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Rémi Gschwind | IAME
Rémi Gschwind Position: Contract researcher / Post-doc Affiliation: Inserm
Team: EVREST

Publications

Cefiderocol resistance genes identified in environmental samples using functional metagenomics

2026

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The ISME journal

Gschwind R et al.Gschwind R, Bonnet M, Abramova A, Jarquín-Díaz VH, Wenne M, Löber U, Godron N, Kampouris ID, Tskhay F, Nahid F, Debroucker C, Bui-Hai M, El Aiba I, Klümper U, Berendonk TU, Forslund-Startceva SK, Zahra R, Bengtsson-Palme J, Ruppé E

Pre-existing β-lactamase gene diversity is associated with lower risk of ESBL-producing Enterobacterales colonization in patients exposed to ceftriaxone

2026

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Gut Microbes

Le Bastard Q et al.Le Bastard Q, Gschwind R, Lao J, Vibet MA, Batard E, Corvec S, Montassier E, Ruppé E

IncC plasmid genome rearrangements influence the vertical and horizontal transmission tradeoff in Escherichia coli

2024

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Antimicrobial Agents and Chemotherapy

Allain M et al.Allain M, Morel-Journel T, Condamine B, Gibeaux B, Gachet B, Gschwind R, Denamur E, Landraud L

Inter-phylum circulation of a beta-lactamase-encoding gene: a rare but observable event

2024

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Antimicrobial Agents and Chemotherapy

Gschwind R et al.Gschwind R, Petitjean M, Fournier C, Lao J, Clermont O, Nordmann P, Mellmann A, Denamur E, Poirel L, Ruppé E

ResFinderFG v2.0: a database of antibiotic resistance genes obtained by functional metagenomics

2023

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Nucleic Acids Research

Gschwind R et al.Gschwind R, Ugarcina Perovic S, Weiss M, Petitjean M, Lao J, Coelho LP, Ruppé E

Towards monitoring of antimicrobial resistance in the environment: For what reasons, how to implement it, and what are the data needs?

2023

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Environment International

Bengtsson-Palme J et al.Bengtsson-Palme J, Abramova A, Berendonk TU, Coelho LP, Forslund SK, Gschwind R, Heikinheimo A, Jarquín-Díaz VH, Khan AA, Klümper U, Löber U, Nekoro M, Osińska AD, Ugarcina Perovic S, Pitkänen T, Rødland EK, Ruppé E, Wasteson Y, Wester AL, Zahra R

Oropharyngeal and intestinal concentrations of opportunistic pathogens are independently associated with death of SARS-CoV-2 critically ill adults

2022

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Critical Care (London, England)

Patrier J et al.Patrier J, Villageois-Tran K, Szychowiak P, Ruckly S, Gschwind R, Wicky PH, Gueye S, Armand-Lefevre L, Marzouk M, Sonneville R, Bouadma L, Petitjean M, Lamara F, de Montmollin E, Timsit JF, Ruppé E, French COVID Cohort Study Group

Endocarditis caused by Thalassospira sp

2021

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IDCases

Deconinck L et al.Deconinck L, Gschwind R, Petitjean M, Gueye S, Leflon-Guibout V, Maataoui N, Rondinaud E, Suard A, Gallais K, Richaud R, Fuchs A, Iung B, Alkhoder S, Ismaël S, Herrou J, Prié H, Armand-Lefèvre L, d'Humières C, Ruppé E

Evaluation of SARS-CoV-2 in semen, seminal plasma, and spermatozoa pellet of COVID-19 patients in the acute stage of infection

2021

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PloS One

Delaroche L et al.Delaroche L, Bertine M, Oger P, Descamps D, Damond F, Genauzeau E, Meicler P, Le Hingrat Q, Lamazou F, Gschwind R, Ruppé E, Visseaux B

Evidence for contamination as the origin for bacteria found in human placenta rather than a microbiota.

2020

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PloS one

Gschwind R et al.Gschwind R, Fournier T, Kennedy S, Tsatsaris V, Cordier AG, Barbut F, Butel MJ, Wydau-Dematteis S

[Microbiota establishment: an in utero colonization decisive for future health?].

2018

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Medecine sciences : M/S

Gschwind R et al.Gschwind R, Fournier T, Butel MJ, Wydau-Dematteis S