgeas M, Ruckly S, Forel JM, Argaud L, Rimmelé T, Bedos JP, Azoulay E, Dupuis C, Mourvillier B, Schwebel C, Timsit JF
Impact of species and antibiotic therapy of enterococcal peritonitis on 30-day mortality in critical care—an analysis of the OUTCOMEREA database.
Critical Care 2019, 23, 307.

Dumas G, Demoule A, Mokart D, Lemiale V, Nseir S, Argaud L, Pène F, Kontar L, Bruneel F, Klouche K, Barbier F, Reignier J, Stoclin A, Louis G, Constantin JM, Wallet F, Kouatchet A, Peigne V, Perez P, Girault C, Jaber S, Cohen Y, Nyunga M, Terzi N, Bouadma L, Lebert C, Lautrette A, Bigé N, Raphalen JH, Papazian L, Benoit D, Darmon M, Chevret S, Azoulay E
Center effect in intubation risk in critically ill immunocompromised patients with acute hypoxemic respiratory failure.
Critical Care 2019, 23, 306.

Lascarrou JB, Dumas F, Bougouin W, Chocron R, Beganton F, Legriel S, Aissaoui N, Deye N, Lamhaut L, Jost D, Vieillard-Baron A, Marijon E, Jouven X, Cariou A, SDEC
Temporal trends in the use of targeted temperature management after cardiac arrest and association with outcome: insights from the Paris Sudden Death Expertise Centre.
Critical Care (London, England) 2019, 23, 391.

Bouadma L, Darmon M, Argaud L, Vinclair C, Siami S, Garrouste-Orgeas M, Papazian L, Cohen Y, Marcotte G, Styfalova L, Reignier J, Lautrette A, Schwebel C, Timsit JF
Influence of dyskalemia at admission and early dyskalemia correction on survival and cardiac events of critically ill patients.
Critical Care 2019, 23,

Birgand G, Haudebourg T, Grammatico-Guillon L, Ferrand L, Moret L, Gouin F, Mauduit N, Leux C, Le Manach Y, Lepelletier D, Tavernier E, Lucet JC, Giraudeau B
Improvement in staff behavior during surgical procedures to prevent post-operative complications (ARIBO2): study protocol for a cluster randomised trial.
Trials 2019, 20,

the PREVAC study team, Lhomme E, Modet C, Augier A, Faye S, Dabakuyo-Yonli TS, Levy-Marchal C, D’Ortenzio E, Yazdanpanah Y, Chêne G, Beavogui AH, Richert L
Enrolling study personnel in Ebola vaccine trials: from guidelines to practice in a non-epidemic context.
Trials 2019, 20,

Gaudry S, Hajage D, Martin-Lefevre L, Louis G, Moschietto S, Titeca-Beauport D, La Combe B, Pons B, de Prost N, Besset S, Combes A, Robine A, Beuzelin M, Badie J, Chevrel G, Reignier J, Bohé J, Coupez E, Chudeau N, Barbar S, Vinsonneau C, Forel JM, Thevenin D, Boulet E, Lakhal K, Aissaoui N, Grange S, Leone M, Lacave G, Nseir S, Poirson F, Mayaux J, Asehnoune K, Geri G, Klouche K, Thiery G, Argaud L, Ricard JD, Quenot JP, Dreyfuss D
The Artificial Kidney Initiation in Kidney Injury 2 (AKIKI2): study protocol for a randomized controlled trial.
Trials 2019, 20, 726.

Pons S, Sonneville R, Bouadma L, Styfalova L, Ruckly S, Neuville M, Radjou A, Lebut J, Dilly MP, Mourvillier B, Dorent R, Nataf P, Wolff M, Timsit JF
Infectious complications following heart transplantation in the era of high-priority allocation and extracorporeal membrane oxygenation.
Annals of Intensive Care 2019, 9, 17.

Karpanen TJ, Casey AL, Whitehouse T, Timsit JF, Mimoz O, Palomar M, Elliott TSJ
A clinical evaluation of two central venous catheter stabilization systems.
Annals of Intensive Care 2019, 9, 49.

Papazian L, Aubron C, Brochard L, Chiche JD, Combes A, Dreyfuss D, Forel JM, Guérin C, Jaber S, Mekontso-Dessap A, Mercat A, Richard JC, Roux D, Vieillard-Baron A, Faure H
Formal guidelines: management of acute respiratory distress syndrome.
Annals of Intensive Care 2019, 9, 69.

Tanaka S, Diallo D, Delbosc S, Genève C, Zappella N, Yong-Sang J, Patche J, Harrois A, Hamada S, Denamur E, Montravers P, Duranteau J, Meilhac O
High-density lipoprotein (HDL) particle size and concentration changes in septic shock patients.
Annals of Intensive Care 2019, 9, 68.

Balmier A, Dib F, Serret-Larmande A, De Montmollin E, Pouyet V, Sztrymf B, Megarbane B, Thiagarajah A, Dreyfuss D, Ricard JD, Roux D
Initial management of diabetic ketoacidosis and prognosis according to diabetes type: a French multicentre observational retrospective study.
Annals of Intensive Care 2019, 9, 91.

Smonig R, Magalhaes E, Bouadma L, Andremont O, de Montmollin E, Essardy F, Mourvillier B, Lebut J, Dupuis C, Neuville M, Lermuzeaux M, Timsit JF, Sonneville R
Impact of natural light exposure on delirium burden in adult patients receiving invasive mechanical ventilation in the ICU: a prospective study.
Annals of Intensive Care 2019, 9, 120.

Mousseaux C, Dupont A, Rafat C, Ekpe K, Ghrenassia E, Kerhuel L, Ardisson F, Mariotte E, Lemiale V, Schlemmer B, Azoulay E, Zafrani L
Epidemiology, clinical features, and management of severe hypercalcemia in critically ill patients.
Annals of Intensive Care 2019, 9, 133.

Zingg W, Storr J, Park BJ, Ahmad R, Tarrant C, Castro-Sanchez E, Tomczyk S, Kilpatrick C, Allegranzi B, Cardo D, Pittet D, 2017 Geneva IPC-Think Tank
Implementation research for the prevention of antimicrobial resistance and healthcare-associated infections; 2017 Geneva infection prevention and control (IPC)-think tank (part 1).
Antimicrobial Resistance and Infection Control 2019, 8, 87.

Zingg W, Storr J, Park BJ, Jernigan JA, Harbarth S, Grayson ML, Tacconelli E, Allegranzi B, Cardo D, Pittet D, 2017 Geneva-IPC Think Tank
Broadening the infection prevention and control network globally; 2017 Geneva IPC-think tank (part 3).
Antimicrobial Resistance and Infection Control 2019, 8, 74.

Zingg W, Park BJ, Storr J, Ahmad R, Tarrant C, Castro-Sanchez E, Perencevich E, Widmer A, Krause KH, Kilpatrick C, Tomczyk S, Allegranzi B, Cardo D, Pittet D, 2017 Geneva IPC-Think Tank
Technology for the prevention of antimicrobial resistance and healthcare-associated infections; 2017 Geneva IPC-Think Tank (Part 2).
Antimicrobial Resistance and Infection Control 2019, 8, 83.

Vaillant L, Birgand G, Esposito-Farese M, Astagneau P, Pulcini C, Robert J, Zahar JR, Sales-Wuillemin E, Tubach F, Lucet JC, PerceptR Study group
Awareness among French healthcare workers of the transmission of multidrug resistant organisms: a large cross-sectional survey.
Antimicrobial Resistance and Infection Control 2019, 8, 173.

Droz N, Hsia Y, Ellis S, Dramowski A, Sharland M, Basmaci R
Bacterial pathogens and resistance causing community acquired paediatric bloodstream infections in low- and middle-income countries: a systematic review and meta-analysis.
Antimicrobial Resistance and Infection Control 2019, 8, 207.

Cerou M, Peigné S, Comets E, Chenel M
Application of Item Response Theory to Model Disease Progression and Agomelatine Effect in Patients with Major Depressive Disorder.
The AAPS journal 2019, 22, 4.

Sidorkiewicz S, Malmartel A, Prevost L, Partouche H, Pinot J, Grangé-Cabane A, du Vaure CB, Gilberg S
Patient-Physician Agreement in Reporting and Prioritizing Existing Chronic Conditions.
Annals of Family Medicine 2019, 17, 396-402.

Kassi FK, Drakulovski P, Bellet V, Roger F, Chabrol A, Krasteva D, Doumbia A, Landman R, Kakou A, Reynes J, Delaporte E, Menan HEI, Bertout S, Govender NP
Cryptococcus genetic diversity and mixed infections in Ivorian HIV patients: A follow up study.
PLOS Neglected Tropical Diseases 2019, 13, e0007812.

Charani E, Smith I, Skodvin B, Perozziello A, Lucet JC, Lescure FX, Birgand G, Poda A, Ahmad R, Singh S, Holmes AH
Investigating the cultural and contextual determinants of antimicrobial stewardship programmes across low-, middle- and high-income countries-A qualitative study.
PloS One 2019, 14, e0209847.

Levy C, Varon E, Ouldali N, Wollner A, Thollot F, Corrard F, Werner A, Béchet S, Bonacorsi S, Cohen R
Bacterial causes of otitis media with spontaneous perforation of the tympanic membrane in the era of 13 valent pneumococcal conjugate vaccine.
PloS One 2019, 14, e0211712.

Fournier AL, Yazdanpanah Y, Verdon R, Lariven S, Mackoumbou-Nkouka C, Phung BC, Papot E, Parienti JJ, Landman R, Champenois K
Incidence of and risk factors for medical care interruption in people living with HIV in recent years.
PloS One 2019, 14, e0213526.

Gantner P, Cotte L, Allavena C, Bani-Sadr F, Huleux T, Duvivier C, Valantin MA, Jacomet C, Joly V, Chéret A, Pugliese P, Delobel P, Cabié A, Rey D, for the Dat’AIDS Study Group, Huang JF
Higher rates of HBsAg clearance with tenofovir-containing therapy in HBV/HIV co-infection.
PLOS ONE 2019, 14, e0215464.

Cossais S, Schwarzinger M, Pol S, Fontaine H, Larrey D, Pageaux GP, Canva V, Mathurin P, Yazdanpanah Y, Deuffic-Burban S, Fischer F
Quality of life in patients with chronic hepatitis C infection: Severe comorbidities and disease perception matter more than liver-disease stage.
PLOS ONE 2019, 14, e0215596.

Gantner P, Sylla B, Morand-Joubert L, Frange P, Lacombe K, Khuong MA, Duvivier C, Launay O, Karmochkine M, Arvieux C, Ménard A, Piroth L, Canestri A, Trias D, Peytavin G, Landman R, Ghosn J, on behalf of the Coferal-IMEA048 Study Group, Güerri-Fernández R
“Real life” use of raltegravir during pregnancy in France: The Coferal-IMEA048 cohort study.
PLOS ONE 2019, 14, e0216010.

Kamaliddin C, Rombaut D, Guillochon E, Royo J, Ezinmegnon S, Agbota G, Huguet S, Guemouri S, Peirera C, Coppée R, Broussard C, Alao JM, Aubouy A, Guillonneau F, Deloron P, Bertin GI
From genomic to LC-MS/MS evidence: Analysis of PfEMP1 in Benin malaria cases.
PloS One 2019, 14, e0218012.

Raben D, Sullivan AK, Mocroft A, Kutsyna G, Hadžiosmanović V, Vassilenko A, Chkhartisvili N, Mitsura V, Pedersen C, Anderson J, Begovac J, Bak Dragsted U, Bertisch B, Grzeszczuk A, Minton J, Necsoi VC, Kitchen M, Ajana F, Sokhan A, Comi L, Farazmand P, Pesut D, De Wit S, Gatell JM, Gazzard B, d’Arminio Monforte A, Rockstroh JK, Yazdanpanah Y, Champenois K, Jakobsen ML, Lundgren JD, on behalf of the HIDES Study Group, Sagar M
Improving the evidence for indicator condition guided HIV testing in Europe: Results from the HIDES II Study – 2012 – 2015.
PLOS ONE 2019, 14, e0220108.

Mandelbrot L, Ceccaldi PF, Duro D, Lê M, Pencolé L, Peytavin G, Spradley FT
Placental transfer and tissue accumulation of dolutegravir in the ex vivo human cotyledon perfusion model.
PLOS ONE 2019, 14, e0220323.

Alessandrini V, Anselem O, Girault A, Mandelbrot L, Luton D, Launay O, Goffinet F
Does the availability of influenza vaccine at prenatal care visits and of immediate vaccination improve vaccination coverage of pregnant women?.
PloS One 2019, 14, e0220705.

Samri A, Charpentier C, Diallo MS, Bertine M, Even S, Morin V, Oudin A, Parizot C, Collin G, Hosmalin A, Cheynier R, Thiébaut R, Matheron S, Collin F, Zoorob R, Brun-Vézinet F, Autran B, ANRS CO5 IMMUNOVIR-2 Study Group
Limited HIV-2 reservoirs in central-memory CD4 T-cells associated to CXCR6 co-receptor expression in attenuated HIV-2 infection.
PLoS pathogens 2019, 15, e1007758.

Lehtinen S, Blanquart F, Lipsitch M, Fraser C, with the Maela Pneumococcal Collaboration
On the evolutionary ecology of multidrug resistance in bacteria.
PLoS pathogens 2019, 15, e1007763.

Anselmo LMP, Conceição EC, Namburete E, Feliciano C, Spindola S, Sola C, Bollela VR
Mycobacterium tuberculosis spoligotypes and drug-resistant characterization from Beira compared to genotypes circulating in Mozambique..
Revista da Sociedade Brasileira de Medicina Tropical 2019, 52, e20190257.

Kolenda C, Monteix A, Houhamdi L, Preynat-Boucher P, Giannoli JM, Escuret V, Laurent F, Morfin F
Do liquid wastes from automated instruments in medical laboratories have their proper microbicide effect?.
Annales De Biologie Clinique 2019, 77, 295-305.

Allain M, Sun K, Predal C, Nassif X, Ferroni A
[Performance analysis of the Sysmex UF4000/UD10 for diagnosis of urinary tract infections].
Annales De Biologie Clinique 2019, 77, 645-650.

Visseaux B, Le Hingrat Q, Damond F, Charpentier C, Descamps D
[Physiopathology of HIV-2 infection].
Virologie (Montrouge, France) 2019, 23, 277-291.

Ricard JD, Gaborieau B, Bernier J, Le Breton C, Messika J
Use of high flow nasal cannula for preoxygenation and apneic oxygenation during intubation..
Annals of translational medicine 2019, 7, S380.

Schernberg A, Sagaon-Teyssier L, Schwarzinger M
Clinical and economic burden of head and neck cancer: a nationwide retrospective cohort study from France.
ClinicoEconomics and outcomes research: CEOR 2019, 11, 441-451.

Cointe A, Walewski V, Hobson CA, Doit C, Bidet P, Dortet L, Bonacorsi S, Birgy A
Rapid Carbapenemase Detection With Xpert Carba-R V2 Directly On Positive Blood Vials.
Infection and Drug Resistance 2019, 12, 3311-3316.

Basilua JM, Sawoo O, Mangin I, Dossou-Yovo F, Boussard A, Chevillard L, Lutete GT, Eto B, Peytavin G, Pochart P
Higher Atazanavir Plasma Exposure in Rats is Associated with Gut Microbiota Changes Induced by Cotrimoxazole.
Current Drug Metabolism 2019, 20, 898-906.

van de Laar MJ, Bosman A, Pharris A, Andersson E, Assoumou L, Ay E, Bannert N, Bartmeyer B, Brady M, Chaix ML, Descamps D, Dauwe K, Fonager J, Hauser A, Lunar M, Mezei M, Neary M, Poljak M, van Sighem A, Verhofstede C, Amato-Gauci AJ, Broberg EK
Piloting a surveillance system for HIV drug resistance in the European Union.
Euro Surveillance: Bulletin Europeen Sur Les Maladies Transmissibles = European Communicable Disease Bulletin 2019, 24,

Jones G, Lefèvre S, Donguy MP, Nisavanh A, Terpant G, Fougère E, Vaissière E, Guinard A, Mailles A, de Valk H, Fila M, Tanné C, Le Borgne C, Weill FX, Bonacorsi S, Jourdan-Da Silva N, Mariani-Kurkdjian P
Outbreak of Shiga toxin-producing Escherichia coli (STEC) O26 paediatric haemolytic uraemic syndrome (HUS) cases associated with the consumption of soft raw cow's milk cheeses, France, March to May 2019.
Euro Surveillance: Bulletin Europeen Sur Les Maladies Transmissibles = European Communicable Disease Bulletin 2019, 24,

Poncin T, Merimeche M, Braille A, Mainardis M, Bebear C, Jacquier H, Berçot B
Two cases of multidrug-resistant Neisseria gonorrhoeae related to travel in south-eastern Asia, France, June 2019.
Euro Surveillance: Bulletin Europeen Sur Les Maladies Transmissibles = European Communicable Disease Bulletin 2019, 24,

Wirden M, De Oliveira F, Bouvier-Alias M, Lambert-Niclot S, Chaix ML, Raymond S, Si-Mohammed A, Alloui C, André-Garnier E, Bellecave P, Malve B, Mirand A, Pallier C, Poveda JD, Rabenja T, Schneider V, Signori-Schmuck A, Stefic K, Calvez V, Descamps D, Plantier JC, Marcelin AG, Visseaux B, On Behalf Of The French National Agency For Research On Aids And Viral Hepatitis Anrs Ac Study Group n
New HIV-1 circulating recombinant form 94: from phylogenetic detection of a large transmission cluster to prevention in the age of geosocial-networking apps in France, 2013 to 2017.
Euro Surveillance: Bulletin Europeen Sur Les Maladies Transmissibles = European Communicable Disease Bulletin 2019, 24,

Ndeikoundam Ngangro N, Viriot D, Fournet N, Pioche C, De Barbeyrac B, Goubard A, Dupin N, Berçot B, Fouéré S, Alcaraz I, Ohayon M, Spenatto N, Vernay-Vaisse C, Pillonel J, Lot F, Referents for the regional offices of the French national public health agency
Bacterial sexually transmitted infections in France: recent trends and patients' characteristics in 2016.
Euro Surveillance: Bulletin Europeen Sur Les Maladies Transmissibles = European Communicable Disease Bulletin 2019, 24,

Bruyand M, Mariani-Kurkdjian P, Le Hello S, King LA, Van Cauteren D, Lefevre S, Gouali M, Jourdan-da Silva N, Mailles A, Donguy MP, Loukiadis E, Sergentet-Thevenot D, Loirat C, Bonacorsi S, Weill FX, De Valk H, Réseau Français Hospitalier de Surveillance du Shu Pédiatrique
Paediatric haemolytic uraemic syndrome related to Shiga toxin-producing Escherichia coli, an overview of 10 years of surveillance in France, 2007 to 2016.
Euro Surveillance: Bulletin Europeen Sur Les Maladies Transmissibles = European Communicable Disease Bulletin 2019, 24,

Jannic A, Mammeri H, Larcher L, Descamps V, Tosini W, Phung B, Yazdanpanah Y, Bouscarat F
Orogenital Transmission of Neisseria meningitidis Causing Acute Urethritis in Men Who Have Sex with Men.
Emerging Infectious Diseases 2019, 25, 175-176.

Acosta F, Agapito J, Cabibbe AM, Cáceres T, Sola C, Pérez-Lago L, Abascal E, Herranz M, Meza E, Klotoe B, Muñoz P, Rossolini GM, Bartoloni A, Tortoli E, Cirillo DM, Gotuzzo E, García de Viedma D
Exportation of MDR TB to Europe from Setting with Actively Transmitted Persistent Strains in Peru..
Emerging infectious diseases 2019, 25, 596-598.

La Combe B, Clermont O, Messika J, Eveillard M, Kouatchet A, Lasocki S, Corvec S, Lakhal K, Billard-Pomares T, Fernandes R, Armand-Lefevre L, Bourdon S, Reignier J, Fihman V, de Prost N, Bador J, Goret J, Wallet F, Denamur E, Ricard JD, COLOCOLI group, COLOCOLI Group
Pneumonia-Specific Escherichia coli with Distinct Phylogenetic and Virulence Profiles, France, 2012-2014.
Emerging Infectious Diseases 2019, 25, 710-718.

Ternois I, Billard-Pomares T, Carbonelle E, Franchinard L, Duclos C
Using SNOMED-CT to Help the Transition from Microbiological Data to ICD-10 Sepsis Codes..
Studies in health technology and informatics 2019, 264, 1604-1605.

Matar GM, Andremont A, Bazzi W
Editorial: Combating Antimicrobial Resistance - A One Health Approach.
Frontiers in Cellular and Infection Microbiology 2019, 9, 458.

Decalonne M, Lecorche E, Hau E, Petiteau A, Moreau C, Milan O, Lanotte P, Mereghetti L, Cambau E, van der Mee-Marquet N
Cause Analysis of an Infection in Facelift Surgery Due to Mycobacterium chelonae.
Frontiers in Medicine 2019, 6, 243.

Liapis E, Bour M, Triponney P, Jové T, Zahar JR, Valot B, Jeannot K, Plésiat P
Identification of Diverse Integron and Plasmid Structures Carrying a Novel Carbapenemase Among Pseudomonas Species.
Frontiers in Microbiology 2019, 10, 404.

Flament-Simon SC, Duprilot M, Mayer N, García V, Alonso MP, Blanco J, Nicolas-Chanoine MH
Association Between Kinetics of Early Biofilm Formation and Clonal Lineage in Escherichia coli.
Frontiers in Microbiology 2019, 10, 1183.

Bourgeois C, Gorwood J, Barrail-Tran A, Lagathu C, Capeau J, Desjardins D, Le Grand R, Damouche A, Béréziat V, Lambotte O
Specific Biological Features of Adipose Tissue, and Their Impact on HIV Persistence.
Frontiers in Microbiology 2019, 10, 2837.

Dupouy V, Abdelli M, Moyano G, Arpaillange N, Bibbal D, Cadiergues MC, Lopez-Pulin D, Sayah-Jeanne S, de Gunzburg J, Saint-Lu N, Gonzalez-Zorn B, Andremont A, Bousquet-Mélou A
Prevalence of Beta-Lactam and Quinolone/Fluoroquinolone Resistance in Enterobacteriaceae From Dogs in France and Spain-Characterization of ESBL/pAmpC Isolates, Genes, and Conjugative Plasmids.
Frontiers in Veterinary Science 2019, 6, 279.

Ghazali DA, Richard A, Chaudet A, Choquet C, Guericolas M, Casalino E
Profile and Motivation of Patients Consulting in Emergency Departments While not Requiring Such a Level of Care.
International Journal of Environmental Research and Public Health 2019, 16, 4431.

Garin N, Marti C, Carballo S, Darbellay Farhoumand P, Montet X, Roux X, Scheffler M, Serratrice C, Serratrice J, Claessens YE, Duval X, Loubet P, Stirnemann J, Prendki V
Rational Use of CT-Scan for the Diagnosis of Pneumonia: Comparative Accuracy of Different Strategies.
Journal of Clinical Medicine 2019

Peyron F, L'ollivier C, Mandelbrot L, Wallon M, Piarroux R, Kieffer F, Hadjadj E, Paris L, Garcia-Meric P
Maternal and Congenital Toxoplasmosis: Diagnosis and Treatment Recommendations of a French Multidisciplinary Working Group.
Pathogens (Basel, Switzerland) 2019

Azevedo-Coste C, Pissard-Gibollet R, Toupet G, Fleury É, Lucet JC, Birgand G
Tracking Clinical Staff Behaviors in an Operating Room.
Sensors (Basel, Switzerland) 2019, 19,

Abgrall S, Raho-Moussa M, Seng R, Ghislain M, Matheron S, Pialoux G, Goujard C, Meyer L, ANRS CO9-COPANA study group†
Elevated risk of viral rebound on ART in migrants living in France: role of socioeconomic factors.
Antiviral Therapy 2019, 24, 541-552.

Sanai FM, Alghamdi H, Alswat KA, Babatin MA, Ismail MH, Alhamoudi WK, Alalwan AM, Dahlan Y, Alghamdi AS, Alfaleh FZ, Aljumah AA, Altraif IH, Albeladi K, Batwa F, Alshumrani W, Belhadi D, Genestier V, Abdo AA
Greater prevalence of comorbidities with increasing age: Cross-sectional analysis of chronic hepatitis B patients in Saudi Arabia.
Saudi Journal of Gastroenterology: Official Journal of the Saudi Gastroenterology Association 2019, 25, 194-200.

Messika J, Ricard JD
High-Flow Nasal Oxygen Therapy Outside the Intensive Care Setting: How Safe Is Safe Enough?.
Respiratory Care 2019, 64, 1447-1449.

Cloitre A, Duval X, Tubiana S, Giraud P, Veyrac G, Nosbaum A, Gouraud A, Mahé J, Lesclous P
Antibiotic prophylaxis for the prevention of infective endocarditis for dental procedures is not associated with fatal adverse drug reactions in France.
Medicina Oral, Patologia Oral Y Cirugia Bucal 2019, 24, e296-e304.

Maillet F, Bonnet N, Billard-Pomares T, El Alaoui Magdoud F, Tandjaoui-Lambiotte Y
Fatal Legionella pneumophila serogroup 1 pleural empyema: A case report..
World journal of critical care medicine 2019, 8, 99-105.

Perrineau S, Lachâtre M, Lê MP, Rioux C, Loubet P, Fréchet-Jachym M, Gonzales MC, Grall N, Bouvet E, Veziris N, Yazdanpanah Y, Peytavin G
Long-term plasma pharmacokinetics of bedaquiline for multidrug- and extensively drug-resistant tuberculosis.
The International Journal of Tuberculosis and Lung Disease 2019, 23, 99-104.

Caméléna F, Birgy A, Smail Y, Courroux C, Mariani-Kurkdjian P, Le Hello S, Bonacorsi S, Bidet P
Rapid and simple universal Escherichia coli genotyping method based on multiple-locus variable-number tandem-repeat analysis using single-tube multiplex PCR and standard gel electrophoresis.
Applied and Environmental Microbiology 2019, 85, e02812–18.

Popping S, Bade D, Boucher C, van der Valk M, El-Sayed M, Sigurour O, Sypsa V, Morgan T, Gamkrelidze A, Mukabatsinda C, Deuffic-Burban S, Ninburg M, Feld J, Hellard M, Ward J
The global campaign to eliminate HBV and HCV infection: International Viral Hepatitis Elimination Meeting and core indicators for development towards the 2030 elimination goals.
Journal of Virus Eradication 2019, 5, 60-66.

Wensing AM, Calvez V, Ceccherini-Silberstein F, Charpentier C, Günthard HF, Paredes R, Shafer RW, Richman DD
2019 update of the drug resistance mutations in HIV-1.
Topics in Antiviral Medicine 2019, 27, 111-121.

Ghazali DA, Fournier E, Breque C, Ragot SP, Oriot D
Immersive simulation training at 6-week intervals for 1 year and multidisciplinary team performance scores: a randomized controlled trial of simulation training for life-threatening pediatric emergencies.
Emergencias: Revista De La Sociedad Espanola De Medicina De Emergencias 2019, 31, 391-398.

Caméléna F, Birgy A, Smail Y, Courroux C, Mariani-Kurkdjian P, Le Hello S, Bonacorsi S, Bidet P
Rapid and simple universal Escherichia coli genotyping method based on multiple-locus variable-number tandem-repeat analysis using single-tube multiplex PCR and standard gel electrophoresis.
Applied and Environmental Microbiology 2019, 85, e02812–18.

 2018                                                                            

Haviari S
Wait Time for Hip Fracture Surgery and Mortality.
JAMA 2018, 319, 2234.

Brunet-Possenti F, Deschamps L, Charpentier C
Use of Combination Systemic-Intratumoral HPV Vaccine to Treat Cutaneous Basaloid Squamous Cell Carcinomas.
JAMA dermatology 2018

Bluhmki T, Allignol A, Ruckly S, Timsit JF, Wolkewitz M, Beyersmann J
Estimation of adjusted expected excess length-of-stay associated with ventilation-acquired pneumonia in intensive care: A multistate approach accounting for time-dependent mechanical ventilation.
Biometrical Journal. Biometrische Zeitschrift 2018, 60, 1135-1150.

Costentin CE, Mourad A, Lahmek P, Causse X, Pariente A, Hagège H, Dobrin AS, Becker C, Marks B, Bader R, Condat B, Héluwaert F, Seitz JF, Lesgourgues B, Denis J, Deuffic-Burban S, Rosa I, Decaens T, CHANGH Study Group
Hepatocellular carcinoma is diagnosed at a later stage in alcoholic patients: Results of a prospective, nationwide study.
Cancer 2018, 124, 1964-1972.

Gloaguen E, Bendelac N, Nicolino M, Julier C, Mathieu F
A systematic review of non-genetic predictors and genetic factors of glycated haemoglobin in type 1 diabetes one year after diagnosis.
Diabetes/Metabolism Research and Reviews 2018, 34, e3051.

Reeves S, Eggleston K, Cort E, McLachlan E, Brownings S, Nair A, Greaves S, Smith A, Dunn J, Marsden P, Kessler R, Taylor D, Bertrand J, Howard R
Therapeutic D2/3 receptor occupancies and response with low amisulpride blood concentrations in very late-onset schizophrenia-like psychosis (VLOSLP).
International Journal of Geriatric Psychiatry 2018, 33, 396-404.

Payancé A, Silva-Junior G, Bissonnette J, Tanguy M, Pasquet B, Levi C, Roux O, Nekachtali O, Baiges A, Hernández-Gea V, Laouénan C, Lebrec D, Albuquerque M, Paradis V, Moreau R, Valla D, Durand F, Boulanger CM, Garcia-Pagan JC, Rautou PE
Hepatocyte microvesicle levels improve prediction of mortality in patients with cirrhosis.
Hepatology (Baltimore, Md.) 2018, 68, 1508-1518.

Egloff C, Eldin de Pecoulas A, Mechler C, Tassin M, Mairovitz V, Corrizi F, Dussaux C, Boutron A, Simon I, Guet A, Sibiude J, Mandelbrot L, Picone O
Prenatal sonographic description of fetuses affected by pyruvate dehydrogenase or pyruvate carboxylase deficiency.
Prenatal Diagnosis 2018

Beydon N, Nguyen TT, Amsallem F, Denjean A, Fenu G, Seddon P, Mentré F, Alberti C, Lombardi E
Interrupter resistance to measure dose-response to salbutamol in wheezy preschool children.
Pediatric Pulmonology 2018, 53, 1252-1259.

Terranova N, Smith MK, Nordgren R, Comets E, Lavielle M, Harling K, Hooker AC, Sarr C, Mentré F, Yvon F, Swat MJ
The Standard Output: A Tool-Agnostic Modeling Storage Format.
CPT: pharmacometrics & systems pharmacology 2018, 7, 543-546.

Guérin C, Beuret P, Constantin JM, Bellani G, Garcia-Olivares P, Roca O, Meertens JH, Maia PA, Becher T, Peterson J, Larsson A, Gurjar M, Hajjej Z, Kovari F, Assiri AH, Mainas E, Hasan MS, Morocho-Tutillo DR, Baboi L, Chrétien JM, François G, Ayzac L, Chen L, Brochard L, Mercat A, investigators of the APRONET Study Group, the REVA Network, the Réseau recherche de la Société Française d’Anesthésie-Réanimation (SFAR-recherche) and the ESICM Trials Group
A prospective international observational prevalence study on prone positioning of ARDS patients: the APRONET (ARDS Prone Position Network) study.
Intensive Care Medicine 2018, 44, 22-37.

Bailly S, Meyfroidt G, Timsit JF
What's new in ICU in 2050: big data and machine learning.
Intensive Care Medicine 2018, 44, 1524-1527.

De Waele JJ, Akova M, Antonelli M, Canton R, Carlet J, De Backer D, Dimopoulos G, Garnacho-Montero J, Kesecioglu J, Lipman J, Mer M, Paiva JA, Poljak M, Roberts JA, Rodriguez Bano J, Timsit JF, Zahar JR, Bassetti M
Antimicrobial resistance and antibiotic stewardship programs in the ICU: insistence and persistence in the fight against resistance. A position statement from ESICM/ESCMID/WAAAR round table on multi-drug resistance.
Intensive Care Medicine 2018, 44, 189-196.

Messika J, Kalfon P, Ricard JD
Adjuvant therapies in critical care: music therapy.
Intensive Care Medicine 2018, 44, 1929-1931.

La Combe B, Bleibtreu A, Messika J, Fernandes R, Clermont O, Branger C, Billard-Pomares T, Barnaud G, Magdoud F, Eveillard M, Kouatchet A, Lasocki S, Asfar P, Corvec S, Lakhal K, Armand-Lefevre L, Wolff M, Timsit JF, Bourdon S, Reignier J, Martin S, Fihman V, de Prost N, Bador J, Charles PE, Goret J, Boyer A, Wallet F, Jaillette E, Nseir S, Landraud L, Ruimy R, Danin PE, Dellamonica J, Cremniter J, Frat JP, Jauréguy F, Clec'h C, Decré D, Maury E, Dreyfuss D, Denamur E, Ricard JD
Decreased susceptibility to chlorhexidine affects a quarter of Escherichia coli isolates responsible for pneumonia in ICU patients.
Intensive Care Medicine 2018, 44, 531-533.

von Cube MK, Timsit JF, Sommer H, Darmon M, Schwebel C, Bailly S, Souweine B, Wolkewitz M
Relative risk and population-attributable fraction of ICU death caused by susceptible and resistant Pseudomonas aeruginosa ventilator-associated pneumonia: a competing risks approach to investigate the OUTCOMEREA database.
Intensive Care Medicine 2018, 44, 1177-1179.

Bouadma L, Karpanen T, Elliott T
Chlorhexidine use in adult patients on ICU.
Intensive Care Medicine 2018, 44, 2232-2234.

Barbier F, Bailly S, Schwebel C, Papazian L, Azoulay É, Kallel H, Siami S, Argaud L, Marcotte G, Misset B, Reignier J, Darmon M, Zahar JR, Goldgran-Toledano D, de Montmollin É, Souweine B, Mourvillier B, Timsit JF, OUTCOMEREA Study Group
Infection-related ventilator-associated complications in ICU patients colonised with extended-spectrum β-lactamase-producing Enterobacteriaceae.
Intensive Care Medicine 2018

Timsit JF, Bassetti M
Antipathy against SDD is justified: Yes.
Intensive Care Medicine 2018

Azoulay E, Lemiale V, Mourvillier B, Garrouste-Orgeas M, Schwebel C, Ruckly S, Argaud L, Cohen Y, Souweine B, Papazian L, Reignier J, Marcotte G, Siami S, Kallel H, Darmon M, Timsit JF, OUTCOMEREA Study Group
Management and outcomes of acute respiratory distress syndrome patients with and without comorbid conditions.
Intensive Care Medicine 2018

Gaudry S, Verney C, Hajage D, Ricard JD, Dreyfuss D
Hypothesis: early renal replacement therapy increases mortality in critically ill patients with acute on chronic renal failure. A post hoc analysis of the AKIKI trial.
Intensive Care Medicine 2018, 44, 1360-1361.

Timsit JF, Rupp M, Bouza E, Chopra V, Kärpänen T, Laupland K, Lisboa T, Mermel L, Mimoz O, Parienti JJ, Poulakou G, Souweine B, Zingg W
A state of the art review on optimal practices to prevent, recognize, and manage complications associated with intravascular devices in the critically ill.
Intensive Care Medicine 2018, 44, 742-759.

Ricard JD, Lisboa T
Caution for chlorhexidine gluconate use for oral care: insufficient data.
Intensive Care Medicine 2018, 44, 1162-1164.

Kindermans M, Abid S, Alkhoder S, Bouadma L
Pulsatile bleeding after sternal bone marrow puncture.
Intensive Care Medicine 2018, 44, 1758-1759.

Bouadma L, Klompas M
Oral care with chlorhexidine: beware!.
Intensive Care Medicine 2018, 44, 1153-1155.

Ruppé É, Lisboa T, Barbier F
The gut microbiota of critically ill patients: first steps in an unexplored world.
Intensive Care Medicine 2018, 44, 1561-1564.

Puntillo KA, Max A, Timsit JF, Ruckly S, Chanques G, Robleda G, Roche-Campo F, Mancebo J, Divatia JV, Soares M, Ionescu DC, Grintescu IM, Maggiore SM, Rusinova K, Owczuk R, Egerod I, Papathanassoglou EDE, Kyranou M, Joynt GM, Burghi G, Freebairn RC, Ho KM, Kaarlola A, Gerritsen RT, Kesecioglu J, Sulaj MMS, Norrenberg M, Benoit DD, Seha MSG, Hennein A, Pereira FJ, Benbenishty JS, Abroug F, Aquilina A, Monte JRC, An Y, Azoulay E
Pain distress: the negative emotion associated with procedures in ICU patients.
Intensive Care Medicine 2018, 44, 1493-1501.

Timsit JF, Ruppe E, Ferrer R
Focus on sepsis: new concepts and findings in sepsis care.
Intensive Care Medicine 2018, 44, 1997-1999.

Timsit JF, Aboab J, Parienti JJ
Is research from databases reliable? Yes.
Intensive Care Medicine 2018

Néant N, Gattacceca F, Lê MP, Yazdanpanah Y, Dhiver C, Bregigeon S, Mokhtari S, Peytavin G, Tamalet C, Descamps D, Lacarelle B, Solas C
Population pharmacokinetics of Rilpivirine in HIV-1-infected patients treated with the single-tablet regimen rilpivirine/tenofovir/emtricitabine.
European Journal of Clinical Pharmacology 2018, 74, 473-481.

Rodrigues C, Chhun S, Chiron C, Dulac O, Rey E, Pons G, Jullien V
A population pharmacokinetic model taking into account protein binding for the sustained-release granule formulation of valproic acid in children with epilepsy.
European Journal of Clinical Pharmacology 2018, 74, 793-803.

Mallet C, Caseris M, Doit C, Simon AL, Michelet D, Madre C, Mazda K, Bonacorsi S, Ilharreborde B
Does Staphylococcus aureus nasal decontamination affect the rate of early surgical site infection in adolescent idiopathic scoliosis surgery?.
European Spine Journal: Official Publication of the European Spine Society, the European Spinal Deformity Society, and the European Section of the Cervical Spine Research Society 2018, 27, 2543-2549.

Plainvert C, El Alaoui F, Tazi A, Joubrel C, Anselem O, Ballon M, Frigo A, Branger C, Mandelbrot L, Goffinet F, Poyart C
Intrapartum group B Streptococcus screening in the labor ward by Xpert® GBS real-time PCR.
European Journal of Clinical Microbiology & Infectious Diseases: Official Publication of the European Society of Clinical Microbiology 2018, 37, 265-270.

de Lastours V, Goulenok T, Guérin F, Jacquier H, Eyma C, Chau F, Cattoir V, Fantin B
Ceftriaxone promotes the emergence of AmpC-overproducing Enterobacteriaceae in gut microbiota from hospitalized patients.
European Journal of Clinical Microbiology & Infectious Diseases: Official Publication of the European Society of Clinical Microbiology 2018, 37, 417-421.

Mondain V, Lieutier F, Pulcini C, Degand N, Landraud L, Ruimy R, Fosse T, Roger PM
Improved quality of care for patients infected or colonised with ESBL-producing Enterobacteriaceae in a French teaching hospital: impact of an interventional prospective study and development of specific tools.
European Journal of Clinical Microbiology & Infectious Diseases: Official Publication of the European Society of Clinical Microbiology 2018, 37, 977-981.

Cherkaoui A, Gaïa N, Baud D, Leo S, Fischer A, Ruppe E, François P, Schrenzel J
Molecular characterization of fluoroquinolones, macrolides, and imipenem resistance in Haemophilus influenzae: analysis of the mutations in QRDRs and assessment of the extent of the AcrAB-TolC-mediated resistance.
European Journal of Clinical Microbiology & Infectious Diseases: Official Publication of the European Society of Clinical Microbiology 2018, 37, 2201-2210.

Morel F, Jacquier H, Desroches M, Fihman V, Kumanski S, Cambau E, Decousser JW, Berçot B
Use of Andromas and Bruker MALDI-TOF MS in the identification of Neisseria.
European Journal of Clinical Microbiology & Infectious Diseases: Official Publication of the European Society of Clinical Microbiology 2018, 37, 2273-2277.

Saba G, Andrade LF, Gaillat J, Bonnin P, Chidiac C, Illes HG, Laurichesse H, Messika J, Ricard JD, Detournay B, Petitpretz P, de Pouvourville G
Costs associated with community acquired pneumonia in France.
The European journal of health economics: HEPAC: health economics in prevention and care 2018, 19, 533-544.

Suzan-Monti M, Celse M, Vilotitch A, Demoulin B, Dray-Spira R, Yéni P, Lert F, Spire B, ANRS VESPA2 study group
Assessement of Awareness of, Concerns and Attitudes Towards HIV-Related Court-Case Sentences in France in a Representative Sample of People Living with HIV (ANRS VESPA2 Survey).
AIDS and behavior 2018, 22, 3264-3272.

Desnos-Ollivier M, Bórmida V, Poirier P, Nourrisson C, Pan D, Bretagne S, Puime A, Dromer F, French Mycoses Study Group, Uruguayan Invasive Fungal Infection Network
Population Structure of Candida parapsilosis: No Genetic Difference Between French and Uruguayan Isolates Using Microsatellite Length Polymorphism.
Mycopathologia 2018, 183, 381-390.

Cerou M, Lavielle M, Brendel K, Chenel M, Comets E
Development and performance of npde for the evaluation of time-to-event models.
Pharmaceutical Research 2018, 35, 30.

Calvier EAM, Nguyen TT, Johnson TN, Rostami-Hodjegan A, Tibboel D, Krekels EHJ, Knibbe CAJ
Can Population Modelling Principles be Used to Identify Key PBPK Parameters for Paediatric Clearance Predictions? An Innovative Application of Optimal Design Theory.
Pharmaceutical Research 2018, 35, 209.

Goulas A, Sabourin L, Asghar F, Haudin CS, Benoit P, Topp E
Explaining the accelerated degradation of ciprofloxacin, sulfamethazine, and erythromycin in different soil exposure scenarios by their aqueous extractability.
Environmental Science and Pollution Research International 2018, 25, 16236-16245.

Garrouste-Orgeas M, Azoulay E, Ruckly S, Schwebel C, de Montmollin E, Bedos JP, Souweine B, Marcotte G, Adrie C, Goldgran-Toledano D, Dumenil AS, Kallel H, Jamali S, Argaud L, Darmon M, Zahar JR, Timsit JF
Diabetes was the only comorbid condition associated with mortality of invasive pneumococcal infection in ICU patients: a multicenter observational study from the Outcomerea research group.
Infection 2018, 46, 669-677.

Alexandre K, Fantin B
Pharmacokinetics and Pharmacodynamics of Temocillin.
Clinical Pharmacokinetics 2018, 57, 287-296.

Peigné S, Chhun S, Tod M, Rey E, Rodrigues C, Chiron C, Pons G, Jullien V
Population Pharmacokinetics of Stiripentol in Paediatric Patients with Dravet Syndrome Treated with Stiripentol, Valproate and Clobazam Combination Therapy.
Clinical Pharmacokinetics 2018, 57, 739-748.

Vazouras K, Basmaci R, Bielicki J, Folgori L, Zaoutis T, Sharland M, Hsia Y
Antibiotics and Cure Rates in Childhood Febrile Urinary Tract Infections in Clinical Trials: A Systematic Review and Meta-analysis.
Drugs 2018, 78, 1593-1604.

Leone M, Bouadma L, Bouhemad B, Brissaud O, Dauger S, Gibot S, Hraiech S, Jung B, Kipnis E, Launey Y, Luyt CE, Margetis D, Michel F, Mokart D, Montravers P, Monsel A, Nseir S, Pugin J, Roquilly A, Velly L, Zahar JR, Bruyère R, Chanques G
Hospital-acquired pneumonia in ICU.
Anaesthesia, Critical Care & Pain Medicine 2018, 37, 83-98.

Mandelbrot L, Kieffer F, Sitta R, Laurichesse-Delmas H, Winer N, Mesnard L, Berrebi A, Le Bouar G, Bory JP, Cordier AG, Ville Y, Perrotin F, Jouannic JM, Biquard F, d'Ercole C, Houfflin-Debarge V, Villena I, Thiébaut R, TOXOGEST Study Group
Prenatal therapy with pyrimethamine + sulfadiazine vs spiramycin to reduce placental transmission of toxoplasmosis: a multicenter, randomized trial.
American Journal of Obstetrics and Gynecology 2018, 219, 386.e1-386.e9.

Froissart A, Rossi B, Ranque B, Jarrin I, Bergmann JF, Beaune S, Dautheville S, Breau N, Dauvergne A, Deluche L, Robert T, Gault N, Roy C, Zarrouk V, Steichen O, Fantin B
Effect of a Red Blood Cell Transfusion on Biological Markers Used to Determine the Cause of Anemia: A Prospective Study.
Am J Med 2018, 131, 319-322.

Kaddour K, Lemasson J, Haettich-Pialoux B, Guedj N, Belmatoug N, Treton X, Becheur H, Fantin B, Descamps V, Le Bozec P
[The value of fecal calprotectin assay in chronic panniculitis of unknown etiology].
Annales De Dermatologie Et De Venereologie 2018, 145, 702-705.

Leblanc J, Hejblum G, Costagliola D, Durand-Zaleski I, Lert F, de Truchis P, Verbeke G, Rousseau A, Piquet H, Simon F, Pateron D, Simon T, Crémieux AC, DICI-VIH (Dépistage Infirmier CIblé du VIH) Group
Targeted HIV Screening in Eight Emergency Departments: The DICI-VIH Cluster-Randomized Two-Period Crossover Trial.
Annals of Emergency Medicine 2018, 72, 41-53.e9.

Ambert-Dahan E, Laouenan C, Lebredonchel M, Borel S, Carillo C, Bouccara D, Sterkers O, Ferrary E, Mosnier I
Evaluation of the impact of hearing loss in adults: Validation of a quality of life questionnaire.
Eur Ann Otorhinolaryngol Head Neck Dis 2018, 135, 25-31.

Ploton MC, Caseris M, Jost C, Picard Y, Gaschignard J, Pierron C, Canivez S, Le Dalour R, Bendavid M, Carol A, Bidet P, Bonacorsi S
Likely False-Positive Pneumococcal Antigen Test BinaxNOW Due to Parvimonas micra: A Four-Case Series.
Chest 2018, 153, e71-e73.

Romano V, Pasquale V, Lemee L, El Meouche I, Pestel-Caron M, Capuano F, Buono P, Dumontet S
Clostridioides difficile in the environment, food, animals and humans in southern Italy: Occurrence and genetic relatedness.
Comparative Immunology, Microbiology and Infectious Diseases 2018, 59, 41-46.

Loubet P, Burdet C, Vindrios W, Grall N, Wolff M, Yazdanpanah Y, Andremont A, Duval X, Lescure FX
Cefazolin versus anti-staphylococcal penicillins for treatment of methicillin-susceptible Staphylococcus aureus bacteraemia: a narrative review.
Clin Microbiol Infect 2018, 24, 125-132.

Jolivet S, Lescure FX, Armand-Lefevre L, Raffoul R, Dilly MP, Ghodbane W, Nataf P, Lucet JC
Surgical site infection with extended-spectrum β-lactamase-producing Enterobacteriaceae after cardiac surgery: incidence and risk factors.
Clinical Microbiology and Infection: The Official Publication of the European Society of Clinical Microbiology and Infectious Diseases 2018, 24, 283-288.

Lecorche E, Haenn S, Mougari F, Kumanski S, Veziris N, Benmansour H, Raskine L, Moulin L, Cambau E, CNR-MyRMA
Comparison of methods available for identification of Mycobacterium chimaera.
Clinical Microbiology and Infection: The Official Publication of the European Society of Clinical Microbiology and Infectious Diseases 2018, 24, 409-413.

Lachâtre M, Méchain M, Etienne M, Gautret P, Matheron S, Nahon M, Coignard-Biehler H, Malvy D, Duval X, Tattevin P
No evidence for major adverse events related to suspicion of Ebola in France, 2014-2015.
Clinical Microbiology and Infection: The Official Publication of the European Society of Clinical Microbiology and Infectious Diseases 2018, 24, 310-311.

Ruppe E, Burdet C, Grall N, de Lastours V, Lescure FX, Andremont A, Armand-Lefevre L
Impact of antibiotics on the intestinal microbiota needs to be re-defined to optimize antibiotic usage.
Clin Microbiol Infect 2018, 24, 3-5.

Tran Quang V, Bidet P, Birgy A, Caseris M, Basmaci R, Bonacorsi S
Susceptibility testing of Kingella kingae to cefazolin.
Clinical Microbiology and Infection: The Official Publication of the European Society of Clinical Microbiology and Infectious Diseases 2018, 24, 312-313.

Cambau E, Saunderson P, Matsuoka M, Cole ST, Kai M, Suffys P, Rosa PS, Williams D, Gupta UD, Lavania M, Cardona-Castro N, Miyamoto Y, Hagge D, Srikantam A, Hongseng W, Indropo A, Vissa V, Johnson RC, Cauchoix B, Pannikar VK, Cooreman EaWD, Pemmaraju VRR, Gillini L, WHO surveillance network of antimicrobial resistance in leprosy
Antimicrobial resistance in leprosy: results of the first prospective open survey conducted by a WHO surveillance network for the period 2009-15.
Clinical Microbiology and Infection: The Official Publication of the European Society of Clinical Microbiology and Infectious Diseases 2018, 24, 1305-1310.

Jolivet S, Vaillant L, Poncin T, Lolom I, Gaudonnet Y, Rondinaud E, Bendjelloul G, Lomont A, Lucet JC, Armand-Lefèvre L
Prevalence of carriage of extended-spectrum β-lactamase-producing enterobacteria and associated factors in a French hospital.
Clinical Microbiology and Infection: The Official Publication of the European Society of Clinical Microbiology and Infectious Diseases 2018, 24, 1311-1314.

Magréault S, Petyt C, Senneville E, Fron D, Nectoux E, Loiez C, Marchand S, Grégoire N, Couet W
Pharmacokinetics of colistin in a 8-year-old child with acute bone infection.
Clinical Microbiology and Infection: The Official Publication of the European Society of Clinical Microbiology and Infectious Diseases 2018, 24, 1025-1026.

Peiffer-Smadja N, Abbara S, Rizk N, Pogliaghi M, Rondinaud E, Tesmoingt C, Massias L, Lucet JC, Alkhoder S, Armand-Lefèvre L, Lescure FX
High-dose daptomycin in patients with infective endocarditis or sternal wound infections.
Clinical Microbiology and Infection: The Official Publication of the European Society of Clinical Microbiology and Infectious Diseases 2018, 24, 1106-1108.

Ruppé E, Martin-Loeches I, Rouzé A, Levast B, Ferry T, Timsit JF
What's new in restoring the gut microbiota in ICU patients? Potential role of faecal microbiota transplantation.
Clinical Microbiology and Infection: The Official Publication of the European Society of Clinical Microbiology and Infectious Diseases 2018, 24, 803-805.

Chauffour A, Lecorche E, Reibel F, Mougari F, Raskine L, Aubry A, Jarlier V, Cambau E, CNR-MyRMA
Prospective study on antimicrobial resistance in leprosy cases diagnosed in France from 2001 to 2015.
Clinical Microbiology and Infection: The Official Publication of the European Society of Clinical Microbiology and Infectious Diseases 2018, 24, 1213.e5-1213.e8.

Dumont C, Lestini G, Le Nagard H, Mentré F, Comets E, Nguyen TT, PG
PFIM 4.0, an extended R program for design evaluation and optimization in nonlinear mixed-effect models.
Computer Methods and Programs in Biomedicine 2018, 156, 217-229.

Toumazi A, Comets E, Alberti C, Friede T, Lentz F, Stallard N, Zohar S, Ursino M
dfpk: An R-package for Bayesian dose-finding designs using pharmacokinetics (PK) for phase I clinical trials.
Computer Methods and Programs in Biomedicine 2018, 157, 163-177.

Poirel L, Larpin Y, Dobias J, Stephan R, Decousser JW, Madec JY, Nordmann P
Rapid Polymyxin NP test for the detection of polymyxin resistance mediated by the mcr-1/mcr-2 genes.
Diagnostic Microbiology and Infectious Disease 2018, 90, 7-10.

Lescat M, Poirel L, Nordmann P
Rapid multiplex polymerase chain reaction for detection of mcr-1 to mcr-5 genes.
Diagnostic Microbiology and Infectious Disease 2018, 92, 267-269.

Loubet P, Verger P, Abitbol V, Peyrin-Biroulet L, Launay O
Pneumococcal and influenza vaccine uptake in adults with inflammatory bowel disease in France: Results from a web-based study.
Digestive and Liver Disease: Official Journal of the Italian Society of Gastroenterology and the Italian Association for the Study of the Liver 2018, 50, 563-567.

Sénat MV, Anselem O, Picone O, Renesme L, Sananès N, Vauloup-Fellous C, Sellier Y, Laplace JP, Sentilhes L
Prevention and management of genital herpes simplex infection during pregnancy and delivery: Guidelines from the French College of Gynaecologists and Obstetricians (CNGOF).
European Journal of Obstetrics, Gynecology, and Reproductive Biology 2018, 224, 93-101.

Larsson DGJ, Andremont A, Bengtsson-Palme J, Brandt KK, de Roda Husman AM, Fagerstedt P, Fick J, Flach CF, Gaze WH, Kuroda M, Kvint K, Laxminarayan R, Manaia CM, Nielsen KM, Plant L, Ploy MC, Segovia C, Simonet P, Smalla K, Snape J, Topp E, van Hengel AJ, Verner-Jeffreys DW, Virta MPJ, Wellington EM, Wernersson AS
Critical knowledge gaps and research needs related to the environmental dimensions of antibiotic resistance.
Environment International 2018, 117, 132-138.

Peyronnet V, Sibiude J, Mandelbrot L, Kayem G
[Impact of the detection of small for gestational age fetuses on the neonatal prognosis].
Gynecologie, Obstetrique, Fertilite & Senologie 2018, 46, 71-77.

Isnard T, Vincent-Rohfritsch A, Le Ray C, Goffinet F, Patkai J, Sibiude J
[In the case of premature live birth, is very early rupture of the membranes an additional risk factor for morbidity and mortality?].
Gynecologie, Obstetrique, Fertilite & Senologie 2018, 46, 447-453.

Cez A, Brocheriou I, Lescure FX, Adam C, Girard PM, Pialoux G, Moestrup SK, Fellahi S, Bastard JP, Ronco P, Plaisier E
Decreased expression of megalin and cubilin and altered mitochondrial activity in tenofovir nephrotoxicity.
Human Pathology 2018, 73, 89-101.

Zahar JR, Blot S
Dilemmas in infection control in the intensive care unit.
Intensive & Critical Care Nursing 2018, 46, 1-3.

Perozziello A, Routelous C, Charani E, Truel A, Birgand G, Yazdanpanah Y, Lescure FX, Lucet JC, CEFECA Study Group
Experiences and perspectives of implementing antimicrobial stewardship in five French hospitals: a qualitative study.
International Journal of Antimicrobial Agents 2018, 51, 829-835.

Macaux L, Ndoye O, Cordel H, Pomares TB, Seytre D, Bouchaud O, Cohen Y, Zahar JR, Carbonnelle E
Extensively-drug-resistant bacteria carriers among overseas travellers: one-third had not been hospitalized previously.
International Journal of Antimicrobial Agents 2018, 52, 385-389.

Woerther PL, Lepeule R, Burdet C, Decousser JW, Ruppé É, Barbier F
Carbapenems and alternative β-lactams for the treatment of infections due to extended-spectrum β-lactamase-producing Enterobacteriaceae: What impact on intestinal colonisation resistance?.
International Journal of Antimicrobial Agents 2018, 52, 762-770.

Kubota N, Testuz A, Boutten A, Robert T, Codogno I, Duval X, Tubiana S, Hekimian G, Arangalage D, Cimadevilla C, Kerneis C, Vahanian A, Messika-Zeitoun D
Impact of Fetuin-A on progression of calcific aortic valve stenosis - The COFRASA - GENERAC study.
International Journal of Cardiology 2018, 265, 52-57.

Phillips-Houlbracq M, Ricard JD, Foucrier A, Yoder-Himes D, Gaudry S, Bex J, Messika J, Margetis D, Chatel J, Dobrindt U, Denamur E, Roux D
Pathophysiology of Escherichia coli pneumonia: Respective contribution of pathogenicity islands to virulence.
International journal of medical microbiology: IJMM 2018, 308, 290-296.

Berger M, Berger P, Denamur E, Mellmann A, Dobrindt U
Core elements of the vegetative replication control of the Inc1 plasmid pO104_90 of Escherichia coli O104:H4 also regulate its transfer frequency.
International journal of medical microbiology: IJMM 2018, 308, 962-968.

Bougouin W, Dumas F, Karam N, Maupain C, Marijon E, Lamhaut L, Jost D, Geri G, Beganton F, Varenne O, Spaulding C, Jouven X, Cariou A, Sudden Death Expertise Center
Should We Perform an Immediate Coronary Angiogram in All Patients After Cardiac Arrest?: Insights From a Large French Registry.
JACC. Cardiovascular interventions 2018, 11, 249-256.

Heuzé C, Lepage L, Loubet P, Duval X, Cimadevilla C, Verdonk C, Hyafil F, Rouzet F, Ou P, Nataf P, Vahanian A, Messika-Zeitoun D
Infective Endocarditis After Bentall Surgery: Usefulness of New Imaging Modalities and Outcomes.
JACC. Cardiovascular imaging 2018, 11, 1535-1537.

Soulie C, Morand-Joubert L, Cottalorda J, Charpentier C, Bellecave P, Le Guen L, Yerly S, Montes B, Fafi-Kremer S, Dina J, Avettand-Fenoel V, Amiel C, Roussel C, Pallier C, Zafilaza K, Sayon S, Signori-Schmuck A, Mirand A, Trabaud MA, Berger S, Calvez V, Marcelin AG, ANRS AC11 resistance group
Performance of genotypic algorithms for predicting tropism for HIV-1 CRF01_AE recombinant.
Journal of Clinical Virology: The Official Publication of the Pan American Society for Clinical Virology 2018, 99-100, 57-60.

Jannic A, Maillet J, Rossi B, Guedj N, Descamps V, Fantin B, Le Bozec P
Flagellate erythema in systemic sclerosis: A case report.
JAAD case reports 2018, 4, 239-241.

Schwarzinger M, Rehm J, Mallet V
"Who killed JR": Chronic hepatitis C or alcohol use disorders?.
Journal of Hepatology 2018, 68, 1098-1099.

Deuffic-Burban S, Huneau A, Verleene A, Brouard C, Pillonel J, Le Strat Y, Cossais S, Roudot-Thoraval F, Canva V, Mathurin P, Dhumeaux D, Yazdanpanah Y
Assessing the cost-effectiveness of hepatitis C screening strategies in France.
Journal of Hepatology 2018, 69, 785-792.

Hilliquin D, Le Guern R, Thepot Seegers V, Neulier C, Lomont A, Marie V, Legeay C, Merrer J, Lepelletier D, Rogues AM, Grandbastien B, Lucet JC, Zahar JR
Risk factors for acquisition of OXA-48-producing Klebsiella pneumonia among contact patients: a multicentre study.
The Journal of Hospital Infection 2018, 98, 253-259.

Jauréguy F, Mansour H, Bigot J, Walewski V, Billard-Pomares T, Rahajamanana L, Picard B, Carbonnelle E
Use of the Xpert CarbaR assay for direct detection of carbapenemase genes from blood cultures and urine samples.
The Journal of Hospital Infection 2018, 98, 245-246.

Pilmis B, Cattoir V, Lecointe D, Limelette A, Grall I, Mizrahi A, Marcade G, Poilane I, Guillard T, Bourgeois Nicolaos N, Zahar JR, Le Monnier A
Carriage of ESBL-producing Enterobacteriaceae in French hospitals: the PORTABLSE study.
The Journal of Hospital Infection 2018, 98, 247-252.

Legeay C, Thépot-Seegers V, Pailhoriès H, Hilliquin D, Zahar JR
Is cohorting the only solution to control carbapenemase-producing Enterobacteriaceae outbreaks? A single-centre experience.
The Journal of Hospital Infection 2018, 99, 390-395.

Lemaignen A, Armand-Lefevre L, Birgand G, Mabileau G, Lolom I, Ghodbane W, Dilly MP, Nataf P, Lucet JC
Thirteen-year experience with universal Staphylococcus aureus nasal decolonization prior to cardiac surgery: a quasi-experimental study.
The Journal of Hospital Infection 2018, 100, 322-328.

Cheminet G, Kapel N, Bleibtreu A, Sadou-Yaye H, Bellanger A, Duval X, Joly F, Fantin B, de Lastours V, French Group for Fecal Microbiota Transplantation (GFTF)
Faecal microbiota transplantation with frozen capsules for relapsing Clostridium difficile infections: the first experience from 15 consecutive patients in France.
The Journal of Hospital Infection 2018, 100, 148-151.

Garinet S, Fihman V, Jacquier H, Corvec S, Le Monnier A, Guillard T, Cattoir V, Zahar JR, Woerther PL, Carbonnelle E, Wargnier A, Kernéis S, Morand PC, GMC
Elective distribution of resistance to beta-lactams among Enterobacter cloacae genetic clusters.
The Journal of Infection 2018, 77, 178-182.

Droz N, Enouf V, Bidet P, Mohamed D, Behillil S, Simon AL, Bachy M, Caseris M, Bonacorsi S, Basmaci R
Temporal Association Between Rhinovirus Activity and Kingella kingae Osteoarticular Infections.
The Journal of Pediatrics 2018, 192, 234-239.e2.

Warszawski J, Thomas C, Dialla O, Garrait V, Dollfus C, Reliquet V, Clech L, Dert C, Mandelbrot L, Audrain M, Blanche S, ANRS EPF Study Group
T-Cell Receptor Excision Circles in HIV-Exposed, Uninfected Newborns Measured During a National Newborn Screening Program for Severe Combined Immunodeficiency.
The Journal of Pediatrics 2018, 202, 311-314.e2.

Le Hingrat Q, Perrier M, Collin G, Drumard S, Storto A, Bertine M, Larrouy L, Matheron S, Damond F, Charpentier C, Descamps D, Visseaux B
Efficiency of HIV-2 cultures from clinical isolates is enhanced after purification by anti-CD44 microbeads.
Journal of Virological Methods 2018, 257, 12-15.

Bruyand M, Mariani-Kurkdjian P, Gouali M, de Valk H, King LA, Le Hello S, Bonacorsi S, Loirat C
Hemolytic uremic syndrome due to Shiga toxin-producing Escherichia coli infection.
Medecine Et Maladies Infectieuses 2018, 48, 167-174.

Coignard-Biehler H, Rapp C, Chapplain JM, Hoen B, Che D, Berthelot P, Cazenave-Roblot F, Rabaud C, Brouqui P, Leport C, SPILF-COREB Emergences group
The French Infectious Diseases Society's readiness and response to epidemic or biological risk-the current situation following the Middle East respiratory syndrome coronavirus and Ebola virus disease alerts.
Medecine Et Maladies Infectieuses 2018, 48, 95-102.

Lepelletier D, Bonnet R, Plésiat P, Nicolas-Chanoine MH, Berger-Carbonne A, Chidiac C, Grandbastien B, national working group from the French High Council of Public Health
Emergence of plasmid-mediated colistin resistance (mcr-1) among Enterobacteriaceae strains: Laboratory detection of resistance and measures to control its dissemination.
Medecine Et Maladies Infectieuses 2018, 48, 250-255.

Armand-Lefèvre L, Andremont A, Ruppé E
Travel and acquisition of multidrug-resistant Enterobacteriaceae.
Medecine Et Maladies Infectieuses 2018, 48, 431-441.

Caron F, Galperine T, Flateau C, Azria R, Bonacorsi S, Bruyère F, Cariou G, Clouqueur E, Cohen R, Doco-Lecompte T, Elefant E, Faure K, Gauzit R, Gavazzi G, Lemaitre L, Raymond J, Senneville E, Sotto A, Subtil D, Trivalle C, Merens A, Etienne M
Practice guidelines for the management of adult community-acquired urinary tract infections.
Medecine Et Maladies Infectieuses 2018, 48, 327-358.

D'Ortenzio E, Lemaître N, Brouat C, Loubet P, Sebbane F, Rajerison M, Baril L, Yazdanpanah Y
Plague: Bridging gaps towards better disease control.
Medecine Et Maladies Infectieuses 2018, 48, 307-317.

Bleibtreu A, Grall N, Laissy JP, Rioux C, Strukov A, Lariven S, Yeni P, Yazdanpanah Y, Joly V
Contribution of brain imaging to the diagnosis of intracranial tuberculoma and other brain lesions in patients presenting with miliary tuberculosis.
Medecine Et Maladies Infectieuses 2018, 48, 533-539.

Ruppé E, Schrenzel J
Messages from the second International Conference on Clinical Metagenomics (ICCMg2)..
Microbes and infection 2018, 20, 222-227.

Gautier G, Guillard T, Podac B, Bercot B, Vernet-Garnier V, de Champs C
Detection of different classes of carbapenemases: Adaptation and assessment of a phenotypic method applied to Enterobacteriaceae, Pseudomonas aeruginosa and Acinetobacter baumannii, and proposal of a new algorithm.
Journal of Microbiological Methods 2018, 147, 26-35.

Klotoe BJ, Molina-Moya B, Gomes HM, Gomgnimbou MK, Oliveira Suzarte L, Féres Saad MH, Ali S, Dominguez J, Pimkina E, Zholdybayeva E, Sola C, Refrégier G
TB-EFI, a novel 18-Plex microbead-based method for prediction of second-line drugs and ethambutol resistance in Mycobacterium tuberculosis complex..
Journal of microbiological methods 2018, 152, 10-17.

Ruppé E, Cherkaoui A, Wagner N, La Scala GC, Beaulieu JY, Girard M, Frey J, Lazarevic V, Schrenzel J
In vivo selection of a multidrug-resistant Aeromonas salmonicida during medicinal leech therapy.
New Microbes and New Infections 2018, 21, 23-27.

Cloitre A, Duval X, Hoen B, Alla F, Lesclous P
A nationwide survey of French dentists' knowledge and implementation of current guidelines for antibiotic prophylaxis of infective endocarditis in patients with predisposing cardiac conditions.
Oral Surgery, Oral Medicine, Oral Pathology and Oral Radiology 2018, 125, 295-303.

Burdet C, Guegan JF, Duval X, Le Tyrant M, Bergeron H, Manuguerra JC, Raude J, Leport C, Zylberman P
Need for integrative thinking to fight against emerging infectious diseases. Proceedings of the 5th seminar on emerging infectious diseases, March 22, 2016 - current trends and proposals.
Rev Epidemiol Sante Publique 2018, 66, 81-90.

de Lastours V
[Should doses of antibiotics be adjusted?].
La Revue De Medecine Interne 2018, 39, 171-177.

Goulenok T, Chopin D, De Lastours V, Zarrouk V, Lepeule R, Fantin B, Lefort A
[Influenzae and pneumococcal vaccination rate in an internal medicine ward].
La Revue De Medecine Interne 2018, 39, 386-392.

Voiriot G, Chalumeau M, Messika J, Basille D, Philippe B, Ricard JD, Andrejak C, Jounieaux V, Sanchez O, Fartoukh M
[Risks associated with the use of non-steroidal anti-inflammatory drugs during pneumonia].
Revue Des Maladies Respiratoires 2018, 35, 430-440.

Coupaye M, Legardeur H, Sami O, Calabrese D, Mandelbrot L, Ledoux S
Impact of Roux-en-Y gastric bypass and sleeve gastrectomy on fetal growth and relationship with maternal nutritional status.
Surgery for Obesity and Related Diseases: Official Journal of the American Society for Bariatric Surgery 2018, 14, 1488-1494.

Droz N, Chaleard J, Laurent M, Mandelbrot L, Cojocaru B
[Newborn consultations in paediatric emergency departments].
Soins. Pediatrie, Puericulture 2018, 39, 32-37.

Levy M, Deghmane AE, Aouiti-Trabelsi M, Dauger S, Faye A, Mariani-Kurkdjian P, Taha MK
Analysis of the impact of corticosteroids adjuvant treatment during experimental invasive meningococcal infection in mice..
Steroids 2018, 136, 32-39.

Leroux S, Elie V, Zhao W, Magreault S, Jacqz-Aigrain E
Principles and applications of pharmacometrics in drug evaluation in children.
Therapie 2018, 73, 165-170.

Ruppé E, Andremont A, Armand-Lefèvre L
Digestive tract colonization by multidrug-resistant Enterobacteriaceae in travellers: An update.
Travel Medicine and Infectious Disease 2018, 21, 28-35.

N'Diaye DS, Launay O, Picone O, Tsatsaris V, Azria E, Rozenberg F, Schwarzinger M, Yazdanpanah Y
Cost-effectiveness of vaccination against cytomegalovirus (CMV) in adolescent girls to prevent infections in pregnant women living in France.
Vaccine 2018, 36, 1285-1296.

Reignier J, Boisramé-Helms J, Brisard L, Lascarrou JB, Ait Hssain A, Anguel N, Argaud L, Asehnoune K, Asfar P, Bellec F, Botoc V, Bretagnol A, Bui HN, Canet E, Da Silva D, Darmon M, Das V, Devaquet J, Djibre M, Ganster F, Garrouste-Orgeas M, Gaudry S, Gontier O, Guérin C, Guidet B, Guitton C, Herbrecht JE, Lacherade JC, Letocart P, Martino F, Maxime V, Mercier E, Mira JP, Nseir S, Piton G, Quenot JP, Richecoeur J, Rigaud JP, Robert R, Rolin N, Schwebel C, Sirodot M, Tinturier F, Thévenin D, Giraudeau B, Le Gouge A, NUTRIREA-2 Trial Investigators, Clinical Research in Intensive Care and Sepsis (CRICS) group
Enteral versus parenteral early nutrition in ventilated adults with shock: a randomised, controlled, multicentre, open-label, parallel-group study (NUTRIREA-2).
Lancet (London, England) 2018, 391, 133-143.

Ghosn J, Taiwo B, Seedat S, Autran B, Katlama C
HIV.
Lancet (London, England) 2018, 392, 685-697.

Molina JM, Charreau I, Chidiac C, Pialoux G, Cua E, Delaugerre C, Capitant C, Rojas-Castro D, Fonsart J, Bercot B, Bébéar C, Cotte L, Robineau O, Raffi F, Charbonneau P, Aslan A, Chas J, Niedbalski L, Spire B, Sagaon-Teyssier L, Carette D, Mestre SL, Doré V, Meyer L, ANRS IPERGAY Study Group
Post-exposure prophylaxis with doxycycline to prevent sexually transmitted infections in men who have sex with men: an open-label randomised substudy of the ANRS IPERGAY trial.
The Lancet. Infectious Diseases 2018, 18, 308-317.

Harris SR, Cole MJ, Spiteri G, Sánchez-Busó L, Golparian D, Jacobsson S, Goater R, Abudahab K, Yeats CA, Bercot B, Borrego MJ, Crowley B, Stefanelli P, Tripodo F, Abad R, Aanensen DM, Unemo M, Euro-GASP study group
Public health surveillance of multidrug-resistant clones of Neisseria gonorrhoeae in Europe: a genomic survey.
The Lancet. Infectious Diseases 2018, 18, 758-768.

Ouldali N, Levy C, Varon E, Bonacorsi S, Béchet S, Cohen R, Angoulvant F, French Pediatric Meningitis Network
Incidence of paediatric pneumococcal meningitis and emergence of new serotypes: a time-series analysis of a 16-year French national survey.
The Lancet. Infectious Diseases 2018, 18, 983-991.

Lafolie J, Labbé A, L'Honneur AS, Madhi F, Pereira B, Decobert M, Adam MN, Gouraud F, Faibis F, Arditty F, Marque-Juillet S, Guitteny MA, Lagathu G, Verdan M, Rozenberg F, Mirand A, Peigue-Lafeuille H, Henquell C, Bailly JL, Archimbaud C, Blood Enterovirus Diagnosis Infection (BLEDI) in paediatric population study team
Assessment of blood enterovirus PCR testing in paediatric populations with fever without source, sepsis-like disease, or suspected meningitis: a prospective, multicentre, observational cohort study.
The Lancet. Infectious Diseases 2018, 18, 1385-1396.

Mercié P, Arsandaux J, Katlama C, Ferret S, Beuscart A, Spadone C, Duvivier C, Reynes J, Wirth N, Moinot L, Bénard A, Zucman D, Duval X, Molina JM, Spire B, Fagard C, Chêne G, ANRS 144 Inter-ACTIV study group
Efficacy and safety of varenicline for smoking cessation in people living with HIV in France (ANRS 144 Inter-ACTIV): a randomised controlled phase 3 clinical trial.
The lancet. HIV 2018, 5, e126-e135.

Basmaci R, Bielicki J, Daniels R, Kissoon N, Ellis S, Balasegaram M, Sharland M
Management of children with multidrug-resistant sepsis in low-income and middle-income countries.
The Lancet. Child & Adolescent Health 2018, 2, 8-10.

Schwarzinger M, Pollock BG, Hasan OSM, Dufouil C, Rehm J, QalyDays Study Group
Contribution of alcohol use disorders to the burden of dementia in France 2008-13: a nationwide retrospective cohort study.
The Lancet. Public Health 2018, 3, e124-e132.

Togarsimalemath SK, Si-Mohammed A, Puraswani M, Gupta A, Vabret A, Liguori S, Mariani-Kurkdjian P, Bagga A, Dragon-Durey MA
Gastrointestinal pathogens in anti-FH antibody positive and negative Hemolytic Uremic Syndrome..
Pediatric research 2018, 84, 118-124.

Voeltzel T, Flores-Violante M, Zylbersztejn F, Lefort S, Billandon M, Jeanpierre S, Joly S, Fossard G, Milenkov M, Mazurier F, Nehme A, Belhabri A, Paubelle E, Thomas X, Michallet M, Louache F, Nicolini FE, Caron de Fromentel C, Maguer-Satta V
A new signaling cascade linking BMP4, BMPR1A, ΔNp73 and NANOG impacts on stem-like human cell properties and patient outcome..
Cell death & disease 2018, 9, 1011.

Madelain V, Baize S, Jacquot F, Reynard S, Fizet A, Barron S, Solas C, Lacarelle B, Carbonnelle C, Mentré F, Raoul H, de Lamballerie X, Guedj J
Ebola viral dynamics in nonhuman primates provides insights into virus immuno-pathogenesis and antiviral strategies.
Nature Communications 2018, 9, 4013.

Rhodes SJ, Guedj J, Fletcher HA, Lindenstrøm T, Scriba TJ, Evans TG, Knight GM, White RG
Using vaccine Immunostimulation/Immunodynamic modelling methods to inform vaccine dose decision-making.
NPJ vaccines 2018, 3, 36.

Munk P, Knudsen BE, Lukjancenko O, Duarte ASR, Van Gompel L, Luiken REC, Smit LAM, Schmitt H, Garcia AD, Hansen RB, Petersen TN, Bossers A, Ruppé E, EFFORT Group, Lund O, Hald T, Pamp SJ, Vigre H, Heederik D, Wagenaar JA, Mevius D, Aarestrup FM
Abundance and diversity of the faecal resistome in slaughter pigs and broilers in nine European countries.
Nature Microbiology 2018, 3, 898-908.

Munk P, Knudsen BE, Lukjancenko O, Duarte ASR, Van Gompel L, Luiken REC, Smit LAM, Schmitt H, Garcia AD, Hansen RB, Petersen TN, Bossers A, Ruppé E, Lund O, Hald T, Pamp SJ, Vigre H, Heederik D, Wagenaar JA, Mevius D, Aarestrup FM
Author Correction: Abundance and diversity of the faecal resistome in slaughter pigs and broilers in nine European countries..
Nature microbiology 2018, 3, 1186.

Coll F, Phelan J, Hill-Cawthorne GA, Nair MB, Mallard K, Ali S, Abdallah AM, Alghamdi S, Alsomali M, Ahmed AO, Portelli S, Oppong Y, Alves A, Bessa TB, Campino S, Caws M, Chatterjee A, Crampin AC, Dheda K, Furnham N, Glynn JR, Grandjean L, Minh Ha D, Hasan R, Hasan Z, Hibberd ML, Joloba M, Jones-López EC, Matsumoto T, Miranda A, Moore DJ, Mocillo N, Panaiotov S, Parkhill J, Penha C, Perdigão J, Portugal I, Rchiad Z, Robledo J, Sheen P, Shesha NT, Sirgel FA, Sola C, Oliveira Sousa E, Streicher EM, Helden PV, Viveiros M, Warren RM, McNerney R, Pain A, Clark TG
Genome-wide analysis of multi- and extensively drug-resistant Mycobacterium tuberculosis..
Nature genetics 2018, 50, 307-316.

Coll F, Phelan J, Hill-Cawthorne GA, Nair MB, Mallard K, Ali S, Abdallah AM, Alghamdi S, Alsomali M, Ahmed AO, Portelli S, Oppong Y, Alves A, Bessa TB, Campino S, Caws M, Chatterjee A, Crampin AC, Dheda K, Furnham N, Glynn JR, Grandjean L, Ha DM, Hasan R, Hasan Z, Hibberd ML, Joloba M, Jones-López EC, Matsumoto T, Miranda A, Moore DJ, Mocillo N, Panaiotov S, Parkhill J, Penha C, Perdigão J, Portugal I, Rchiad Z, Robledo J, Sheen P, Shesha NT, Sirgel FA, Sola C, Sousa EO, Streicher EM, Van Helden P, Viveiros M, Warren RM, McNerney R, Pain A, Clark TG
Author Correction: Genome-wide analysis of multi- and extensively drug-resistant Mycobacterium tuberculosis..
Nature genetics 2018, 50, 764.

Triki D, Cano Contreras ME, Flatters D, Visseaux B, Descamps D, Camproux AC, Regad L
Analysis of the HIV-2 protease's adaptation to various ligands: characterization of backbone asymmetry using a structural alphabet.
Scientific Reports 2018, 8, 710.

Molina-Moya B, Agonafir M, Blanco S, Dacombe R, Gomgnimbou MK, Spinasse L, Gomes-Fernandes M, Datiko DG, Edwards T, Cuevas LE, Dominguez J, Sola C
Microbead-based spoligotyping of Mycobacterium tuberculosis from Ziehl-Neelsen-stained microscopy preparations in Ethiopia..
Scientific reports 2018, 8, 3987.

Triki D, Billot T, Visseaux B, Descamps D, Flatters D, Camproux AC, Regad L
Exploration of the effect of sequence variations located inside the binding pocket of HIV-1 and HIV-2 proteases.
Scientific Reports 2018, 8, 5789.

Gschwind R, Fournier T, Butel MJ, Wydau-Dematteis S
[Microbiota establishment: an in utero colonization decisive for future health?]..
Medecine sciences : M/S 2018, 34, 331-337.

Annane D, Renault A, Brun-Buisson C, Megarbane B, Quenot JP, Siami S, Cariou A, Forceville X, Schwebel C, Martin C, Timsit JF, Misset B, Ali Benali M, Colin G, Souweine B, Asehnoune K, Mercier E, Chimot L, Charpentier C, François B, Boulain T, Petitpas F, Constantin JM, Dhonneur G, Baudin F, Combes A, Bohé J, Loriferne JF, Amathieu R, Cook F, Slama M, Leroy O, Capellier G, Dargent A, Hissem T, Maxime V, Bellissant E, CRICS-TRIGGERSEP Network
Hydrocortisone plus Fludrocortisone for Adults with Septic Shock.
The New England Journal of Medicine 2018, 378, 809-818.

Hoen B, Schaub B, Funk AL, Ardillon V, Boullard M, Cabie A, Callier C, Carles G, Cassadou S, Cesaire R, Douine M, Herrmann-Storck C, Kadhel P, Laouenan C, Madec Y, Monthieux A, Nacher M, Najioullah F, Rousset D, Ryan C, Schepers K, Stegmann-Planchard S, Tressieres B, Volumenie JL, Yassinguezo S, Janky E, Fontanet A
Pregnancy Outcomes after ZIKV Infection in French Territories in the Americas.
N Engl J Med 2018, 378, 985-994.

Combes A, Hajage D, Capellier G, Demoule A, Lavoué S, Guervilly C, Da Silva D, Zafrani L, Tirot P, Veber B, Maury E, Levy B, Cohen Y, Richard C, Kalfon P, Bouadma L, Mehdaoui H, Beduneau G, Lebreton G, Brochard L, Ferguson ND, Fan E, Slutsky AS, Brodie D, Mercat A, EOLIA Trial Group, REVA, and ECMONet
Extracorporeal Membrane Oxygenation for Severe Acute Respiratory Distress Syndrome.
The New England Journal of Medicine 2018, 378, 1965-1975.

Tenaillon O
Experimental evolution heals the scars of genome-scale recoding.
Proceedings of the National Academy of Sciences of the United States of America 2018, 115, 2853-2855.

Loubet P, Anselem O, Launay O
Immunization during pregnancy.
Expert Review of Vaccines 2018

Dussaux C, Senat MV, Bouchghoul H, Benachi A, Mandelbrot L, Kayem G
Preterm premature rupture of membranes: is home care acceptable?.
The Journal of Maternal-Fetal & Neonatal Medicine: The Official Journal of the European Association of Perinatal Medicine, the Federation of Asia and Oceania Perinatal Societies, the International Society of Perinatal Obstetricians 2018, 31, 2284-2292.

Duhil de Bénazé G, Desselas E, Houdouin V, Mariani-Kurkdjian P, Kheniche A, Dauger S, Poncelet G, Gaschignard J, Levy M
Pneumonia with pleural empyema caused by Salmonella Typhi in an immunocompetent child living in a non-endemic country..
Paediatrics and international child health 2018, 38, 227-230.

Zarrouk V, Gras J, Dubée V, de Lastours V, Lopes A, Leflon V, Allaham W, Guigui P, Fantin B
Increased mortality in patients aged 75 years or over with pyogenic vertebral osteomyelitis.
Infectious Diseases (London, England) 2018, 50, 783-787.

Guery R, Habibi A, Arlet JB, Lionnet F, de Lastours V, Decousser JW, Mainardi JL, Razazi K, Baranes L, Bartolucci P, Godeau B, Galacteros F, Michel M, Mahevas M
Severe, non specific symptoms in non-typhoidal Salmonella infections in adult patients with sickle cell disease: a retrospective multicentre study.
Infectious Diseases (London, England) 2018, 50, 822-830.

Magréault S, Grégoire N, Marchand S, Couet W
Colistin Pharmacokinetics in Pediatrics.
Clinical Infectious Diseases: An Official Publication of the Infectious Diseases Society of America 2018, 66, 809.

Raymond S, Nicot F, Pallier C, Bellecave P, Maillard A, Trabaud MA, Morand-Joubert L, Rodallec A, Amiel C, Mourez T, Bocket L, Beby-Defaux A, Bouvier-Alias M, Lambert-Niclot S, Charpentier C, Malve B, Mirand A, Dina J, Le Guillou-Guillemette H, Marque-Juillet S, Signori-Schmuck A, Barin F, Si-Mohamed A, Avettand Fenoel V, Roussel C, Calvez V, Saune K, Marcelin AG, Rodriguez C, Descamps D, Izopet J, French National Agency for Research on AIDS and Viral Hepatitis (ANRS) AC11 Resistance Study Group
Impact of Human Immunodeficiency Virus Type 1 Minority Variants on the Virus Response to a Rilpivirine-Based First-line Regimen.
Clinical Infectious Diseases: An Official Publication of the Infectious Diseases Society of America 2018, 66, 1588-1594.

Moulignier A, Savatovsky J, Assoumou L, Lescure FX, Lamirel C, Godin O, Valin N, Tubiana R, Canestri A, Roux P, Sadik JC, Salomon L, Abrivard M, Katlama C, Yazdanpanah Y, Pialoux G, Girard PM, Costagliola D, Microvascular Brain Retina and Kidney (MicroBREAK) Study Group
Silent Cerebral Small-Vessel Disease Is Twice as Prevalent in Middle-Aged Individuals With Well-Controlled, Combination Antiretroviral Therapy-Treated Human Immunodeficiency Virus (HIV) Than in HIV-Uninfected Individuals.
Clinical Infectious Diseases: An Official Publication of the Infectious Diseases Society of America 2018, 66, 1762-1769.

Arikawa S, Rollins N, Jourdain G, Humphrey J, Kourtis AP, Hoffman I, Essex M, Farley T, Coovadia HM, Gray G, Kuhn L, Shapiro R, Leroy V, Bollinger RC, Onyango-Makumbi C, Lockman S, Marquez C, Doherty T, Dabis F, Mandelbrot L, Le Coeur S, Rolland M, Joly P, Newell ML, Becquet R
Contribution of Maternal Antiretroviral Therapy and Breastfeeding to 24-Month Survival in Human Immunodeficiency Virus-Exposed Uninfected Children: An Individual Pooled Analysis of African and Asian Studies.
Clinical Infectious Diseases: An Official Publication of the Infectious Diseases Society of America 2018, 66, 1668-1677.

Andremont A
Too Early to Recommend Early Fecal Microbiota Transplantation in Patients With Severe Clostridium difficile Infection, or Not Too Early?.
Clinical Infectious Diseases: An Official Publication of the Infectious Diseases Society of America 2018, 66, 651-652.

Birgand G, Zahar JR, Lucet JC
Insight Into the Complex Epidemiology of Multidrug-Resistant Enterobacteriaceae.
Clinical Infectious Diseases: An Official Publication of the Infectious Diseases Society of America 2018, 66, 494-496.

Melliez H, Mary-Krause M, Bocket L, Guiguet M, Abgrall S, De Truchis P, Katlama C, Martin-Blondel G, Henn A, Revest M, Robineau O, Khuong-Josses MA, Canestri A, De Castro N, Joly V, Mokhtari S, Risso K, Gasnault J, Costagliola D, French Hospital Database on HIV (ANRS-C4)
Risk of Progressive Multifocal Leukoencephalopathy in the Combination Antiretroviral Therapy Era in the French Hospital Database on Human Immunodeficiency Virus (ANRS-C4).
Clinical Infectious Diseases: An Official Publication of the Infectious Diseases Society of America 2018

Peiffer-Smadja N, Hanslik T, Mordant P, Lescure FX
Cultural differences between surgical and medical teams: is it time for comanagement?.
Clinical Infectious Diseases: An Official Publication of the Infectious Diseases Society of America 2018

Argy N, Le Gal S, Coppée R, Song Z, Vindrios W, Massias L, Kao WC, Hunte C, Yazdanpanah Y, Lucet JC, Houzé S, Clain J, Nevez G
Pneumocystis Cytochrome b Mutants Associated With Atovaquone Prophylaxis Failure as the Cause of Pneumocystis Infection Outbreak Among Heart Transplant Recipients.
Clinical Infectious Diseases: An Official Publication of the Infectious Diseases Society of America 2018, 67, 913-919.

Luong Nguyen LB, Yazdanpanah Y, Maman D, Wanjala S, Vandenbulcke A, Price J, Parker RA, Hennequin W, Mendiharat P, Freedberg KA
Voluntary Community Human Immunodeficiency Virus Testing, Linkage, and Retention in Care Interventions in Kenya: Modeling the Clinical Impact and Cost-effectiveness.
Clinical Infectious Diseases: An Official Publication of the Infectious Diseases Society of America 2018, 67, 719-726.

Matheron S, Descamps D, Gallien S, Besseghir A, Sellier P, Blum L, Mortier E, Charpentier C, Tubiana R, Damond F, Peytavin G, Ponscarme D, Collin F, Brun-Vezinet F, Chene G, France REcherche Nord&Sud Sida-Hiv Hépatites (ANRS) 159 HIV-2 Trial Study Group
First-line Raltegravir/Emtricitabine/Tenofovir Combination in Human Immunodeficiency Virus Type 2 (HIV-2) Infection: A Phase 2, Noncomparative Trial (ANRS 159 HIV-2).
Clinical Infectious Diseases: An Official Publication of the Infectious Diseases Society of America 2018, 67, 1161-1167.

de Kraker MEA, Sommer H, de Velde F, Gravestock I, Weiss E, McAleenan A, Nikolakopoulos S, Amit O, Ashton T, Beyersmann J, Held L, Lovering AM, MacGowan AP, Mouton JW, Timsit JF, Wilson D, Wolkewitz M, Bettiol E, Dane A, Harbarth S, COMBACTE-NET Consortium
Optimizing the Design and Analysis of Clinical Trials for Antibacterials Against Multidrug-resistant Organisms: A White Paper From COMBACTE's STAT-Net.
Clinical Infectious Diseases: An Official Publication of the Infectious Diseases Society of America 2018, 67, 1922-1931.

Zahar JR, Blot S, Nordmann P, Martischang R, Timsit JF, Harbarth S, Barbier F
Screening for intestinal carriage of ESBL-producing Enterobacteriaceae in critically ill patients: expected benefits and evidence-based controversies.
Clinical Infectious Diseases: An Official Publication of the Infectious Diseases Society of America 2018

Kerneis C, Pasi N, Arangalage D, Nguyen V, Mathieu T, Verdonk C, Codogno I, Ou P, Duval X, Tubiana S, Cimadevilla C, Vahanian A, Messika-Zeitoun D
Ascending aorta dilatation rates in patients with tricuspid and bicuspid aortic stenosis: the COFRASA/GENERAC study.
European Heart Journal Cardiovascular Imaging 2018, 19, 792-799.

Pérez-Brocal V, Andremont A, Moya A
Isolation in small populations of Wayampi Amerindians promotes endemicity and homogenisation of their faecal virome, but its distribution is not entirely random.
FEMS microbiology ecology 2018, 94,

Ouldali N, Hugot JP, Viala J, Damir M, Martinez-Vinson C, Meinzer U
Early Arthritis Is Associated With Failure of Immunosuppressive Drugs and Severe Pediatric Crohn's Disease Evolution.
Inflammatory Bowel Diseases 2018, 24, 2423-2430.

de Gunzburg J, Ghozlane A, Ducher A, Le Chatelier E, Duval X, Ruppe E, Armand-Lefevre L, Sablier-Gallis F, Burdet C, Alavoine L, Chachaty E, Augustin V, Varastet M, Levenez F, Kennedy S, Pons N, Mentre F, Andremont A
Protection of the Human Gut Microbiome From Antibiotics.
J Infect Dis 2018, 217, 628-636.

Mariaggi AA, Péré H, Perrier M, Visseaux B, Collin G, Veyer D, Le Hingrat Q, Ferré VM, Joly V, Couvelard A, Bucau M, Davitian C, Descamps D, Abramowitz L, Charpentier C
Presence of Human Papillomavirus (HPV) Apolipoprotein B Messenger RNA Editing, Catalytic Polypeptide-Like 3 (APOBEC)-Related Minority Variants in HPV-16 Genomes From Anal and Cervical Samples but Not in HPV-52 and HPV-58.
The Journal of Infectious Diseases 2018, 218, 1027-1036.

Perrier M, Visseaux B, Landman R, Joly V, Todesco E, Yazdanpanah Y, Calvez V, Marcelin AG, Descamps D, Charpentier C
No impact of HIV-1 protease minority resistant variants on the virological response to a first-line PI-based regimen containing darunavir or atazanavir.
The Journal of Antimicrobial Chemotherapy 2018, 73, 173-176.

Seang S, Schneider L, Nguyen T, Lê MP, Soulie C, Calin R, Caby F, Valantin MA, Tubiana R, Assoumou L, Marcelin AG, Peytavin G, Katlama C
Darunavir/ritonavir monotherapy at a low dose (600/100 mg/day) in HIV-1-infected individuals with suppressed HIV viraemia.
The Journal of Antimicrobial Chemotherapy 2018, 73, 490-493.

de Truchis P, Assoumou L, Landman R, Mathez D, Le Dû D, Bellet J, Amat K, Katlama C, Gras G, Bouchaud O, Duracinsky M, Abe E, Alvarez JC, Izopet J, Saillard J, Melchior JC, Leibowitch J, Costagliola D, Girard PM, Perronne C, ANRS 162-4D Study Group
Four-days-a-week antiretroviral maintenance therapy in virologically controlled HIV-1-infected adults: the ANRS 162-4D trial.
The Journal of Antimicrobial Chemotherapy 2018, 73, 738-747.

Le Meur L, Tantet C, Lê MP, Desselas E, Bonnal C, Lillo-Le-Louet A, Sonneville R, Massias L, Giraud J, Descamps D, Yazdanpanah Y, Lariven S, Peytavin G
Serious neuropsychiatric adverse effects related to interaction between itraconazole and darunavir/ritonavir in an HIV-infected patient with cerebral histoplasmosis.
The Journal of Antimicrobial Chemotherapy 2018, 73, 1108-1110.

Pressiat C, Hirt D, Treluyer JM, Zheng Y, Morlat P, Naqvi A, Tran L, Viard JP, Avettand-Fenoel V, Rouzioux C, Meyer L, Cheret A, OPTIPRIM Study Group
Decreased darunavir concentrations during once-daily co-administration with maraviroc and raltegravir: OPTIPRIM-ANRS 147 trial.
The Journal of Antimicrobial Chemotherapy 2018

Reissier S, Saleh-Mghir A, Guerin F, Massias L, Ghout I, Sinel C, Cattoir V, Cremieux AC
In vivo daptomycin efficacy against experimental vancomycin-resistant Enterococcus faecium endocarditis.
The Journal of Antimicrobial Chemotherapy 2018, 73, 981-986.

Charpentier C, Malet I, Andre-Garnier E, Storto A, Bocket L, Amiel C, Morand-Joubert L, Tumiotto C, Nguyen T, Maillard A, Rodallec A, Leoz M, Montes B, Schneider V, Plantier JC, Dina J, Pallier C, Mirand A, Roussel C, Signori-Schmuck A, Raymond S, Calvez V, Delaugerre C, Marcelin AG, Descamps D
Phenotypic analysis of HIV-1 E157Q integrase polymorphism and impact on virological outcome in patients initiating an integrase inhibitor-based regimen.
The Journal of Antimicrobial Chemotherapy 2018, 73, 1039-1044.

Storto A, Visseaux B, Bertine M, Le Hingrat Q, Collin G, Damond F, Khuong MA, Blum L, Tubiana R, Karmochkine M, Cazanave C, Matheron S, Descamps D, Charpentier C, ANRS HIV-2 CO5 Cohort
Minority resistant variants are also present in HIV-2-infected antiretroviral-naive patients.
The Journal of Antimicrobial Chemotherapy 2018

Meynard JL, Moinot L, Landman R, Morand-Joubert L, Besseghir A, Kolta S, Spire B, Todesco E, Bouchaud O, Fagard C, Chene G, Girard PM, ANRS 140 DREAM Study Group
Week 96 efficacy of lopinavir/ritonavir monotherapy in virologically suppressed patients with HIV: a randomized non-inferiority trial (ANRS 140 DREAM).
The Journal of Antimicrobial Chemotherapy 2018

Charpentier C, Peytavin G, Lê MP, Joly V, Cabras O, Perrier M, Le Gac S, Phung B, Yazdanpanah Y, Descamps D, Landman R
High virological suppression regardless of the genotypic susceptibility score after switching to a dolutegravir-based regimen: week 48 results in an observational cohort.
The Journal of Antimicrobial Chemotherapy 2018, 73, 1665-1671.

Lambert-Niclot S, Grude M, Chaix ML, Charpentier C, Reigadas S, Le Guillou-Guillemette H, Rodallec A, Amiel C, Maillard A, Dufayard J, Mourez T, Mirand A, Guinard J, Montes B, Vallet S, Marcelin AG, Descamps D, Flandre P, Delaugerre C, Morand-Joubert L, ANRS AC-11 Resistance Group
Emerging resistance mutations in PI-naive patients failing an atazanavir-based regimen (ANRS multicentre observational study).
The Journal of Antimicrobial Chemotherapy 2018

Molina JM, Gallien S, Chaix ML, El Abbassi EM, Madelaine I, Katlama C, Valin N, Delobel P, Desseaux K, Peytavin G, Saillard J, Raffi F, Chevret S, ANRS 165 Darulight Study Group
Low-dose ritonavir-boosted darunavir in virologically suppressed HIV-1-infected adults: an open-label trial (ANRS 165 Darulight).
The Journal of Antimicrobial Chemotherapy 2018

Lê MP, Chaix ML, Chevret S, Bertrand J, Raffi F, Gallien S, El Abbassi EMB, Katlama C, Delobel P, Yazdanpanah Y, Saillard J, Molina JM, Peytavin G, ANRS 165 DARULIGHT Study Group
Pharmacokinetic modelling of darunavir/ritonavir dose reduction (800/100 to 400/100 mg once daily) in a darunavir/ritonavir-containing regimen in virologically suppressed HIV-infected patients: ANRS 165 DARULIGHT sub-study.
The Journal of Antimicrobial Chemotherapy 2018, 73, 2120-2128.

Nguyen T, Fofana DB, Lê MP, Charpentier C, Peytavin G, Wirden M, Lambert-Niclot S, Desire N, Grude M, Morand-Joubert L, Flandre P, Katlama C, Descamps D, Calvez V, Todesco E, Marcelin AG
Prevalence and clinical impact of minority resistant variants in patients failing an integrase inhibitor-based regimen by ultra-deep sequencing.
The Journal of Antimicrobial Chemotherapy 2018, 73, 2485-2492.

Alessandri-Gradt E, Charpentier C, Leoz M, Mourez T, Descamps D, Plantier JC
Impact of natural polymorphisms of HIV-1 non-group M on genotypic susceptibility to the attachment inhibitor fostemsavir.
The Journal of Antimicrobial Chemotherapy 2018

Berleur M, Guérin F, Massias L, Chau F, Poujade J, Cattoir V, Fantin B, de Lastours V
Activity of fosfomycin alone or combined with temocillin in vitro and in a murine model of peritonitis due to KPC-3- or OXA-48-producing Escherichia coli.
The Journal of Antimicrobial Chemotherapy 2018, 73, 3074-3080.

Fofana DB, d'Almeida M, Lambert-Niclot S, Peytavin G, Girard PM, Lafia B, Zohoun-Guidigbi L, Keke RK, Soulie C, Marcelin AG, Morand-Joubert L
Resistance profile and treatment outcomes in HIV-infected children at virological failure in Benin, West Africa.
The Journal of Antimicrobial Chemotherapy 2018

Dimeglio C, Raymond S, Nicot F, Jeanne N, Carcenac R, Lefebvre C, Izopet J, French National Agency for Research on AIDS and Viral Hepatitis (ANRS) AC11 Resistance Study Group
Impact of the mutational load on the virological response to a first-line rilpivirine-based regimen.
The Journal of Antimicrobial Chemotherapy 2018

Cuzin L, Pugliese P, Katlama C, Bani-Sadr F, Ferry T, Rey D, Lourenco J, Bregigeon S, Allavena C, Reynes J, Cabié A, Dat’AIDS Study Group
Integrase strand transfer inhibitors and neuropsychiatric adverse events in a large prospective cohort.
The Journal of Antimicrobial Chemotherapy 2018

Pommelet V, Mariani P, Basmaci R, Tourdjman M, Morin L, Gaschignard J, de Lauzanne A, Lemaitre C, Bonacorsi S, Faye A
Enteric fever among children: 50 cases in a French tertiary care centre.
Journal of Travel Medicine 2018, 25,

Gachet B, Elbaz A, Boucher A, Robineau O, Fréalle E, Ajana F, Delannoy PY, Thellier D, Boussekey N, Meybeck A, Senneville E
Acute toxoplasmosis in an immunocompetent traveller to Senegal..
Journal of travel medicine 2018, 25,

Marin J, Hedges SB
Undersampling Genomes has Biased Time and Rate Estimates Throughout the Tree of Life..
Molecular biology and evolution 2018, 35, 2077-2084.

Mabileau G, Scutelniciuc O, Tsereteli M, Konorazov I, Yelizaryeva A, Popovici S, Saifuddin K, Losina E, Manova M, Saldanha V, Malkin JE, Yazdanpanah Y
Intervention Packages to Reduce the Impact of HIV and HCV Infections Among People Who Inject Drugs in Eastern Europe and Central Asia: A Modeling and Cost-effectiveness Study.
Open Forum Infectious Diseases 2018, 5, ofy040.

Cazals N, Le Hingrat Q, Abraham B, Da Silva P, Guindre L, Goffart S, Damond F, Visseaux B, Charpentier C, Ranger-Rogez S, Descamps D
HIV-2 Primary Infection in a French 69-Year-Old Bisexual Man.
Open Forum Infectious Diseases 2018, 5, ofy223.

Chaix ML, Charreau I, Pintado C, Delaugerre C, Mahjoub N, Cotte L, Capitant C, Raffi F, Cua E, Pialoux G, Tremblay C, Meyer L, Molina JM, ANRS IPERGAY Study Group
Effect of On-Demand Oral Pre-exposure Prophylaxis With Tenofovir/Emtricitabine on Herpes Simplex Virus-1/2 Incidence Among Men Who Have Sex With Men: A Substudy of the ANRS IPERGAY Trial.
Open Forum Infectious Diseases 2018, 5, ofy295.

Berges A, Cerou M, Sahota T, Liefaard L, Ambery C, Zamuner S, Chen C, Hénin E
Time-to-event modelling of left- or right- censored toxicity data in non-clinical drug toxicology.
Toxicological Sciences: An Official Journal of the Society of Toxicology 2018

La Combe B, Mahérault AC, Messika J, Billard-Pomares T, Branger C, Landraud L, Dreyfuss D, Dib F, Massias L, Ricard JD
Oropharyngeal Bacterial Colonization after Chlorhexidine Mouthwash in Mechanically Ventilated Critically Ill Patients.
Anesthesiology 2018, 129, 1140-1148.

Messika J, Schmidt M, Aubry A, Combes A, Ricard JD
Extracorporeal Membrane Oxygenation-Associated Infections: Carefully Consider Cannula Infections!.
Critical Care Medicine 2018, 46, e171-e172.

Frat JP, Ragot S, Coudroy R, Constantin JM, Girault C, Prat G, Boulain T, Demoule A, Ricard JD, Razazi K, Lascarrou JB, Devaquet J, Mira JP, Argaud L, Chakarian JC, Fartoukh M, Nseir S, Mercat A, Brochard L, Robert R, Thille AW, REVA network
Predictors of Intubation in Patients With Acute Hypoxemic Respiratory Failure Treated With a Noninvasive Oxygenation Strategy.
Critical Care Medicine 2018, 46, 208-215.

Dananché C, Vanhems P, Machut A, Aupée M, Bervas C, L'Hériteau F, Lepape A, Lucet JC, Stoeckel V, Timsit JF, Berger-Carbonne A, Savey A, Bénet T, Healthcare-Associated Infections (HAIs) Surveillance Network of ICUs (Réseau REA-Raisin)
Trends of Incidence and Risk Factors of Ventilator-Associated Pneumonia in Elderly Patients Admitted to French ICUs Between 2007 and 2014.
Critical Care Medicine 2018, 46, 869-877.

Joseph A, Rafat C, Zafrani L, Mariani-Kurkdjian P, Veyradier A, Hertig A, Rondeau E, Mariotte E, Azoulay E
Early Differentiation of Shiga Toxin-Associated Hemolytic Uremic Syndrome in Critically Ill Adults With Thrombotic Microangiopathy Syndromes..
Critical care medicine 2018, 46, e904-e911.

Sommer H, Timsit JF, von Cube M, Schumacher M, Darmon M, Schwebel C, Ruckly S, Wolkewitz M, COMBACTE-MAGNET Consortium
The Impact of Early Adequate Treatment on Extubation and Discharge Alive of Patients With Pseudomonas aeruginosa-Related Ventilator-Associated Pneumonia.
Critical Care Medicine 2018, 46, 1643-1648.

Gros A, Dupuis C, Ruckly S, Lautrette A, Garrouste-Orgeas M, Gainnier M, Forel JM, Marcotte G, Azoulay E, Cohen Y, Schwebel C, Argaud L, de Montmollin E, Siami S, Goldgran-Toledano D, Darmon M, Timsit JF, OUTCOMEREA Study Group
Association Between Body Weight Variation and Survival and Other Adverse Events in Critically Ill Patients With Shock: A Multicenter Cohort Study of the OUTCOMEREA Network.
Critical Care Medicine 2018, 46, e981-e987.

Vidal-Petiot E, Joseph A, Resche-Rigon M, Boutten A, Mullaert J, d' Ortho MP, Vrtovsnik F, Steg PG, Flamant M
External validation and comparison of formulae estimating 24-h sodium intake from a fasting morning urine sample.
Journal of Hypertension 2018, 36, 785-792.

Rybak A, Levy C, Bonacorsi S, Béchet S, Vié le Sage F, Elbez A, Varon E, Cohen R
Antibiotic Resistance of Potential Otopathogens Isolated From Nasopharyngeal Flora of Children With Acute Otitis Media Before, During and After Pneumococcal Conjugate Vaccines Implementation.
The Pediatric Infectious Disease Journal 2018, 37, e72-e78.

Gaschignard J, Hassani N, El Sissy C, Bonacorsi S, Dauger S, Chomton M, Taha MK, Levy M
Delayed Generalized Necrotic Purpuric Rash in a C6-deficient 12-year-old Girl Treated for Group W Meningococcal Disease.
The Pediatric Infectious Disease Journal 2018, 37, 1014-1015.

Gaschignard J, Meinzer U
Predictors of Intravenous Immunoglobulin Nonresponse and Racial Disparities in Kawasaki Disease..
The Pediatric infectious disease journal 2018, 37, e279-e280.

Limosin F, Belhadi D, Comet D, Pacou M, Bouju S, Van Impe K, Guillon P
Comparison of Paliperidone Palmitate and Risperidone Long-Acting Injection in Schizophrenic Patients: Results From a Multicenter Retrospective Cohort Study in France.
Journal of Clinical Psychopharmacology 2018, 38, 19-26.

Prat D, Messika J, Millereux M, Gouezel C, Hamzaoui O, Demars N, Jacobs F, Trouiller P, Ricard JD, Sztrymf B
Constipation in critical care patients: both timing and duration matter.
European Journal of Gastroenterology & Hepatology 2018, 30, 1003-1008.

de Léotoing L, Yazdanpanah Y, Finkielsztejn L, Chaize G, Vainchtock A, Nachbaur G, Aubin C, Bonnet F
Costs associated with hospitalization in HIV-positive patients in France.
AIDS (London, England) 2018, 32, 2059-2066.

Champenois K, Seng R, Persoz A, Essat A, Gaud C, Laureillard D, Robineau O, Duvivier C, Yazdanpanah Y, Goujard C, Meyer L, ANRS PRIMO cohort study group
Calendar trends in sexual behaviours in a cohort of HIV-infected MSM at the era of treatment as prevention of HIV infection.
AIDS (London, England) 2018, 32, 1871-1879.

Colin De Verdiere N, Durier C, Samri A, Meiffredy V, Launay O, Matheron S, Mercier-Delarue S, Even S, Aboulker JP, Molina JM, Autran B, Simon F, and the ANRS EP46 NOVAA Group
Immunogenicity and safety of yellow fever vaccine in HIV-1-infected patients: ANRS EP46 NOVAA.
AIDS (London, England) 2018

Benhammou V, Tubiana R, Matheron S, Sellier P, Mandelbrot L, Chenadec JL, Marel E, Khoshnood B, Warszawski J, ANRS CO1/CO11-EPF French Perinatal Cohort study group
HBV or HCV Coinfection in HIV-1-Infected Pregnant Women in France: Prevalence and Pregnancy Outcomes.
Journal of Acquired Immune Deficiency Syndromes (1999) 2018, 77, 439-450.

Costagliola D, Potard V, Lang S, Abgrall S, Duvivier C, Fischer H, Joly V, Lacombe JM, Valantin MA, Mary-Krause M, Rozenberg S, FHDH ANRS CO4
Impact of antiretroviral drugs on fracture risk in HIV-infected individuals: A case-control study nested within the French Hospital Database on HIV (FHDH-ANRS CO4).
Journal of Acquired Immune Deficiency Syndromes (1999) 2018

Marin J, Rapacciuolo G, Costa GC, Graham CH, Brooks TM, Young BE, Radeloff VC, Behm JE, Helmus MR, Hedges SB
Evolutionary time drives global tetrapod diversity..
Proceedings. Biological sciences 2018, 285,

Limelette A, Giusti D, Anuset D, Beaupuis C, Jacquier H, De Champs C, Bani-Sadr F, Guillard T, N'Guyen Y
Amoxicillin-tolerant Pasteurella multocida strain isolated from chronic dermohypodermitis after suboptimal exposure to amoxicillin is not associated with reduced growth rate.
Journal of Medical Microbiology 2018

Rafat C, Messika J, Barnaud G, Dufour N, Magdoud F, Billard-Pomarès T, Gaudry S, Dreyfuss D, Branger C, Decré D, Ricard JD
Hypervirulent Klebsiella pneumoniae, a 5-year study in a French ICU.
Journal of Medical Microbiology 2018, 67, 1083-1089.

Beghain J, Bridier-Nahmias A, Le Nagard H, Denamur E, Clermont O
ClermonTyping: an easy-to-use and accurate in silico method for Escherichia genus strain phylotyping.
Microbial Genomics 2018, 4, e000192.

Branger C, Ledda A, Billard-Pomares T, Doublet B, Fouteau S, Barbe V, Roche D, Cruveiller S, Médigue C, Castellanos M, Decré D, Drieux-Rouze L, Clermont O, Glodt J, Tenaillon O, Cloeckaert A, Arlet G, Denamur E
Extended-spectrum β-lactamase-encoding genes are spreading on a wide range of Escherichia coli plasmids existing prior to the use of third-generation cephalosporins.
Microbial Genomics 2018

Royer G, Decousser JW, Branger C, Dubois M, Médigue C, Denamur E, Vallenet D
PlaScope: a targeted approach to assess the plasmidome from genome assemblies at the species level.
Microbial Genomics 2018

Linard M, Blondel B, Estellat C, Deneux-Tharaux C, Luton D, Oury JF, Schmitz T, Mandelbrot L, Azria E, PreCARE study group
Association between inadequate antenatal care utilisation and severe perinatal and maternal morbidity: an analysis in the PreCARE cohort.
BJOG: an international journal of obstetrics and gynaecology 2018, 125, 587-595.

Pilmis B, Garcia-Hermoso D, Alanio A, Catherinot E, Scemla A, Jullien V, Bretagne S, Lortholary O
Failure of voriconazole therapy due to acquired azole resistance in Aspergillus fumigatus in a kidney transplant recipient with chronic necrotizing aspergillosis.
American Journal of Transplantation: Official Journal of the American Society of Transplantation and the American Society of Transplant Surgeons 2018, 18, 2352-2355.

Fourati S, Guedj J, Chevaliez S, Nguyen THT, Roudot-Thoraval F, Ruiz I, Soulier A, Scoazec G, Varaut A, Poiteau L, Francois M, Mallat A, Hézode C, Pawlotsky JM
Viral kinetics analysis and virological characterization of treatment failures in patients with chronic hepatitis C treated with sofosbuvir and an NS5A inhibitor.
Alimentary Pharmacology & Therapeutics 2018, 47, 665-673.

Provoost A, Dramé M, Cotte L, Cuzin L, Garraffo R, Rey D, Raffi F, Poizot-Martin I, Pugliese P, Bani-Sadr F, Dat'AIDS study group
Risk of diabetes in HIV-infected patients is associated with cirrhosis but not with chronic HCV coinfection in a French nationwide HIV cohort.
Alimentary Pharmacology & Therapeutics 2018

Brunet-Possenti F, Charpentier C, Collin G, Descamps D, Descamps V
Impact of anti-interleukin-17 treatment on cutaneous and genital human papillomavirus infection.
The British Journal of Dermatology 2018, 179, 1179-1180.

Pouga L, Mercedes Santoro M, Charpentier C, Di Carlo D, Romeo I, Artese A, Alcaro S, Antinori A, Wirden M, Perno CF, Ambrosio FA, Calvez V, Descamps D, Marcelin AG, Ceccherini-Silberstein F, Lambert-Niclot S
New Resistance Mutations to Nucleoside Reverse Transcriptase Inhibitors at Codon 184 of HIV-1 Reverse Transcriptase (M184L and M184T).
Chemical Biology & Drug Design 2018

Beaudreuil S, Schermann JM, Verstuyft C, Barrail-Tran A, Smirnova M, Durrbach A, Becquemont L
Differential pharmacokinetic interaction of cyclosporine and tacrolimus with colchicine in renal allograft recipients.
Clinical Transplantation 2018, 32, e13405.

Kreyling J, Schweiger AH, Bahn M, Ineson P, Migliavacca M, Morel-Journel T, Christiansen JR, Schtickzelle N, Larsen KS
To replicate, or not to replicate - that is the question: how to tackle nonlinear responses in ecological experiments.
Ecology Letters 2018, 21, 1629-1638.

Migrant Health Working Group for the Collaboration of Observational HIV Epidemiological Research in Europe (COHERE) in EuroCoord
Immunological and virological response to antiretroviral treatment in migrant and native men and women in Western Europe; is benefit equal for all?.
HIV medicine 2018, 19, 42-48.

Cuzin L, Yazdanpanah Y, Huleux T, Cotte L, Pugliese P, Allavena C, Reynes J, Poizot-Martin I, Bani-Sadr F, Delpierre C, Dat'AIDS Study Group
No relationship between late HIV diagnosis and social deprivation in newly diagnosed patients in France.
HIV medicine 2018, 19, 238-242.

Rosenthal E, Fougerou-Leurent C, Renault A, Carrieri MP, Marcellin F, Garraffo R, Teicher E, Aumaitre H, Lacombe K, Bailly F, Billaud E, Chevaliez S, Dominguez S, Valantin MA, Reynes J, Naqvi A, Cotte L, Metivier S, Leroy V, Dupon M, Allegre T, De Truchis P, Jeantils V, Chas J, Salmon-Ceron D, Morlat P, Neau D, Perré P, Piroth L, Pol S, Bourlière M, Pageaux GP, Alric L, Zucman D, Girard PM, Poizot-Martin I, Yazdanpanah Y, Raffi F, Pabic EL, Tual C, Pailhé A, Amri I, Bellissant E, Molina JM, ANRS HC31 SOFTRIH Study Group
Efficacy, safety and patient-reported outcomes of ledipasvir/sofosbuvir in NS3/4A protease inhibitor-experienced individuals with hepatitis C virus genotype 1 and HIV coinfection with and without cirrhosis (ANRS HC31 SOFTRIH study).
HIV medicine 2018, 19, 227-237.

Hentzien M, Cabie A, Pugliese P, Billaud É, Poizot-Martin I, Duvivier C, Valantin MA, Kaladjian A, Dramé M, Bani-Sadr F, Dat'AIDS Study Group
Factors associated with deaths from suicide in a French nationwide HIV-infected cohort.
HIV medicine 2018

Gallien S, Massetti M, Flandre P, Leleu H, Descamps D, Lazaro E
Comparison of 48-week efficacies of elvitegravir/cobicistat/emtricitabine/tenofovir alafenamide and nucleoside/nucleotide reverse transcriptase inhibitor-sparing regimens: a systematic review and network meta-analysis.
HIV medicine 2018

Nassereddine H, Charpentier C, Bucau M, Joly V, Bienvenu L, Davitian C, Abramowitz L, Benabderrahmane D, Kotelevets L, Chastre E, Lehy T, Walker F
Interest of cytology combined with Xpert® HPV and Anyplex® II HPV28 Detection human papillomavirus (HPV) typing: differential profiles of anal and cervical HPV lesions in HIV-infected patients on antiretroviral therapy.
HIV medicine 2018

Miralles A, Marin J, Markus D, Herrel A, Hedges SB, Vidal N
Molecular evidence for the paraphyly of Scolecophidia and its evolutionary implications..
Journal of evolutionary biology 2018, 31, 1782-1793.

Papatheodoridis GV, Hatzakis A, Cholongitas E, Baptista-Leite R, Baskozos I, Chhatwal J, Colombo M, Cortez-Pinto H, Craxi A, Goldberg D, Gore C, Kautz A, Lazarus JV, Mendão L, Peck-Radosavljevic M, Razavi H, Schatz E, Tözün N, van Damme P, Wedemeyer H, Yazdanpanah Y, Zuure F, Manns MP
Hepatitis C: The beginning of the end-key elements for successful European and national strategies to eliminate HCV in Europe.
Journal of Viral Hepatitis 2018, 25 Suppl 1, 6-17.

Cousien A, Tran VC, Deuffic-Burban S, Jauffret-Roustide M, Mabileau G, Dhersin JS, Yazdanpanah Y
Effectiveness and cost-effectiveness of interventions targeting harm reduction and chronic hepatitis C cascade of care in people who inject drugs: The case of France.
Journal of Viral Hepatitis 2018, 25, 1197-1207.

Sellier PO, Maylin S, Brichler S, Berçot B, Lopes A, Chopin D, Pogliaghi M, Munier AL, Delcey V, Simoneau G, Evans J, Gordien E, Simon F, Bergmann JF
Hepatitis B Virus-Hepatitis D Virus mother-to-child co-transmission: A retrospective study in a developed country.
Liver International: Official Journal of the International Association for the Study of the Liver 2018, 38, 611-618.

Gras J, De Castro N, Montlahuc C, Champion L, Scemla A, Matignon M, Lachâtre M, Raskine L, Grall N, Peraldi MN, Molina JM
Clinical characteristics, risk factors, and outcome of tuberculosis in kidney transplant recipients: A multicentric case-control study in a low-endemic area.
Transplant Infectious Disease: An Official Journal of the Transplantation Society 2018, 20, e12943.

Miguel Montanes R, Elkrief L, Hajage D, Houssel P, Fantin B, Francoz C, Dreyfuss D, Ricard JD, Durand F
An outbreak of Pneumocytis jirovecii pneumonia among liver transplant recipients..
Transplant infectious disease : an official journal of the Transplantation Society 2018, 20, e12956.

Desroches M, Clermont O, Lafeuillade B, Rodriguez C, Darty M, Royer G, Bouvet O, Ounnoughene N, Noizat-Pirenne F, Denamur E, Decousser JW
Genotypic and phenotypic characteristics of Escherichia coli involved in transfusion-transmitted bacterial infections: implications for preventive strategies.
Transfusion 2018, 58, 1940-1950.

El Meouche I, Dunlop MJ
Heterogeneity in efflux pump expression predisposes antibiotic-resistant cells to mutation.
Science (New York, N.Y.) 2018, 362, 686-690.

Birgy A, Madhi F, Hogan J, Doit C, Gaschignard J, Caseris M, Bidet P, Cohen R, Bonacorsi S
CTX-M-55-, MCR-1-, and FosA-Producing Multidrug-Resistant Escherichia coli Infection in a Child in France.
Antimicrobial Agents and Chemotherapy 2018, 62,

Danion F, Jullien V, Rouzaud C, Abdel Fattah M, Lapusan S, Guéry R, Bigé N, Morgand M, Pallet N, Lanternier F, Lortholary O
Is It Time for Systematic Voriconazole Pharmacogenomic Investigation for Central Nervous System Aspergillosis?.
Antimicrobial Agents and Chemotherapy 2018, 62, e00705-18.

Burdet C, Sayah-Jeanne S, Nguyen TT, Hugon P, Sablier-Gallis F, Saint-Lu N, Corbel T, Ferreira S, Pulse M, Weiss W, Andremont A, Mentré F, de Gunzburg J
Antibiotic-Induced Dysbiosis Predicts Mortality in an Animal Model of Clostridium difficile Infection.
Antimicrobial Agents and Chemotherapy 2018, 62, e00925-18.

Cointe A, Bonacorsi S, Truong J, Hobson C, Doit C, Monjault A, Bidet P, Birgy A
Detection of Carbapenemase-Producing Enterobacteriaceae in Positive Blood Culture Using an Immunochromatographic RESIST-4 O.K.N.V. Assay.
Antimicrobial Agents and Chemotherapy 2018, 62,

Launay M, Roux A, Beaumont L, Douvry B, Lecuyer L, Douez E, Picard C, Grenet D, Jullien V, Boussaud V, Guillemain R, Billaud EM
Posaconazole Tablets in Real-Life Lung Transplantation: Impact on Exposure, Drug-Drug Interactions, and Drug Management in Lung Transplant Patients, Including Those with Cystic Fibrosis.
Antimicrobial Agents and Chemotherapy 2018, 62, e02061-17.

Ali AM, Penny MA, Smith TA, Workman L, Sasi P, Adjei GO, Aweeka F, Kiechel JR, Jullien V, Rijken MJ, McGready R, Mwesigwa J, Kristensen K, Stepniewska K, Tarning J, Barnes KI, Denti P, WWARN Amodiaquine PK Study Group
Population Pharmacokinetics of the Antimalarial Amodiaquine: a Pooled Analysis To Optimize Dosing.
Antimicrobial Agents and Chemotherapy 2018, 62, e02193-17.

Ghalayini M, Launay A, Bridier-Nahmias A, Clermont O, Denamur E, Lescat M, Tenaillon O
Evolution of a Dominant Natural Isolate of Escherichia coli in the Human Gut over the Course of a Year Suggests a Neutral Evolution with Reduced Effective Population Size.
Applied and Environmental Microbiology 2018, 84, e02377-17.

Rouzaud C, Rodriguez-Nava V, Catherinot E, Méchaï F, Bergeron E, Farfour E, Scemla A, Poirée S, Delavaud C, Mathieu D, Durupt S, Larosa F, Lengelé JP, Christophe JL, Suarez F, Lortholary O, Lebeaux D
Clinical Assessment of a Nocardia PCR-Based Assay for Diagnosis of Nocardiosis.
Journal of Clinical Microbiology 2018, 56,

Caméléna F, Cointe A, Mathy V, Hobson C, Doit C, Bercot B, Decré D, Podglajen I, Dortet L, Monjault A, Bidet P, Bonacorsi S, Birgy A
Within-a-Day Detection and Rapid Characterization of Carbapenemase by Use of a New Carbapenem Inactivation Method-Based Test, CIMplus.
Journal of Clinical Microbiology 2018, 56,

Jary A, Leducq V, Palich R, Gothland A, Descamps D, Joly V, Lambert-Niclot S, Amiel C, Canestri A, Mirand A, Gault E, Vabret A, Valantin MA, Katlama C, Calvez V, Dupin N, Spano JP, Marcelin AG
Usefulness of Kaposi's Sarcoma-Associated Herpesvirus (KSHV) DNA Viral Load in Whole Blood for Diagnosis and Monitoring of KSHV-Associated Diseases.
Journal of Clinical Microbiology 2018, 56,

Basmaci R, Bidet P, Mallet C, Vialle R, Bonacorsi S
Distribution of Kingella kingae Capsular Serotypes in France Assessed by a Multiplex PCR Assay on Osteoarticular Samples.
Journal of Clinical Microbiology 2018, 56,

Wydau-Dematteis S, El Meouche I, Courtin P, Hamiot A, Lai-Kuen R, Saubaméa B, Fenaille F, Butel MJ, Pons JL, Dupuy B, Chapot-Chartier MP, Peltier J
Cwp19 Is a Novel Lytic Transglycosylase Involved in Stationary-Phase Autolysis Resulting in Toxin Release in Clostridium difficile.
mBio 2018

Desroches M, Royer G, Roche D, Mercier-Darty M, Vallenet D, Médigue C, Bastard K, Rodriguez C, Clermont O, Denamur E, Decousser JW
The Odyssey of the Ancestral Escherich Strain through Culture Collections: an Example of Allopatric Diversification.
mSphere 2018

Geslain G, Bourgade C, Chomton M, Le Bourgeois F
Methicillin-sensible Staphylococcus aureus causing endocarditis, with cerebral and orthopaedic complications, in a 17-month-old child with no risk factor..
BMJ case reports 2018, 2018, bcr-2018-226388.

Ricard JD, Dib F, Esposito-Farese M, Messika J, Girault C, REVA network
Comparison of high flow nasal cannula oxygen and conventional oxygen therapy on ventilatory support duration during acute-on-chronic respiratory failure: study protocol of a multicentre, randomised, controlled trial. The 'HIGH-FLOW ACRF' study.
BMJ open 2018, 8, e022983.

Burdet C, Loubet P, Le Moing V, Vindrios W, Esposito-Farèse M, Linard M, Ferry T, Massias L, Tattevin P, Wolff M, Vandenesch F, Grall N, Quintin C, Mentré F, Duval X, Lescure FX, CloCeBa study group
Efficacy of cloxacillin versus cefazolin for methicillin-susceptible Staphylococcus aureus bacteraemia (CloCeBa): study protocol for a randomised, controlled, non-inferiority trial.
BMJ open 2018, 8, e023151.

Thille AW, Muller G, Gacouin A, Coudroy R, Demoule A, Sonneville R, Beloncle F, Girault C, Dangers L, Lautrette A, Cabasson S, Rouzé A, Vivier E, Le Meur A, Ricard JD, Razazi K, Barberet G, Lebert C, Ehrmann S, Picard W, Bourenne J, Pradel G, Bailly P, Terzi N, Buscot M, Lacave G, Danin PE, Nanadoumgar H, Gibelin A, Zanre L, Deye N, Ragot S, Frat JP, REVA research network
High-flow nasal cannula oxygen therapy alone or with non-invasive ventilation during the weaning period after extubation in ICU: the prospective randomised controlled HIGH-WEAN protocol.
BMJ open 2018, 8, e023772.

Kirchgesner J, Beaugerie L, Carrat F, Andersen NN, Jess T, Schwarzinger M, BERENICE study group
Increased risk of acute arterial events in young patients and severely active IBD: a nationwide French cohort study.
Gut 2018, 67, 1261-1268.

Januel E, Martin-Blondel G, Lamirel C, Picard H, Pialoux G, Katlama C, Cochereau I, Lescure FX, Moulignier A
Do CCR5 antagonists improve the overall survival of patients with AIDS-related progressive multifocal leucoencephalopathy?.
Journal of Neurology, Neurosurgery, and Psychiatry 2018, 89, 1125-1126.

Haviari S, You B, Tod M
In Silico Evaluation of Pharmacokinetic Optimization for Antimitogram-Based Clinical Trials.
Cancer Research 2018, 78, 1873-1882.

Pellat A, Dreyer C, Couffignal C, Walter T, Lombard-Bohas C, Niccoli P, Seitz JF, Hentic O, André T, Coriat R, Faivre S, Zappa M, Ruszniewski P, Pote N, Couvelard A, Raymond E
Clinical and Biomarker Evaluations of Sunitinib in Patients with Grade 3 Digestive Neuroendocrine Neoplasms.
Neuroendocrinology 2018, 107, 24-31.

Le Joncour A, Soudet S, Dupont A, Espitia O, Koskas F, Cluzel P, Hatron PY, Emmerich J, Cacoub P, Resche-Rigon M, Lambert M, Saadoun D, French Buerger's Network
Long-Term Outcome and Prognostic Factors of Complications in Thromboangiitis Obliterans (Buerger's Disease): A Multicenter Study of 224 Patients.
Journal of the American Heart Association 2018, 7, e010677.

Messika J, Gaudry S, Tubach F, Guillo S, Dreyfuss D, Hajage D, Ricard JD
Underreporting of End-of-Life Decisions in Critical Care Trials: A Call to Modify the Consolidated Standards of Reporting Trials Statement.
American Journal of Respiratory and Critical Care Medicine 2018, 197, 263-266.

Gaudry S, Hajage D, Schortgen F, Martin-Lefevre L, Verney C, Pons B, Boulet E, Boyer A, Chevrel G, Lerolle N, Carpentier D, de Prost N, Lautrette A, Bretagnol A, Mayaux J, Nseir S, Megarbane B, Thirion M, Forel JM, Maizel J, Yonis H, Markowicz P, Thiery G, Tubach F, Ricard JD, Dreyfuss D
Timing of Renal Support and Outcome of Septic Shock and Acute Respiratory Distress Syndrome. A Post Hoc Analysis of the AKIKI Randomized Clinical Trial.
American Journal of Respiratory and Critical Care Medicine 2018, 198, 58-66.

Petit C, Samson A, Morita S, Ursino M, Guedj J, Jullien V, Comets E, Zohar S
Unified approach for extrapolation and bridging of adult information in early-phase dose-finding paediatric studies.
Statistical Methods in Medical Research 2018, 27, 1860-1877.

Re JM, Dean S, Mullaert J, Guedeney A, Menahem S
Maternal Distress and Infant Social Withdrawal (ADBB) Following Infant Cardiac Surgery for Congenital Heart Disease.
World Journal for Pediatric & Congenital Heart Surgery 2018, 9, 624-637.

Mawet J, Valade D, Vigan M, Laouenan C, Roos C
Oxygen delivered by a high flow concentrator for the treatment of medication-overuse headache: A prospective open-labeled pilot feasibility study.
Cephalalgia Reports 2018, 1, 2515816318810196.

van Ingen J, Aksamit T, Andrejak C, Böttger EC, Cambau E, Daley CL, Griffith DE, Guglielmetti L, Holland SM, Huitt GA, Koh WJ, Lange C, Leitman P, Marras TK, Morimoto K, Olivier KN, Santin M, Stout JE, Thomson R, Tortoli E, Wallace RJ, Winthrop KL, Wagner D, for NTM-NET
Treatment outcome definitions in nontuberculous mycobacterial pulmonary disease: an NTM-NET consensus statement.
The European Respiratory Journal 2018, 51,

Moreau AS, Martin-Loeches I, Povoa P, Salluh J, Rodriguez A, Thille AW, Diaz Santos E, Vedes E, Lobo SM, Mégarbane B, Molero Silvero E, Coelho L, Argaud L, Sanchez Iniesta R, Labreuche J, Rouzé A, Nseir S
Impact of immunosuppression on incidence, aetiology and outcome of ventilator-associated lower respiratory tract infections..
The European respiratory journal 2018, 51, 1701656.

Bleibtreu A, Jaureguiberry S, Houhou N, Boutolleau D, Guillot H, Vallois D, Lucet JC, Robert J, Mourvillier B, Delemazure J, Jaspard M, Lescure FX, Rioux C, Caumes E, Yazdanapanah Y
Clinical management of respiratory syndrome in patients hospitalized for suspected Middle East respiratory syndrome coronavirus infection in the Paris area from 2013 to 2016.
BMC infectious diseases 2018, 18, 331.

Mieras LF, Taal AT, van Brakel WH, Cambau E, Saunderson PR, Smith WCS, Prakoeswa CRS, Astari L, Scollard DM, do Nascimento DC, Grosset J, Kar HK, Izumi S, Gillini L, Virmond MCL, Sturkenboom MGG
An enhanced regimen as post-exposure chemoprophylaxis for leprosy: PEP+.
BMC infectious diseases 2018, 18, 506.

Flateau C, Le Bel J, Tubiana S, Blanc FX, Choquet C, Rammaert B, Ray P, Rapp C, Ficko C, Leport C, Claessens YE, Duval X, ESCAPED study group
High heterogeneity in community-acquired pneumonia inclusion criteria: does this impact on the validity of the results of randomized controlled trials?.
BMC infectious diseases 2018, 18, 607.

Day MJ, Spiteri G, Jacobsson S, Woodford N, Amato-Gauci AJ, Cole MJ, Unemo M, Euro-GASP network
Stably high azithromycin resistance and decreasing ceftriaxone susceptibility in Neisseria gonorrhoeae in 25 European countries, 2016.
BMC infectious diseases 2018, 18, 609.

Darlington M, Carbonne B, Mailloux A, Brossard Y, Levy-Mozziconacci A, Cortey A, Maoulida H, Simon T, Rousseau A, Durand-Zaleski I, GENIFERH1 Study Group
Effectiveness and costs of non-invasive foetal RHD genotyping in rhesus-D negative mothers: a French multicentric two-arm study of 850 women.
BMC pregnancy and childbirth 2018, 18, 496.

Canivet C, Gourgou-Bourgade S, Napoléon B, Palazzo L, Flori N, Guibert P, Piessen G, Farges-Bancel D, Seitz JF, Assenat E, Vendrely V, Truant S, Vanbiervliet G, Berthelémy P, Garcia S, Gomez-Brouchet A, Buscail L, Bournet B, BACAP Consortium
A prospective clinical and biological database for pancreatic adenocarcinoma: the BACAP cohort.
BMC cancer 2018, 18, 986.

Hounkonnou C, Djènontin A, Egbinola S, Houngbegnon P, Bouraima A, Soares C, Fievet N, Accrombessi M, Yovo E, Briand V, Cottrell G
Impact of the use and efficacy of long lasting insecticidal net on malaria infection during the first trimester of pregnancy - a pre-conceptional cohort study in southern Benin.
BMC public health 2018, 18, 683.

Tanaka S, Geneve C, Tebano G, Grall N, Piednoir P, Bronchard R, Godement M, Atchade E, Augustin P, Mal H, Castier Y, Montravers P, Desmard M
Morbidity and mortality related to pneumonia and TRACHEOBRONCHITIS in ICU after lung transplantation.
BMC pulmonary medicine 2018, 18, 43.

Andrade LF, Saba G, Ricard JD, Messika J, Gaillat J, Bonnin P, Chidiac C, Illes HG, Laurichesse H, Detournay B, Petitpretz P, de Pouvourville G
Health related quality of life in patients with community-acquired pneumococcal pneumonia in France.
Health and Quality of Life Outcomes 2018, 16, 28.

Chbeir D, Gaschignard J, Bonnefoy R, Beyler C, Melki I, Faye A, Meinzer U
Kawasaki disease: abnormal initial echocardiogram is associated with resistance to IV Ig and development of coronary artery lesions.
Pediatric Rheumatology Online Journal 2018, 16,

Désiré N, Cerutti L, Le Hingrat Q, Perrier M, Emler S, Calvez V, Descamps D, Marcelin AG, Hué S, Visseaux B
Characterization update of HIV-1 M subtypes diversity and proposal for subtypes A and D sub-subtypes reclassification.
Retrovirology 2018, 15, 80.

Khediri Z, Vauloup-Fellous C, Benachi A, Ayoubi JM, Mandelbrot L, Picone O
Adverse effects of maternal enterovirus infection on the pregnancy outcome: a prospective and retrospective pilot study.
Virology Journal 2018, 15, 70.

Hilgers RD, Bogdan M, Burman CF, Dette H, Karlsson M, König F, Male C, Mentré F, Molenberghs G, Senn S
Lessons learned from IDeAl - 33 recommendations from the IDeAl-net about design and analysis of small population clinical trials.
Orphanet Journal of Rare Diseases 2018, 13, 77.

Friede T, Posch M, Zohar S, Alberti C, Benda N, Comets E, Day S, Dmitrienko A, Graf A, Günhan BK, Hee SW, Lentz F, Madan J, Miller F, Ondra T, Pearce M, Röver C, Toumazi A, Unkel S, Ursino M, Wassmer G, Stallard N
Recent advances in methodology for clinical trials in small populations: the InSPiRe project.
Orphanet Journal of Rare Diseases 2018, 13, 186.

Alqarni A, Kantor E, Grall N, Tanaka S, Zappella N, Godement M, Ribeiro-Parenti L, Tran-Dinh A, Montravers P
Clinical characteristics and prognosis of bacteraemia during postoperative intra-abdominal infections.
Critical Care (London, England) 2018, 22, 175.

Abe T, Madotto F, Pham T, Nagata I, Uchida M, Tamiya N, Kurahashi K, Bellani G, Laffey JG, LUNG-SAFE Investigators and the ESICM Trials Group
Epidemiology and patterns of tracheostomy practice in patients with acute respiratory distress syndrome in ICUs across 50 countries.
Critical Care (London, England) 2018, 22, 195.

Cantier M, Morisot A, Guérot E, Megarbane B, Razazi K, Contou D, Mariotte E, Canet E, De Montmollin E, Dubée V, Boulet E, Gaudry S, Voiriot G, Mayaux J, Pène F, Neuville M, Mourvillier B, Ruckly S, Bouadma L, Wolff M, Timsit JF, Sonneville R, ENCEPHALITICA study group
Functional outcomes in adults with tuberculous meningitis admitted to the ICU: a multicenter cohort study.
Critical Care (London, England) 2018, 22, 210.

Mebazaa A, Geven C, Hollinger A, Wittebole X, Chousterman BG, Blet A, Gayat E, Hartmann O, Scigalla P, Struck J, Bergmann A, Antonelli M, Beishuizen A, Constantin JM, Damoisel C, Deye N, Di Somma S, Dugernier T, François B, Gaudry S, Huberlant V, Lascarrou JB, Marx G, Mercier E, Oueslati H, Pickkers P, Sonneville R, Legrand M, Laterre PF, AdrenOSS-1 study investigators
Circulating adrenomedullin estimates survival and reversibility of organ failure in sepsis: the prospective observational multinational Adrenomedullin and Outcome in Sepsis and Septic Shock-1 (AdrenOSS-1) study.
Critical Care (London, England) 2018, 22, 354.

Rambaud J, Lidouren F, Sage M, Kohlhauer M, Nadeau M, Fortin-Pellerin É, Micheau P, Zilberstein L, Mongardon N, Ricard JD, Terada M, Bruneval P, Berdeaux A, Ghaleh B, Walti H, Tissier R
Hypothermic total liquid ventilation after experimental aspiration-associated acute respiratory distress syndrome.
Annals of Intensive Care 2018, 8, 57.

Jean-Baptiste S, Messika J, Hajage D, Gaudry S, Barbieri J, Duboc H, Dreyfuss D, Coffin B, Ricard JD
Clinical impact of upper gastrointestinal endoscopy in critically ill patients with suspected bleeding.
Annals of Intensive Care 2018, 8, 75.

SRLF Trial Group
Impact of oversedation prevention in ventilated critically ill patients: a randomized trial-the AWARE study.
Annals of Intensive Care 2018, 8, 93.

Truche AS, Ragey SP, Souweine B, Bailly S, Zafrani L, Bouadma L, Clec'h C, Garrouste-Orgeas M, Lacave G, Schwebel C, Guebre-Egziabher F, Adrie C, Dumenil AS, Zaoui P, Argaud L, Jamali S, Goldran Toledano D, Marcotte G, Timsit JF, Darmon M
ICU survival and need of renal replacement therapy with respect to AKI duration in critically ill patients.
Annals of Intensive Care 2018, 8, 127.

Goulas A, Livoreil B, Grall N, Benoit P, Couderc-Obert C, Dagot C, Patureau D, Petit F, Laouénan C, Andremont A
What are the effective solutions to control the dissemination of antibiotic resistance in the environment? A systematic review protocol.
Environmental Evidence 2018, 7, 3.

Birgand G, Castro-Sánchez E, Hansen S, Gastmeier P, Lucet JC, Ferlie E, Holmes A, Ahmad R
Comparison of governance approaches for the control of antimicrobial resistance: Analysis of three European countries.
Antimicrobial Resistance and Infection Control 2018, 7, 28.

Bougnoux ME, Brun S, Zahar JR
Healthcare-associated fungal outbreaks: New and uncommon species, New molecular tools for investigation and prevention.
Antimicrobial Resistance and Infection Control 2018, 7, 45.

Lanza VF, Baquero F, Martínez JL, Ramos-Ruíz R, González-Zorn B, Andremont A, Sánchez-Valenzuela A, Ehrlich SD, Kennedy S, Ruppé E, van Schaik W, Willems RJ, de la Cruz F, Coque TM
In-depth resistome analysis by targeted metagenomics.
Microbiome 2018, 6, 11.

Buatois S, Ueckert S, Frey N, Retout S, Mentré F
Comparison of Model Averaging and Model Selection in Dose Finding Trials Analyzed by Nonlinear Mixed Effect Models.
The AAPS journal 2018, 20, 56.

Rudant J, Dupont A, Mikaeloff Y, Bolgert F, Coste J, Weill A
Surgery and risk of Guillain-Barré syndrome: A French nationwide epidemiologic study.
Neurology 2018, 91, e1220-e1227.

Angers-Loustau A, Petrillo M, Bengtsson-Palme J, Berendonk T, Blais B, Chan KG, Coque TM, Hammer P, Heß S, Kagkli DM, Krumbiegel C, Lanza VF, Madec JY, Naas T, O'Grady J, Paracchini V, Rossen JWA, Ruppé E, Vamathevan J, Venturi V, Van den Eede G
The challenges of designing a benchmark strategy for bioinformatics pipelines in the identification of antimicrobial resistance determinants using next generation sequencing technologies.
F1000Research 2018

Guedj J, Piorkowski G, Jacquot F, Madelain V, Nguyen THT, Rodallec A, Gunther S, Carbonnelle C, Mentre F, Raoul H, de Lamballerie X
Antiviral efficacy of favipiravir against Ebola virus: A translational study in cynomolgus macaques.
PLoS Med 2018, 15, e1002535.

Coldiron ME, Assao B, Page AL, Hitchings MDT, Alcoba G, Ciglenecki I, Langendorf C, Mambula C, Adehossi E, Sidikou F, Tassiou EI, De Lastours V, Grais RF
Single-dose oral ciprofloxacin prophylaxis as a response to a meningococcal meningitis epidemic in the African meningitis belt: A 3-arm, open-label, cluster-randomized trial.
PLoS medicine 2018, 15, e1002593.

Molina-Moya B, Gomgnimbou MK, Spinasse L, Obasanya J, Oladimeji O, Dacombe R, Edwards T, Daragon XO, Lawson L, Abdurrahman ST, Cuevas LE, Dominguez J, Sola C
Mycobacterium tuberculosis complex genotypes circulating in Nigeria based on spoligotyping obtained from Ziehl-Neelsen stained slides extracted DNA..
PLoS neglected tropical diseases 2018, 12, e0006242.

Roux D, Schaefers M, Clark BS, Weatherholt M, Renaud D, Scott D, LiPuma JJ, Priebe G, Gerard C, Yoder-Himes DR
A putative lateral flagella of the cystic fibrosis pathogen Burkholderia dolosa regulates swimming motility and host cytokine production.
PloS One 2018, 13, e0189810.

Devillers L, Sicsic J, Delbarre A, Le Bel J, Ferrat E, Saint Lary O
General Practitioner trainers prescribe fewer antibiotics in primary care: Evidence from France.
PloS One 2018, 13, e0190522.

Madhi F, Jung C, Timsit S, Levy C, Biscardi S, Lorrot M, Grimprel E, Hees L, Craiu I, Galerne A, Dubos F, Cixous E, Hentgen V, Béchet S, Urinary-tract Infection due to Extended-Spectrum Beta-lactamase–producing Enterobacteriaceae in Children Group, Bonacorsi S, Cohen R
Febrile urinary-tract infection due to extended-spectrum beta-lactamase-producing Enterobacteriaceae in children: A French prospective multicenter study.
PloS One 2018, 13, e0190910.

Perrier M, Désiré N, Storto A, Todesco E, Rodriguez C, Bertine M, Le Hingrat Q, Visseaux B, Calvez V, Descamps D, Marcelin AG, Charpentier C
Evaluation of different analysis pipelines for the detection of HIV-1 minority resistant variants.
PloS One 2018, 13, e0198334.

Eyraud D, Suner L, Dupont A, Bachelot-Loza C, Smadja DM, Helley D, Bertil S, Gostian O, Szymezak J, Loncar Y, Puybasset L, Lebray P, Vezinet C, Vaillant JC, Granger B, Gaussem P
Evolution of platelet functions in cirrhotic patients undergoing liver transplantation: A prospective exploration over a month.
PloS One 2018, 13, e0200364.

Sanneh B, Kebbeh A, Jallow HS, Camara Y, Mwamakamba LW, Ceesay IF, Barrow E, Sowe FO, Sambou SM, Baldeh I, Jallow A, Jorge Raul MA, Andremont A
Prevalence and risk factors for faecal carriage of Extended Spectrum β-lactamase producing Enterobacteriaceae among food handlers in lower basic schools in West Coast Region of The Gambia.
PloS One 2018, 13, e0200894.

Allavena C, Hanf M, Rey D, Duvivier C, BaniSadr F, Poizot-Martin I, Jacomet C, Pugliese P, Delobel P, Katlama C, Joly V, Chidiac C, Dournon N, Merrien D, May T, Reynes J, Gagneux-Brunon A, Chirouze C, Huleux T, Cabié A, Raffi F, Dat’AIDS study group
Antiretroviral exposure and comorbidities in an aging HIV-infected population: The challenge of geriatric patients.
PloS One 2018, 13, e0203895.

de Monteynard LA, Matheron S, Grabar S, de Truchis P, Gilquin J, Pavie J, Launay O, Meynard JL, Khuong-Josses MA, Rey D, Mahamat A, Dray-Spira R, Simon A, Costagliola D, Abgrall S, FHDH-ANRS CO4
Influence of geographic origin on AIDS and serious non-AIDS morbidity/mortality during cART among heterosexual HIV-infected men and women in France.
PloS One 2018, 13, e0205385.

Kayem G, Doloy A, Schmitz T, Chitrit Y, Bouhanna P, Carbonne B, Jouannic JM, Mandelbrot L, Benachi A, Azria E, Maillard F, Fenollar F, Poyart C, Bebear C, Goffinet F
Antibiotics for amniotic-fluid colonization by Ureaplasma and/or Mycoplasma spp. to prevent preterm birth: A randomized trial.
PloS One 2018, 13, e0206290.

Arrive E, Viard JP, Salanave B, Dollfus C, Matheron S, Reliquet V, Arezes E, Nailler L, Vigouroux C, Warszawski J, ANRS CO19 COVERTE and ENNS study groups
Metabolic risk factors in young adults infected with HIV since childhood compared with the general population.
PloS One 2018, 13, e0206745.

Lorme F, Maataoui N, Rondinaud E, Esposito-Farèse M, Clermont O, Ruppe E, Arlet G, Genel N, VOYAG-R study group, Matheron S, Andremont A, Armand-Lefevre L
Acquisition of plasmid-mediated cephalosporinase producing Enterobacteriaceae after a travel to the tropics.
PloS One 2018, 13, e0206909.

Ingelbeen B, Bruyand M, Mariani-Kurkjian P, Le Hello S, Danis K, Sommen C, Bonacorsi S, de Valk H
Emerging Shiga-toxin-producing Escherichia coli serogroup O80 associated hemolytic and uremic syndrome in France, 2013-2016: Differences with other serogroups.
PloS One 2018, 13, e0207492.

El Meouche I, Peltier J
Toxin release mediated by the novel autolysin Cwp19 in Clostridium difficile.
Microbial Cell (Graz, Austria) 2018, 5, 421-423.

Pilmis B, Zahar JR
Ventilator-associated pneumonia related to ESBL-producing gram negative bacilli.
Annals of Translational Medicine 2018, 6, 424.

Messika J, La Combe B, Ricard JD
Oropharyngeal colonization: epidemiology, treatment and ventilator-associated pneumonia prevention.
Annals of Translational Medicine 2018, 6, 426.

Molina-Moya B, Abdurrahman ST, Madukaji LI, Gomgnimbou MK, Spinasse L, Gomes-Fernandes M, Gomes HM, Kacimi S, Dacombe R, Bimba JS, Lawson L, Sola C, Cuevas LE, Dominguez J
Genetic characterization of Mycobacterium tuberculosis complex isolates circulating in Abuja, Nigeria..
Infection and drug resistance 2018, 11, 1617-1625.

Geslain G, Guellec I, Guedj R, Guilbert J, Jean S, Valentin C, Demoulin M, Soreze Y, Carbajal R, Leger PL, Rambaud J
Incidence and risk factors of ventilator-associated pneumonia in neonatal intensive care unit: a first French study..
Minerva anestesiologica 2018, 84, 829-835.

Poncin T, Fouere S, Braille A, Camelena F, Agsous M, Bebear C, Kumanski S, Lot F, Mercier-Delarue S, Ngangro NN, Salmona M, Schnepf N, Timsit J, Unemo M, Bercot B
Multidrug-resistant Neisseria gonorrhoeae failing treatment with ceftriaxone and doxycycline in France, November 2017.
Euro Surveillance: Bulletin Europeen Sur Les Maladies Transmissibles = European Communicable Disease Bulletin 2018, 23,

Golparian D, Rose L, Lynam A, Mohamed A, Bercot B, Ohnishi M, Crowley B, Unemo M
Multidrug-resistant Neisseria gonorrhoeae isolate, belonging to the internationally spreading Japanese FC428 clone, with ceftriaxone resistance and intermediate resistance to azithromycin, Ireland, August 2018.
Euro Surveillance: Bulletin Europeen Sur Les Maladies Transmissibles = European Communicable Disease Bulletin 2018, 23,

Fournier S, Desenfant L, Monteil C, Nion-Huang M, Richard C, Jarlier V, The Ap-Hp Outbreaks Control Group
Efficiency of different control measures for preventing carbapenemase-producing enterobacteria and glycopeptide-resistant Enterococcus faecium outbreaks: a 6-year prospective study in a French multihospital institution, January 2010 to December 2015.
Euro Surveillance: Bulletin Europeen Sur Les Maladies Transmissibles = European Communicable Disease Bulletin 2018, 23,

Rossi B, Gasperini ML, Leflon-Guibout V, Gioanni A, de Lastours V, Rossi G, Dokmak S, Ronot M, Roux O, Nicolas-Chanoine MH, Fantin B, Lefort A
Hypervirulent Klebsiella pneumoniae in Cryptogenic Liver Abscesses, Paris, France.
Emerging Infectious Diseases 2018, 24, 221-229.

Cointe A, Birgy A, Mariani-Kurkdjian P, Liguori S, Courroux C, Blanco J, Delannoy S, Fach P, Loukiadis E, Bidet P, Bonacorsi S
Emerging Multidrug-Resistant Hybrid Pathotype Shiga Toxin-Producing Escherichia coli O80 and Related Strains of Clonal Complex 165, Europe.
Emerging Infectious Diseases 2018, 24, 2262-2269.

Rasigade JP, Leclère A, Alla F, Tessier A, Bes M, Lechiche C, Vernet-Garnier V, Laouénan C, Vandenesch F, Leport C, AEPEI Study Group
Staphylococcus aureus CC30 Lineage and Absence of sed,j,r-Harboring Plasmid Predict Embolism in Infective Endocarditis.
Frontiers in Cellular and Infection Microbiology 2018, 8, 187.

Quintela BdM, Conway JM, Hyman JM, Guedj J, Dos Santos RW, Lobosco M, Perelson AS
A New Age-Structured Multiscale Model of the Hepatitis C Virus Life-Cycle During Infection and Therapy With Direct-Acting Antiviral Agents.
Frontiers in Microbiology 2018, 9, 601.

Moreau K, Clemenceau A, Le Moing V, Messika-Zeitoun D, Andersen PS, Bruun NE, Skov RL, Couzon F, Bouchiat C, Erpelding ML, van Belkum A, Bossé Y, Duval X, Vandenesch F, French VIRSTA-AEPEI, COFRASA Study Groups, Danish DANSAB Study Group
Human Genetic Susceptibility to Native Valve Staphylococcus aureus Endocarditis in Patients With S. aureus Bacteremia: Genome-Wide Association Study.
Frontiers in Microbiology 2018, 9, 640.

Nicolas-Chanoine MH, Mayer N, Guyot K, Dumont E, Pagès JM
Interplay Between Membrane Permeability and Enzymatic Barrier Leads to Antibiotic-Dependent Resistance in Klebsiella Pneumoniae.
Frontiers in Microbiology 2018, 9, 1422.

Lazarevic V, Gaïa N, Girard M, Leo S, Cherkaoui A, Renzi G, Emonet S, Jamme S, Ruppé E, Vijgen S, Rubbia-Brandt L, Toso C, Schrenzel J
When Bacterial Culture Fails, Metagenomics Can Help: A Case of Chronic Hepatic Brucelloma Assessed by Next-Generation Sequencing.
Frontiers in Microbiology 2018, 9, 1566.

Gangneux JP, Cornet M, Bailly S, Fradin C, Féger C, Timsit JF, Leroy O, Sendid B, Bougnoux ME
Clinical Impact of Antifungal Susceptibility, Biofilm Formation and Mannoside Expression of Candida Yeasts on the Outcome of Invasive Candidiasis in ICU: An Ancillary Study on the Prospective AmarCAND2 Cohort.
Frontiers in Microbiology 2018, 9, 2907.

Machado D, Lecorche E, Mougari F, Cambau E, Viveiros M
Insights on Mycobacterium leprae Efflux Pumps and Their Implications in Drug Resistance and Virulence.
Frontiers in Microbiology 2018, 9, 3072.

Pinot J, Rigal L, Granger B, Sidorkiewicz S, Jaury P
Tailored-Dose Baclofen in the Management of Alcoholism: A Retrospective Study of 144 Outpatients Followed for 3 Years in a French General Practice.
Frontiers in Psychiatry 2018, 9, 486.

Ségéral O, Nerrienet E, Neth S, Spire B, Khol V, Ferradini L, Sarun S, Mom C, Ngin S, Charpentier C, Men P, Mora M, Mean Chhi V, Ly P, Saphonn V
Positive Virological Outcomes of HIV-Infected Patients on Protease Inhibitor-Based Second-Line Regimen in Cambodia: The ANRS 12276 2PICAM Study.
Frontiers in Public Health 2018, 6, 63.

Charpentier C, Descamps D
Resistance to HIV Integrase Inhibitors: About R263K and E157Q Mutations.
Viruses 2018, 10,

Todesco E, Mazzola A, Akhavan S, Abravanel F, Poynard T, Roque-Afonso AM, Peytavin G, Marcelin AG, Calmus Y, Lecuyer L, Guillemain R, Conti F
Chronic hepatitis E in a heart transplant patient: sofosbuvir and ribavirin regimen not fully effective.
Antiviral Therapy 2018

Fournier C, Cittée J, Brugerolles H, Faury E, Bourgeois I, Le Bel J, Dorsa Figueiredo M, Traynard PY
[Improving the complementarity of patient education proposals: Experience feedback and recommendations].
Sante Publique (Vandoeuvre-Les-Nancy, France) 2018, 30, 307-311.

Salmon D, Trimoulet P, Gilbert C, Solas C, Lafourcade E, Chas J, Piroth L, Lacombe K, Katlama C, Peytavin G, Aumaitre H, Alric L, Boué F, Morlat P, Poizot-Martin I, Billaud E, Rosenthal E, Naqvi A, Miailhes P, Bani-Sadr F, Esterle L, Carrieri P, Dabis F, Sogni P, Wittkop L, ANRS CO13 Hepavih study Group
Factors associated with DAA virological treatment failure and resistance-associated substitutions description in HIV/HCV coinfected patients.
World Journal of Hepatology 2018, 10, 856-866.

Ouldali N, Rybak A, Cohen R
[Allergy to penicillin in children: what reality and when to give up amoxicillin ?].
La Revue Du Praticien 2018, 68, 355-358.

 2017                                                                            

Khoo S, Peytavin G, Burger D, Hill A, Brown K, Moecklinghoff C, La Porte C, Hadacek MB
Pharmacokinetics and Safety of Darunavir/Ritonavir in HIV-Infected Pregnant Women.
AIDS reviews 2017, 19, 16-23.

Koskas P, Henry-Feugeas MC, Feugeas JP, Ou P, Drunat O
Factors Of Rapid Cognitive Decline In Late Onset Alzheimer's Disease.
Current Aging Science 2017

Lascarrou JB, Boisrame-Helms J, Bailly A, Le Thuaut A, Kamel T, Mercier E, Ricard JD, Lemiale V, Colin G, Mira JP, Meziani F, Messika J, Dequin PF, Boulain T, Azoulay E, Champigneulle B, Reignier J, Clinical Research in Intensive Care and Sepsis (CRICS) Group
Video Laryngoscopy vs Direct Laryngoscopy on Successful First-Pass Orotracheal Intubation Among ICU Patients: A Randomized Clinical Trial.
JAMA 2017, 317, 483-493.

Ursino M, Zohar S, Lentz F, Alberti C, Friede T, Stallard N, Comets E
Dose-finding methods for Phase I clinical trials using pharmacokinetics in small populations.
Biometrical Journal. Biometrische Zeitschrift 2017, 59, 804-825.

Gantner P, Mélard A, Damond F, Delaugerre C, Dina J, Gueudin M, Maillard A, Sauné K, Rodallec A, Tuaillon E, Plantier JC, Rouzioux C, Avettand-Fenoel V, ANRS-AC11 Quantification Working Group
Interlaboratory quality control of total HIV-1 DNA load measurement for multicenter reservoir studies.
Journal of Medical Virology 2017, 89, 2047-2050.

Nguyen TH, Mouksassi MS, Holford N, Al-Huniti N, Freedman I, Hooker AC, John J, Karlsson MO, Mould DR, Perez Ruixo JJ, Plan EL, Savic R, van Hasselt JG, Weber B, Zhou C, Comets E, Mentre F
Model Evaluation of Continuous Data Pharmacometric Models: Metrics and Graphics.
CPT Pharmacometrics Syst Pharmacol 2017, 6, 87-109.

Bizzotto R, Comets E, Smith G, Yvon F, Kristensen NR, Swat MJ
PharmML in Action: an Interoperable Language for Modeling and Simulation.
CPT: pharmacometrics & systems pharmacology 2017, 6, 651-665.

Smith MK, Moodie SL, Bizzotto R, Blaudez E, Borella E, Carrara L, Chan P, Chenel M, Comets E, Gieschke R, Harling K, Harnisch L, Hartung N, Hooker AC, Karlsson MO, Kaye R, Kloft C, Kokash N, Lavielle M, Lestini G, Magni P, Mari A, Mentré F, Muselle C, Nordgren R, Nyberg HB, Parra-Guillén ZP, Pasotti L, Rode-Kristensen N, Sardu ML, Smith GR, Swat MJ, Terranova N, Yngman G, Yvon F, Holford N, DDMoRe consortium
Model Description Language (MDL): A Standard for Modeling and Simulation.
CPT: pharmacometrics & systems pharmacology 2017, 6, 647-650.

Sonneville R, Gimenez L, Labreuche J, Smonig R, Magalhaes E, Bouadma L, Timsit JF, Mazighi M
What is the prognosis of acute stroke patients requiring ICU admission?.
Intensive Care Medicine 2017, 43, 271-272.

Capuzzo M, Garrouste-Orgeas M, Martin-Loeches I
What were you able to do in your daily life? Performance status for the critically ill patient.
Intensive Care Medicine 2017, 43, 104-106.

Kentish-Barnes N, Chevret S, Champigneulle B, Thirion M, Souppart V, Gilbert M, Lesieur O, Renault A, Garrouste-Orgeas M, Argaud L, Venot M, Demoule A, Guisset O, Vinatier I, Troché G, Massot J, Jaber S, Bornstain C, Gaday V, Robert R, Rigaud JP, Cinotti R, Adda M, Thomas F, Calvet L, Galon M, Cohen-Solal Z, Cariou A, Azoulay E, Famirea Study Group
Effect of a condolence letter on grief symptoms among relatives of patients who died in the ICU: a randomized clinical trial.
Intensive Care Medicine 2017, 43, 473-484.

Hadjaj Y, Roux D, Justet A, Berquier G
Intra-alveolar hemorrhages due to left heart dysfunction and calcified constrictive pericarditis.
Intensive Care Medicine 2017, 43, 929.

Dreyfuss D, Gaudry S, Madotto F, Laffey JG
Some remaining important questions after LUNG SAFE : Discussion of "Potentially modifiable factors contributing to outcome from acute respiratory distress syndrome: the LUNG SAFE study".
Intensive Care Medicine 2017, 43, 598-599.

Bassetti M, Garnacho-Montero J, Calandra T, Kullberg B, Dimopoulos G, Azoulay E, Chakrabarti A, Kett D, Leon C, Ostrosky-Zeichner L, Sanguinetti M, Timsit JF, Richardson MD, Shorr A, Cornely OA
Intensive care medicine research agenda on invasive fungal infection in critically ill patients.
Intensive Care Medicine 2017, 43, 1225-1238.

Cambau E, Durand-Zaleski I, Bretagne S, Brun-Buisson C, Cordonnier C, Duval X, Herwegh S, Pottecher J, Courcol R, Bastuji-Garin S, EVAMICA study team
Performance and economic evaluation of the molecular detection of pathogens for patients with severe infections: the EVAMICA open-label, cluster-randomised, interventional crossover trial.
Intensive Care Medicine 2017, 43, 1613-1625.

Poulakou G, Matthaiou DK, Bassetti M, Erdem H, Dimopoulos G, Curcio DJ, Carlet J, Lipman J, Timsit JF, Giamarellou H, Arfaras-Melainis A, Rello J, ESGCIP Investigators
"Salvage treatment" for infections by extensively- and pan-drug-resistant pathogens is common and often sub-optimal.
Intensive Care Medicine 2017, 43, 1164-1166.

Timsit JF, de Kraker MEA, Sommer H, Weiss E, Bettiol E, Wolkewitz M, Nikolakopoulos S, Wilson D, Harbarth S, COMBACTE-NET consortium
Appropriate endpoints for evaluation of new antibiotic therapies for severe infections: a perspective from COMBACTE's STAT-Net.
Intensive Care Medicine 2017, 43, 1002-1012.

Sonneville R, de Montmollin E, Poujade J, Garrouste-Orgeas M, Souweine B,